ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
2dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
3gb|BT018422.1| Zea mays clone EL01N0360B07.d mRNA sequence 192 8e-46
4dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.12
5gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.47
6emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 44 0.47
7emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 44 0.47
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
9dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 44 0.47
10dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
11emb|AJ323200.1|HSA323200 Homo sapiens genomic sequence surroundi... 44 0.47
12emb|Z58423.1|HS3A11F H.sapiens CpG island DNA genomic Mse1 fragm... 44 0.47
13gb|AE017221.1| Thermus thermophilus HB27, complete genome 44 0.47
14gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
15ref|XM_818279.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.9
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
17dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.9
19dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20ref|XM_480048.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
21ref|XM_365766.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.4
22ref|XM_416156.1| PREDICTED: Gallus gallus similar to netrin 4 (L... 40 7.4
23gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, com... 40 7.4
24emb|X57310.1|NLPCBABC Nocardia lactamdurans pcbAB and pcbC genes... 40 7.4
25gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.4
26gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.4
27emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.4
28emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 7.4
29ref|NM_205494.1| Gallus gallus transgelin (TAGLN), mRNA 40 7.4
30gb|AE005723.1| Caulobacter crescentus CB15 section 49 of 359 of ... 40 7.4
31gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromoso... 40 7.4
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
34gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.4
35dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.4
36dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
37dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
38emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.4
39gb|AY108210.1| Zea mays PCO096605 mRNA sequence 40 7.4
40gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
41emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.4
42gb|M83105.1|CHKGISM22A Chicken SM22 mRNA, complete cds 40 7.4 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  222 bits (112), Expect = 9e-55
 Identities = 256/304 (84%)
 Strand = Plus / Plus

                                                                            
Query: 240      cggcggacgagctggaggaccgcctcctcaagaggctggaggaggcctacgcggcggccc 299
                ||||||||||||||||||| || || || | |||||||||||| |||||||||||||| |
Sbjct: 12328291 cggcggacgagctggaggatcggctgctgaggaggctggaggatgcctacgcggcggcgc 12328350

                                                                            
Query: 300      tggccggcctcgctgagctcggctacgccgaggacgccgcgctccgggccgtcctccgcg 359
                ||||| ||||||| || ||||| |||  |||||| || |||||||  ||||| |||||||
Sbjct: 12328351 tggcccgcctcgccgacctcgggtactgcgaggaggcggcgctccacgccgtgctccgcg 12328410

                                                                            
Query: 360      cgggccactgctacggcaagcttgacgaccctgtcgataacatcgttgccaacgcccgct 419
                |||||||||||||||| ||||| |  || || || |  |||||||| |||||||| ||| 
Sbjct: 12328411 cgggccactgctacgggaagctgggggaacccgtggccaacatcgtcgccaacgcgcgcg 12328470

                                                                            
Query: 420      ccttcctcaacgatccagacgcccccggcggagctggcgggttcgccgacctccgccgcc 479
                 |||||||   || || ||   | |||| || || |||||||||||||||||||||||||
Sbjct: 12328471 tcttcctctcagaccccgatcacgccggtggggcaggcgggttcgccgacctccgccgcc 12328530

                                                                            
Query: 480      tcgaggagtactccctagcggggctggtctgcctccttcagagcagccgccccaccatct 539
                |||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||
Sbjct: 12328531 tcgaagagtactccctcgcggggctcgtctgcctcctccagagcagccgccccaccctct 12328590

                    
Query: 540      cccg 543
                ||||
Sbjct: 12328591 cccg 12328594



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 66      ctccggccgccgtcgcccctc 86
               |||||||||||||||||||||
Sbjct: 2372054 ctccggccgccgtcgcccctc 2372074
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score =  222 bits (112), Expect = 9e-55
 Identities = 256/304 (84%)
 Strand = Plus / Plus

                                                                          
Query: 240    cggcggacgagctggaggaccgcctcctcaagaggctggaggaggcctacgcggcggccc 299
              ||||||||||||||||||| || || || | |||||||||||| |||||||||||||| |
Sbjct: 111845 cggcggacgagctggaggatcggctgctgaggaggctggaggatgcctacgcggcggcgc 111904

                                                                          
Query: 300    tggccggcctcgctgagctcggctacgccgaggacgccgcgctccgggccgtcctccgcg 359
              ||||| ||||||| || ||||| |||  |||||| || |||||||  ||||| |||||||
Sbjct: 111905 tggcccgcctcgccgacctcgggtactgcgaggaggcggcgctccacgccgtgctccgcg 111964

                                                                          
Query: 360    cgggccactgctacggcaagcttgacgaccctgtcgataacatcgttgccaacgcccgct 419
              |||||||||||||||| ||||| |  || || || |  |||||||| |||||||| ||| 
Sbjct: 111965 cgggccactgctacgggaagctgggggaacccgtggccaacatcgtcgccaacgcgcgcg 112024

                                                                          
Query: 420    ccttcctcaacgatccagacgcccccggcggagctggcgggttcgccgacctccgccgcc 479
               |||||||   || || ||   | |||| || || |||||||||||||||||||||||||
Sbjct: 112025 tcttcctctcagaccccgatcacgccggtggggcaggcgggttcgccgacctccgccgcc 112084

                                                                          
Query: 480    tcgaggagtactccctagcggggctggtctgcctccttcagagcagccgccccaccatct 539
              |||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||
Sbjct: 112085 tcgaagagtactccctcgcggggctcgtctgcctcctccagagcagccgccccaccctct 112144

                  
Query: 540    cccg 543
              ||||
Sbjct: 112145 cccg 112148
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>gb|BT018422.1| Zea mays clone EL01N0360B07.d mRNA sequence
          Length = 1867

 Score =  192 bits (97), Expect = 8e-46
 Identities = 244/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 239 acggcggacgagctggaggaccgcctcctcaagaggctggaggaggcctacgcggcggcc 298
           |||||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 263 acggcggacgagcttgaggagcgcctgctgaagaggctggatgaggcgtacgcggcggcc 322

                                                                       
Query: 299 ctggccggcctcgctgagctcggctacgccgaggacgccgcgctccgggccgtcctccgc 358
           |||||| ||||||| || |||||| ||| |||||| ||  | |||  |||||| |||| |
Sbjct: 323 ctggcccgcctcgccgacctcggccacggcgaggaggcatccctcgaggccgttctccac 382

                                                                       
Query: 359 gcgggccactgctacggcaagcttgacgaccctgtcgataacatcgttgccaacgcccgc 418
            |||||||||| |||||||||||  |||| || ||    |||||||| ||||||||||||
Sbjct: 383 tcgggccactgttacggcaagctcaacgatcccgtttccaacatcgtggccaacgcccgc 442

                                                                       
Query: 419 tccttcctcaacgatccagacgcccccggcggagctggcgggttcgccgacctccgccgc 478
            ||| ||||  |||||| | |  | || |||  || ||||| |||||||||||||| |||
Sbjct: 443 gcctacctctccgatcctggccacgccagcgcggccggcggcttcgccgacctccgacgc 502

                                                                
Query: 479 ctcgaggagtactccctagcggggctggtctgcctccttcagagcagccgccc 531
           |||||||| |||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 503 ctcgaggaatactccctcgcggggcttgtctgcctcctccagagcagccgccc 555
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 92      gccggccagccccgcgagcgcgg 114
               |||||||||||||||||||||||
Sbjct: 2290060 gccggccagccccgcgagcgcgg 2290038



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 91      ggccggccagccccgcgagcgcgg 114
               ||||||||||| ||||||||||||
Sbjct: 6116063 ggccggccagctccgcgagcgcgg 6116040



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 250     gctggaggaccgcctcctca 269
               ||||||||||||||||||||
Sbjct: 5847958 gctggaggaccgcctcctca 5847939
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 92      gccggccagccccgcgagcgcgggtcccgcgccg 125
               |||||||||| ||||||||||||  |||||||||
Sbjct: 1531639 gccggccagcgccgcgagcgcggtgcccgcgccg 1531606
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 346   ggccgtcctccgcgcgggccac 367
             ||||||||||||||||||||||
Sbjct: 42486 ggccgtcctccgcgcgggccac 42465
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 319  cggctacgccgaggacgccgcg 340
            ||||||||||||||||||||||
Sbjct: 4957 cggctacgccgaggacgccgcg 4936
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 65       cctccggccgccgtcgcccctc 86
                ||||||||||||||||||||||
Sbjct: 18140471 cctccggccgccgtcgcccctc 18140492
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 270    agaggctggaggaggcctacgc 291
              ||||||||||||||||||||||
Sbjct: 781152 agaggctggaggaggcctacgc 781131



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     agaggctggaggaggcctac 289
               ||||||||||||||||||||
Sbjct: 1411596 agaggctggaggaggcctac 1411577
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>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0047E05
          Length = 184323

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 65    cctccggccgccgtcgcccctc 86
             ||||||||||||||||||||||
Sbjct: 63872 cctccggccgccgtcgcccctc 63893
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>emb|AJ323200.1|HSA323200 Homo sapiens genomic sequence surrounding NotI site, clone NB1-104R
          Length = 438

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 466 cgacctccgccgcctcgaggag 487
           ||||||||||||||||||||||
Sbjct: 173 cgacctccgccgcctcgaggag 152
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>emb|Z58423.1|HS3A11F H.sapiens CpG island DNA genomic Mse1 fragment, clone 3a11, forward
           read cpg3a11.f1b
          Length = 278

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 325 cgccgaggacgccgcgctccgg 346
           ||||||||||||||||||||||
Sbjct: 217 cgccgaggacgccgcgctccgg 238
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 270    agaggctggaggaggcctacgc 291
              ||||||||||||||||||||||
Sbjct: 452231 agaggctggaggaggcctacgc 452210



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     agaggctggaggaggcctac 289
               ||||||||||||||||||||
Sbjct: 1088591 agaggctggaggaggcctac 1088572
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>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15,
              complete sequence
          Length = 184316

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     ctccggccgccgtcgcccctc 86
              |||||||||||||||||||||
Sbjct: 146306 ctccggccgccgtcgcccctc 146326
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>ref|XM_818279.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.26.0245)
           partial mRNA
          Length = 486

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 467 gacctccgccgcctcgaggag 487
           |||||||||||||||||||||
Sbjct: 44  gacctccgccgcctcgaggag 64
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 66      ctccggccgccgtcgcccctc 86
               |||||||||||||||||||||
Sbjct: 7021383 ctccggccgccgtcgcccctc 7021403
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>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0095O23
          Length = 159792

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    ctccggccgccgtcgcccctc 86
             |||||||||||||||||||||
Sbjct: 50464 ctccggccgccgtcgcccctc 50484
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 92     gccggccagccccgcgagcgcgggtcccgcgcc 124
              ||||||| || |||||||||||||||| |||||
Sbjct: 318907 gccggccggcgccgcgagcgcgggtccggcgcc 318939
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>dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0433B06
          Length = 126258

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     ctccggccgccgtcgcccctc 86
              |||||||||||||||||||||
Sbjct: 111093 ctccggccgccgtcgcccctc 111113
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>ref|XM_480048.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 463 cgccgacctccgccgcctcg 482
           ||||||||||||||||||||
Sbjct: 243 cgccgacctccgccgcctcg 262
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>ref|XM_365766.1| Magnaporthe grisea 70-15 hypothetical protein (MG02468.4) partial
            mRNA
          Length = 2694

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  accgcctcctcaagaggctg 277
            ||||||||||||||||||||
Sbjct: 2279 accgcctcctcaagaggctg 2260
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>ref|XM_416156.1| PREDICTED: Gallus gallus similar to netrin 4 (LOC417915), mRNA
          Length = 831

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 322 ctacgccgaggacgccgcgctccg 345
           |||||||||||||||| |||||||
Sbjct: 189 ctacgccgaggacgccacgctccg 212
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>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence
          Length = 214060

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gccagcgaccctgctcgccc 170
              ||||||||||||||||||||
Sbjct: 146079 gccagcgaccctgctcgccc 146060
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>emb|X57310.1|NLPCBABC Nocardia lactamdurans pcbAB and pcbC genes for
            alpha-aminoadipyl-L-cysteinyl-D-valine synthetase and
            isopenicillin N synthase
          Length = 12004

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ctacgccgaggacgccgcgc 341
            ||||||||||||||||||||
Sbjct: 9256 ctacgccgaggacgccgcgc 9275
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 292     ggcggccctggccggcctcgctga 315
               |||||||||||||| |||||||||
Sbjct: 1196039 ggcggccctggccgacctcgctga 1196016
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 188     ctcgatctgtccgctcaggc 207
               ||||||||||||||||||||
Sbjct: 4215015 ctcgatctgtccgctcaggc 4214996
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 460    gttcgccgacctccgccgcctcga 483
              |||||||||||| |||||||||||
Sbjct: 199089 gttcgccgacctgcgccgcctcga 199066
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 328    cgaggacgccgcgctccgggccgt 351
              ||||||||||||||||||| ||||
Sbjct: 222946 cgaggacgccgcgctccggaccgt 222969
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>ref|NM_205494.1| Gallus gallus transgelin (TAGLN), mRNA
          Length = 1214

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 gacgagctggaggaccgcct 264
           ||||||||||||||||||||
Sbjct: 128 gacgagctggaggaccgcct 147
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>gb|AE005723.1| Caulobacter crescentus CB15 section 49 of 359 of the complete genome
          Length = 10573

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  gatccagacgcccccggcgg 450
            ||||||||||||||||||||
Sbjct: 5108 gatccagacgcccccggcgg 5089
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>gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromosome ul, complete
             sequence
          Length = 215430

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gacgagctggaggaccgcct 264
             ||||||||||||||||||||
Sbjct: 87418 gacgagctggaggaccgcct 87437
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 462      tcgccgacctccgccgcctc 481
                ||||||||||||||||||||
Sbjct: 20966713 tcgccgacctccgccgcctc 20966694
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     cgccgacctccgccgcctcg 482
               ||||||||||||||||||||
Sbjct: 2376053 cgccgacctccgccgcctcg 2376072
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     cggctacgccgaggacgccg 338
               ||||||||||||||||||||
Sbjct: 2687103 cggctacgccgaggacgccg 2687084
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      cctccggccgccgtcgcccc 84
               ||||||||||||||||||||
Sbjct: 3383680 cctccggccgccgtcgcccc 3383661
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>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0025F03
          Length = 138042

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   cgccgacctccgccgcctcg 482
             ||||||||||||||||||||
Sbjct: 52023 cgccgacctccgccgcctcg 52042
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>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0473D02
          Length = 146185

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    cgccgacctccgccgcctcg 482
              ||||||||||||||||||||
Sbjct: 123552 cgccgacctccgccgcctcg 123571
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    acgcggcggccctggccggc 307
              ||||||||||||||||||||
Sbjct: 696222 acgcggcggccctggccggc 696203
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>gb|AY108210.1| Zea mays PCO096605 mRNA sequence
          Length = 1795

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  gcctacgcggcggccctggccggc 307
            ||||||||||||||| ||||||||
Sbjct: 1447 gcctacgcggcggccttggccggc 1424
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 462      tcgccgacctccgccgcctc 481
                ||||||||||||||||||||
Sbjct: 20892922 tcgccgacctccgccgcctc 20892903
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>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   tcgccgacctccgccgcctc 481
             ||||||||||||||||||||
Sbjct: 52198 tcgccgacctccgccgcctc 52179
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>gb|M83105.1|CHKGISM22A Chicken SM22 mRNA, complete cds
          Length = 1214

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 gacgagctggaggaccgcct 264
           ||||||||||||||||||||
Sbjct: 128 gacgagctggaggaccgcct 147


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,179,071
Number of Sequences: 3902068
Number of extensions: 3179071
Number of successful extensions: 68911
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66489
Number of HSP's gapped (non-prelim): 2421
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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