ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40g06 |
|---|---|
| Clone Library Name | barley_pub |
>PIR7B_ORYSA (Q43360) Putative esterase PIR7B (EC 3.1.-.-)| Length = 268 Score = 270 bits (689), Expect = 3e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +1 Query: 37 TSVRNHFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSR 216 +S + HF+LVHGLCHGAWCWY+VVAAL AAGHR TA+D+AASG H ARVDEV +FEEYSR Sbjct: 5 SSSKKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSR 64 Query: 217 PLLDAVATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXXXMPCIGKHMGVT 396 PLLDAVA A GERL+LVGHSHGGLS+ALA+ERFP K MPC+GKHMGV Sbjct: 65 PLLDAVAAAA-APGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVP 123 Query: 397 TEEFMRRTSSQGLLMDCEMLPINNNQGAGVAIKMGPDFLAHKYYQQSPPKDLALAK 564 TEEFMRRT+ +GLLMDCEM+ INN+QG+GVAI +GP FLA KYYQQSP +DLALAK Sbjct: 124 TEEFMRRTAPEGLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAK 179
>PIR7A_ORYSA (Q40708) Putative esterase PIR7A (EC 3.1.-.-)| Length = 263 Score = 207 bits (528), Expect = 1e-53 Identities = 105/170 (61%), Positives = 119/170 (70%) Frame = +1 Query: 52 HFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSRPLLDA 231 HFV VHGL HGAWCWY+VVAAL AAGHR TA+D+AA+G H AR DEV S EEYSRPLLDA Sbjct: 7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDA 66 Query: 232 VATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXXXMPCIGKHMGVTTEEFM 411 VA A GERL+LVGHS GGLSLALA+ERFP K MP GKHMG+T EEFM Sbjct: 67 VAAA--APGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFM 124 Query: 412 RRTSSQGLLMDCEMLPINNNQGAGVAIKMGPDFLAHKYYQQSPPKDLALA 561 RR MD + + +N NQ A+ +GP LA K Y +SPP+DL LA Sbjct: 125 RRIKPD-FFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLA 173
>PNAE_RAUSE (Q9SE93) Polyneuridine-aldehyde esterase precursor (EC 3.1.1.78)| (Polyneuridine aldehyde esterase) Length = 264 Score = 142 bits (358), Expect = 6e-34 Identities = 70/182 (38%), Positives = 111/182 (60%) Frame = +1 Query: 19 MESTQRTSVRNHFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNS 198 M S + HFVLVHG C GAW WYK+ LE+AGH+VTAVDL+A+G++ R+DE+++ Sbjct: 1 MHSAANAKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHT 60 Query: 199 FEEYSRPLLDAVATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXXXMPCIG 378 F +YS PL++ +A+ P E+++L+GHS GG+SL LA+E +P K MP Sbjct: 61 FRDYSEPLMEVMASIP--PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPN 118 Query: 379 KHMGVTTEEFMRRTSSQGLLMDCEMLPINNNQGAGVAIKMGPDFLAHKYYQQSPPKDLAL 558 + E++ + + +++D + N + G+++ +GP F+A K +Q +DL L Sbjct: 119 HSLTYPFEKYNEKCPAD-MMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLEL 177 Query: 559 AK 564 AK Sbjct: 178 AK 179
>HNL_MANES (P52705) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 112 bits (279), Expect = 9e-25 Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 1/175 (0%) Frame = +1 Query: 43 VRNHFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSRPL 222 V HFVL+H +CHGAW W+K+ ALE AGH+VTA+D+AASG+ +++++NSF+EYS PL Sbjct: 1 VTAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPL 60 Query: 223 LDAVATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXXXMPCIGKHMGVTTE 402 L + P+ GE++I+VG S GL++A+A +R+ K +P T E Sbjct: 61 LTFLEKLPQ--GEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVE 118 Query: 403 EFMRRTSSQGLLMDCEMLPINNNQGAGV-AIKMGPDFLAHKYYQQSPPKDLALAK 564 + + D E N G + +K+G L + + + LAK Sbjct: 119 KLLESFPD---WRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAK 170
>HNL_HEVBR (P52704) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 108 bits (270), Expect = 1e-23 Identities = 50/106 (47%), Positives = 72/106 (67%) Frame = +1 Query: 52 HFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSRPLLDA 231 HFVL+H +CHGAW W+K+ LEA GH+VTA+DLAASG+ +++E+ SF+EYS PLL Sbjct: 5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF 64 Query: 232 VATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXXXMP 369 + P GE++ILVG S GGL++A+A +++ K +P Sbjct: 65 LEALP--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLP 108
>DHMA_CAUCR (Q9A919) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 302 Score = 39.7 bits (91), Expect = 0.006 Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 1/131 (0%) Frame = +1 Query: 1 IHTTQEMESTQRTSVRNHFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSAR 180 IH E QR +L+HG A+ + KV+A L A GHRV A DL G Sbjct: 36 IHHVDEGPKDQRP-----ILLMHGEPSWAYLYRKVIAELVAKGHRVVAPDLVGFGRSDKP 90 Query: 181 VDEVNSFEEYSRPLLDAVATAPEGDGERLILVGHSHGGLSLALALERFPGKXXXXXXXXX 360 + Y R + A + D + ++L GGL + FP + Sbjct: 91 AKRTD--YTYERHVAWMSAWLEQNDLKDIVLFCQDWGGLIGLRLVAAFPERFSAVVVSNT 148 Query: 361 XMPC-IGKHMG 390 +P +GK G Sbjct: 149 GLPIGVGKSEG 159
>HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 555 Score = 39.7 bits (91), Expect = 0.006 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 11/99 (11%) Frame = +1 Query: 34 RTSVRNHFVLVHG-----LCHG---AW-CWYKVVAALEAAGHRVTAVDLAASGMHSARVD 186 + VR HFV + LCHG +W W + AL AG RV AVD+ G SA + Sbjct: 245 KPGVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPE 304 Query: 187 EVNSFEEYSRPLL--DAVATAPEGDGERLILVGHSHGGL 297 EEYS +L D V + + + +GH GG+ Sbjct: 305 ----IEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGV 339
>HYES_HUMAN (P34913) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 555 Score = 38.1 bits (87), Expect = 0.017 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 11/101 (10%) Frame = +1 Query: 28 TQRTSVRNHFVLVHG-----LCHG---AW-CWYKVVAALEAAGHRVTAVDLAASGMHSAR 180 T + VR HFV + LCHG +W W + AL AG+RV A+D+ G SA Sbjct: 243 TVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAP 302 Query: 181 VDEVNSFEEYSRPLL--DAVATAPEGDGERLILVGHSHGGL 297 + EEY +L + V + + + +GH GG+ Sbjct: 303 PE----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGM 339
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 36.2 bits (82), Expect = 0.066 Identities = 26/72 (36%), Positives = 37/72 (51%) Frame = -3 Query: 326 GNLSRASAKLSPPWLCPTRISRSPSPSGAVATASSSGREYSSNEFTSSTRAECMPDAARS 147 G L+ ASA +PP S SPS AVA ASSS SS +S++ + +A S Sbjct: 564 GPLAPASAGAAPP-------SASPSSQAAVAAASSSSASSSSASSSSASSSSASSSSASS 616 Query: 146 TAVTRWPAASRA 111 ++ + A+S A Sbjct: 617 SSASSSSASSSA 628
>E2F4_HUMAN (Q16254) Transcription factor E2F4 (E2F-4)| Length = 413 Score = 35.4 bits (80), Expect = 0.11 Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 13/136 (9%) Frame = -3 Query: 515 AKKSGPILIATPAPWLLLIGSISQSMSSPC--------DDVLRMNSSVVTPMCFP----M 372 A S P+ + P P LL + S P + R NS +TP P + Sbjct: 199 AWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEV 258 Query: 371 HGIXX-XXXXXXXTLPGNLSRASAKLSPPWLCPTRISRSPSPSGAVATASSSGREYSSNE 195 G+ PG S+ S +LS L PT + P S A+ +SSS SS+ Sbjct: 259 QGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSS 318 Query: 194 FTSSTRAECMPDAARS 147 S++ + P+ + S Sbjct: 319 SNSNSSSSSGPNPSTS 334
>HYES_MOUSE (P34914) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 35.0 bits (79), Expect = 0.15 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Frame = +1 Query: 28 TQRTSVRNHFVLVHG-----LCHG---AW-CWYKVVAALEAAGHRVTAVDLAASGMHSAR 180 T + +R HFV + LCHG +W W + AL AG RV A+D+ G S+ Sbjct: 241 TVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSP 300 Query: 181 VDEVNSFEEYSRPLL--DAVATAPEGDGERLILVGHSHGGL 297 + EEY+ LL + V + + + +GH G+ Sbjct: 301 PE----IEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGV 337
>HYES_RAT (P80299) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 34.7 bits (78), Expect = 0.19 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Frame = +1 Query: 28 TQRTSVRNHFVLVHG-----LCHG---AW-CWYKVVAALEAAGHRVTAVDLAASGMHSAR 180 T + +R HFV + LCHG +W W + AL AG RV A+D+ G S+ Sbjct: 241 TVKPGIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSP 300 Query: 181 VDEVNSFEEYSRPLL--DAVATAPEGDGERLILVGHSHGGL 297 + EEY+ LL + V + + + +GH G+ Sbjct: 301 PE----IEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGV 337
>PDAT_YEAST (P40345) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)| (PDAT) Length = 661 Score = 32.7 bits (73), Expect = 0.73 Identities = 20/70 (28%), Positives = 31/70 (44%) Frame = +1 Query: 82 GAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSRPLLDAVATAPEGDGE 261 G W W KV L G+ + AA A +D + + Y L + + + GE Sbjct: 258 GYWIWNKVFQNLGVIGYEPNKMTSAAYDWRLAYLD-LERRDRYFTKLKEQIELFHQLSGE 316 Query: 262 RLILVGHSHG 291 ++ L+GHS G Sbjct: 317 KVCLIGHSMG 326
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 32.7 bits (73), Expect = 0.73 Identities = 26/74 (35%), Positives = 34/74 (45%) Frame = -3 Query: 278 PTRISRSPSPSGAVATASSSGREYSSNEFTSSTRAECMPDAARSTAVTRWPAASRAATTL 99 PTR SP S +A +SSS S+ TSST + +T T P + TT Sbjct: 383 PTRPQLSPGTS--LAASSSSHWPSSTTSTTSSTTS--TTTTTTTTRRTTTPTTTTRRTTT 438 Query: 98 YQHHAPWQRPCTRT 57 + P+QRP T T Sbjct: 439 NKPTRPYQRPTTAT 452
>DHMA1_MYCTU (P64301) Haloalkane dehalogenase 1 (EC 3.8.1.5)| Length = 300 Score = 32.3 bits (72), Expect = 0.95 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 58 VLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYS 213 VL+HG ++ + ++ L AAGHRV A DL G R D+ E+Y+ Sbjct: 50 VLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFG----RSDKPTRIEDYT 97
>DHMA1_MYCBO (P64302) Haloalkane dehalogenase 1 (EC 3.8.1.5)| Length = 300 Score = 32.3 bits (72), Expect = 0.95 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 58 VLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYS 213 VL+HG ++ + ++ L AAGHRV A DL G R D+ E+Y+ Sbjct: 50 VLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFG----RSDKPTRIEDYT 97
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 32.0 bits (71), Expect = 1.2 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = -3 Query: 332 LPGNLSRASAKLSPPWLCPTRISRSPSPSGAVATASSS------GREYSSNEFTSSTRAE 171 L G L L P L P SR P A A + GRE +S+ SS Sbjct: 1879 LGGTLEGVYPTLMEPVLLPKETSRVARPERARVDAGHAFLTKPPGREPASSPSKSSEPRS 1938 Query: 170 CMPDAARSTAVTRWPAASRAATTLYQHHA 84 P ++ TA+ R PA + L HHA Sbjct: 1939 LAPPSSSHTAIARTPAKN-----LAPHHA 1962
>CLH0_CHEAL (Q9LE89) Chlorophyllase type 0 precursor (EC 3.1.1.14) (CaCLH0)| (Chlorophyll-chlorophyllido hydrolase 0) (Chlase 0) Length = 347 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = +1 Query: 145 VDLAASGMHSARVDEVNSFEEYSRPLLDAVATAPEGDGERLILVGHSHGGLS-LALAL 315 +D+AAS N Y + +L T EGD E+L + GHS GG S ALAL Sbjct: 124 IDMAAS--------VANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALAL 173
>LIP_VIBCH (P15493) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 312 Score = 31.2 bits (69), Expect = 2.1 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = +1 Query: 37 TSVRNHFVLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSR 216 T R VLVHGL + +A ++ ++ + ++ A+V NS E Sbjct: 32 TQTRYPIVLVHGLFG-----FDTLAGMDYFHGIPQSLTRDGAQVYVAQVSATNSSERRGE 86 Query: 217 PLLDAVATAPEGDGERLI-LVGHSHGG 294 LL V + G + + L+GHSHGG Sbjct: 87 QLLAQVESLLAVTGAKKVNLIGHSHGG 113
>LIP_PSEAE (P26876) Lactonizing lipase precursor (EC 3.1.1.3) (Triacylglycerol| lipase) Length = 311 Score = 31.2 bits (69), Expect = 2.1 Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 6/139 (4%) Frame = +1 Query: 19 MESTQRTSVRNHFVLVHGLCH-----GAWCWYKVVAALEAAGHRVTAVDLAASGMHSARV 183 ++++ T + VL HG+ G W+ + +AL G +V + V Sbjct: 24 IQASTYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTE----------V 73 Query: 184 DEVNSFEEYSRPLLDAVATAPEGDGE-RLILVGHSHGGLSLALALERFPGKXXXXXXXXX 360 ++++ E LL V G+ ++ L+GHSHGG ++ P Sbjct: 74 SQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVG- 132 Query: 361 XMPCIGKHMGVTTEEFMRR 417 H G T +F+R+ Sbjct: 133 -----APHKGSDTADFLRQ 146
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 31.2 bits (69), Expect = 2.1 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = -3 Query: 278 PTRISRSPSPSGAVATASSSGREYSSNEFTSS-TRAECMPDAARSTAVTRWPAASRAATT 102 P S + S S V T SSS E SS TSS T + P S++ T +A ++T Sbjct: 445 PVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSST 504 Query: 101 LYQHHAPWQRPCTRT 57 AP P + T Sbjct: 505 TESSSAPVPTPSSST 519 Score = 30.4 bits (67), Expect = 3.6 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = -3 Query: 332 LPGNLSRASAKLSPPWLCPTRISRSPSPSGAVATASSSGREYSSNEFTSS-TRAECMPDA 156 +P S + S P P+ S + S S V T SSS E SS TSS T + P Sbjct: 638 VPTPSSSTTESSSAPVPTPSS-STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVT 696 Query: 155 ARSTAVTRWPAASRAATTLYQHHAPWQRPCTRT 57 + +T + P + +++T AP P + T Sbjct: 697 SSTTESSSAPVPTPSSSTTESSSAPVPTPSSST 729 Score = 29.3 bits (64), Expect = 8.0 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = -3 Query: 278 PTRISRSPSPSGAVATASSSGREYSSNEFTSST----RAECMPDAARSTAVTRWPAASRA 111 P S + S S V T SSS E SS TSST A ++ +T + P + + Sbjct: 541 PVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPS 600 Query: 110 ATTLYQHHAPWQRPCTRT 57 ++T AP P + T Sbjct: 601 SSTTESSSAPAPTPSSST 618 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -3 Query: 278 PTRISRSPSPSGAVATASSSGREYSSNEFTSS-TRAECMPDAARSTAVTRWPAASRAATT 102 P S + S S V T SSS E SS TSS T + P + +T + P + +++T Sbjct: 343 PVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 402 Query: 101 LYQHHAP 81 AP Sbjct: 403 TESSSAP 409
>LIP_PSEU0 (P26877) Lactonizing lipase precursor (EC 3.1.1.3) (Triacylglycerol| lipase) Length = 311 Score = 30.4 bits (67), Expect = 3.6 Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 6/139 (4%) Frame = +1 Query: 19 MESTQRTSVRNHFVLVHGLCH-----GAWCWYKVVAALEAAGHRVTAVDLAASGMHSARV 183 ++++ T + VL HG+ G W+ + +AL G +V + V Sbjct: 24 IQASTYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTE----------V 73 Query: 184 DEVNSFEEYSRPLLDAVATAPEGDGE-RLILVGHSHGGLSLALALERFPGKXXXXXXXXX 360 ++++ E LL V G+ ++ L+GHSHGG ++ P Sbjct: 74 SQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLMPSATSVG- 132 Query: 361 XMPCIGKHMGVTTEEFMRR 417 H G T +F+R+ Sbjct: 133 -----APHKGSDTADFLRQ 146
>Y2734_MYCBO (P0A573) Hypothetical protein Mb2734| Length = 341 Score = 30.0 bits (66), Expect = 4.7 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +1 Query: 58 VLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSA-RVD-EVNSFEEYSRPLLDA 231 +L+HG+ + W V A L A V A DL G R D V ++ R LL Sbjct: 41 LLIHGIGDNSTTWNGVHAKL-AQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLLSV 99 Query: 232 VATAPEGDGERLILVGHSHGG 294 + D ER+ +VGHS GG Sbjct: 100 L------DIERVTIVGHSLGG 114
>Y2715_MYCTU (P0A572) Hypothetical protein Rv2715/MT2788| Length = 341 Score = 30.0 bits (66), Expect = 4.7 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +1 Query: 58 VLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSA-RVD-EVNSFEEYSRPLLDA 231 +L+HG+ + W V A L A V A DL G R D V ++ R LL Sbjct: 41 LLIHGIGDNSTTWNGVHAKL-AQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLLSV 99 Query: 232 VATAPEGDGERLILVGHSHGG 294 + D ER+ +VGHS GG Sbjct: 100 L------DIERVTIVGHSLGG 114
>PRXC_SYNY3 (Q55921) Putative non-heme chloroperoxidase (EC 1.11.1.10)| (Chloride peroxidase) Length = 276 Score = 30.0 bits (66), Expect = 4.7 Identities = 24/78 (30%), Positives = 32/78 (41%) Frame = +1 Query: 58 VLVHGLCHGAWCWYKVVAALEAAGHRVTAVDLAASGMHSARVDEVNSFEEYSRPLLDAVA 237 VL+HG W K V L AG+RV D G S + +S +Y D Sbjct: 28 VLIHGFPLNGDSWEKQVLVLLNAGYRVITYDRRGFGASS----QPSSGYDYDTFAADLHT 83 Query: 238 TAPEGDGERLILVGHSHG 291 + D + +LVG S G Sbjct: 84 LMTKLDLQNTVLVGFSMG 101
>SHC3_RAT (O70143) SHC transforming protein 3 (SH2 domain protein C3) (Src| homology 2 domain-containing transforming protein C3) (Neuronal Shc) (N-Shc) Length = 594 Score = 27.3 bits (59), Expect(2) = 6.0 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -3 Query: 272 RISRSPSPSGAVATASSSGREYSSNEFTSSTRAECM--PDAARSTAVTRWPAASRAAT 105 ++S S + SS+ RE + + S A + PD +T +R PAAS +AT Sbjct: 67 KVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGGSATPGSRAPAASMSAT 124 Score = 20.8 bits (42), Expect(2) = 6.0 Identities = 9/32 (28%), Positives = 15/32 (46%) Frame = -2 Query: 96 PTPRAVAEAVHQDEMVPHAGSLSALHFLCCVD 1 P PR A H + V +G + +L C++ Sbjct: 133 PLPRPPRGAPHASDQVLGSGVTYVVKYLGCIE 164
>RECQ4_HUMAN (O94761) ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ| protein-like 4) (RecQ4) (RTS) Length = 1208 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 429 RTTHGLRDAANQQ-QPRCWGCNQNGPRLLSTQVLPAKSTKGFGP 557 R++ L AA + +PRCWG + N S Q P +S +G P Sbjct: 60 RSSESLPAAAEEAPEPRCWGPHLNRAATKSPQPTPGRSRQGSVP 103
>IF2C_ARATH (Q9SHI1) Translation initiation factor IF-2, chloroplast precursor| Length = 1016 Score = 29.6 bits (65), Expect = 6.1 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%) Frame = -3 Query: 323 NLSRASAKLSPPWLCPTRISRSPSPSGA--VATASSSGREYSSNEFTSSTRAECMPDAAR 150 +LSR S K + WLC +S S + + A +A +++ SN F S + + Sbjct: 34 SLSRRSVKGTKKWLCRYSVSSSTTTTTADFIADQNNNSVSIDSNSFRGSKDGDDSEVVLK 93 Query: 149 ST-AVTRWPAASRAATTLYQHHAPWQR 72 T P +R L + APW + Sbjct: 94 QTPKPVLKPPVARVERGLGVNTAPWSK 120
>ZEP2_RAT (Q00900) Human immunodeficiency virus type I enhancer-binding protein| 2 homolog (DNA-binding protein AGIE-BP1) (Angiotensinogen gene-inducible enhancer-binding protein 1) (Myc intron-binding protein 1) Length = 2437 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/71 (23%), Positives = 30/71 (42%) Frame = -3 Query: 275 TRISRSPSPSGAVATASSSGREYSSNEFTSSTRAECMPDAARSTAVTRWPAASRAATTLY 96 T +SRSPS ++ +SS + +E T ++ + + PA S + + Sbjct: 958 TGLSRSPSQESNLSHSSSFSMSFDRDETVKLTAPPKQDESGKHSEFLTVPAGSYSLSVPG 1017 Query: 95 QHHAPWQRPCT 63 HH R C+ Sbjct: 1018 HHHQKEMRRCS 1028
>PEX14_MOUSE (Q9R0A0) Peroxisomal membrane protein PEX14 (Peroxin-14)| (Peroxisomal membrane anchor protein PEX14) (PTS1 receptor docking protein) Length = 376 Score = 29.3 bits (64), Expect = 8.0 Identities = 23/56 (41%), Positives = 26/56 (46%) Frame = -3 Query: 308 SAKLSPPWLCPTRISRSPSPSGAVATASSSGREYSSNEFTSSTRAECMPDAARSTA 141 SA P W P + S SPS AV SSS SNE TSS+ + STA Sbjct: 234 SAPKIPSWQIPVK-SSSPSSPAAVNHHSSSDISPVSNESTSSSPGKDSHSPEGSTA 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,074,689 Number of Sequences: 219361 Number of extensions: 1254057 Number of successful extensions: 5152 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5118 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
