>DFG10_YEAST (P40526) Protein DFG10|
          Length = 253

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 39/137 (28%), Positives = 50/137 (36%), Gaps = 8/137 (5%)
 Frame = +1

Query: 187 SLLAAFSSRGKTVRPSSSSK--------AKFTVPQKYFLHFYVVGVAVTTSLLLAICFYA 342
           S L  F   GKT RP  +SK         KFTVP+ YF HFY +      + L  +  Y 
Sbjct: 32  SCLPEFLQYGKTYRPKENSKYSSILERIKKFTVPKAYFSHFYYL-----ATFLSLVTLYF 86

Query: 343 YMKMTPLLAEPSSYSTIASHFIGSNSFSFGSVLSRTMEHKYRVWRTVFVLLLMEIQVLRR 522
           Y K  P+                                   VW       ++    LRR
Sbjct: 87  YPKF-PI-----------------------------------VW-------IIFGHSLRR 103

Query: 523 LYETENVFHYSPTARMH 573
           LYET  V HY+  +RM+
Sbjct: 104 LYETLYVLHYTSNSRMN 120

>SPL10_ARATH (Q8S9L0) Squamosa promoter-binding-like protein 10|
          Length = 396

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 387 GVTRWLCQQRCHFHICIEAYCKQQACCHRHSHH 289
           G+ R  CQQ   FH   E   K+++C  R SHH
Sbjct: 211 GLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHH 243

>OCLN_RAT (Q6P6T5) Occludin|
          Length = 523

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +1

Query: 223 VRPSSSSKAKFTVPQKYFLHFYVVG-----VAVTTSLLLAICFYAYMKMTPLLAEPSSYS 387
           VRP  S  A    P+   LHFY        + + + L++ +C   +  +   LA   +Y 
Sbjct: 35  VRPMLSQPAYSFYPEDEILHFYKWTSPPGVIRILSMLVIVMCIAVFACVASTLAWDRAYG 94

Query: 388 TIASHFIGSNSFSFGS 435
           T    F GS ++ +GS
Sbjct: 95  T--GIFGGSMNYPYGS 108

>SPL11_ARATH (Q9FZK0) Squamosa promoter-binding-like protein 11|
          Length = 393

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 387 GVTRWLCQQRCHFHICIEAYCKQQACCHRHSHH 289
           G+ R  CQQ   FH   E   K+++C  R SHH
Sbjct: 210 GLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHH 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,697,688
Number of Sequences: 219361
Number of extensions: 1329585
Number of successful extensions: 4141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4130
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)