ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 64 3e-10
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 58 2e-08
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 33 0.37
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 33 0.64
5PT1_STAES (Q8CT19) Phosphoenolpyruvate-protein phosphotransferas... 30 5.4
6PT1_STAEQ (Q5HQ85) Phosphoenolpyruvate-protein phosphotransferas... 30 5.4
7GLGB_BACCL (P30537) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 30 5.4
8PT1_STRBO (Q9WXK9) Phosphoenolpyruvate-protein phosphotransferas... 29 9.2

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +3

Query: 270 VPAMFVLGDSTLDVGNNNHLPGKDVPKANEPFYGIDFPGGARATGRFSNGYNIADFVAMH 449
           +PA+F  GDS  D GNNN+L  K   K N   YG+DFP G  ATGRFSNG   +D+++ +
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTK--LKCNYRPYGMDFPMGV-ATGRFSNGRVASDYISKY 179

Query: 450 LGFERSPLAYL--VLKSRNYLIPSALTRG 530
           LG +    AY+   L+  N L  S L  G
Sbjct: 180 LGVKEIVPAYVDKKLQQNNELQQSDLLTG 208



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 33/71 (46%), Positives = 44/71 (61%)
 Frame = +3

Query: 270 VPAMFVLGDSTLDVGNNNHLPGKDVPKANEPFYGIDFPGGARATGRFSNGYNIADFVAMH 449
           +PA+F  GDS  D GNNN+L  K   K+N   YG+DF     ATGRFSNG   +D++A +
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETK--IKSNYRPYGMDFKFRV-ATGRFSNGMVASDYLAKY 258

Query: 450 LGFERSPLAYL 482
           +G +    AYL
Sbjct: 259 MGVKEIVPAYL 269



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +3

Query: 273 PAMFVLGDSTLDVGNNNHLPGKDVPKANEPFYGIDFPGGARATGRFSNGYNIADFVAMHL 452
           PA+F  GDS  D G  +   G+  P     F+G          GR+ +G  + DF+A  L
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFG-------SPAGRYCDGRLVIDFIAESL 81

Query: 453 G 455
           G
Sbjct: 82  G 82



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +3

Query: 273 PAMFVLGDSTLDVGNNNHLPGKDVPKANEPFYGIDFPGGA----RATGRFSNGYNIADFV 440
           PA+F  GDS  D G      GK        FY ++ P G     R+TGR+S+G  I DF+
Sbjct: 33  PAIFNFGDSNSDTG------GKAAA-----FYPLNPPYGETFFHRSTGRYSDGRLIIDFI 81

Query: 441 A 443
           A
Sbjct: 82  A 82



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>PT1_STAES (Q8CT19) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 572

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 300 TLDVGNNNHLPGKDVPKANEPFYG 371
           TLD+G +  LP  D+PK   PF G
Sbjct: 335 TLDIGGDKELPYLDLPKEMNPFLG 358



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>PT1_STAEQ (Q5HQ85) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 572

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 300 TLDVGNNNHLPGKDVPKANEPFYG 371
           TLD+G +  LP  D+PK   PF G
Sbjct: 335 TLDIGGDKELPYLDLPKEMNPFLG 358



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>GLGB_BACCL (P30537) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 666

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 267 VVPAMFVLGDSTLDVGNNNHLPGKDVPKANEPFYG 371
           + P   VL     + G + H+ GK +P  +EPF+G
Sbjct: 565 LAPYREVLNSDAAEFGGSGHVNGKRLPAFSEPFHG 599



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>PT1_STRBO (Q9WXK9) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 577

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 300 TLDVGNNNHLPGKDVPKANEPFYG 371
           T+D+G +  LP  D+PK   PF G
Sbjct: 335 TMDIGGDKELPYLDLPKEMNPFLG 358


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,167,091
Number of Sequences: 219361
Number of extensions: 1236291
Number of successful extensions: 3524
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3519
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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