ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40g11 |
|---|---|
| Clone Library Name | barley_pub |
>GAG_BAEVM (P03341) Gag polyprotein [Contains: Inner coat protein p12; Core| protein p15; Core shell protein p30; Nucleoprotein p10] Length = 536 Score = 33.9 bits (76), Expect = 0.29 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 28/153 (18%) Frame = +2 Query: 89 LLVFVLPSHATATAPTGMLERETKQQILASIP-PHWQENPVL----------------FL 217 LL +P + T P +L E++Q +L P PH NP+L Sbjct: 110 LLALEVPKNRTLDPPKPVLPDESQQDLLFQDPLPHPPHNPLLEPPPYNSPSPPVLSPVSP 169 Query: 218 TSPSGKYAAHFMRSQTVPGAGGLGADFCYVEILHTTEP-----------GAEGRSVWESE 364 T+PS + + S T P + E+ T P G +G S W+S Sbjct: 170 TTPSAPTPSSLVSSSTPPSSPAPP------ELTPRTPPQTPRLRLRRAEGQDGPSTWQSS 223 Query: 365 CLAVSTVNTCAPVFSWKGLEVFDGSNSVWHTHD 463 + TVN + + ++++ W TH+ Sbjct: 224 LFPLRTVNRTIQYWPFSASDLYN-----WKTHN 251
>KPBB_DROME (Q9VLS1) Probable phosphorylase b kinase beta regulatory chain| (Phosphorylase kinase beta subunit) Length = 1093 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = -2 Query: 495 VLRKLLSTDSVSCVCHTELLPSNTSSPFHENTGAQVFTVLTAKHSDSHTLR 343 ++ L STDS+ C+C + N P E G V T LT + + +LR Sbjct: 710 IINALRSTDSIYCLCQLWGIILNREGPHFEVNGLNVNTALTQLYHRAGSLR 760
>CCMA2_SALPA (Q5PKT6) Cytochrome c biogenesis ATP-binding export protein ccmA 2| (EC 3.6.3.41) (Heme exporter protein A 2) Length = 205 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 376 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 218 HR L + H P ++ RL ENL G A A A+ GLA E V R+ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVARLSAGQQR 132 Query: 217 Q 215 + Sbjct: 133 R 133
>CCMA1_SALPA (Q5PI55) Cytochrome c biogenesis ATP-binding export protein ccmA 1| (EC 3.6.3.41) (Heme exporter protein A 1) Length = 205 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 376 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 218 HR L + H P ++ RL ENL G A A A+ GLA E V R+ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVARLSAGQQR 132 Query: 217 Q 215 + Sbjct: 133 R 133
>YBAY_ECOLI (P77717) Hypothetical lipoprotein ybaY precursor| Length = 190 Score = 30.0 bits (66), Expect = 4.3 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -2 Query: 411 HENTGAQVFTVLTAKHSDSHTLRPSAPGSVVWRIST*QKSAPRPPAPGTVWLRMKCA 241 H +G V L A S ++ AP + +T Q + +P GTVW+R K A Sbjct: 5 HMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVA 61
>A2MG_HUMAN (P01023) Alpha-2-macroglobulin precursor (Alpha-2-M)| Length = 1474 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +2 Query: 38 QTPAAAMELVSYITMCLLLVFVLPSHATATAPTGMLERETKQQ 166 Q P+A +E+ SY+ + L P+ T+ T +++ TKQQ Sbjct: 1200 QAPSAEVEMTSYVLLAYLTAQPAPTSEDLTSATNIVKWITKQQ 1242
>APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein APS (Adapter| protein with pleckstrin homology and Src homology 2 domains) Length = 621 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 13/54 (24%) Frame = -2 Query: 225 GDVRNNTGFSCQCGGMLAK-----ICCLVSRSSMP--------VGAVAVAWEGR 103 GD +TG SC GG LA C L++ + MP VGAV A GR Sbjct: 301 GDSEEDTGLSCARGGCLASRVTSCSCELLTEADMPRPPETMTAVGAVVTAPHGR 354
>FREM1_MOUSE (Q684R7) FRAS1-related extracellular matrix protein 1 precursor| (QBRICK protein) Length = 2191 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +2 Query: 368 LAVSTVNTCAPVFSWK-GLEVFDGSNSVWHTHDTESVDNNFLKTLQLVDEGDMR 526 +++ T +T AP SW GL + +G + + VDN+ + +QLV G ++ Sbjct: 410 ISIRTADTNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTIGGLQ 463
>HIS5_SALTY (P0A1R4) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 125 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALTI (P0A1R5) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 125 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALPA (Q5PDP6) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 125 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALCH (Q57MS0) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 125 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 (EC 3.6.1.-)| (ATP-dependent helicase CHD2) (CHD-2) Length = 1739 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 412 ERAGGVRREQLCVAHTRHGISRQQLPQNPAARGRG*HAHPR 534 E +G R + +HT H + Q+ P PA+ G H HPR Sbjct: 1582 EASGSSRDSLISQSHTSHNLHPQK-PHLPASHGPQMHGHPR 1621
>METK_BDEBA (Q6MPK2) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 387 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/48 (27%), Positives = 27/48 (56%) Frame = +2 Query: 95 VFVLPSHATATAPTGMLERETKQQILASIPPHWQENPVLFLTSPSGKY 238 V + HA + + + + E T++ I SIP +W ++ F +P+G++ Sbjct: 184 VVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRF 231
>ANPRA_HUMAN (P16066) Atrial natriuretic peptide receptor A precursor (ANP-A)| (ANPRA) (GC-A) (Guanylate cyclase) (EC 4.6.1.2) (NPR-A) (Atrial natriuretic peptide A-type receptor) Length = 1061 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Frame = +2 Query: 170 LASIPPHWQENPVLFL-------TSPSGKYAAHFMRSQTVPGAGGLG 289 LA++ W+ NP +FL +P G++ AH+ GA LG Sbjct: 99 LAAVDLKWEHNPAVFLGPGCVYAAAPVGRFTAHWRVPLLTAGAPALG 145
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)| Length = 1043 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = -2 Query: 477 STDSVSCVCHTELLPSNTSSPFHENTGAQVFTVLTAKHSDSHTLRPSAPGSVVWRIST*Q 298 + DS SC S+ SS + T V+ DS T P P + +S+ Sbjct: 239 TADSSSCSS------SSVSSSSYSGTATTSAAVVIVDEPDSTTTTPQTPPTTPEAMSSPG 292 Query: 297 KSAPRPPAPGT 265 KS+P PP T Sbjct: 293 KSSPSPPLLAT 303
>UL31_EBV (P03183) Protein BFLF2| Length = 318 Score = 29.3 bits (64), Expect = 7.3 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +1 Query: 409 VERAGGVRREQLCVAHTRHGISRQQLPQNPAARG 510 +ER G V R +C HTRHG+ R RG Sbjct: 58 MERVGSVARS-ICSRHTRHGVDRSHFSLRDFFRG 90
>APS_MOUSE (Q9JID9) SH2 and PH domain-containing adapter protein APS (Adapter| protein with pleckstrin homology and Src homology 2 domains) Length = 621 Score = 29.3 bits (64), Expect = 7.3 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 13/54 (24%) Frame = -2 Query: 225 GDVRNNTGFSCQCGGMLAK-----ICCLVSRSSMP--------VGAVAVAWEGR 103 GD +TG SC GG LA C L++ + MP VGAV A GR Sbjct: 301 GDSEEDTGLSCARGGCLASRVASCSCELLTDADMPRPPETTTAVGAVVTAPHGR 354
>HIS5_SHISS (Q3Z0G2) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIFL (Q83KJ5) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIDS (Q32EF2) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIBS (Q323I9) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECOLI (P60595) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECOL6 (P60596) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECO57 (P58237) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 235 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 125 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>ISPE_BRUSU (Q8G2D0) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 299 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +1 Query: 181 PAALAGEPRVVPDVAVRQVRGALHAQPDRAG 273 PAA++ P++ P +A+ + +GAL+AQ +G Sbjct: 230 PAAISLAPQIEPKLALLRAKGALYAQMSGSG 260
>ISPE_BRUAB (Q57EW9) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 299 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +1 Query: 181 PAALAGEPRVVPDVAVRQVRGALHAQPDRAG 273 PAA++ P++ P +A+ + +GAL+AQ +G Sbjct: 230 PAAISLAPQIEPKLALLRAKGALYAQMSGSG 260
>ISPE_BRUA2 (Q2YMB5) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 299 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +1 Query: 181 PAALAGEPRVVPDVAVRQVRGALHAQPDRAG 273 PAA++ P++ P +A+ + +GAL+AQ +G Sbjct: 230 PAAISLAPQIEPKLALLRAKGALYAQMSGSG 260
>K0310_HUMAN (O15027) Protein KIAA0310| Length = 2179 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +1 Query: 37 PNPSSSHGARLIHYHVPLAGVCPPFPRHSDGANR--HA*AGNQAANLGEHPAALAGEPRV 210 P PS H H PL V PP SDG + H +G+ AN + + PR+ Sbjct: 73 PTPSILHQGPGHEQHSPL--VAPPAALPSDGRDEVSHLQSGSHLANNSDPESTFRQNPRI 130 Query: 211 VPDVAVRQVR 240 V A ++R Sbjct: 131 VNHWASPELR 140
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 28.9 bits (63), Expect = 9.5 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -3 Query: 536 CRGCACHPRPRAAGF*GSCCRLIPCRVCATQS 441 C+ C P ++G SCC+ C+ C +QS Sbjct: 126 CQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQS 157
>CCMA_SALTI (P61377) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 376 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 218 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 217 Q 215 + Sbjct: 133 R 133
>CCMA2_SALTY (P61378) Cytochrome c biogenesis ATP-binding export protein ccmA 2| (EC 3.6.3.41) (Heme exporter protein A 2) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 376 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 218 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 217 Q 215 + Sbjct: 133 R 133
>CCMA1_SALTY (Q8ZKZ9) Cytochrome c biogenesis ATP-binding export protein ccmA 1| (EC 3.6.3.41) (Heme exporter protein A 1) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 376 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 218 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 217 Q 215 + Sbjct: 133 R 133
>METK_COXBU (Q83A78) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 393 Score = 28.9 bits (63), Expect = 9.5 Identities = 11/42 (26%), Positives = 21/42 (50%) Frame = +2 Query: 113 HATATAPTGMLERETKQQILASIPPHWQENPVLFLTSPSGKY 238 H+ + + E + I +PPHW + FL +P+G++ Sbjct: 191 HSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNPTGRF 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,958,285 Number of Sequences: 219361 Number of extensions: 1908611 Number of successful extensions: 6641 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6636 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
