ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41a03 |
|---|---|
| Clone Library Name | barley_pub |
>SAT1_ARATH (Q42588) Serine acetyltransferase 1 (EC 2.3.1.30) (AtSAT-1) (SAT-p)| (AtSERAT2;1) Length = 314 Score = 59.7 bits (143), Expect = 7e-09 Identities = 32/121 (26%), Positives = 46/121 (38%) Frame = +2 Query: 248 DQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQDALRD 427 D VW ++ EA++D + EP+L YY + LP + L + Sbjct: 46 DDVWIKMLEEAKSDVKQEPILSNYYYASITSHRSLESALAHILSVKLSNLN-LPSNTLFE 104 Query: 428 ILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXXWSEGR 607 + + L PE I T PAC VHCFL +KGF W + R Sbjct: 105 LFISVLEESPEIIESTKQDLIAVKERDPACISYVHCFLGFKGFLACQAHRIAHTLWKQNR 164 Query: 608 R 610 + Sbjct: 165 K 165
>SAT3_ARATH (Q39218) Serine acetyltransferase 3, mitochondrial precursor (EC| 2.3.1.30) (AtSAT-3) (SAT-m) (AtSERAT2;2) Length = 376 Score = 57.0 bits (136), Expect = 4e-08 Identities = 29/121 (23%), Positives = 47/121 (38%) Frame = +2 Query: 248 DQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQDALRD 427 D VW ++ EA++D EP++ Y+ + LP + L D Sbjct: 108 DDVWAKIREEAKSDIAKEPIVSAYYHASIVSQRSLEAALANTLSVKLSNLN-LPSNTLFD 166 Query: 428 ILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXXWSEGR 607 + G L +P+ + PAC VHCFL++KGF W++ R Sbjct: 167 LFSGVLQGNPDIVESVKLDLLAVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQDR 226 Query: 608 R 610 + Sbjct: 227 K 227
>SAT5_ARATH (Q42538) Serine acetyltransferase 5 (EC 2.3.1.30) (AtSAT-5) (SAT-c)| (AtSERAT1;1) Length = 312 Score = 53.9 bits (128), Expect = 4e-07 Identities = 29/120 (24%), Positives = 41/120 (34%) Frame = +2 Query: 254 VWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQDALRDIL 433 +W ++ EA+ DAE EP L Y + C L L D+ Sbjct: 45 LWTQIKAEARRDAEAEPALASYLYSTILSHSSLERSISFHLGNKLC-SSTLLSTLLYDLF 103 Query: 434 VGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXXWSEGRRP 613 + ++ P T PAC HC L YKGF W++ R+P Sbjct: 104 LNTFSSDPSLRNATVADLRAARVRDPACISFSHCLLNYKGFLAIQAHRVSHKLWTQSRKP 163
>CYSE_SALTY (P29847) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 273 Score = 46.6 bits (109), Expect = 6e-05 Identities = 32/125 (25%), Positives = 47/125 (37%) Frame = +2 Query: 236 CNGGDQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQD 415 C + VW+ + EA+A A+ EP+L Y+ + +P Sbjct: 3 CEELEIVWKNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLA-SPIMPAI 61 Query: 416 ALRDILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXXW 595 A+R+++ A AA PE I PA K LY KGF W Sbjct: 62 AIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLW 121 Query: 596 SEGRR 610 ++GRR Sbjct: 122 NKGRR 126
>CYSE_SHIFL (P0A9D7) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 273 Score = 46.2 bits (108), Expect = 8e-05 Identities = 32/126 (25%), Positives = 46/126 (36%) Frame = +2 Query: 233 SCNGGDQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQ 412 SC + VW + EA+ A+ EP+L Y+ + +P Sbjct: 2 SCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLS-SPIMPA 60 Query: 413 DALRDILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXX 592 A+R+++ A AA PE I PA K LY KGF Sbjct: 61 IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL 120 Query: 593 WSEGRR 610 W++GRR Sbjct: 121 WNQGRR 126
>CYSE_ECOLI (P0A9D4) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 273 Score = 46.2 bits (108), Expect = 8e-05 Identities = 32/126 (25%), Positives = 46/126 (36%) Frame = +2 Query: 233 SCNGGDQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQ 412 SC + VW + EA+ A+ EP+L Y+ + +P Sbjct: 2 SCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLS-SPIMPA 60 Query: 413 DALRDILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXX 592 A+R+++ A AA PE I PA K LY KGF Sbjct: 61 IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL 120 Query: 593 WSEGRR 610 W++GRR Sbjct: 121 WNQGRR 126
>CYSE_ECOL6 (P0A9D5) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 273 Score = 46.2 bits (108), Expect = 8e-05 Identities = 32/126 (25%), Positives = 46/126 (36%) Frame = +2 Query: 233 SCNGGDQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQ 412 SC + VW + EA+ A+ EP+L Y+ + +P Sbjct: 2 SCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLS-SPIMPA 60 Query: 413 DALRDILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXX 592 A+R+++ A AA PE I PA K LY KGF Sbjct: 61 IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL 120 Query: 593 WSEGRR 610 W++GRR Sbjct: 121 WNQGRR 126
>CYSE_ECO57 (P0A9D6) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 273 Score = 46.2 bits (108), Expect = 8e-05 Identities = 32/126 (25%), Positives = 46/126 (36%) Frame = +2 Query: 233 SCNGGDQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQ 412 SC + VW + EA+ A+ EP+L Y+ + +P Sbjct: 2 SCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLS-SPIMPA 60 Query: 413 DALRDILVGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXX 592 A+R+++ A AA PE I PA K LY KGF Sbjct: 61 IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL 120 Query: 593 WSEGRR 610 W++GRR Sbjct: 121 WNQGRR 126
>CYSE_HAEIN (P43886) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 267 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/119 (21%), Positives = 42/119 (35%) Frame = +2 Query: 254 VWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQDALRDIL 433 VW+ + EA+ AE+EP+L ++ + +P +LR+I+ Sbjct: 5 VWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLA-NPIMPAISLREII 63 Query: 434 VGALAAHPEAIRHTXXXXXXXXXXXPACAKMVHCFLYYKGFXXXXXXXXXXXXWSEGRR 610 A ++P I PA LY KGF W++ R+ Sbjct: 64 EEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRK 122
>SAT2_ARATH (Q8S895) Serine acetyltransferase 2 (EC 2.3.1.30) (AtSAT-2)| (AtSERAT3;1) Length = 323 Score = 33.5 bits (75), Expect = 0.51 Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 1/122 (0%) Frame = +2 Query: 248 DQVWEELYGEAQADAEDEPLLGMLYYELVXXXXXXXXXXXXXXXXXXCIQGALPQDALRD 427 D +W+ + EA+ +AE EP+L Y + L L D Sbjct: 34 DPIWDAIREEAKLEAEKEPILSSFLYAGILAHDCLEQALGFVLANRLQNPTLLATQLL-D 92 Query: 428 ILVGALAAHPEAIRHTXXXXXXXXXXX-PACAKMVHCFLYYKGFXXXXXXXXXXXXWSEG 604 I G + H + I+ + PAC L+ KG+ W+EG Sbjct: 93 IFYGVMM-HDKGIQSSIRHDLQAFKDRDPACLSYSSAILHLKGYHALQAYRVAHKLWNEG 151 Query: 605 RR 610 R+ Sbjct: 152 RK 153
>UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog) Length = 963 Score = 33.1 bits (74), Expect = 0.67 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Frame = +2 Query: 143 CHRISRSIYRFMPDCTITAPTG-AAVNGSGGSCNGGD-------QVWEELYGEAQADAED 298 C RISR + + +PD ++P A NGS SC G D + +E E + ED Sbjct: 624 CDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGED 683 Query: 299 EP 304 EP Sbjct: 684 EP 685
>ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) Length = 450 Score = 32.0 bits (71), Expect = 1.5 Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 21/114 (18%) Frame = -3 Query: 616 RRPAALGPERVRGAVGLQGE---------------------EALVVEEAVDHLGACRVAV 500 RRP LGPER G VG + E + L +EE+ A R Sbjct: 248 RRPNGLGPERGVGRVGAEAEPLPVQLNGAPGEPAPAGPRDADGLDLEESSSSEHAERPPG 307 Query: 499 ARREEVGARVADRLRVRGQRADEDVPERVLRQRALDAQLCGQVRREGGLQRRVR 338 RR E G R + R + + +P R A G GG+ + R Sbjct: 308 PRRSERGPRAKSKARASQVKPGDSLPRRGPGAPGPGAPATGAGEERGGVAKASR 361
>ADA2A_BOVIN (Q28838) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2D adrenergic receptor) Length = 452 Score = 30.8 bits (68), Expect = 3.3 Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 21/108 (19%) Frame = -3 Query: 616 RRPAALGPER----------------VRGAVGL-----QGEEALVVEEAVDHLGACRVAV 500 RRP LGPER + GA G G +AL +EE+ A R Sbjct: 249 RRPNGLGPERGGVGPVGAEVESLQVQLNGAPGEPAPAGAGADALDLEESSSSEHAERPPG 308 Query: 499 ARREEVGARVADRLRVRGQRADEDVPERVLRQRALDAQLCGQVRREGG 356 +RR E G R + R + + +P R L A G G Sbjct: 309 SRRSERGPRAKGKARASQVKPGDSLPRRGPGATGLGAPTAGPAEERSG 356
>TRUA_CORGL (Q8NSV0) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 289 Score = 30.4 bits (67), Expect = 4.3 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = -3 Query: 568 LQGEEALVVEEAVDHLGACRVAVARREEVGARVADRLRVRGQRADEDVPERVLRQRALDA 389 L+ ++V+ E V+ + VA R + G A GQ A D+P L QR++D Sbjct: 32 LEDNLSMVLRETVE------LTVAGRTDAGVHAA------GQVAHFDIPAHALEQRSIDG 79 Query: 388 QLCGQVRREGGL 353 VRR G L Sbjct: 80 DPSKLVRRLGRL 91
>LRC24_HUMAN (Q50LG9) Leucine-rich repeat-containing protein 24 precursor| Length = 513 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +3 Query: 51 GAAAVPSHFLSLAARGRTWQPASTSGTQHTPATASPDPSTGS 176 GAA VP L A+R + QPA PA + P P GS Sbjct: 352 GAARVPFRLLVNASRQQPQQPAQPPPPAARPAGSEPRPEAGS 393
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = -3 Query: 607 AALGPERVRGAVGLQGEEALVVEEAVDHLGACRVAVARREEVGARVADR 461 AA P R RGA+G G E LV + V+H A + V G A+R Sbjct: 752 AARVPGRARGALGGLGAELLVGQRVVEHHHAHVLGVGYLPHPGGAAAER 800
>RECX_MYCSM (P94965) Regulatory protein recX| Length = 188 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Frame = -3 Query: 490 EEVGARVADRLRVRGQRADEDVPERVLRQRALDA-----QLCGQVRREG 359 ++V ARV DRL G DED E+ +R R L+A L ++R++G Sbjct: 60 DDVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKG 108
>GCYB1_RAT (P20595) Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)| (GCS-beta-1) (Soluble guanylate cyclase small subunit) Length = 619 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +2 Query: 239 NGGDQVWEELYGEAQADAEDEPLLGMLY-----YELV 334 N G +VWE++ EAQ D E + L+ ++Y Y+LV Sbjct: 16 NYGPEVWEDIKKEAQLDEEGQFLVRIIYDDSKTYDLV 52
>GCYB1_HUMAN (Q02153) Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)| (GCS-beta-1) (Soluble guanylate cyclase small subunit) (GCS-beta-3) Length = 619 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +2 Query: 239 NGGDQVWEELYGEAQADAEDEPLLGMLY-----YELV 334 N G +VWE++ EAQ D E + L+ ++Y Y+LV Sbjct: 16 NYGPEVWEDIKKEAQLDEEGQFLVRIIYDDSKTYDLV 52
>GCYB1_BOVIN (P16068) Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)| (GCS-beta-1) (Soluble guanylate cyclase small subunit) Length = 619 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +2 Query: 239 NGGDQVWEELYGEAQADAEDEPLLGMLY-----YELV 334 N G +VWE++ EAQ D E + L+ ++Y Y+LV Sbjct: 16 NYGPEVWEDIKKEAQLDEEGQFLVRIIYDDSKTYDLV 52
>GCYB1_MOUSE (O54865) Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)| (GCS-beta-1) (Soluble guanylate cyclase small subunit) Length = 620 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 5/37 (13%) Frame = +2 Query: 239 NGGDQVWEELYGEAQADAEDEPLLGMLY-----YELV 334 N G +VWE++ EAQ D E + L+ ++Y Y+LV Sbjct: 16 NYGPEVWEDIKKEAQLDEEGQFLVRIIYDDSKTYDLV 52
>ADA2A_MOUSE (Q01338) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) Length = 450 Score = 29.3 bits (64), Expect = 9.7 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 21/88 (23%) Frame = -3 Query: 616 RRPAALGPERVRGAVGLQGE---------------------EALVVEEAVDHLGACRVAV 500 RRP LGPER G G + E +AL +EE+ A R Sbjct: 248 RRPNGLGPERGAGPTGAEAEPLPTQLNGAPGEPAPAGPRDGDALDLEESSSSEHAERPPG 307 Query: 499 ARREEVGARVADRLRVRGQRADEDVPER 416 RR + G R + R + + +P R Sbjct: 308 PRRPDRGPRAKGKTRASQVKPGDSLPRR 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,736,645 Number of Sequences: 219361 Number of extensions: 860876 Number of successful extensions: 3930 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3914 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
