ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463223.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
2gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosom... 46 0.11
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
4gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genom... 46 0.11
5dbj|AK051237.1| Mus musculus 12 days embryo spinal ganglion cDNA... 46 0.11
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
7emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chr... 46 0.11
8dbj|AK062353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
9gb|AY436779.1| Pyrus communis phosphatidyl glycerol specific pho... 44 0.42
10gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.42
11gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.42
12gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 44 0.42
13gb|BT016307.1| Zea mays clone Contig140 mRNA sequence 42 1.7
14gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
15gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
16gb|AY239474.1| Microtus irene C-myc (c-myc) gene, exon 2 and par... 42 1.7
17gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.7
18gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
20emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in ... 42 1.7
21dbj|AK109246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
22emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.7
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24ref|XM_475559.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
25gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
26gb|AY738725.1| Trypanosoma cruzi Sof1-like protein mRNA, complet... 40 6.5
27gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete... 40 6.5
28ref|XM_364094.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 6.5
29gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
30ref|XM_656647.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.5
31gb|AY504633.1| Emericella nidulans delta9-stearic acid desaturas... 40 6.5
32ref|XM_816538.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.5
33gb|AY344437.1| Unidentified bacterium clone L5-12 16S ribosomal ... 40 6.5
34gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.5
35emb|Z48952.1|SC9916 S.cerevisiae chromosome XIII cosmid 9916 40 6.5
36emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.5
37emb|BX284763.1|NCB19A17 Neurospora crassa DNA linkage group II B... 40 6.5
38emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 40 6.5
39tpg|BK003235.1| TPA: TPA_inf: Drosophila melanogaster HDC19904 (... 40 6.5
40emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 6.5
41dbj|AB224379.1| Aspergillus oryzae cDNA, contig sequence: AoEST1224 40 6.5
42gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 6.5
43dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 6.5
44gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.5
45gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 6.5
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48ref|XM_392372.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.5
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
50dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
52dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
53dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
54dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
55dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56dbj|AK120039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
57dbj|AK106398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
58dbj|AK073473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
59dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
60emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 6.5
61dbj|AK064058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
62gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 6.5
63gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.5
64gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.5
65gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
66gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
67emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5
68emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chrom... 40 6.5
69gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
70dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, comple... 40 6.5 
>ref|XM_463223.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 539

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 354 cctgctgctcgaccgcttcgcacccagctag 384
           |||||| |||||||||||||| |||||||||
Sbjct: 288 cctgctcctcgaccgcttcgcccccagctag 318
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>gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosome 2, complete sequence
          Length = 184634

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 444   cttactgttcagagacattatgc 466
             |||||||||||||||||||||||
Sbjct: 94646 cttactgttcagagacattatgc 94668
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 354      cctgctgctcgaccgcttcgcacccagctag 384
                |||||| |||||||||||||| |||||||||
Sbjct: 23523046 cctgctcctcgaccgcttcgcccccagctag 23523076



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 273    ggcggcagccgcggcgacgaag 294
              ||||||||||||||||||||||
Sbjct: 175889 ggcggcagccgcggcgacgaag 175868



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      acgacgacggtggcggcggc 140
                ||||||||||||||||||||
Sbjct: 24788817 acgacgacggtggcggcggc 24788798
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>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
             sequence
          Length = 144383

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 354   cctgctgctcgaccgcttcgcacccagctag 384
             |||||| |||||||||||||| |||||||||
Sbjct: 59211 cctgctcctcgaccgcttcgcccccagctag 59181
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>dbj|AK051237.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130020I03 product:hypothetical
           Arginine-rich region containing protein, full insert
           sequence
          Length = 1878

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 444 cttactgttcagagacattatgc 466
           |||||||||||||||||||||||
Sbjct: 783 cttactgttcagagacattatgc 761
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 354      cctgctgctcgaccgcttcgcacccagctag 384
                |||||| |||||||||||||| |||||||||
Sbjct: 23516074 cctgctcctcgaccgcttcgcccccagctag 23516104



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 273    ggcggcagccgcggcgacgaag 294
              ||||||||||||||||||||||
Sbjct: 175889 ggcggcagccgcggcgacgaag 175868



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      acgacgacggtggcggcggc 140
                ||||||||||||||||||||
Sbjct: 24878601 acgacgacggtggcggcggc 24878582
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>emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chromosome 2, complete
              sequence
          Length = 145879

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 444    cttactgttcagagacattatgc 466
              |||||||||||||||||||||||
Sbjct: 138340 cttactgttcagagacattatgc 138362
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>dbj|AK062353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-G07, full
           insert sequence
          Length = 533

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 354 cctgctgctcgaccgcttcgcacccagctag 384
           |||||| |||||||||||||| |||||||||
Sbjct: 288 cctgctcctcgaccgcttcgcccccagctag 318
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>gb|AY436779.1| Pyrus communis phosphatidyl glycerol specific phospholipase C-like
           mRNA, partial sequence
          Length = 343

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 352 tacctgctgctcgaccgcttcg 373
           ||||||||||||||||||||||
Sbjct: 164 tacctgctgctcgaccgcttcg 143
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 273   ggcggcagccgcggcgacgaag 294
             ||||||||||||||||||||||
Sbjct: 12956 ggcggcagccgcggcgacgaag 12935
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 273    ggcggcagccgcggcgacgaag 294
              ||||||||||||||||||||||
Sbjct: 109889 ggcggcagccgcggcgacgaag 109868
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 273   ggcggcagccgcggcgacgaag 294
             ||||||||||||||||||||||
Sbjct: 86765 ggcggcagccgcggcgacgaag 86786
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>gb|BT016307.1| Zea mays clone Contig140 mRNA sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 caaggcggcagccgcggcgac 290
           |||||||||||||||||||||
Sbjct: 31  caaggcggcagccgcggcgac 51
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>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0070D14, complete sequence
          Length = 174780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 126   gacggtggcggcggcatccgacgtcgccg 154
             |||||||||||||||| ||| ||||||||
Sbjct: 24865 gacggtggcggcggcagccggcgtcgccg 24893
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>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13,
              complete sequence
          Length = 176150

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 126    gacggtggcggcggcatccgacgtcgccg 154
              |||||||||||||||| ||| ||||||||
Sbjct: 141691 gacggtggcggcggcagccggcgtcgccg 141719
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>gb|AY239474.1| Microtus irene C-myc (c-myc) gene, exon 2 and partial cds
          Length = 668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 acgacgacggtggcggcggca 141
           |||||||||||||||||||||
Sbjct: 213 acgacgacggtggcggcggca 233
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     ggcgagctctccgccgccctg 189
               |||||||||||||||||||||
Sbjct: 1390556 ggcgagctctccgccgccctg 1390536
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    tccgacgtcgccggcgcctgg 162
              |||||||||||||||||||||
Sbjct: 610976 tccgacgtcgccggcgcctgg 610996
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 126      gacggtggcggcggcatccgacgtcgccg 154
                |||||||||||||||| ||| ||||||||
Sbjct: 15031904 gacggtggcggcggcagccggcgtcgccg 15031932
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>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6,
             complete sequence
          Length = 143341

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   cctccactgtatatgtaacta 423
             |||||||||||||||||||||
Sbjct: 57375 cctccactgtatatgtaacta 57355
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>dbj|AK109246.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G12, full
           insert sequence
          Length = 576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 126 gacggtggcggcggcatccgacgtcgccg 154
           |||||||||||||||| ||| ||||||||
Sbjct: 141 gacggtggcggcggcagccggcgtcgccg 169
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 125    cgacggtggcggcggcatccg 145
              |||||||||||||||||||||
Sbjct: 846753 cgacggtggcggcggcatccg 846733
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 126      gacggtggcggcggcatccgacgtcgccg 154
                |||||||||||||||| ||| ||||||||
Sbjct: 15113599 gacggtggcggcggcagccggcgtcgccg 15113627
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>ref|XM_475559.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 acgacgacggtggcggcggc 140
           ||||||||||||||||||||
Sbjct: 152 acgacgacggtggcggcggc 171
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 22513 acgacgacggtggcggcggc 22494
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>gb|AY738725.1| Trypanosoma cruzi Sof1-like protein mRNA, complete cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  tccactgtatatgtaactac 424
            ||||||||||||||||||||
Sbjct: 1041 tccactgtatatgtaactac 1022
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>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence
          Length = 173097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    acgacgacggtggcggcggc 140
              ||||||||||||||||||||
Sbjct: 127941 acgacgacggtggcggcggc 127922
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>ref|XM_364094.1| Magnaporthe grisea 70-15 predicted protein (MG08939.4) partial mRNA
          Length = 3876

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  ctggagggggccggcggcggcggg 333
            ||||||||||||||||||| ||||
Sbjct: 1097 ctggagggggccggcggcgccggg 1074
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11,
              complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    acgacgacggtggcggcggc 140
              ||||||||||||||||||||
Sbjct: 108745 acgacgacggtggcggcggc 108726
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>ref|XM_656647.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4135.2), mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  atccagatcatccatttcgt 49
           ||||||||||||||||||||
Sbjct: 857 atccagatcatccatttcgt 838
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>gb|AY504633.1| Emericella nidulans delta9-stearic acid desaturase (sdeB) gene,
            complete sequence
          Length = 2080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   atccagatcatccatttcgt 49
            ||||||||||||||||||||
Sbjct: 1378 atccagatcatccatttcgt 1359
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>ref|XM_816538.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508461.390) partial mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  tccactgtatatgtaactac 424
            ||||||||||||||||||||
Sbjct: 1041 tccactgtatatgtaactac 1022
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>gb|AY344437.1| Unidentified bacterium clone L5-12 16S ribosomal RNA gene, partial
           sequence
          Length = 650

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 acctgctgctcgaccgcttc 372
           ||||||||||||||||||||
Sbjct: 97  acctgctgctcgaccgcttc 78
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     ctgctgctcgaccgcttcgc 374
               ||||||||||||||||||||
Sbjct: 3390123 ctgctgctcgaccgcttcgc 3390104
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>emb|Z48952.1|SC9916 S.cerevisiae chromosome XIII cosmid 9916
          Length = 22131

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   tcaacgacgacggtggcggcggca 141
             ||||||| ||||||||||||||||
Sbjct: 11467 tcaacgatgacggtggcggcggca 11490
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     cggcaggccgtgccggcgat 221
               ||||||||||||||||||||
Sbjct: 1735428 cggcaggccgtgccggcgat 1735409
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>emb|BX284763.1|NCB19A17 Neurospora crassa DNA linkage group II BAC contig B19A17
          Length = 155568

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    acgacgacggtggcggcggc 140
              ||||||||||||||||||||
Sbjct: 133294 acgacgacggtggcggcggc 133313
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>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5
          Length = 167014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    cgacgacggtggcggcggca 141
              ||||||||||||||||||||
Sbjct: 124926 cgacgacggtggcggcggca 124945
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>tpg|BK003235.1| TPA: TPA_inf: Drosophila melanogaster HDC19904 (HDC19904) gene,
           complete cds
          Length = 941

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 acgacgacggtggcggcggc 140
           ||||||||||||||||||||
Sbjct: 785 acgacgacggtggcggcggc 804
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 74229 acgacgacggtggcggcggc 74210
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>dbj|AB224379.1| Aspergillus oryzae cDNA, contig sequence: AoEST1224
          Length = 538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 ggatgtcggacgcgacggtg 351
           ||||||||||||||||||||
Sbjct: 434 ggatgtcggacgcgacggtg 415
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ggcggcagccgcggcgacga 292
              ||||||||||||||||||||
Sbjct: 594066 ggcggcagccgcggcgacga 594085
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     ggatgtcggacgcgacggtg 351
               ||||||||||||||||||||
Sbjct: 1627821 ggatgtcggacgcgacggtg 1627802
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     agaagcggcaggccgtgccg 216
               ||||||||||||||||||||
Sbjct: 3404207 agaagcggcaggccgtgccg 3404188
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 17934 acgacgacggtggcggcggc 17915
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 167      tcggcgagctctccgccgccctgc 190
                ||||||||||||||||||| ||||
Sbjct: 24905513 tcggcgagctctccgccgcgctgc 24905536
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      acgacgacggtggcggcggc 140
                ||||||||||||||||||||
Sbjct: 21703251 acgacgacggtggcggcggc 21703232
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>ref|XM_392372.2| PREDICTED: Apis mellifera similar to ENSANGP00000021218
           (LOC408841), mRNA
          Length = 3779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 acgacgacggtggcggcggc 140
           ||||||||||||||||||||
Sbjct: 29  acgacgacggtggcggcggc 48
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     acgacgacggtggcggcggc 140
               ||||||||||||||||||||
Sbjct: 1447083 acgacgacggtggcggcggc 1447064
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      acgacgacggtggcggcggc 140
                ||||||||||||||||||||
Sbjct: 19769793 acgacgacggtggcggcggc 19769774
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 277      gcagccgcggcgacgaagccgtcc 300
                ||||| ||||||||||||||||||
Sbjct: 25694024 gcagcagcggcgacgaagccgtcc 25694047
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004A09
          Length = 158826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    gcagccgcggcgacgaagccgtcc 300
              ||||| ||||||||||||||||||
Sbjct: 140830 gcagcagcggcgacgaagccgtcc 140853
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 167     tcggcgagctctccgccgcc 186
               ||||||||||||||||||||
Sbjct: 4682307 tcggcgagctctccgccgcc 4682288
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>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G07
          Length = 149119

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 78344 acgacgacggtggcggcggc 78325
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>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1136H02
          Length = 145086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    acgacgacggtggcggcggc 140
              ||||||||||||||||||||
Sbjct: 126551 acgacgacggtggcggcggc 126532
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>dbj|AK120039.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E08, full
           insert sequence
          Length = 569

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tcggcgagctctccgccgccctgc 190
           ||||||||||||||||||| ||||
Sbjct: 124 tcggcgagctctccgccgcgctgc 147
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>dbj|AK106398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F12, full
           insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 acgacgacggtggcggcggc 140
           ||||||||||||||||||||
Sbjct: 559 acgacgacggtggcggcggc 578
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>dbj|AK073473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045C05, full
           insert sequence
          Length = 2698

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 acgacgacggtggcggcggc 140
           ||||||||||||||||||||
Sbjct: 226 acgacgacggtggcggcggc 207
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>dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L04, full
           insert sequence
          Length = 1016

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tcggcgagctctccgccgccctgc 190
           ||||||||||||||||||| ||||
Sbjct: 574 tcggcgagctctccgccgcgctgc 597
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    ccgtcgccgacctggagggggccg 322
              |||||||||||||||||| |||||
Sbjct: 236344 ccgtcgccgacctggaggaggccg 236321
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>dbj|AK064058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-F07, full
           insert sequence
          Length = 566

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tcggcgagctctccgccgccctgc 190
           ||||||||||||||||||| ||||
Sbjct: 124 tcggcgagctctccgccgcgctgc 147
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    acgacgacggtggcggcggc 140
              ||||||||||||||||||||
Sbjct: 284754 acgacgacggtggcggcggc 284773
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     ccggcggcggcgggatgtcg 339
               ||||||||||||||||||||
Sbjct: 3484648 ccggcggcggcgggatgtcg 3484629
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 426     tttctgtttctttatcccct 445
               ||||||||||||||||||||
Sbjct: 3254577 tttctgtttctttatcccct 3254596
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      acgacgacggtggcggcggc 140
                ||||||||||||||||||||
Sbjct: 21714914 acgacgacggtggcggcggc 21714895
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 167      tcggcgagctctccgccgccctgc 190
                ||||||||||||||||||| ||||
Sbjct: 24833719 tcggcgagctctccgccgcgctgc 24833742
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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   tcggcgagctctccgccgccctgc 190
             ||||||||||||||||||| ||||
Sbjct: 59355 tcggcgagctctccgccgcgctgc 59332
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>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete
             sequence
          Length = 218815

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 35208 acgacgacggtggcggcggc 35189
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>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
             complete sequence
          Length = 144455

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acgacgacggtggcggcggc 140
             ||||||||||||||||||||
Sbjct: 41163 acgacgacggtggcggcggc 41144
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>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds
          Length = 8532

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 277  gcagccgcggcgacgaagccgtcc 300
            ||||| ||||||||||||||||||
Sbjct: 3606 gcagcagcggcgacgaagccgtcc 3629


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,146,352
Number of Sequences: 3902068
Number of extensions: 4146352
Number of successful extensions: 96653
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94085
Number of HSP's gapped (non-prelim): 2568
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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