ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465691.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 127 bits (64), Expect = 4e-26 Identities = 251/313 (80%), Gaps = 9/313 (2%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 328 cttctacccgctcgccggccgcctccgcctcactcccggcaagaccaaccggtacgagct 387 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcgg 377 ||||||||| ||||||| |||| ||||||||| |||||| || | || |||| Sbjct: 388 cttctaccagccaggcgacgccgtcgccttcaccgtcgccgagcacgacgacggcgtcgg 447 Query: 378 cgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgcc 437 | |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| | ||| Sbjct: 448 tgtcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgcgcc 507 Query: 438 gcggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg---- 493 | ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 508 ggagctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcg 567 Query: 494 --gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccac 551 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 568 ccgcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccac 627 Query: 552 ccacttcctccat 564 |||||||||||| Sbjct: 628 gcacttcctccat 640 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 113 tcccgctcacctacatggacgccatgtggctccacacctcccccgtggagcgggtcttcc 172 |||||||||||| | ||||||| |||||||||| ||| | ||||| || |||||||||| Sbjct: 186 tcccgctcaccttcctggacgcgatgtggctcccgaccccgcccgtcgaccgggtcttcc 245 Query: 173 tct 175 ||| Sbjct: 246 tct 248
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 127 bits (64), Expect = 4e-26 Identities = 251/313 (80%), Gaps = 9/313 (2%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 16802268 cttctacccgctcgccggccgcctccgcctcactcccggcaagaccaaccggtacgagct 16802327 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcgg 377 ||||||||| ||||||| |||| ||||||||| |||||| || | || |||| Sbjct: 16802328 cttctaccagccaggcgacgccgtcgccttcaccgtcgccgagcacgacgacggcgtcgg 16802387 Query: 378 cgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgcc 437 | |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| | ||| Sbjct: 16802388 tgtcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgcgcc 16802447 Query: 438 gcggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg---- 493 | ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 16802448 ggagctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcg 16802507 Query: 494 --gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccac 551 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 16802508 ccgcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccac 16802567 Query: 552 ccacttcctccat 564 |||||||||||| Sbjct: 16802568 gcacttcctccat 16802580 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||| ||||| |||| ||||| ||| ||| | | |||||| |||||| Sbjct: 16935107 ccttctacccgctcgccagccgcatccgccccacgcccagcgagaccaaccggtacgagc 16935166 Query: 320 ttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcg 379 | | |||||||| ||||||||||| |||||||| |||||| || | | |||||| Sbjct: 16935167 tcctctaccagctcggcgacggcgtggcgttcaccgtcgccgagcacgacggcgtcggcg 16935226 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| Sbjct: 16935227 tcgacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccgg 16935286 Query: 440 ggctgccggagggcggcgcggtgttggctctgcagg 475 ||| || ||||||||||||||| | || ||||||| Sbjct: 16935287 agcttcccgagggcggcgcggtgctcgcgctgcagg 16935322 Score = 113 bits (57), Expect = 7e-22 Identities = 247/310 (79%), Gaps = 9/310 (2%) Strand = Plus / Minus Query: 263 tctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagcttc 322 ||||||||||||||||||||||||| | ||| || ||| | | |||||| ||||||| Sbjct: 16779496 tctacccgctcgccggccgcctccgcctcacgccgggcaagaccaaccggtacgagctct 16779437 Query: 323 actaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcggcg 379 ||||||||| ||||||| |||| ||||||| | |||||| || | || |||| | Sbjct: 16779436 tctaccagccaggcgacgccgtcgccttcaccttcgccgagcacgacgacggcgtcggtg 16779377 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| |||||| Sbjct: 16779376 tcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgtgccgg 16779317 Query: 440 ggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgc------cgtg 493 ||| ||||| |||||||||||| |||| ||||||| ||| |||||| | || Sbjct: 16779316 agctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcgcc 16779257 Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| | Sbjct: 16779256 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacgc 16779197 Query: 554 acttcctcca 563 |||||||||| Sbjct: 16779196 acttcctcca 16779187 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| ||||| ||||||| | | |||||| |||||| Sbjct: 16850149 ccttctacccgctcgccggccgcgtccgccccacgcccggcgagaccaaccggtacgagc 16850208 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 16850209 tcctctaccagcccggcgacggcgt 16850233 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| || || ||||||| | | |||||| |||||| Sbjct: 16826407 ccttctacccgctcgccggccgcgtccgcccaacgcccggcgagaccaaccggtacgagc 16826466 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 16826467 tcctctaccagcccggcgacggcgt 16826491 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| | Sbjct: 16850277 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccggag 16850336 Query: 442 ctgccggagggcggcgcgg 460 || || ||||||||||||| Sbjct: 16850337 cttcccgagggcggcgcgg 16850355 Score = 75.8 bits (38), Expect = 1e-10 Identities = 180/226 (79%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||| ||| ||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 16808737 cttctacccgctcaccgtccgcctccgccgcacgcccggcaaggccaaccggtacgagct 16808678 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||||| | || ||||||||| |||||| || | | |||| | Sbjct: 16808677 cttctaccagccaggcgacgccatcgccttcaccgtcgccgagcac-acggcgtcggtgt 16808619 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||| || |||| |||| |||||||||| | ||||| |||||| Sbjct: 16808618 cgatgagctggccacggatgacccgagggaggttgccaggattgagccgctcgtgccgga 16808559 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctg 486 ||| ||||| |||||||||||| |||| ||||||||||| ||||| Sbjct: 16808558 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctg 16808513 Score = 69.9 bits (35), Expect = 9e-09 Identities = 179/227 (78%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 16793049 cttctacccgctcgccggccgcctccgcctcacgcccggcaaggccaaccggtacgagct 16792990 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||| | |||| ||||||||| |||||| || | | |||| Sbjct: 16792989 cttctaccagcccggcgatgccgtcgccttcaccgtcgccgagcacgacgtcgtcggtct 16792930 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||||| | | |||| || ||| ||| || ||||| |||||| Sbjct: 16792929 cgatgagctggccacggacgttcgcagggaggtttccaagattgcgccgctcgtgccgga 16792870 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctgc 487 ||| ||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 16792869 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctgc 16792823 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| || | || ||| | Sbjct: 16826535 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgtcgttcgtcccggag 16826594 Query: 442 ctgccggagggcggcgcggtgttggctctgcagg 475 || || ||||||||||||||| | || ||||||| Sbjct: 16826595 cttcccgagggcggcgcggtgctcgcgctgcagg 16826628 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 16808493 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacga 16808434 Query: 554 acttcctcca 563 |||||||||| Sbjct: 16808433 acttcctcca 16808424 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 508 ggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttcctcca 563 ||||| ||||| |||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 16792796 ggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctccacgcacttcctcca 16792741 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 499 ctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttc 558 |||||| | ||||| ||||| |||||||||||||||||||| || |||| || |||||| Sbjct: 16906206 ctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctcgacgcacttc 16906265 Query: 559 ctcca 563 ||||| Sbjct: 16906266 ctcca 16906270 Score = 54.0 bits (27), Expect = 5e-04 Identities = 180/231 (77%) Strand = Plus / Plus Query: 250 gcgctgcgctccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaac 309 ||||| ||| ||||||||||||||||||||||| |||| | | | ||||| | | || Sbjct: 16905939 gcgctccgcgccttctacccgctcgccggccgcatccgcctcgcgcccgggaagaccgac 16905998 Query: 310 cggcacgagcttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccat 369 ||| ||||||| ||||||||| ||||||| ||| ||||||||| |||||| || | Sbjct: 16905999 cggtacgagctgttctaccagcccggcgacgcggtcgccttcaccgtcgccgagcacgac 16906058 Query: 370 cacatcggcgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccg 429 | ||||| |||||||| ||||||||||| || | ||| |||||| ||| || ||| Sbjct: 16906059 ggcgccggcgtcgacgagcttgccacggacgatcccagggaagttgccacgattgcgccg 16906118 Query: 430 ctggtgccgcggctgccggagggcggcgcggtgttggctctgcaggccacc 480 || |||||| ||| ||| ||||||||||||| | || ||||||||||| Sbjct: 16906119 ctagtgccggcgctcccgcggggcggcgcggtgctcgccgtgcaggccacc 16906169 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 113 tcccgctcacctacatggacgccatgtggctccacacctcccccgtggagcgggtcttcc 172 |||||||||||| | ||||||| |||||||||| ||| | ||||| || |||||||||| Sbjct: 16802126 tcccgctcaccttcctggacgcgatgtggctcccgaccccgcccgtcgaccgggtcttcc 16802185 Query: 173 tct 175 ||| Sbjct: 16802186 tct 16802188 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 cgtccaccacgccgcctgcgacgg 539 |||||||||| ||||||||||||| Sbjct: 16826675 cgtccaccactccgcctgcgacgg 16826698
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 127 bits (64), Expect = 4e-26 Identities = 251/313 (80%), Gaps = 9/313 (2%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 3325 cttctacccgctcgccggccgcctccgcctcactcccggcaagaccaaccggtacgagct 3384 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcgg 377 ||||||||| ||||||| |||| ||||||||| |||||| || | || |||| Sbjct: 3385 cttctaccagccaggcgacgccgtcgccttcaccgtcgccgagcacgacgacggcgtcgg 3444 Query: 378 cgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgcc 437 | |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| | ||| Sbjct: 3445 tgtcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgcgcc 3504 Query: 438 gcggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg---- 493 | ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 3505 ggagctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcg 3564 Query: 494 --gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccac 551 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 3565 ccgcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccac 3624 Query: 552 ccacttcctccat 564 |||||||||||| Sbjct: 3625 gcacttcctccat 3637 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||| ||||| |||| ||||| ||| ||| | | |||||| |||||| Sbjct: 136164 ccttctacccgctcgccagccgcatccgccccacgcccagcgagaccaaccggtacgagc 136223 Query: 320 ttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcg 379 | | |||||||| ||||||||||| |||||||| |||||| || | | |||||| Sbjct: 136224 tcctctaccagctcggcgacggcgtggcgttcaccgtcgccgagcacgacggcgtcggcg 136283 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| Sbjct: 136284 tcgacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccgg 136343 Query: 440 ggctgccggagggcggcgcggtgttggctctgcagg 475 ||| || ||||||||||||||| | || ||||||| Sbjct: 136344 agcttcccgagggcggcgcggtgctcgcgctgcagg 136379 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| ||||| ||||||| | | |||||| |||||| Sbjct: 51206 ccttctacccgctcgccggccgcgtccgccccacgcccggcgagaccaaccggtacgagc 51265 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 51266 tcctctaccagcccggcgacggcgt 51290 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| || || ||||||| | | |||||| |||||| Sbjct: 27464 ccttctacccgctcgccggccgcgtccgcccaacgcccggcgagaccaaccggtacgagc 27523 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 27524 tcctctaccagcccggcgacggcgt 27548 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| | Sbjct: 51334 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccggag 51393 Query: 442 ctgccggagggcggcgcgg 460 || || ||||||||||||| Sbjct: 51394 cttcccgagggcggcgcgg 51412 Score = 75.8 bits (38), Expect = 1e-10 Identities = 180/226 (79%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||| ||| ||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 9794 cttctacccgctcaccgtccgcctccgccgcacgcccggcaaggccaaccggtacgagct 9735 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||||| | || ||||||||| |||||| || | | |||| | Sbjct: 9734 cttctaccagccaggcgacgccatcgccttcaccgtcgccgagcac-acggcgtcggtgt 9676 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||| || |||| |||| |||||||||| | ||||| |||||| Sbjct: 9675 cgatgagctggccacggatgacccgagggaggttgccaggattgagccgctcgtgccgga 9616 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctg 486 ||| ||||| |||||||||||| |||| ||||||||||| ||||| Sbjct: 9615 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctg 9570 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| || | || ||| | Sbjct: 27592 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgtcgttcgtcccggag 27651 Query: 442 ctgccggagggcggcgcggtgttggctctgcagg 475 || || ||||||||||||||| | || ||||||| Sbjct: 27652 cttcccgagggcggcgcggtgctcgcgctgcagg 27685 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 9550 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacga 9491 Query: 554 acttcctcca 563 |||||||||| Sbjct: 9490 acttcctcca 9481 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 499 ctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttc 558 |||||| | ||||| ||||| |||||||||||||||||||| || |||| || |||||| Sbjct: 107263 ctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctcgacgcacttc 107322 Query: 559 ctcca 563 ||||| Sbjct: 107323 ctcca 107327 Score = 54.0 bits (27), Expect = 5e-04 Identities = 180/231 (77%) Strand = Plus / Plus Query: 250 gcgctgcgctccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaac 309 ||||| ||| ||||||||||||||||||||||| |||| | | | ||||| | | || Sbjct: 106996 gcgctccgcgccttctacccgctcgccggccgcatccgcctcgcgcccgggaagaccgac 107055 Query: 310 cggcacgagcttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccat 369 ||| ||||||| ||||||||| ||||||| ||| ||||||||| |||||| || | Sbjct: 107056 cggtacgagctgttctaccagcccggcgacgcggtcgccttcaccgtcgccgagcacgac 107115 Query: 370 cacatcggcgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccg 429 | ||||| |||||||| ||||||||||| || | ||| |||||| ||| || ||| Sbjct: 107116 ggcgccggcgtcgacgagcttgccacggacgatcccagggaagttgccacgattgcgccg 107175 Query: 430 ctggtgccgcggctgccggagggcggcgcggtgttggctctgcaggccacc 480 || |||||| ||| ||| ||||||||||||| | || ||||||||||| Sbjct: 107176 ctagtgccggcgctcccgcggggcggcgcggtgctcgccgtgcaggccacc 107226 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 113 tcccgctcacctacatggacgccatgtggctccacacctcccccgtggagcgggtcttcc 172 |||||||||||| | ||||||| |||||||||| ||| | ||||| || |||||||||| Sbjct: 3183 tcccgctcaccttcctggacgcgatgtggctcccgaccccgcccgtcgaccgggtcttcc 3242 Query: 173 tct 175 ||| Sbjct: 3243 tct 3245 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 cgtccaccacgccgcctgcgacgg 539 |||||||||| ||||||||||||| Sbjct: 27732 cgtccaccactccgcctgcgacgg 27755
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 127 bits (64), Expect = 4e-26 Identities = 251/313 (80%), Gaps = 9/313 (2%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 50510 cttctacccgctcgccggccgcctccgcctcactcccggcaagaccaaccggtacgagct 50569 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcgg 377 ||||||||| ||||||| |||| ||||||||| |||||| || | || |||| Sbjct: 50570 cttctaccagccaggcgacgccgtcgccttcaccgtcgccgagcacgacgacggcgtcgg 50629 Query: 378 cgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgcc 437 | |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| | ||| Sbjct: 50630 tgtcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgcgcc 50689 Query: 438 gcggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg---- 493 | ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 50690 ggagctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcg 50749 Query: 494 --gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccac 551 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 50750 ccgcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccac 50809 Query: 552 ccacttcctccat 564 |||||||||||| Sbjct: 50810 gcacttcctccat 50822 Score = 113 bits (57), Expect = 7e-22 Identities = 247/310 (79%), Gaps = 9/310 (2%) Strand = Plus / Minus Query: 263 tctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagcttc 322 ||||||||||||||||||||||||| | ||| || ||| | | |||||| ||||||| Sbjct: 27738 tctacccgctcgccggccgcctccgcctcacgccgggcaagaccaaccggtacgagctct 27679 Query: 323 actaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcggcg 379 ||||||||| ||||||| |||| ||||||| | |||||| || | || |||| | Sbjct: 27678 tctaccagccaggcgacgccgtcgccttcaccttcgccgagcacgacgacggcgtcggtg 27619 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| |||||| Sbjct: 27618 tcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgtgccgg 27559 Query: 440 ggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgc------cgtg 493 ||| ||||| |||||||||||| |||| ||||||| ||| |||||| | || Sbjct: 27558 agctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcgcc 27499 Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| | Sbjct: 27498 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacgc 27439 Query: 554 acttcctcca 563 |||||||||| Sbjct: 27438 acttcctcca 27429 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| ||||| ||||||| | | |||||| |||||| Sbjct: 98391 ccttctacccgctcgccggccgcgtccgccccacgcccggcgagaccaaccggtacgagc 98450 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 98451 tcctctaccagcccggcgacggcgt 98475 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| || || ||||||| | | |||||| |||||| Sbjct: 74649 ccttctacccgctcgccggccgcgtccgcccaacgcccggcgagaccaaccggtacgagc 74708 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 74709 tcctctaccagcccggcgacggcgt 74733 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| | Sbjct: 98519 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccggag 98578 Query: 442 ctgccggagggcggcgcgg 460 || || ||||||||||||| Sbjct: 98579 cttcccgagggcggcgcgg 98597 Score = 75.8 bits (38), Expect = 1e-10 Identities = 180/226 (79%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||| ||| ||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 56979 cttctacccgctcaccgtccgcctccgccgcacgcccggcaaggccaaccggtacgagct 56920 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||||| | || ||||||||| |||||| || | | |||| | Sbjct: 56919 cttctaccagccaggcgacgccatcgccttcaccgtcgccgagcac-acggcgtcggtgt 56861 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||| || |||| |||| |||||||||| | ||||| |||||| Sbjct: 56860 cgatgagctggccacggatgacccgagggaggttgccaggattgagccgctcgtgccgga 56801 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctg 486 ||| ||||| |||||||||||| |||| ||||||||||| ||||| Sbjct: 56800 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctg 56755 Score = 69.9 bits (35), Expect = 9e-09 Identities = 179/227 (78%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 41291 cttctacccgctcgccggccgcctccgcctcacgcccggcaaggccaaccggtacgagct 41232 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||| | |||| ||||||||| |||||| || | | |||| Sbjct: 41231 cttctaccagcccggcgatgccgtcgccttcaccgtcgccgagcacgacgtcgtcggtct 41172 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||||| | | |||| || ||| ||| || ||||| |||||| Sbjct: 41171 cgatgagctggccacggacgttcgcagggaggtttccaagattgcgccgctcgtgccgga 41112 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctgc 487 ||| ||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 41111 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctgc 41065 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| || | || ||| | Sbjct: 74777 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgtcgttcgtcccggag 74836 Query: 442 ctgccggagggcggcgcggtgttggctctgcagg 475 || || ||||||||||||||| | || ||||||| Sbjct: 74837 cttcccgagggcggcgcggtgctcgcgctgcagg 74870 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 56735 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacga 56676 Query: 554 acttcctcca 563 |||||||||| Sbjct: 56675 acttcctcca 56666 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 508 ggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttcctcca 563 ||||| ||||| |||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 41038 ggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctccacgcacttcctcca 40983 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 113 tcccgctcacctacatggacgccatgtggctccacacctcccccgtggagcgggtcttcc 172 |||||||||||| | ||||||| |||||||||| ||| | ||||| || |||||||||| Sbjct: 50368 tcccgctcaccttcctggacgcgatgtggctcccgaccccgcccgtcgaccgggtcttcc 50427 Query: 173 tct 175 ||| Sbjct: 50428 tct 50430 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 516 cgtccaccacgccgcctgcgacggaacgtgctccacccacttcctcca 563 |||||||||| ||||||||||||| | |||| || ||||||||||| Sbjct: 74917 cgtccaccactccgcctgcgacggggtgggctcgacgcacttcctcca 74964
>dbj|AK103832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A21, full insert sequence Length = 1790 Score = 127 bits (64), Expect = 4e-26 Identities = 251/313 (80%), Gaps = 9/313 (2%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 327 cttctacccgctcgccggccgcctccgcctcactcccggcaagaccaaccggtacgagct 386 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcgg 377 ||||||||| ||||||| |||| ||||||||| |||||| || | || |||| Sbjct: 387 cttctaccagccaggcgacgccgtcgccttcaccgtcgccgagcacgacgacggcgtcgg 446 Query: 378 cgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgcc 437 | |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| | ||| Sbjct: 447 tgtcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgcgcc 506 Query: 438 gcggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg---- 493 | ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 507 ggagctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcg 566 Query: 494 --gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccac 551 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 567 ccgcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccac 626 Query: 552 ccacttcctccat 564 |||||||||||| Sbjct: 627 gcacttcctccat 639 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 113 tcccgctcacctacatggacgccatgtggctccacacctcccccgtggagcgggtcttcc 172 |||||||||||| | ||||||| |||||||||| ||| | ||||| || |||||||||| Sbjct: 185 tcccgctcaccttcctggacgcgatgtggctcccgaccccgcccgtcgaccgggtcttcc 244 Query: 173 tct 175 ||| Sbjct: 245 tct 247
>ref|XM_465709.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||| ||||| |||| ||||| ||| ||| | | |||||| |||||| Sbjct: 260 ccttctacccgctcgccagccgcatccgccccacgcccagcgagaccaaccggtacgagc 319 Query: 320 ttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcg 379 | | |||||||| ||||||||||| |||||||| |||||| || | | |||||| Sbjct: 320 tcctctaccagctcggcgacggcgtggcgttcaccgtcgccgagcacgacggcgtcggcg 379 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| Sbjct: 380 tcgacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccgg 439 Query: 440 ggctgccggagggcggcgcggtgttggctctgcagg 475 ||| || ||||||||||||||| | || ||||||| Sbjct: 440 agcttcccgagggcggcgcggtgctcgcgctgcagg 475
>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1089_A02 Length = 117908 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||| ||||| |||| ||||| ||| ||| | | |||||| |||||| Sbjct: 77212 ccttctacccgctcgccagccgcatccgccccacgcccagcgagaccaaccggtacgagc 77271 Query: 320 ttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcg 379 | | |||||||| ||||||||||| |||||||| |||||| || | | |||||| Sbjct: 77272 tcctctaccagctcggcgacggcgtggcgttcaccgtcgccgagcacgacggcgtcggcg 77331 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| Sbjct: 77332 tcgacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccgg 77391 Query: 440 ggctgccggagggcggcgcggtgttggctctgcagg 475 ||| || ||||||||||||||| | || ||||||| Sbjct: 77392 agcttcccgagggcggcgcggtgctcgcgctgcagg 77427 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 499 ctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttc 558 |||||| | ||||| ||||| |||||||||||||||||||| || |||| || |||||| Sbjct: 48311 ctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctcgacgcacttc 48370 Query: 559 ctcca 563 ||||| Sbjct: 48371 ctcca 48375 Score = 54.0 bits (27), Expect = 5e-04 Identities = 180/231 (77%) Strand = Plus / Plus Query: 250 gcgctgcgctccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaac 309 ||||| ||| ||||||||||||||||||||||| |||| | | | ||||| | | || Sbjct: 48044 gcgctccgcgccttctacccgctcgccggccgcatccgcctcgcgcccgggaagaccgac 48103 Query: 310 cggcacgagcttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccat 369 ||| ||||||| ||||||||| ||||||| ||| ||||||||| |||||| || | Sbjct: 48104 cggtacgagctgttctaccagcccggcgacgcggtcgccttcaccgtcgccgagcacgac 48163 Query: 370 cacatcggcgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccg 429 | ||||| |||||||| ||||||||||| || | ||| |||||| ||| || ||| Sbjct: 48164 ggcgccggcgtcgacgagcttgccacggacgatcccagggaagttgccacgattgcgccg 48223 Query: 430 ctggtgccgcggctgccggagggcggcgcggtgttggctctgcaggccacc 480 || |||||| ||| ||| ||||||||||||| | || ||||||||||| Sbjct: 48224 ctagtgccggcgctcccgcggggcggcgcggtgctcgccgtgcaggccacc 48274
>ref|XM_465684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1745 Score = 113 bits (57), Expect = 7e-22 Identities = 247/310 (79%), Gaps = 9/310 (2%) Strand = Plus / Plus Query: 263 tctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagcttc 322 ||||||||||||||||||||||||| | ||| || ||| | | |||||| ||||||| Sbjct: 319 tctacccgctcgccggccgcctccgcctcacgccgggcaagaccaaccggtacgagctct 378 Query: 323 actaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcggcg 379 ||||||||| ||||||| |||| ||||||| | |||||| || | || |||| | Sbjct: 379 tctaccagccaggcgacgccgtcgccttcaccttcgccgagcacgacgacggcgtcggtg 438 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| |||||| Sbjct: 439 tcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgtgccgg 498 Query: 440 ggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg------ 493 ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 499 agctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcgcc 558 Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| | Sbjct: 559 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacgc 618 Query: 554 acttcctcca 563 |||||||||| Sbjct: 619 acttcctcca 628
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 113 bits (57), Expect = 7e-22 Identities = 247/310 (79%), Gaps = 9/310 (2%) Strand = Plus / Minus Query: 263 tctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagcttc 322 ||||||||||||||||||||||||| | ||| || ||| | | |||||| ||||||| Sbjct: 156551 tctacccgctcgccggccgcctccgcctcacgccgggcaagaccaaccggtacgagctct 156492 Query: 323 actaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcggcg 379 ||||||||| ||||||| |||| ||||||| | |||||| || | || |||| | Sbjct: 156491 tctaccagccaggcgacgccgtcgccttcaccttcgccgagcacgacgacggcgtcggtg 156432 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| |||||| Sbjct: 156431 tcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgtgccgg 156372 Query: 440 ggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgc------cgtg 493 ||| ||||| |||||||||||| |||| ||||||| ||| |||||| | || Sbjct: 156371 agctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcgcc 156312 Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| | Sbjct: 156311 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacgc 156252 Query: 554 acttcctcca 563 |||||||||| Sbjct: 156251 acttcctcca 156242
>dbj|AK103708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O19, full insert sequence Length = 1745 Score = 113 bits (57), Expect = 7e-22 Identities = 247/310 (79%), Gaps = 9/310 (2%) Strand = Plus / Plus Query: 263 tctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagcttc 322 ||||||||||||||||||||||||| | ||| || ||| | | |||||| ||||||| Sbjct: 319 tctacccgctcgccggccgcctccgcctcacgccgggcaagaccaaccggtacgagctct 378 Query: 323 actaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcaca---tcggcg 379 ||||||||| ||||||| |||| ||||||| | |||||| || | || |||| | Sbjct: 379 tctaccagccaggcgacgccgtcgccttcaccttcgccgagcacgacgacggcgtcggtg 438 Query: 380 cggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgc 439 |||||||| ||| ||||||| |||| |||| | |||| |||||||||||| |||||| Sbjct: 439 tcgacgagctggccgcggacgacccgagggaggtcgccaagatcgccccgctcgtgccgg 498 Query: 440 ggctgccggagggcggcgcggtgttggctctgcaggccaccctgctgcgccgtg------ 493 ||| ||||| |||||||||||| |||| ||||||| ||| |||||| || | Sbjct: 499 agctcccggatggcggcgcggtgctggccgtgcaggctaccgtgctgccccccgcgcgcc 558 Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| | Sbjct: 559 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacgc 618 Query: 554 acttcctcca 563 |||||||||| Sbjct: 619 acttcctcca 628
>ref|XM_465703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| ||||| ||||||| | | |||||| |||||| Sbjct: 245 ccttctacccgctcgccggccgcgtccgccccacgcccggcgagaccaaccggtacgagc 304 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 305 tcctctaccagcccggcgacggcgt 329 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| ||||| || ||| | Sbjct: 373 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccggag 432 Query: 442 ctgccggagggcggcgcgg 460 || || ||||||||||||| Sbjct: 433 cttcccgagggcggcgcgg 451
>ref|XM_465699.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1473 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| || || ||||||| | | |||||| |||||| Sbjct: 251 ccttctacccgctcgccggccgcgtccgcccaacgcccggcgagaccaaccggtacgagc 310 Query: 320 ttcactaccagccgggcgacggcgt 344 | | ||||||||| ||||||||||| Sbjct: 311 tcctctaccagcccggcgacggcgt 335 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 ||||||||||||||||||||||||| |||||| |||| |||||| || | || ||| | Sbjct: 379 gacgagctcgccacggacgagccgagggagctcgccaagatcgcgtcgttcgtcccggag 438 Query: 442 ctgccggagggcggcgcggtgttggctctgcagg 475 || || ||||||||||||||| | || ||||||| Sbjct: 439 cttcccgagggcggcgcggtgctcgcgctgcagg 472 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 cgtccaccacgccgcctgcgacgg 539 |||||||||| ||||||||||||| Sbjct: 519 cgtccaccactccgcctgcgacgg 542
>ref|XM_465693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1188 Score = 75.8 bits (38), Expect = 1e-10 Identities = 180/226 (79%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||| ||| ||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 132 cttctacccgctcaccgtccgcctccgccgcacgcccggcaaggccaaccggtacgagct 191 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||||| | || ||||||||| |||||| || | | |||| | Sbjct: 192 cttctaccagccaggcgacgccatcgccttcaccgtcgccgagcac-acggcgtcggtgt 250 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||| || |||| |||| |||||||||| | ||||| |||||| Sbjct: 251 cgatgagctggccacggatgacccgagggaggttgccaggattgagccgctcgtgccgga 310 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctg 486 ||| ||||| |||||||||||| |||| ||||||||||| ||||| Sbjct: 311 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctg 356 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 494 gcggcctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccaccc 553 ||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 376 gcggcctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggctcgagctccacga 435 Query: 554 acttcctcca 563 |||||||||| Sbjct: 436 acttcctcca 445
>ref|XM_473803.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 239 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 298 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 299 tcttctaccagcccggcgacggcgt 323 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 381 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 440 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 441 cggcgcggtgctcgcgttgcaggccaccgtgctgc 475
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 119850 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 119791 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 119790 tcttctaccagcccggcgacggcgt 119766 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 119708 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 119649 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 119648 cggcgcggtgctcgcgttgcaggccaccgtgctgc 119614
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 47873 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 47814 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 47813 tcttctaccagcccggcgacggcgt 47789 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 47731 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 47672 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 47671 cggcgcggtgctcgcgttgcaggccaccgtgctgc 47637
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 30644142 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 30644083 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 30644082 tcttctaccagcccggcgacggcgt 30644058 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 30644000 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 30643941 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 30643940 cggcgcggtgctcgcgttgcaggccaccgtgctgc 30643906 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 18269428 cttctacccgctggccggccgcctc 18269404
>dbj|AK105836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E12, full insert sequence Length = 1511 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 249 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 308 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 309 tcttctaccagcccggcgacggcgt 333 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 391 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 450 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 451 cggcgcggtgctcgcgttgcaggccaccgtgctgc 485
>dbj|AK073495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F12, full insert sequence Length = 1526 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagc 319 ||||||||||||||||||||||| |||| | ||| ||||||| | | |||||| |||||| Sbjct: 264 ccttctacccgctcgccggccgcgtccgcctcacgcccggcgagaccaaccggtacgagc 323 Query: 320 ttcactaccagccgggcgacggcgt 344 | ||||||||| ||||||||||| Sbjct: 324 tcttctaccagcccggcgacggcgt 348 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 393 cacggacgagccgacggagcttgccaggatcgccccgctggtgccgcggctgccggaggg 452 |||||||||||||| |||| |||||||||| ||| || | || ||| ||| ||| |||| Sbjct: 406 cacggacgagccgagggaggttgccaggattgccacgttcgtcccggagctcccgaaggg 465 Query: 453 cggcgcggtgttggctctgcaggccaccctgctgc 487 |||||||||| | || ||||||||||| |||||| Sbjct: 466 cggcgcggtgctcgcgttgcaggccaccgtgctgc 500
>ref|XM_465687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 69.9 bits (35), Expect = 9e-09 Identities = 179/227 (78%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccggcccacccccggcgcgcctaaccggcacgagct 320 ||||||||||||||||||||||||||| | ||| |||||| | | |||||| ||||||| Sbjct: 258 cttctacccgctcgccggccgcctccgcctcacgcccggcaaggccaaccggtacgagct 317 Query: 321 tcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccatcacatcggcgc 380 ||||||||| ||||| | |||| ||||||||| |||||| || | | |||| Sbjct: 318 cttctaccagcccggcgatgccgtcgccttcaccgtcgccgagcacgacgtcgtcggtct 377 Query: 381 ggacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcg 440 || ||||| |||||||||| | | |||| || ||| ||| || ||||| |||||| Sbjct: 378 cgatgagctggccacggacgttcgcagggaggtttccaagattgcgccgctcgtgccgga 437 Query: 441 gctgccggagggcggcgcggtgttggctctgcaggccaccctgctgc 487 ||| ||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 438 gctcccggatggcggcgcggtgctggccgtgcaggccaccgtgctgc 484 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 508 ggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttcctcca 563 ||||| ||||| |||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 511 ggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctccacgcacttcctcca 566
>ref|XM_465706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 499 ctcgccgttggcgtgaccgtccaccacgccgcctgcgacggaacgtgctccacccacttc 558 |||||| | ||||| ||||| |||||||||||||||||||| || |||| || |||||| Sbjct: 484 ctcgccctcggcgtcaccgtgcaccacgccgcctgcgacggcgcgagctcgacgcacttc 543 Query: 559 ctcca 563 ||||| Sbjct: 544 ctcca 548 Score = 54.0 bits (27), Expect = 5e-04 Identities = 180/231 (77%) Strand = Plus / Plus Query: 250 gcgctgcgctccttctacccgctcgccggccgcctccggcccacccccggcgcgcctaac 309 ||||| ||| ||||||||||||||||||||||| |||| | | | ||||| | | || Sbjct: 217 gcgctccgcgccttctacccgctcgccggccgcatccgcctcgcgcccgggaagaccgac 276 Query: 310 cggcacgagcttcactaccagccgggcgacggcgtcagcttcaccgtggccgagtaccat 369 ||| ||||||| ||||||||| ||||||| ||| ||||||||| |||||| || | Sbjct: 277 cggtacgagctgttctaccagcccggcgacgcggtcgccttcaccgtcgccgagcacgac 336 Query: 370 cacatcggcgcggacgagctcgccacggacgagccgacggagcttgccaggatcgccccg 429 | ||||| |||||||| ||||||||||| || | ||| |||||| ||| || ||| Sbjct: 337 ggcgccggcgtcgacgagcttgccacggacgatcccagggaagttgccacgattgcgccg 396 Query: 430 ctggtgccgcggctgccggagggcggcgcggtgttggctctgcaggccacc 480 || |||||| ||| ||| ||||||||||||| | || ||||||||||| Sbjct: 397 ctagtgccggcgctcccgcggggcggcgcggtgctcgccgtgcaggccacc 447
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 |||||||| |||||||| || |||| |||| |||||| ||| || ||||| |||||| | Sbjct: 138969 gacgagctggccacggatgacccgagggaggttgccaagattgcgccgctcgtgccggcg 139028 Query: 442 ctgccggagggcggcgcggtg 462 || ||| |||||||||||||| Sbjct: 139029 ctcccgtagggcggcgcggtg 139049 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 gcctcgccgttggcgtgaccgtccaccacgccgcctgcgacgg 539 |||||||| | ||||| || || |||||||||||||||||||| Sbjct: 139096 gcctcgccctcggcgtcactgtgcaccacgccgcctgcgacgg 139138 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 4110734 ccttctaccccctcgccggccgcttccg 4110707
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 |||||||| |||||||| || |||| |||| |||||| ||| || ||||| |||||| | Sbjct: 138969 gacgagctggccacggatgacccgagggaggttgccaagattgcgccgctcgtgccggcg 139028 Query: 442 ctgccggagggcggcgcggtg 462 || ||| |||||||||||||| Sbjct: 139029 ctcccgtagggcggcgcggtg 139049 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 gcctcgccgttggcgtgaccgtccaccacgccgcctgcgacgg 539 |||||||| | ||||| || || |||||||||||||||||||| Sbjct: 139096 gcctcgccctcggcgtcactgtgcaccacgccgcctgcgacgg 139138 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 4119428 ccttctaccccctcgccggccgcttccg 4119401
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 382 gacgagctcgccacggacgagccgacggagcttgccaggatcgccccgctggtgccgcgg 441 |||||||| |||||||| || |||| |||| |||||| ||| || ||||| |||||| | Sbjct: 138969 gacgagctggccacggatgacccgagggaggttgccaagattgcgccgctcgtgccggcg 139028 Query: 442 ctgccggagggcggcgcggtg 462 || ||| |||||||||||||| Sbjct: 139029 ctcccgtagggcggcgcggtg 139049 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 497 gcctcgccgttggcgtgaccgtccaccacgccgcctgcgacgg 539 |||||||| | ||||| || || |||||||||||||||||||| Sbjct: 139096 gcctcgccctcggcgtcactgtgcaccacgccgcctgcgacgg 139138
>ref|XM_449460.1| Candida glabrata CBS138 hypothetical protein (CAGL0M02607g) partial mRNA Length = 3615 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 564 tgcgtgggcgtgggcggcggcgtc 587 |||||||||||||||||||||||| Sbjct: 401 tgcgtgggcgtgggcggcggcgtc 378
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 564 tgcgtgggcgtgggcggcggcgtc 587 |||||||||||||||||||||||| Sbjct: 301774 tgcgtgggcgtgggcggcggcgtc 301797
>ref|XM_483799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1710 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 314 cttctacccgctcgccggccgcatccg 340
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccg 287 ||||||||||||||||||||| ||||| Sbjct: 70410 cttctacccgctcgccggccggctccg 70436
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 28157775 cttctacccgctcgccggccgcatccg 28157749 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 627598 cttctacccgctggccggccgcctc 627574
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccg 287 ||||||||||||||||||||| ||||| Sbjct: 14439702 cttctacccgctcgccggccggctccg 14439728
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 155270 cttctacccgctcgccggccgcatccg 155244
>dbj|AK109443.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A03, full insert sequence Length = 1649 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 289 cttctacccgctcgccggccgcatccg 315
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 41248 cttctacccgctcgccggccgcatccg 41222
>dbj|AK063515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G07, full insert sequence Length = 2418 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccg 287 |||||||||||||||||||||| |||| Sbjct: 371 cttctacccgctcgccggccgcatccg 397
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 257 gctccttctacccgctcgccggccgcctcc 286 |||||||||||||||||||| ||||||||| Sbjct: 138168 gctccttctacccgctcgcc-gccgcctcc 138196
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctc 285 |||||||||| ||||||||||||||| Sbjct: 4280193 ccttctaccccctcgccggccgcctc 4280218 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctacccgctcgccggccgcctccg 287 |||||| ||||||||||||||||| Sbjct: 29537149 ctaccccctcgccggccgcctccg 29537126 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ttctacccgctcgccggccgcctc 285 ||||||||| |||||||||||||| Sbjct: 4313692 ttctacccggtcgccggccgcctc 4313669 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttctacccgctcgccggccg 281 |||||||||||||||||||| Sbjct: 4297826 ttctacccgctcgccggccg 4297845
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 cgccgtggcggcctcgccgttg 508 |||||||||||||||||||||| Sbjct: 22144367 cgccgtggcggcctcgccgttg 22144346
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctc 285 |||||||||| ||||||||||||||| Sbjct: 125414 ccttctaccccctcgccggccgcctc 125439 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ttctacccgctcgccggccgcctc 285 ||||||||| |||||||||||||| Sbjct: 158913 ttctacccggtcgccggccgcctc 158890 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttctacccgctcgccggccg 281 |||||||||||||||||||| Sbjct: 143047 ttctacccgctcgccggccg 143066
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 421 atcgccccgctggtgccgcggctgccggag 450 ||||||| ||||||||||| |||||||||| Sbjct: 4628219 atcgcccggctggtgccgctgctgccggag 4628248 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ccaccacgcgcacgagcacgacga 200 |||||||||| ||||||||||||| Sbjct: 5202580 ccaccacgcggacgagcacgacga 5202557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcgccggccgcctccggcc 290 |||||||||||||||||||| Sbjct: 1542823 ctcgccggccgcctccggcc 1542804
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 cgccgtggcggcctcgccgttg 508 |||||||||||||||||||||| Sbjct: 39853 cgccgtggcggcctcgccgttg 39832
>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full insert sequence Length = 1500 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctc 285 |||||||||| ||||||||||||||| Sbjct: 261 ccttctaccccctcgccggccgcctc 286
>ref|XM_479745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 225 cttctacccgctggccggccgcctc 249
>ref|XM_472181.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 225 cttctacccgctggccggccgcctc 249
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gtggcggcctcgccgttggcg 511 ||||||||||||||||||||| Sbjct: 273967 gtggcggcctcgccgttggcg 273987
>gb|AC123048.4| Mus musculus BAC clone RP24-394D5 from chromosome 18, complete sequence Length = 148673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 cctcctctccaacctccagga 236 ||||||||||||||||||||| Sbjct: 78452 cctcctctccaacctccagga 78472
>gb|AC107667.12| Mus musculus chromosome 3, clone RP23-187C2, complete sequence Length = 229632 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 ttcccctccccgagctctctctccc 116 ||||||||||||||||||| ||||| Sbjct: 62980 ttcccctccccgagctctccctccc 63004
>gb|AC125097.3| Mus musculus BAC clone RP24-188J11 from chromosome 3, complete sequence Length = 178057 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ttcccctccccgagctctctctccc 116 ||||||||||||||||||| ||||| Sbjct: 33807 ttcccctccccgagctctccctccc 33783
>gb|BC062354.1| Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B, mRNA (cDNA clone IMAGE:4643626), complete cds Length = 1699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 cgcggctgccggagggcggcg 457 ||||||||||||||||||||| Sbjct: 27 cgcggctgccggagggcggcg 7
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 gaccgtccaccacgccgcctgcgac 537 ||||||||||||| ||||||||||| Sbjct: 147450 gaccgtccaccacaccgcctgcgac 147426
>gb|AE008786.1| Salmonella typhimurium LT2, section 90 of 220 of the complete genome Length = 22099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ggcggcctcgccgttggcgtg 513 ||||||||||||||||||||| Sbjct: 3612 ggcggcctcgccgttggcgtg 3592
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gtggcggcctcgccgttggcg 511 ||||||||||||||||||||| Sbjct: 273853 gtggcggcctcgccgttggcg 273873
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gtggcggcctcgccgttggcg 511 ||||||||||||||||||||| Sbjct: 272177 gtggcggcctcgccgttggcg 272197
>gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, complete sequence Length = 193537 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 cgcggctgccggagggcggcg 457 ||||||||||||||||||||| Sbjct: 147394 cgcggctgccggagggcggcg 147414
>dbj|AB235153.1| Homo sapiens KIAA2008 mRNA for hypothetical protein, partial cds Length = 4491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 cgcggctgccggagggcggcg 457 ||||||||||||||||||||| Sbjct: 395 cgcggctgccggagggcggcg 375
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 ggcggcctcgccgttggcgtg 513 ||||||||||||||||||||| Sbjct: 1012703 ggcggcctcgccgttggcgtg 1012723
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 54976 cttctacccgctggccggccgcctc 54952
>gb|AF213176.1|AF213176 Salmonella typhimurium trehalose biosynthesis operon, complete sequence Length = 3383 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 ggcggcctcgccgttggcgtg 513 ||||||||||||||||||||| Sbjct: 1957 ggcggcctcgccgttggcgtg 1977
>gb|AF159260.1|AF159260 Chlamydomonas reinhardtii inner dynein arm I1 intermediate chain IC140 (IDA7) gene, complete cds Length = 7077 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 cgccggtgccctcctctccaacctc 231 |||||||||||||||||||| |||| Sbjct: 1386 cgccggtgccctcctctccatcctc 1362
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ggcggcctcgccgttggcgtg 513 ||||||||||||||||||||| Sbjct: 2047240 ggcggcctcgccgttggcgtg 2047220
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cttctacccgctcgccggccgcctc 285 |||||||||||| |||||||||||| Sbjct: 105102 cttctacccgctggccggccgcctc 105078
>gb|BC041577.1| Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B, mRNA (cDNA clone IMAGE:4636485) Length = 890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 cgcggctgccggagggcggcg 457 ||||||||||||||||||||| Sbjct: 135 cgcggctgccggagggcggcg 115
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 acgatgtcgacgccggtgccc 217 ||||||||||||||||||||| Sbjct: 3163954 acgatgtcgacgccggtgccc 3163974 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 280 cgcctccggcccacccccggcgcgc 304 |||| |||||||||||||||||||| Sbjct: 1617459 cgccgccggcccacccccggcgcgc 1617435 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 cggcgtcagcttcaccgtggccgag 363 ||||||||||||||||||| ||||| Sbjct: 707727 cggcgtcagcttcaccgtgcccgag 707751
>gb|AD000006.1|MSGY140 Mycobacterium tuberculosis sequence from clone y140 Length = 40806 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 gtggcggcctcgccgttggcg 511 ||||||||||||||||||||| Sbjct: 23159 gtggcggcctcgccgttggcg 23139
>ref|NM_144677.2| Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B (MGAT5B), transcript variant 1, mRNA Length = 4246 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 cgcggctgccggagggcggcg 457 ||||||||||||||||||||| Sbjct: 135 cgcggctgccggagggcggcg 115
>ref|NM_194749.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0013J21.8), mRNA Length = 522 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 246 cttctacccgctggccggccgcatccgg 273
>gb|AY547406.1| Paphiopedilum rothschildianum clone WT18 microsatellite sequence Length = 532 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccctccccgagctctctctc 114 |||||||||||||||||||| Sbjct: 494 ccctccccgagctctctctc 513
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 82396 ccttctaccccctcgccggccgcttccg 82369
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 44865 cttctacccgctggccggccgcatccgg 44892 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 ||||||||| || ||||||||||||||| Sbjct: 31642 cttctacccactggccggccgcctccgg 31669
>ref|XM_866758.1| PREDICTED: Bos taurus similar to Huntingtin (Huntingtons disease protein homolog) (HD protein) (LOC615059), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cctcctctccaacctccagg 235 |||||||||||||||||||| Sbjct: 1236 cctcctctccaacctccagg 1255
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cacgacgatgtcgacgccgg 212 |||||||||||||||||||| Sbjct: 2134259 cacgacgatgtcgacgccgg 2134240
>gb|AC102062.9| Mus musculus chromosome 19, clone RP23-217B9, complete sequence Length = 253774 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cccgctcgccggccgcctcc 286 |||||||||||||||||||| Sbjct: 173416 cccgctcgccggccgcctcc 173397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cgccgtggcggcctcgccgt 506 |||||||||||||||||||| Sbjct: 23446348 cgccgtggcggcctcgccgt 23446367
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 cgccgtggcggcctcgccgt 506 |||||||||||||||||||| Sbjct: 135909 cgccgtggcggcctcgccgt 135890
>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence Length = 187659 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 cccgctcgccggccgcctccggcc 290 ||||||||||||||||| |||||| Sbjct: 14464 cccgctcgccggccgccgccggcc 14487
>emb|AJ509173.1|PFR509173 Propionibacterium freudenreichii subsp. shermanii rpiB3 gene for ribose-5-phosphate isomerase 3, type strain CIP103027T Length = 483 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 gccgtggcggcctcgccgttggcg 511 ||||||||||||||||||| |||| Sbjct: 182 gccgtggcggcctcgccgtcggcg 159
>gb|AC124357.3| Mus musculus BAC clone RP24-490K11 from chromosome 19, complete sequence Length = 154460 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cccgctcgccggccgcctcc 286 |||||||||||||||||||| Sbjct: 34270 cccgctcgccggccgcctcc 34289
>gb|BC032447.1| Homo sapiens WWC family member 3, mRNA (cDNA clone IMAGE:5109476), partial cds Length = 3144 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 1411 gtgccctcctctccaacctc 1392
>gb|BC098455.1| Homo sapiens WWC family member 3, mRNA (cDNA clone IMAGE:4585512), with apparent retained intron Length = 3985 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 2249 gtgccctcctctccaacctc 2230
>gb|BC098424.1| Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha), mRNA (cDNA clone IMAGE:6341396), containing frame-shift errors Length = 2521 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ccgctggtgccgcggctgccggag 450 |||||||||||||||| ||||||| Sbjct: 79 ccgctggtgccgcggccgccggag 56
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tggtgccgcggctgccggag 450 |||||||||||||||||||| Sbjct: 2660002 tggtgccgcggctgccggag 2660021
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 2066725 cttctacccgctggccggccgcatccgg 2066752 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 ||||||||| || ||||||||||||||| Sbjct: 2053502 cttctacccactggccggccgcctccgg 2053529
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 ||||||||| || ||||||||||||||| Sbjct: 144231 cttctacccactggccggccgcctccgg 144258
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ccgctggtgccgcggctgccggag 450 ||||||||||||| |||||||||| Sbjct: 55438 ccgctggtgccgccgctgccggag 55415
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 acgagcacgacgatgtcgacgccg 211 ||||||||||||||| |||||||| Sbjct: 25533 acgagcacgacgatgccgacgccg 25556
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 acgatgtcgacgccggtgcc 216 |||||||||||||||||||| Sbjct: 65821 acgatgtcgacgccggtgcc 65840
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cgacggcgtcagcttcaccg 355 |||||||||||||||||||| Sbjct: 9389 cgacggcgtcagcttcaccg 9370
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cccgctcgccggccgcctcc 286 |||||||||||||||||||| Sbjct: 50799 cccgctcgccggccgcctcc 50818
>emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2 Length = 31317 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gctgcgccgtggcggcctcg 502 |||||||||||||||||||| Sbjct: 25785 gctgcgccgtggcggcctcg 25804
>emb|AJ414671.1|SCO414671 Streptomyces coelicolor plasmid 2 (SCP2*) Length = 7686 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 gctgcgccgtggcggcctcg 502 |||||||||||||||||||| Sbjct: 4893 gctgcgccgtggcggcctcg 4874
>emb|AJ006099.1|TAE6099 Triticum aestivum WPR4b gene Length = 604 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 cctgctgcgccgtggcggcc 499 |||||||||||||||||||| Sbjct: 129 cctgctgcgccgtggcggcc 110
>emb|AL669856.6| Mouse DNA sequence from clone RP23-46I13 on chromosome 11 Contains part of the Slit 3 gene for slit homolog 3 (Drosophila), a novel gene and a ribosomal protein L21 (Rpl21) pseudogene, complete sequence Length = 264752 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ttggctctgcaggccaccct 482 |||||||||||||||||||| Sbjct: 163524 ttggctctgcaggccaccct 163543
>gb|AC121345.12| Homo sapiens X BAC RP11-121I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109924 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 39569 gtgccctcctctccaacctc 39550
>emb|AL353937.1|HSM802642 Homo sapiens mRNA; cDNA DKFZp761A1124 (from clone DKFZp761A1124) Length = 5960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 1367 gtgccctcctctccaacctc 1348
>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence Length = 226170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccggccgcctccggcccacc 294 |||||||||||||||||||| Sbjct: 98631 ccggccgcctccggcccacc 98612
>gb|AE005978.1| Caulobacter crescentus CB15 section 304 of 359 of the complete genome Length = 11417 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 ccctgctgcgccgtggcggcctcg 502 |||||| ||||||||||||||||| Sbjct: 4717 ccctgcggcgccgtggcggcctcg 4740
>dbj|AK091936.1| Homo sapiens cDNA FLJ34617 fis, clone KIDNE2014325 Length = 2271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 553 gtgccctcctctccaacctc 534
>gb|AC007665.24| Mus musculus strain RIII Fibroblast cell line C127 chromosome 18 clone mgsriii-p1_3084, complete sequence Length = 85548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tgccctcctctccaacctcc 232 |||||||||||||||||||| Sbjct: 58354 tgccctcctctccaacctcc 58373
>ref|NM_015691.2| Homo sapiens WWC family member 3 (WWC3), mRNA Length = 6632 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 2059 gtgccctcctctccaacctc 2040
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cgacggcgtcagcttcaccgtggc 359 ||||||||||||| |||||||||| Sbjct: 731342 cgacggcgtcagcctcaccgtggc 731365
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctacccgctcgccggccgcctccg 287 ||||||| |||||||||||||||| Sbjct: 16018628 ctacccgatcgccggccgcctccg 16018605 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 gcgtgggcgtgggcggcggc 584 |||||||||||||||||||| Sbjct: 6773172 gcgtgggcgtgggcggcggc 6773153
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 2066725 cttctacccgctggccggccgcatccgg 2066752 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 ||||||||| || ||||||||||||||| Sbjct: 2053502 cttctacccactggccggccgcctccgg 2053529
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 cgtgggcgtgggcggcggcg 585 |||||||||||||||||||| Sbjct: 21019511 cgtgggcgtgggcggcggcg 21019492 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 487 cgccgtggcggcctcgccgttggcgtgaccgt 518 |||||||| ||||||||||||| |||| |||| Sbjct: 15910625 cgccgtgggggcctcgccgttgccgtgcccgt 15910656
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cgccgtggcggcctcgccgt 506 |||||||||||||||||||| Sbjct: 23439376 cgccgtggcggcctcgccgt 23439395
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cgccgtggcggcctcgccgt 506 |||||||||||||||||||| Sbjct: 129004 cgccgtggcggcctcgccgt 129023
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ttctacccgctcgccggccgcctc 285 ||||||||| |||||||||||||| Sbjct: 5272 ttctacccggtcgccggccgcctc 5249
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctacccgctcgccggccgcctccg 287 |||||| ||||||||||||||||| Sbjct: 101655 ctaccccctcgccggccgcctccg 101632
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 cgtgggcgtgggcggcggcg 585 |||||||||||||||||||| Sbjct: 111600 cgtgggcgtgggcggcggcg 111581
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 487 cgccgtggcggcctcgccgttggcgtgaccgt 518 |||||||| ||||||||||||| |||| |||| Sbjct: 73751 cgccgtgggggcctcgccgttgccgtgcccgt 73782
>dbj|AK024683.1| Homo sapiens cDNA: FLJ21030 fis, clone CAE07313 Length = 2421 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 686 gtgccctcctctccaacctc 667
>dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C07, full insert sequence Length = 1183 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttctacccgctcgccggccg 281 |||||||||||||||||||| Sbjct: 302 ttctacccgctcgccggccg 321
>dbj|AK104889.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C12, full insert sequence Length = 1440 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 210 ccttctaccccctcgccggccgcttccg 237
>dbj|AK099589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H09, full insert sequence Length = 1493 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 237 ccttctaccccctcgccggccgcttccg 264
>dbj|AK066866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088O08, full insert sequence Length = 1766 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 294 cttctacccgctggccggccgcatccgg 321
>dbj|AK060023.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H06, full insert sequence Length = 1442 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 ccttctacccgctcgccggccgcctccg 287 |||||||||| |||||||||||| |||| Sbjct: 233 ccttctaccccctcgccggccgcttccg 260
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 cgtgggcgtgggcggcggcg 585 |||||||||||||||||||| Sbjct: 40811 cgtgggcgtgggcggcggcg 40792
>gb|AC002364.1|AC002364 Homo sapiens Xp22 Cosmids U15E4, U115H5, U132E12, U115B9 (Lawrence Livermore human cosmid library) complete sequence Length = 120703 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 53310 gtgccctcctctccaacctc 53291
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 |||||||||||| ||||||||| ||||| Sbjct: 2066676 cttctacccgctggccggccgcatccgg 2066703 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cttctacccgctcgccggccgcctccgg 288 ||||||||| || ||||||||||||||| Sbjct: 2053453 cttctacccactggccggccgcctccgg 2053480
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctacccgctcgccggccgcctccg 287 ||||||| |||||||||||||||| Sbjct: 15971861 ctacccgatcgccggccgcctccg 15971838 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 gcgtgggcgtgggcggcggc 584 |||||||||||||||||||| Sbjct: 6773051 gcgtgggcgtgggcggcggc 6773032
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctacccgctcgccggccgcctccg 287 ||||||| |||||||||||||||| Sbjct: 86041 ctacccgatcgccggccgcctccg 86018
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 ctcgccgttggcgtgaccgt 518 |||||||||||||||||||| Sbjct: 5364665 ctcgccgttggcgtgaccgt 5364684
>emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427_C06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 88558 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 gcgtgggcgtgggcggcggc 584 |||||||||||||||||||| Sbjct: 45356 gcgtgggcgtgggcggcggc 45375
>dbj|AP001816.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:563D14, complete sequence Length = 123323 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 ccgctggtgccgcggctgccggag 450 |||||||||||||||| ||||||| Sbjct: 109753 ccgctggtgccgcggccgccggag 109776
>dbj|AB033106.1| Homo sapiens mRNA for KIAA1280 protein, partial cds Length = 3217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gtgccctcctctccaacctc 231 |||||||||||||||||||| Sbjct: 1499 gtgccctcctctccaacctc 1480
>dbj|D87924.1| Actinomadura hibisca polyketide synthase genes for pradimicin, complete cds Length = 8168 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 434 tgccgcggctgccggagggcggcgcggt 461 |||||| |||| |||||||||||||||| Sbjct: 5242 tgccgctgctgtcggagggcggcgcggt 5269 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,147,696 Number of Sequences: 3902068 Number of extensions: 4147696 Number of successful extensions: 99281 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95741 Number of HSP's gapped (non-prelim): 3528 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
