ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 341 2e-90
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 341 2e-90
3emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 341 2e-90
4emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 341 2e-90
5gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 50 0.008
6gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 48 0.032
7gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putat... 46 0.12
8gb|CP000249.1| Frankia sp. CcI3, complete genome 46 0.12
9gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 0.12
10ref|NM_210889.1| Eremothecium gossypii AFL013Wp (AFL013W), mRNA 46 0.12
11dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.49
12gb|AE005088.1| Halobacterium sp. NRC-1 section 119 of 170 of the... 44 0.49
13gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.49
14gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocycli... 42 1.9
15gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.9
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
17gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
18emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 42 1.9
19gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
20gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.9
21emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 1.9
22gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.9
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
24dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.9
27dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
28dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
29emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris comp... 42 1.9
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
31gb|M73789.1|STMXYLAB Streptomyces rubiginosus xylose kinase and ... 42 1.9
32ref|XM_466770.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
33ref|NM_197244.1| Oryza sativa (japonica cultivar-group) hypothet... 40 7.7
34ref|NM_190626.1| Oryza sativa (japonica cultivar-group), predic... 40 7.7
35gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.7
36gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
37gb|AY658729.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.7
38gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
39gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 7.7
40gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
41gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's H... 40 7.7
42emb|Y13732.1|AEY13732 Alcaligenes eutrophus genes for ureases, u... 40 7.7
43gb|CP000088.1| Thermobifida fusca YX, complete genome 40 7.7
44emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.7
45emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.7
46emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 7.7
47emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.7
48emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.7
49gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.7
50dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
51dbj|AB210815.1| Oncorhynchus mykiss rtCYP19a gene for cytochrome... 40 7.7
52gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.7
53gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete g... 40 7.7
54gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.7
55gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.7
56gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 7.7
57dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
58dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
60dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
61gb|AF274288.1|AF274288 Culex nigripalpus baculovirus clone 19 pu... 40 7.7
62dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
63gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 o... 40 7.7
64ref|XM_341100.2| PREDICTED: Rattus norvegicus Unc-51 like kinase... 40 7.7
65gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomycet... 40 7.7
66dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
67gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 7.7
68dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
69dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
70dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
71dbj|AK120867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
72dbj|AK111828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
73dbj|AK100337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
74dbj|AK071217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
75ref|NM_207848.1| Eremothecium gossypii AAL047Cp (AAL047C), mRNA 40 7.7
76emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.7
77gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.7
78gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.7
79gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.7
80gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.7
81gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
82gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 7.7
83gb|AC122387.3| Mus musculus BAC clone RP24-76F22 from 6, complet... 40 7.7
84dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7

>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score =  341 bits (172), Expect = 2e-90
 Identities = 324/374 (86%), Gaps = 3/374 (0%)
 Strand = Plus / Minus

                                                                         
Query: 99    cggacgccgccggcgtcggcgtcacctacggcaggcgtgcgacgagcctcccgccgccgg 158
             |||| |||| ||||||||||||||||||||||| ||| | ||||| | | ||||||||||
Sbjct: 57162 cggatgccggcggcgtcggcgtcacctacggcatgcgggggacgaccatgccgccgccgg 57103

                                                                         
Query: 159   ccgacgtcgcgcggttcctcgcccgcggcaccgtcctcgaccgcgtgaggctcctgaacg 218
             |||||||||||||||||||| |||||| |||| || ||||||||||  |||| ||| |||
Sbjct: 57102 ccgacgtcgcgcggttcctctcccgcgacaccatcttcgaccgcgtccggctgctggacg 57043

                                                                         
Query: 219   ccgacccgctcgccctgcgggccttcgccggcatgggcctcgccgtggacgtcaccgtcc 278
             ||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 57042 ccgacccgcgcgcgctgcgggccttcgccggcaccggcctcgccgtggacgtcaccgtcc 56983

                                                                         
Query: 279   cgaacgccctcgtgccgcgcatcgccgacagcgttgccttcgcgcggcgatgggtgcgcg 338
             | ||||||  ||| |||||| |||||| ||||   || | ||||||||| ||||||||||
Sbjct: 56982 ccaacgccgacgttccgcgcctcgccgccagccgcgcgtccgcgcggcggtgggtgcgcg 56923

                                                                         
Query: 339   ccagcgtcgcgccccacgtcgcggccgggaccaacgtgtcgcggatcctcgtgggcaggg 398
             |||||||||||||  |||  | ||||   |||||||| |||||| ||||||| |||   |
Sbjct: 56922 ccagcgtcgcgccgtacgcggaggcc---accaacgtctcgcgggtcctcgtcggcgacg 56866

                                                                         
Query: 399   acgtgatctcgcaggccaaccggacgctgctgctctgcctcgtgccggccatgcagaacc 458
             | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 56865 aggtgatctcgcaggccaaccggacgctgctgctcagcctcgtgccggccatgcggaacc 56806

                           
Query: 459   tgcacacggcgctg 472
             ||||| ||||||||
Sbjct: 56805 tgcacgcggcgctg 56792



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 513   cgcactccctcggcgtcctcgccgtgtccacgccgccgtccgccgggcggttcc 566
             |||| ||||||||| |||| |||| ||||||||||||||| |||||||||||||
Sbjct: 56736 cgcattccctcggcatcctggccgcgtccacgccgccgtcggccgggcggttcc 56683



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  341 bits (172), Expect = 2e-90
 Identities = 324/374 (86%), Gaps = 3/374 (0%)
 Strand = Plus / Minus

                                                                            
Query: 99       cggacgccgccggcgtcggcgtcacctacggcaggcgtgcgacgagcctcccgccgccgg 158
                |||| |||| ||||||||||||||||||||||| ||| | ||||| | | ||||||||||
Sbjct: 34851049 cggatgccggcggcgtcggcgtcacctacggcatgcgggggacgaccatgccgccgccgg 34850990

                                                                            
Query: 159      ccgacgtcgcgcggttcctcgcccgcggcaccgtcctcgaccgcgtgaggctcctgaacg 218
                |||||||||||||||||||| |||||| |||| || ||||||||||  |||| ||| |||
Sbjct: 34850989 ccgacgtcgcgcggttcctctcccgcgacaccatcttcgaccgcgtccggctgctggacg 34850930

                                                                            
Query: 219      ccgacccgctcgccctgcgggccttcgccggcatgggcctcgccgtggacgtcaccgtcc 278
                ||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 34850929 ccgacccgcgcgcgctgcgggccttcgccggcaccggcctcgccgtggacgtcaccgtcc 34850870

                                                                            
Query: 279      cgaacgccctcgtgccgcgcatcgccgacagcgttgccttcgcgcggcgatgggtgcgcg 338
                | ||||||  ||| |||||| |||||| ||||   || | ||||||||| ||||||||||
Sbjct: 34850869 ccaacgccgacgttccgcgcctcgccgccagccgcgcgtccgcgcggcggtgggtgcgcg 34850810

                                                                            
Query: 339      ccagcgtcgcgccccacgtcgcggccgggaccaacgtgtcgcggatcctcgtgggcaggg 398
                |||||||||||||  |||  | ||||   |||||||| |||||| ||||||| |||   |
Sbjct: 34850809 ccagcgtcgcgccgtacgcggaggcc---accaacgtctcgcgggtcctcgtcggcgacg 34850753

                                                                            
Query: 399      acgtgatctcgcaggccaaccggacgctgctgctctgcctcgtgccggccatgcagaacc 458
                | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 34850752 aggtgatctcgcaggccaaccggacgctgctgctcagcctcgtgccggccatgcggaacc 34850693

                              
Query: 459      tgcacacggcgctg 472
                ||||| ||||||||
Sbjct: 34850692 tgcacgcggcgctg 34850679



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 513      cgcactccctcggcgtcctcgccgtgtccacgccgccgtccgccgggcggttcc 566
                |||| ||||||||| |||| |||| ||||||||||||||| |||||||||||||
Sbjct: 34850623 cgcattccctcggcatcctggccgcgtccacgccgccgtcggccgggcggttcc 34850570



to top

>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score =  341 bits (172), Expect = 2e-90
 Identities = 324/374 (86%), Gaps = 3/374 (0%)
 Strand = Plus / Minus

                                                                         
Query: 99    cggacgccgccggcgtcggcgtcacctacggcaggcgtgcgacgagcctcccgccgccgg 158
             |||| |||| ||||||||||||||||||||||| ||| | ||||| | | ||||||||||
Sbjct: 30660 cggatgccggcggcgtcggcgtcacctacggcatgcgggggacgaacatgccgccgccgg 30601

                                                                         
Query: 159   ccgacgtcgcgcggttcctcgcccgcggcaccgtcctcgaccgcgtgaggctcctgaacg 218
             |||||||||||||||||||| |||||| |||| || ||||||||||  |||| ||| |||
Sbjct: 30600 ccgacgtcgcgcggttcctctcccgcgacaccatcttcgaccgcgtccggctgctggacg 30541

                                                                         
Query: 219   ccgacccgctcgccctgcgggccttcgccggcatgggcctcgccgtggacgtcaccgtcc 278
             ||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 30540 ccgacccgcgcgcgctgcgggccttcgccggcaccggcctcgccgtggacgtcaccgtcc 30481

                                                                         
Query: 279   cgaacgccctcgtgccgcgcatcgccgacagcgttgccttcgcgcggcgatgggtgcgcg 338
             | ||||||  ||| |||||| |||||| ||||   || | ||||||||| ||||||||||
Sbjct: 30480 ccaacgccgacgttccgcgcctcgccgccagccgcgcgtccgcgcggcggtgggtgcgcg 30421

                                                                         
Query: 339   ccagcgtcgcgccccacgtcgcggccgggaccaacgtgtcgcggatcctcgtgggcaggg 398
             |||||||||||||  |||  | ||||   |||||||| |||||| ||||||| |||   |
Sbjct: 30420 ccagcgtcgcgccgtacgcggaggcc---accaacgtctcgcgggtcctcgtcggcgacg 30364

                                                                         
Query: 399   acgtgatctcgcaggccaaccggacgctgctgctctgcctcgtgccggccatgcagaacc 458
             | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 30363 aggtgatctcgcaggccaaccggacgctgctgctcagcctcgtgccggccatgcggaacc 30304

                           
Query: 459   tgcacacggcgctg 472
             ||||| ||||||||
Sbjct: 30303 tgcacgcggcgctg 30290



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                   
Query: 513   cgcactccctcggcgtcctcgccgtgtccacgccgccgtccgccgggcggttcc 566
             |||||||||||||| |||| |||| ||||||||||||||| |||||||||||||
Sbjct: 30234 cgcactccctcggcatcctggccgcgtccacgccgccgtcggccgggcggttcc 30181



to top

>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
              sequence
          Length = 110682

 Score =  341 bits (172), Expect = 2e-90
 Identities = 324/374 (86%), Gaps = 3/374 (0%)
 Strand = Plus / Minus

                                                                          
Query: 99     cggacgccgccggcgtcggcgtcacctacggcaggcgtgcgacgagcctcccgccgccgg 158
              |||| |||| ||||||||||||||||||||||| ||| | ||||| | | ||||||||||
Sbjct: 104736 cggatgccggcggcgtcggcgtcacctacggcatgcgggggacgaacatgccgccgccgg 104677

                                                                          
Query: 159    ccgacgtcgcgcggttcctcgcccgcggcaccgtcctcgaccgcgtgaggctcctgaacg 218
              |||||||||||||||||||| |||||| |||| || ||||||||||  |||| ||| |||
Sbjct: 104676 ccgacgtcgcgcggttcctctcccgcgacaccatcttcgaccgcgtccggctgctggacg 104617

                                                                          
Query: 219    ccgacccgctcgccctgcgggccttcgccggcatgggcctcgccgtggacgtcaccgtcc 278
              ||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 104616 ccgacccgcgcgcgctgcgggccttcgccggcaccggcctcgccgtggacgtcaccgtcc 104557

                                                                          
Query: 279    cgaacgccctcgtgccgcgcatcgccgacagcgttgccttcgcgcggcgatgggtgcgcg 338
              | ||||||  ||| |||||| |||||| ||||   || | ||||||||| ||||||||||
Sbjct: 104556 ccaacgccgacgttccgcgcctcgccgccagccgcgcgtccgcgcggcggtgggtgcgcg 104497

                                                                          
Query: 339    ccagcgtcgcgccccacgtcgcggccgggaccaacgtgtcgcggatcctcgtgggcaggg 398
              |||||||||||||  |||  | ||||   |||||||| |||||| ||||||| |||   |
Sbjct: 104496 ccagcgtcgcgccgtacgcggaggcc---accaacgtctcgcgggtcctcgtcggcgacg 104440

                                                                          
Query: 399    acgtgatctcgcaggccaaccggacgctgctgctctgcctcgtgccggccatgcagaacc 458
              | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 104439 aggtgatctcgcaggccaaccggacgctgctgctcagcctcgtgccggccatgcggaacc 104380

                            
Query: 459    tgcacacggcgctg 472
              ||||| ||||||||
Sbjct: 104379 tgcacgcggcgctg 104366



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                    
Query: 513    cgcactccctcggcgtcctcgccgtgtccacgccgccgtccgccgggcggttcc 566
              |||||||||||||| |||| |||| ||||||||||||||| |||||||||||||
Sbjct: 104310 cgcactccctcggcatcctggccgcgtccacgccgccgtcggccgggcggttcc 104257



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 91      cgccgcggcggacgccgccggcgtcggcg 119
               |||||||||||||||||||||||| ||||
Sbjct: 1033000 cgccgcggcggacgccgccggcgtgggcg 1032972



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 90      tcgccgcggcggacgccgccggcgtcggcgtc 121
               |||||||||||||||||| |||| ||||||||
Sbjct: 5503328 tcgccgcggcggacgccggcggcctcggcgtc 5503297



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 241     cttcgccggcatgggcctcgccgt 264
               |||||||||||| |||||||||||
Sbjct: 5018971 cttcgccggcatcggcctcgccgt 5018948



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      ggcggacgccgccggcgtcg 116
               ||||||||||||||||||||
Sbjct: 2572185 ggcggacgccgccggcgtcg 2572166



to top

>gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putative conserved protein
             gene, partial cds; putative conserved protein, TetR-family
             regulatory protein,
             N5,N10-methylenetetrahydromethanopterin reductase,
             penicillin-binding protein, putative conserved protein,
             7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase,
             putative conserved proteins, necrosis inducing factor,
             conserved membrane-associated protein, transcriptional
             regulator, putative conserved protein, and discrete type
             II thioesterase genes, complete cds; valinomycin
             biosynthesis gene cluster, complete sequence; putative
             transposase gene, complete cds; and unknown gene
          Length = 39345

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 223   cccgctcgccctgcgggccttcgccgg 249
             |||||||||||||| ||||||||||||
Sbjct: 16771 cccgctcgccctgctggccttcgccgg 16797



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 85      gtcgatcgccgcggcggacgccgccgg 111
               |||||||||||| ||||||||||||||
Sbjct: 1525822 gtcgatcgccgccgcggacgccgccgg 1525848



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 90      tcgccgcggcggacgccgccg 110
               |||||||||||||||||||||
Sbjct: 1299675 tcgccgcggcggacgccgccg 1299655



to top

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 472    gctcgccacctcgctgcaccggcagat 498
              |||||||||||||||||| ||||||||
Sbjct: 412230 gctcgccacctcgctgcagcggcagat 412204



to top

>ref|NM_210889.1| Eremothecium gossypii AFL013Wp (AFL013W), mRNA
          Length = 735

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 472 gctcgccacctcgctgcaccggcagat 498
           |||||||||||||||||| ||||||||
Sbjct: 592 gctcgccacctcgctgcagcggcagat 566



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 424     gctgctgctctgcctcgtgccg 445
               ||||||||||||||||||||||
Sbjct: 6561835 gctgctgctctgcctcgtgccg 6561856



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 78      tgctgtcgtcgatcgccgcggcgg 101
               |||||||| |||||||||||||||
Sbjct: 8271141 tgctgtcgacgatcgccgcggcgg 8271118



to top

>gb|AE005088.1| Halobacterium sp. NRC-1 section 119 of 170 of the complete genome
          Length = 11020

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 90   tcgccgcggcggacgccgccggcgtcggcg 119
            |||||||| ||| |||||||||||||||||
Sbjct: 6914 tcgccgcgacggtcgccgccggcgtcggcg 6943



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 146     ctcccgccgccggccgacgtcgcgcg 171
               ||||||| ||||||||||||||||||
Sbjct: 1339032 ctcccgctgccggccgacgtcgcgcg 1339007



to top

>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam
           antibiotic nocardicin A biosynthesis gene cluster,
           partial sequence
          Length = 33451

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 91  cgccgcggcggacgccgccggcgtc 115
           ||||||||||| |||||||||||||
Sbjct: 413 cgccgcggcgggcgccgccggcgtc 437



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 212     ctgaacgccgacccgctcgcc 232
               |||||||||||||||||||||
Sbjct: 1230364 ctgaacgccgacccgctcgcc 1230344



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 91       cgccgcggcggacgccgccggcgtcggcg 119
                |||||||||||||| |||||||| |||||
Sbjct: 12882085 cgccgcggcggacgtcgccggcgccggcg 12882113



to top

>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
              complete sequence
          Length = 132243

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 91     cgccgcggcggacgccgccggcgtcggcg 119
              |||||||||||||| |||||||| |||||
Sbjct: 120301 cgccgcggcggacgtcgccggcgccggcg 120329



to top

>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 241    cttcgccggcatgggcctcgccgtg 265
              |||||||||||||||| ||||||||
Sbjct: 288472 cttcgccggcatgggcatcgccgtg 288448



to top

>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10,
              complete sequence
          Length = 170681

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    gacgccgccggcgtcggcgtc 121
              |||||||||||||||||||||
Sbjct: 138626 gacgccgccggcgtcggcgtc 138606



to top

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 336     gcgccagcgtcgcgccccacg 356
               |||||||||||||||||||||
Sbjct: 3852655 gcgccagcgtcgcgccccacg 3852635



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gccgccggcgtcggcgtcac 123
               ||||||||||||||||||||
Sbjct: 3608998 gccgccggcgtcggcgtcac 3609017



to top

>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 394    cagggacgtgatctcgcaggc 414
              |||||||||||||||||||||
Sbjct: 142457 cagggacgtgatctcgcaggc 142477



to top

>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 91    cgccgcggcggacgccgccggcgtcggcg 119
             |||||||||||||| |||||||| |||||
Sbjct: 57424 cgccgcggcggacgtcgccggcgccggcg 57396



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 101      gacgccgccggcgtcggcgtc 121
                |||||||||||||||||||||
Sbjct: 21615107 gacgccgccggcgtcggcgtc 21615087



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 436      cctcgtgccggccatgcagaacctgcacacggcgctg 472
                |||||||||||| |||| |||||||||| | ||||||
Sbjct: 19466845 cctcgtgccggcgatgcggaacctgcacgccgcgctg 19466881



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 91       cgccgcggcggacgccgccggcgtcggcg 119
                |||||||||||||| |||||||| |||||
Sbjct: 12878848 cgccgcggcggacgtcgccggcgccggcg 12878876



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 394     cagggacgtgatctcgcaggc 414
               |||||||||||||||||||||
Sbjct: 2919298 cagggacgtgatctcgcaggc 2919278



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 538     gtccacgccgccgtccgccg 557
               ||||||||||||||||||||
Sbjct: 3527786 gtccacgccgccgtccgccg 3527805



to top

>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0410C01
          Length = 138424

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 436   cctcgtgccggccatgcagaacctgcacacggcgctg 472
             |||||||||||| |||| |||||||||| | ||||||
Sbjct: 85254 cctcgtgccggcgatgcggaacctgcacgccgcgctg 85290



to top

>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full
           insert sequence
          Length = 1536

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 gacgccgccggcgtcggcgtc 121
           |||||||||||||||||||||
Sbjct: 742 gacgccgccggcgtcggcgtc 762



to top

>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene
             cluster, strain NRRL 3061
          Length = 105657

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 88    gatcgccgcggcggacgccgccggc 112
             ||||||||||||| |||||||||||
Sbjct: 68667 gatcgccgcggcgcacgccgccggc 68643



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 101      gacgccgccggcgtcggcgtc 121
                |||||||||||||||||||||
Sbjct: 21925306 gacgccgccggcgtcggcgtc 21925286



to top

>gb|M73789.1|STMXYLAB Streptomyces rubiginosus xylose kinase and xylose isomerase genes,
           complete cds
          Length = 3060

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  gcggcggacgccgccggcgtc 115
           |||||||||||||||||||||
Sbjct: 94  gcggcggacgccgccggcgtc 114



to top

>ref|XM_466770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2261

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ggacgccgccggcgtcggcg 119
           ||||||||||||||||||||
Sbjct: 182 ggacgccgccggcgtcggcg 201



to top

>ref|NM_197244.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0062C05.21), mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 cctcccgccgccggccgacg 164
           ||||||||||||||||||||
Sbjct: 176 cctcccgccgccggccgacg 195



to top

>ref|NM_190626.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 acgagcctcccgccgccggc 159
           ||||||||||||||||||||
Sbjct: 362 acgagcctcccgccgccggc 343



to top

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     gccggccatgcagaacctgc 461
               ||||||||||||||||||||
Sbjct: 5115817 gccggccatgcagaacctgc 5115836



to top

>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0062C05 map S21174S, complete sequence
          Length = 178867

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcccgccgccggccgacg 164
             ||||||||||||||||||||
Sbjct: 87719 cctcccgccgccggccgacg 87700



to top

>gb|AY658729.1| Synthetic construct Peudomonas aeruginosa clone FLH034873.01F
           PA3269 gene, partial cds
          Length = 855

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 289 cgtgccgcgcatcgccgacagcgt 312
           |||||||||| |||||||||||||
Sbjct: 333 cgtgccgcgcttcgccgacagcgt 356



to top

>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcccgccgccggccgacg 164
             ||||||||||||||||||||
Sbjct: 24574 cctcccgccgccggccgacg 24555



to top

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      cgcggcggacgccgccggcg 113
               ||||||||||||||||||||
Sbjct: 1521201 cgcggcggacgccgccggcg 1521182



to top

>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcccgccgccggccgacg 164
             ||||||||||||||||||||
Sbjct: 90866 cctcccgccgccggccgacg 90847



to top

>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 226532

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   cgcactccctcggcgtcctc 532
             ||||||||||||||||||||
Sbjct: 62384 cgcactccctcggcgtcctc 62403



to top

>emb|Y13732.1|AEY13732 Alcaligenes eutrophus genes for ureases, ureD1, ureD2, ureA, ureB,
            and ORF1, ORF2
          Length = 6740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 289  cgtgccgcgcatcgccgacagcgt 312
            ||||||||||| ||||||||||||
Sbjct: 4043 cgtgccgcgcaccgccgacagcgt 4020



to top

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    ggacgccgccggcgtcggcg 119
              ||||||||||||||||||||
Sbjct: 940686 ggacgccgccggcgtcggcg 940667



to top

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     cgccctgcgggccttcgccg 248
               ||||||||||||||||||||
Sbjct: 1218067 cgccctgcgggccttcgccg 1218048



to top

>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   cctcgtgccggccatgcaga 455
             ||||||||||||||||||||
Sbjct: 45584 cctcgtgccggccatgcaga 45603



to top

>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   cctcgtgccggccatgcaga 455
             ||||||||||||||||||||
Sbjct: 38944 cctcgtgccggccatgcaga 38963



to top

>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    cgcggcaccgtcctcgaccgcgtg 205
              |||||||||| |||||||||||||
Sbjct: 316548 cgcggcaccggcctcgaccgcgtg 316571



to top

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      cgcggcggacgccgccggcg 113
               ||||||||||||||||||||
Sbjct: 2855947 cgcggcggacgccgccggcg 2855928



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     gccggccatgcagaacctgc 461
               ||||||||||||||||||||
Sbjct: 5621077 gccggccatgcagaacctgc 5621096



to top

>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432B10
          Length = 131918

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcccgccgccggccgacg 164
             ||||||||||||||||||||
Sbjct: 13974 cctcccgccgccggccgacg 13955



to top

>dbj|AB210815.1| Oncorhynchus mykiss rtCYP19a gene for cytochrome P450 aromatase, exon
            1, partial cds
          Length = 1990

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 3    cactccactgccagctgctgaactgaag 30
            ||||||||  ||||||||||||||||||
Sbjct: 1741 cactccacgaccagctgctgaactgaag 1714



to top

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 88      gatcgccgcggcggacgccgccgg 111
               |||||||||||| |||||||||||
Sbjct: 3167897 gatcgccgcggcagacgccgccgg 3167920



to top

>gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete genome
          Length = 108252

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   ttcctcgcccgcggcaccgt 192
             ||||||||||||||||||||
Sbjct: 63918 ttcctcgcccgcggcaccgt 63937



to top

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 94     cgcggcggacgccgccggcgtcggcgtc 121
              ||||||||||| ||| ||||||||||||
Sbjct: 260354 cgcggcggacgtcgcgggcgtcggcgtc 260327



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 283     cgccctcgtgccgcgcatcgccga 306
               |||||||| |||||||||||||||
Sbjct: 3993470 cgccctcgcgccgcgcatcgccga 3993447



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 91      cgccgcggcggacgccgccggcgt 114
               ||||||||||| ||||||||||||
Sbjct: 3432347 cgccgcggcggtcgccgccggcgt 3432370



to top

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     cgcggcggacgccgccggcg 113
              ||||||||||||||||||||
Sbjct: 382323 cgcggcggacgccgccggcg 382342



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      cctcccgccgccggccgacg 164
                ||||||||||||||||||||
Sbjct: 18792298 cctcccgccgccggccgacg 18792279



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      cctcccgccgccggccgacg 164
                ||||||||||||||||||||
Sbjct: 26173526 cctcccgccgccggccgacg 26173507



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 100      ggacgccgccggcgtcggcg 119
                ||||||||||||||||||||
Sbjct: 24589062 ggacgccgccggcgtcggcg 24589081



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 140      acgagcctcccgccgccggc 159
                ||||||||||||||||||||
Sbjct: 36640580 acgagcctcccgccgccggc 36640599



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      cctcccgccgccggccgacg 164
                ||||||||||||||||||||
Sbjct: 34516680 cctcccgccgccggccgacg 34516661



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 91       cgccgcggcggacgccgccg 110
                ||||||||||||||||||||
Sbjct: 32065104 cgccgcggcggacgccgccg 32065123



to top

>gb|AF274288.1|AF274288 Culex nigripalpus baculovirus clone 19 putative envelope protein p74
            gene, complete cds; and unknown gene
          Length = 3080

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  ttcctcgcccgcggcaccgt 192
            ||||||||||||||||||||
Sbjct: 2683 ttcctcgcccgcggcaccgt 2664



to top

>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0512C01
          Length = 176261

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     cgccgcggcggacgccgccg 110
              ||||||||||||||||||||
Sbjct: 106918 cgccgcggcggacgccgccg 106937



to top

>gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 of the complete
            genome
          Length = 16841

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 289  cgtgccgcgcatcgccgacagcgt 312
            |||||||||| |||||||||||||
Sbjct: 6781 cgtgccgcgcttcgccgacagcgt 6758



to top

>ref|XM_341100.2| PREDICTED: Rattus norvegicus Unc-51 like kinase 1 (C. elegans)
           (Ulk1), mRNA
          Length = 5363

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcactccctcggcgtcctc 532
           ||||||||||||||||||||
Sbjct: 335 cgcactccctcggcgtcctc 316



to top

>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene
             cluster, partial sequence
          Length = 77534

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 458   ctgcacacggcgctgctcgccacctcgctgca 489
             |||||| |||||||||||| |||| |||||||
Sbjct: 25529 ctgcacccggcgctgctcgtcaccgcgctgca 25498



to top

>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0529H11
          Length = 165969

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    acgagcctcccgccgccggc 159
              ||||||||||||||||||||
Sbjct: 113846 acgagcctcccgccgccggc 113865



to top

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   gacgccgccggcgtcggcgtcacc 124
             ||||||||| ||||||||||||||
Sbjct: 58533 gacgccgcctgcgtcggcgtcacc 58556



to top

>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcccgccgccggccgacg 164
             ||||||||||||||||||||
Sbjct: 92399 cctcccgccgccggccgacg 92380



to top

>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1014_H03
          Length = 132696

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    ggacgccgccggcgtcggcg 119
              ||||||||||||||||||||
Sbjct: 103163 ggacgccgccggcgtcggcg 103182



to top

>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C01
          Length = 124548

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   ggacgccgccggcgtcggcg 119
             ||||||||||||||||||||
Sbjct: 33611 ggacgccgccggcgtcggcg 33630



to top

>dbj|AK120867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I17, full
           insert sequence
          Length = 2267

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 cctcccgccgccggccgacg 164
           ||||||||||||||||||||
Sbjct: 432 cctcccgccgccggccgacg 413



to top

>dbj|AK111828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064H19, full
           insert sequence
          Length = 2261

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ggacgccgccggcgtcggcg 119
           ||||||||||||||||||||
Sbjct: 182 ggacgccgccggcgtcggcg 201



to top

>dbj|AK100337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081E01, full
           insert sequence
          Length = 2693

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 acgagcctcccgccgccggc 159
           ||||||||||||||||||||
Sbjct: 699 acgagcctcccgccgccggc 680



to top

>dbj|AK071217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L22, full
           insert sequence
          Length = 1301

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 acgagcctcccgccgccggc 159
           ||||||||||||||||||||
Sbjct: 378 acgagcctcccgccgccggc 359



to top

>ref|NM_207848.1| Eremothecium gossypii AAL047Cp (AAL047C), mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 94  cgcggcggacgccgccggcgtcggcgtc 121
           ||||||||||| ||| ||||||||||||
Sbjct: 551 cgcggcggacgtcgcgggcgtcggcgtc 578



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 457     cctgcacacggcgctgctcg 476
               ||||||||||||||||||||
Sbjct: 5337280 cctgcacacggcgctgctcg 5337299



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 45      cgacgacgatgcacgcgccgatgc 68
               |||||||||||| |||||||||||
Sbjct: 1008493 cgacgacgatgcgcgcgccgatgc 1008470



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tgctgtcgtcgatcgccgcg 97
              ||||||||||||||||||||
Sbjct: 917141 tgctgtcgtcgatcgccgcg 917122



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 101     gacgccgccggcgtcggcgtcacc 124
               |||||||||||| |||||||||||
Sbjct: 1186339 gacgccgccggcatcggcgtcacc 1186316



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    cgtcgcgcggttcctcgccc 182
              ||||||||||||||||||||
Sbjct: 989693 cgtcgcgcggttcctcgccc 989712



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    cggcgctgctcgccacctcg 484
              ||||||||||||||||||||
Sbjct: 479846 cggcgctgctcgccacctcg 479827



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      cctcccgccgccggccgacg 164
                ||||||||||||||||||||
Sbjct: 18803152 cctcccgccgccggccgacg 18803133



to top

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      ggcggacgccgccggcgtcg 116
               ||||||||||||||||||||
Sbjct: 6893169 ggcggacgccgccggcgtcg 6893150



to top

>gb|AC122387.3| Mus musculus BAC clone RP24-76F22 from 6, complete sequence
          Length = 191058

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   gcgacgagcctcccgccgcc 156
             ||||||||||||||||||||
Sbjct: 59547 gcgacgagcctcccgccgcc 59566



to top

>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     cgccgcggcggacgccgccg 110
              ||||||||||||||||||||
Sbjct: 161831 cgccgcggcggacgccgccg 161850


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,261,189
Number of Sequences: 3902068
Number of extensions: 3261189
Number of successful extensions: 87552
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79875
Number of HSP's gapped (non-prelim): 7673
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top