ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40g06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190046.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 329 bits (166), Expect = 6e-87 Identities = 426/512 (83%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 28 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 87 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 88 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 147 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 148 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 207 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 208 gtggccgcggcggcggcgcc---cggcgagcggctggtcctcgtcgggcacagccacggc 264 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 265 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 324 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtcaccacagaggagttcatg 411 | ||||||||||||||||||| |||| ||||||||||||||| | || |||||||||||| Sbjct: 325 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtcccgaccgaggagttcatg 384 Query: 412 cgaagaacatcatcacaaggactactcatggactgcgagatgctgccaatcaacaacaac 471 ||||||| || | ||||| |||| ||||| ||||| ||| || | || ||||| | | Sbjct: 385 agaagaactgcacctgaaggattacttatggattgcgaaatggtggccataaacaatagc 444 Query: 472 caaggtgctggggttgcaatcaaaatgggcccagacttcttagcacacaagtattaccag 531 || || | || ||||||||||| |||| ||| |||||| ||||| || || |||||| Sbjct: 445 cagggctcaggagttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccag 504 Query: 532 caaagtccaccaaaggatttggccctggcgaa 563 ||||||||| || ||||| |||| |||||||| Sbjct: 505 caaagtccagcagaggatctggcactggcgaa 536
>emb|Z34270.1|OSPIR7BR O.sativa (cv. Nohrin) Pir7b mRNA Length = 948 Score = 329 bits (166), Expect = 6e-87 Identities = 426/512 (83%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 12 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 71 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 72 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 131 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 132 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 191 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 192 gtggccgcggcggcggcgcc---cggcgagcggctggtcctcgtcgggcacagccacggc 248 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 249 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 308 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtcaccacagaggagttcatg 411 | ||||||||||||||||||| |||| ||||||||||||||| | || |||||||||||| Sbjct: 309 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtcccgaccgaggagttcatg 368 Query: 412 cgaagaacatcatcacaaggactactcatggactgcgagatgctgccaatcaacaacaac 471 ||||||| || | ||||| |||| ||||| ||||| ||| || | || ||||| | | Sbjct: 369 agaagaactgcacctgaaggattacttatggattgcgaaatggtggccataaacaatagc 428 Query: 472 caaggtgctggggttgcaatcaaaatgggcccagacttcttagcacacaagtattaccag 531 || || | || ||||||||||| |||| ||| |||||| ||||| || || |||||| Sbjct: 429 cagggctcaggagttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccag 488 Query: 532 caaagtccaccaaaggatttggccctggcgaa 563 ||||||||| || ||||| |||| |||||||| Sbjct: 489 caaagtccagcagaggatctggcactggcgaa 520
>emb|Z34271.1|OSPIR7BAR O.sativa (var. IR36) PIR7a and PIR7b genes Length = 4397 Score = 285 bits (144), Expect = 8e-74 Identities = 293/342 (85%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 2746 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 2805 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 2806 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 2865 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 2866 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 2925 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 2926 gtggccgcggcggcggcg---cccggcgagcggctggtcctcgtcgggcacagccacggc 2982 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 2983 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 3042 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtc 393 | ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 3043 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtc 3084 Score = 135 bits (68), Expect = 2e-28 Identities = 235/291 (80%), Gaps = 6/291 (2%) Strand = Plus / Plus Query: 70 ggcctctgccacggcgcgtggtgttggtacaaggtggtcgccgccctcgaggccgcgggc 129 |||||| || ||||||||||||| ||||||| |||||||||||| || ||||| || Sbjct: 257 ggcctcggctacggcgcgtggtgctggtacagggtggtcgccgcgctgcgcgccgcaggg 316 Query: 130 caccgcgtcacggcggtcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgag 189 ||||||| | |||| ||||| | |||||| | ||| |||| ||||||||| ||||||| Sbjct: 317 caccgcgcgatggcgctcgacatggccgcggcgggcgcgcacccggcgcgcgccgacgag 376 Query: 190 gtgaactcgtttgaggagtactcacggccgctgctcgacgccgtggctacggcgccggag 249 ||| ||| | ||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 377 gtgggctccctcgaggagtactcgcgcccgctgctcgacgccgtggccgcggcggcg--- 433 Query: 250 ggtgacggcgagcggctgattctggtcgggcatagccacggcgggctcagcttggcgcta 309 ||||||||||||| | || |||||||| |||| |||||| |||||| | ||||| Sbjct: 434 ---cccggcgagcggctggtgctcgtcgggcacagcctcggcggcctcagcctcgcgctc 490 Query: 310 gccctggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 ||| ||||||||||||| | |||||||||||| ||||||||| ||||||| Sbjct: 491 gccatggagaggttcccggacaaggtcgccgccgccgtgttcctcgccgcc 541 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 484 gttgcaatcaaaatgggcccagacttcttagcacacaagtattaccagcaaagtcca 540 ||||||||||| |||| ||| |||||| ||||| || || ||||||||||||||| Sbjct: 3662 gttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccagcaaagtcca 3718
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 285 bits (144), Expect = 8e-74 Identities = 293/342 (85%), Gaps = 3/342 (0%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 40998293 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 40998234 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 40998233 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 40998174 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 40998173 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 40998114 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 40998113 gtggccgcggcggcggcg---cccggcgagcggctggtcctcgtcgggcacagccacggc 40998057 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 40998056 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 40997997 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtc 393 | ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 40997996 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtc 40997955 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 70 ggcctctgccacggcgcgtggtgttggtacaaggtggtcgccgccctcgaggccgcgggc 129 |||||| |||||||||||||||| ||||||| |||||||||||| || |||||||| Sbjct: 41000763 ggcctcggccacggcgcgtggtgctggtacagggtggtcgccgcgctgcgcgccgcgggg 41000704 Query: 130 caccgcgtcacggcggtcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgag 189 ||||||| |||||| ||||| | |||||| | ||| |||| ||||||||| ||||||| Sbjct: 41000703 caccgcgcgacggcgctcgacatggccgcggcgggcgcgcacccggcgcgcgccgacgag 41000644 Query: 190 gtgaactcgtttgaggagtactcacggccgctgctcgacgccgtggc 236 ||| ||| | ||||||||||| || |||||||||||||||||||| Sbjct: 41000643 gtgggctccctcgaggagtactcgcgcccgctgctcgacgccgtggc 41000597 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 40995985 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 40995926 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 40995925 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 40995866 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 40995865 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 40995806 Query: 232 gtggct 237 |||||| Sbjct: 40995805 gtggct 40995800 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 255 cggcgagcggctgattctggtcgggcatagccacggcgggctcagcttggcgctagccct 314 ||||||||||||| | || |||||||| |||| |||||| |||||| | ||||| ||| | Sbjct: 41000584 cggcgagcggctggtgctcgtcgggcacagcctcggcggcctcagcctcgcgctcgccat 41000525 Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 |||||||||||| | |||||||||||| ||||||||| ||||||| Sbjct: 41000524 ggagaggttcccggacaaggtcgccgccgccgtgttcctcgccgcc 41000479 Score = 73.8 bits (37), Expect = 5e-10 Identities = 192/244 (78%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 146 tcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgaggtgaactcgtttgagg 205 |||||||||| ||||||||| ||||| |||| ||| ||||||||||| |||| || |||| Sbjct: 40993119 tcgacctcgctgcgtccggcgtgcacccggcacgcatcgacgaggtgcactctttcgagg 40993060 Query: 206 agtactcacggccgctgctcgacgccgtggctacggcgccggagggtgacggcgagcggc 265 | || || || ||||| |||||| | |||||| ||| || | |||| ||| ||| Sbjct: 40993059 actagtcgcgaccgctcctcgacacagtggctgtggctcctgcgggt------gagaggc 40993006 Query: 266 tgattctggtcgggcatagccacggcgggctcagcttggcgctagccctggagaggttcc 325 |||| || || ||||| ||| |||||| || ||| | ||||| || |||||||||||| Sbjct: 40993005 tgatcctcgtagggcacagcttcggcggcctaagcatcgcgctcgcaatggagaggttcc 40992946 Query: 326 ccggcaaggtcgccgcggccgtgttcgccgccgccgcgatgccgtgcatcgggaagcaca 385 | | |||| |||||| ||||||||| |||||| | | ||||| ||| |||| ||||||| Sbjct: 40992945 cggacaagatcgccgtggccgtgtttgccgcctcgtccatgccatgcgtcggcaagcaca 40992886 Query: 386 tggg 389 |||| Sbjct: 40992885 tggg 40992882 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 ||||| |||||| | |||||||||||| |||||||||| ||||||| Sbjct: 21059495 ggagacgttcccggacaaggtcgccgccgccgtgttcgtcgccgcc 21059450 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 59 tcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggt 104 |||||| ||||||| |||||||||| |||||| ||||||||||| Sbjct: 21059751 tcctggcgcacggcgcgtgccacggcgggtggtgctggtacaaggt 21059706 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 330 caaggtcgccgcggccgtgttcgccgccgc 359 |||||||||||| |||||||||| |||||| Sbjct: 21053757 caaggtcgccgccgccgtgttcgtcgccgc 21053728 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 484 gttgcaatcaaaatgggcccagacttcttagcacacaagtattaccagcaaagtcca 540 ||||||||||| |||| ||| |||||| ||||| || || ||||||||||||||| Sbjct: 40997374 gttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccagcaaagtcca 40997318 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 121 gccgcgggccaccgcgtcacggcggtcgacctcgccgcgtc 161 |||||||||||||||||| ||| ||||||||||||||| Sbjct: 21053966 gccgcgggccaccgcgtccacgcgcccgacctcgccgcgtc 21053926 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgacctcgccgcgtccggca 166 |||||||||||||||||||| Sbjct: 4698676 cgacctcgccgcgtccggca 4698657
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 285 bits (144), Expect = 8e-74 Identities = 293/342 (85%), Gaps = 3/342 (0%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 35223 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 35164 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 35163 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 35104 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 35103 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 35044 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 35043 gtggccgcggcggcggcg---cccggcgagcggctggtcctcgtcgggcacagccacggc 34987 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 34986 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 34927 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtc 393 | ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 34926 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtc 34885 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 70 ggcctctgccacggcgcgtggtgttggtacaaggtggtcgccgccctcgaggccgcgggc 129 |||||| |||||||||||||||| ||||||| |||||||||||| || |||||||| Sbjct: 37693 ggcctcggccacggcgcgtggtgctggtacagggtggtcgccgcgctgcgcgccgcgggg 37634 Query: 130 caccgcgtcacggcggtcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgag 189 ||||||| |||||| ||||| | |||||| | ||| |||| ||||||||| ||||||| Sbjct: 37633 caccgcgcgacggcgctcgacatggccgcggcgggcgcgcacccggcgcgcgccgacgag 37574 Query: 190 gtgaactcgtttgaggagtactcacggccgctgctcgacgccgtggc 236 ||| ||| | ||||||||||| || |||||||||||||||||||| Sbjct: 37573 gtgggctccctcgaggagtactcgcgcccgctgctcgacgccgtggc 37527 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 32915 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 32856 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 32855 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 32796 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 32795 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 32736 Query: 232 gtggct 237 |||||| Sbjct: 32735 gtggct 32730 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 255 cggcgagcggctgattctggtcgggcatagccacggcgggctcagcttggcgctagccct 314 ||||||||||||| | || |||||||| |||| |||||| |||||| | ||||| ||| | Sbjct: 37514 cggcgagcggctggtgctcgtcgggcacagcctcggcggcctcagcctcgcgctcgccat 37455 Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 |||||||||||| | |||||||||||| ||||||||| ||||||| Sbjct: 37454 ggagaggttcccggacaaggtcgccgccgccgtgttcctcgccgcc 37409 Score = 73.8 bits (37), Expect = 5e-10 Identities = 192/244 (78%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 146 tcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgaggtgaactcgtttgagg 205 |||||||||| ||||||||| ||||| |||| ||| ||||||||||| |||| || |||| Sbjct: 30049 tcgacctcgctgcgtccggcgtgcacccggcacgcatcgacgaggtgcactctttcgagg 29990 Query: 206 agtactcacggccgctgctcgacgccgtggctacggcgccggagggtgacggcgagcggc 265 | || || || ||||| |||||| | |||||| ||| || | |||| ||| ||| Sbjct: 29989 actagtcgcgaccgctcctcgacacagtggctgtggctcctgcgggt------gagaggc 29936 Query: 266 tgattctggtcgggcatagccacggcgggctcagcttggcgctagccctggagaggttcc 325 |||| || || ||||| ||| |||||| || ||| | ||||| || |||||||||||| Sbjct: 29935 tgatcctcgtagggcacagcttcggcggcctaagcatcgcgctcgcaatggagaggttcc 29876 Query: 326 ccggcaaggtcgccgcggccgtgttcgccgccgccgcgatgccgtgcatcgggaagcaca 385 | | |||| |||||| ||||||||| |||||| | | ||||| ||| |||| ||||||| Sbjct: 29875 cggacaagatcgccgtggccgtgtttgccgcctcgtccatgccatgcgtcggcaagcaca 29816 Query: 386 tggg 389 |||| Sbjct: 29815 tggg 29812 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 484 gttgcaatcaaaatgggcccagacttcttagcacacaagtattaccagcaaagtcca 540 ||||||||||| |||| ||| |||||| ||||| || || ||||||||||||||| Sbjct: 34304 gttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccagcaaagtcca 34248
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 285 bits (144), Expect = 8e-74 Identities = 293/342 (85%), Gaps = 3/342 (0%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 126718 catttcatcctggtccacggcctctgccacggcgcgtggtgctggtacagggtggtcgcc 126659 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 || || |||||||| ||||||| |||||| ||||| | |||||||| ||| |||| Sbjct: 126658 gcgctgcgcgccgcggggcaccgcgcgacggcgctcgacatggccgcgtcgggcgcgcac 126599 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 |||||||||||||||||||| | | || ||||||||||| |||||||||||||||||| Sbjct: 126598 ccggcgcgcgtcgacgaggtgggcaccttcgaggagtactcgcggccgctgctcgacgcc 126539 Query: 232 gtggctacggcgccggagggtgacggcgagcggctgattctggtcgggcatagccacggc 291 ||||| ||||| ||| | ||||||||||||| | || |||||||| ||||||||| Sbjct: 126538 gtggccgcggcggcggcg---cccggcgagcggctggtcctcgtcgggcacagccacggc 126482 Query: 292 gggctcagcttggcgctagccctggagaggttccccggcaaggtcgccgcggccgtgttc 351 || |||||| | ||||| ||| ||||||||||||| | |||||||||||| ||||||||| Sbjct: 126481 ggcctcagcgtcgcgctcgccatggagaggttcccggacaaggtcgccgccgccgtgttc 126422 Query: 352 gccgccgccgcgatgccgtgcatcgggaagcacatgggcgtc 393 | ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 126421 gtcgccgccgcgatgccgtgcgtcggcaagcacatgggcgtc 126380 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 70 ggcctctgccacggcgcgtggtgttggtacaaggtggtcgccgccctcgaggccgcgggc 129 |||||| |||||||||||||||| ||||||| |||||||||||| || |||||||| Sbjct: 129188 ggcctcggccacggcgcgtggtgctggtacagggtggtcgccgcgctgcgcgccgcgggg 129129 Query: 130 caccgcgtcacggcggtcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgag 189 ||||||| |||||| ||||| | |||||| | ||| |||| ||||||||| ||||||| Sbjct: 129128 caccgcgcgacggcgctcgacatggccgcggcgggcgcgcacccggcgcgcgccgacgag 129069 Query: 190 gtgaactcgtttgaggagtactcacggccgctgctcgacgccgtggc 236 ||| ||| | ||||||||||| || |||||||||||||||||||| Sbjct: 129068 gtgggctccctcgaggagtactcgcgcccgctgctcgacgccgtggc 129022 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 124410 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 124351 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 124350 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 124291 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 124290 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 124231 Query: 232 gtggct 237 |||||| Sbjct: 124230 gtggct 124225 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 255 cggcgagcggctgattctggtcgggcatagccacggcgggctcagcttggcgctagccct 314 ||||||||||||| | || |||||||| |||| |||||| |||||| | ||||| ||| | Sbjct: 129009 cggcgagcggctggtgctcgtcgggcacagcctcggcggcctcagcctcgcgctcgccat 128950 Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 |||||||||||| | |||||||||||| ||||||||| ||||||| Sbjct: 128949 ggagaggttcccggacaaggtcgccgccgccgtgttcctcgccgcc 128904 Score = 73.8 bits (37), Expect = 5e-10 Identities = 192/244 (78%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 146 tcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgaggtgaactcgtttgagg 205 |||||||||| ||||||||| ||||| |||| ||| ||||||||||| |||| || |||| Sbjct: 121544 tcgacctcgctgcgtccggcgtgcacccggcacgcatcgacgaggtgcactctttcgagg 121485 Query: 206 agtactcacggccgctgctcgacgccgtggctacggcgccggagggtgacggcgagcggc 265 | || || || ||||| |||||| | |||||| ||| || | |||| ||| ||| Sbjct: 121484 actagtcgcgaccgctcctcgacacagtggctgtggctcctgcgggt------gagaggc 121431 Query: 266 tgattctggtcgggcatagccacggcgggctcagcttggcgctagccctggagaggttcc 325 |||| || || ||||| ||| |||||| || ||| | ||||| || |||||||||||| Sbjct: 121430 tgatcctcgtagggcacagcttcggcggcctaagcatcgcgctcgcaatggagaggttcc 121371 Query: 326 ccggcaaggtcgccgcggccgtgttcgccgccgccgcgatgccgtgcatcgggaagcaca 385 | | |||| |||||| ||||||||| |||||| | | ||||| ||| |||| ||||||| Sbjct: 121370 cggacaagatcgccgtggccgtgtttgccgcctcgtccatgccatgcgtcggcaagcaca 121311 Query: 386 tggg 389 |||| Sbjct: 121310 tggg 121307 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 484 gttgcaatcaaaatgggcccagacttcttagcacacaagtattaccagcaaagtcca 540 ||||||||||| |||| ||| |||||| ||||| || || ||||||||||||||| Sbjct: 125799 gttgcaatcaatttgggaccaaccttcttggcacaaaaatactaccagcaaagtcca 125743
>ref|NM_190047.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 70 ggcctctgccacggcgcgtggtgttggtacaaggtggtcgccgccctcgaggccgcgggc 129 |||||| |||||||||||||||| ||||||| |||||||||||| || |||||||| Sbjct: 37 ggcctcggccacggcgcgtggtgctggtacagggtggtcgccgcgctgcgcgccgcgggg 96 Query: 130 caccgcgtcacggcggtcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgag 189 ||||||| |||||| ||||| | |||||| | ||| |||| ||||||||| ||||||| Sbjct: 97 caccgcgcgacggcgctcgacatggccgcggcgggcgcgcacccggcgcgcgccgacgag 156 Query: 190 gtgaactcgtttgaggagtactcacggccgctgctcgacgccgtggc 236 ||| ||| | ||||||||||| || |||||||||||||||||||| Sbjct: 157 gtgggctccctcgaggagtactcgcgcccgctgctcgacgccgtggc 203 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 255 cggcgagcggctgattctggtcgggcatagccacggcgggctcagcttggcgctagccct 314 ||||||||||||| | || |||||||| |||| |||||| |||||| | ||||| ||| | Sbjct: 216 cggcgagcggctggtgctcgtcgggcacagcctcggcggcctcagcctcgcgctcgccat 275 Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 |||||||||||| | |||||||||||| ||||||||| ||||||| Sbjct: 276 ggagaggttcccggacaaggtcgccgccgccgtgttcctcgccgcc 321
>ref|NM_190045.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 28 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 87 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 88 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 147 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 148 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 207 Query: 232 gtggct 237 |||||| Sbjct: 208 gtggct 213
>dbj|AK099792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E21, full insert sequence Length = 4332 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 4187 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 4128 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 4127 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 4068 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 4067 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 4008 Query: 232 gtggct 237 |||||| Sbjct: 4007 gtggct 4002 Score = 73.8 bits (37), Expect = 5e-10 Identities = 192/244 (78%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 146 tcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgaggtgaactcgtttgagg 205 |||||||||| ||||||||| ||||| |||| ||| ||||||||||| |||| || |||| Sbjct: 1319 tcgacctcgctgcgtccggcgtgcacccggcacgcatcgacgaggtgcactctttcgagg 1260 Query: 206 agtactcacggccgctgctcgacgccgtggctacggcgccggagggtgacggcgagcggc 265 | || || || ||||| |||||| | |||||| ||| || | |||| ||| ||| Sbjct: 1259 actagtcgcgaccgctcctcgacacagtggctgtggctcctgcgggt------gagaggc 1206 Query: 266 tgattctggtcgggcatagccacggcgggctcagcttggcgctagccctggagaggttcc 325 |||| || || ||||| ||| |||||| || ||| | ||||| || |||||||||||| Sbjct: 1205 tgatcctcgtagggcacagcttcggcggcctaagcatcgcgctcgcaatggagaggttcc 1146 Query: 326 ccggcaaggtcgccgcggccgtgttcgccgccgccgcgatgccgtgcatcgggaagcaca 385 | | |||| |||||| ||||||||| |||||| | | ||||| ||| |||| ||||||| Sbjct: 1145 cggacaagatcgccgtggccgtgtttgccgcctcgtccatgccatgcgtcggcaagcaca 1086 Query: 386 tggg 389 |||| Sbjct: 1085 tggg 1082
>dbj|AK073211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014N13, full insert sequence Length = 2411 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Minus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 1752 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 1693 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 1692 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 1633 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 1632 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 1573 Query: 232 gtggct 237 |||||| Sbjct: 1572 gtggct 1567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 167/212 (78%), Gaps = 6/212 (2%) Strand = Plus / Minus Query: 146 tcgacctcgccgcgtccggcatgcactcggcgcgcgtcgacgaggtgaactcgtttgagg 205 |||||||||| ||||||||| ||||| |||| ||| ||||||||||| |||| || |||| Sbjct: 803 tcgacctcgctgcgtccggcgtgcacccggcacgcatcgacgaggtgcactctttcgagg 744 Query: 206 agtactcacggccgctgctcgacgccgtggctacggcgccggagggtgacggcgagcggc 265 | || || || ||||| |||||| | |||||| ||| || | |||| ||| ||| Sbjct: 743 actagtcgcgaccgctcctcgacacagtggctgtggctcctgcgggt------gagaggc 690 Query: 266 tgattctggtcgggcatagccacggcgggctcagcttggcgctagccctggagaggttcc 325 |||| || || ||||| ||| |||||| || ||| | ||||| || |||||||||||| Sbjct: 689 tgatcctcgtagggcacagcttcggcggcctaagcatcgcgctcgcaatggagaggttcc 630 Query: 326 ccggcaaggtcgccgcggccgtgttcgccgcc 357 | | |||| |||||| ||||||||| |||||| Sbjct: 629 cggacaagatcgccgtggccgtgtttgccgcc 598
>dbj|AK072603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131L10, full insert sequence Length = 943 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 52 catttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcgcc 111 |||||| |||| || || |||||||||||||| || ||||| ||||||||||||||| || Sbjct: 108 catttcatccttgtccatggcctctgccacggagcatggtgctggtacaaggtggtcacc 167 Query: 112 gccctcgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatgcac 171 ||| ||| ||| |||||||| |||||| |||||||||||||||||||| | ||| Sbjct: 168 atgctccgctccgaggggcaccgcgtgacggcgctcgacctcgccgcgtccggcgtccac 227 Query: 172 tcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgacgcc 231 | || || || ||||||||| |||| || ||||||||||| | |||||| ||||| || Sbjct: 228 ccagcacgggttgacgaggtgcactccttcgaggagtactcgcagccgctcctcgatgca 287 Query: 232 gtggct 237 |||||| Sbjct: 288 gtggct 293
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 91.7 bits (46), Expect = 2e-15 Identities = 150/182 (82%), Gaps = 2/182 (1%) Strand = Plus / Minus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||||| ||||||||||| || ||||||||||||||||| |||||||||| | || Sbjct: 59833 accacttcgtgctggtgcacgggctgtgccacggcgcgtggtgctggtacaaggccgccg 59774 Query: 110 ccgccctcgaggc-cgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatg 168 | || || | | | |||||| ||||||| ||||||| ||||| | ||||| |||| | Sbjct: 59773 cggcgct-gcgccgcgcggggcaccgcgccacggcgctcgacatggccgccagcggcgcg 59715 Query: 169 cactcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgac 228 ||| |||||||||||||||||||| | |||| ||||| ||||| || |||||||||||| Sbjct: 59714 cacccggcgcgcgtcgacgaggtgcgcacgttcgaggactactcccgcccgctgctcgac 59655 Query: 229 gc 230 || Sbjct: 59654 gc 59653 Score = 75.8 bits (38), Expect = 1e-10 Identities = 145/178 (81%), Gaps = 2/178 (1%) Strand = Plus / Minus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| ||| | | Sbjct: 75428 accacttcgtgctggtgcacgggctgtgccacggcgcgtggtgctggtacagggtcgcca 75369 Query: 110 ccgccct-cgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatg 168 | || || || | |||||||||||||||||||||| ||||| | | ||| ||||| | Sbjct: 75368 cggcgctgcgccg-cgcgggccaccgcgtcacggcgctcgacatggacgccgccggcgcg 75310 Query: 169 cactcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcg 226 | |||||||||||||||||||| | |||| ||||| ||||| || |||||||||| Sbjct: 75309 agcccggcgcgcgtcgacgaggtgcgcacgttcgaggactactcccgcccgctgctcg 75252
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 2e-15 Identities = 150/182 (82%), Gaps = 2/182 (1%) Strand = Plus / Minus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||||| ||||||||||| || ||||||||||||||||| |||||||||| | || Sbjct: 17683075 accacttcgtgctggtgcacgggctgtgccacggcgcgtggtgctggtacaaggccgccg 17683016 Query: 110 ccgccctcgaggc-cgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatg 168 | || || | | | |||||| ||||||| ||||||| ||||| | ||||| |||| | Sbjct: 17683015 cggcgct-gcgccgcgcggggcaccgcgccacggcgctcgacatggccgccagcggcgcg 17682957 Query: 169 cactcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgac 228 ||| |||||||||||||||||||| | |||| ||||| ||||| || |||||||||||| Sbjct: 17682956 cacccggcgcgcgtcgacgaggtgcgcacgttcgaggactactcccgcccgctgctcgac 17682897 Query: 229 gc 230 || Sbjct: 17682896 gc 17682895 Score = 75.8 bits (38), Expect = 1e-10 Identities = 145/178 (81%), Gaps = 2/178 (1%) Strand = Plus / Minus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| ||| | | Sbjct: 17698670 accacttcgtgctggtgcacgggctgtgccacggcgcgtggtgctggtacagggtcgcca 17698611 Query: 110 ccgccct-cgaggccgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatg 168 | || || || | |||||||||||||||||||||| ||||| | | ||| ||||| | Sbjct: 17698610 cggcgctgcgccg-cgcgggccaccgcgtcacggcgctcgacatggacgccgccggcgcg 17698552 Query: 169 cactcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcg 226 | |||||||||||||||||||| | |||| ||||| ||||| || |||||||||| Sbjct: 17698551 agcccggcgcgcgtcgacgaggtgcgcacgttcgaggactactcccgcccgctgctcg 17698494
>dbj|AK108862.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-B10, full insert sequence Length = 1079 Score = 91.7 bits (46), Expect = 2e-15 Identities = 150/182 (82%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||||| ||||||||||| || ||||||||||||||||| |||||||||| | || Sbjct: 102 accacttcgtgctggtgcacgggctgtgccacggcgcgtggtgctggtacaaggccgccg 161 Query: 110 ccgccctcgaggc-cgcgggccaccgcgtcacggcggtcgacctcgccgcgtccggcatg 168 | || || | | | |||||| ||||||| ||||||| ||||| | ||||| |||| | Sbjct: 162 cggcgct-gcgccgcgcggggcaccgcgccacggcgctcgacatggccgccagcggcgcg 220 Query: 169 cactcggcgcgcgtcgacgaggtgaactcgtttgaggagtactcacggccgctgctcgac 228 ||| |||||||||||||||||||| | |||| ||||| ||||| || |||||||||||| Sbjct: 221 cacccggcgcgcgtcgacgaggtgcgcacgttcgaggactactcccgcccgctgctcgac 280 Query: 229 gc 230 || Sbjct: 281 gc 282
>gb|AC135121.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0089M05, complete sequence Length = 131308 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||| |||||||||||||| ||||||||||||||||||| ||||||| |||| | Sbjct: 44893 accacttcatcctggtgcacggcgtctgccacggcgcgtggtgctggtacagggtgacca 44952 Query: 110 ccgccctcgaggccgcgggccaccgcgtcacggcggtcgac 150 |||| ||| |||| |||||||||||||| ||| ||||| Sbjct: 44953 ccgcgctctcctccgccggccaccgcgtcaccgcgctcgac 44993
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||| |||||||||||||| ||||||||||||||||||| ||||||| |||| | Sbjct: 16877147 accacttcatcctggtgcacggcgtctgccacggcgcgtggtgctggtacagggtgacca 16877206 Query: 110 ccgccctcgaggccgcgggccaccgcgtcacggcggtcgac 150 |||| ||| |||| |||||||||||||| ||| ||||| Sbjct: 16877207 ccgcgctctcctccgccggccaccgcgtcaccgcgctcgac 16877247
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 50 accatttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtggtcg 109 |||| ||| |||||||||||||| ||||||||||||||||||| ||||||| |||| | Sbjct: 16970918 accacttcatcctggtgcacggcgtctgccacggcgcgtggtgctggtacagggtgacca 16970977 Query: 110 ccgccctcgaggccgcgggccaccgcgtcacggcggtcgac 150 |||| ||| |||| |||||||||||||| ||| ||||| Sbjct: 16970978 ccgcgctctcctccgccggccaccgcgtcaccgcgctcgac 16971018
>gb|AY110883.1| Zea mays CL14379_1 mRNA sequence Length = 886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 55 ttcgtcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggtg 105 ||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 882 ttcgtgctagtgcacggcacctgccacggcgcgtggtgctggtacaaggtg 832
>ref|NM_119878.2| Arabidopsis thaliana catalytic/ hydrolase, acting on ester bonds AT4G37150 mRNA, complete cds Length = 928 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 80 ctgccacggtgcgtggtgttggtacaaggtg 110
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 73656 ctgccacggtgcgtggtgttggtacaaggtg 73686 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 74986 tgccacggcgcatggtgctggtacaaggt 75014
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 181578 ctgccacggtgcgtggtgttggtacaaggtg 181548 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 180248 tgccacggcgcatggtgctggtacaaggt 180220
>gb|BT006227.1| Arabidopsis thaliana At4g37150 gene, complete cds Length = 771 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 30 ctgccacggtgcgtggtgttggtacaaggtg 60
>emb|BX829016.1|CNS0A3E2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 849 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 68 ctgccacggtgcgtggtgttggtacaaggtg 98
>dbj|AK117107.1| Arabidopsis thaliana At4g37150 mRNA for putative ap2 hydroxynitrile lyase, complete cds, clone: RAFL16-64-I21 Length = 928 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 75 ctgccacggcgcgtggtgttggtacaaggtg 105 ||||||||| ||||||||||||||||||||| Sbjct: 80 ctgccacggtgcgtggtgttggtacaaggtg 110
>ref|NM_127922.2| Arabidopsis thaliana catalytic/ hydrolase AT2G23580 mRNA, complete cds Length = 1109 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 ||||||||||| |||||||||||||||||| Sbjct: 46 tgccacggcgcttggtgttggtacaaggtg 75
>ref|NM_193470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 861 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 ||||| |||||| | |||||||||||| |||||||||| ||||||| Sbjct: 297 ggagacgttcccggacaaggtcgccgccgccgtgttcgtcgccgcc 342 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 59 tcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggt 104 |||||| ||||||| |||||||||| |||||| ||||||||||| Sbjct: 41 tcctggcgcacggcgcgtgccacggcgggtggtgctggtacaaggt 86
>gb|BT010429.1| Arabidopsis thaliana At2g23580 mRNA, complete cds Length = 792 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 ||||||||||| |||||||||||||||||| Sbjct: 46 tgccacggcgcttggtgttggtacaaggtg 75
>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete sequence Length = 123360 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 ||||||||||| |||||||||||||||||| Sbjct: 85630 tgccacggcgcttggtgttggtacaaggtg 85601 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 |||| |||||||||||| |||||||||||| Sbjct: 87248 tgcctcggcgcgtggtgctggtacaaggtg 87219 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 |||||||| |||||| |||||||||||||| Sbjct: 83999 tgccacggggcgtggagttggtacaaggtg 83970 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||||||||| ||||||||||| Sbjct: 100565 tgccatggcgcgtggtgctggtacaaggt 100537 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 94958 tgccacggcgcatggtgctggtacaaggt 94930 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 74 tctgccacggcgcgtggtgttggtacaaggtg 105 ||||||| || || |||||||||||||||||| Sbjct: 81604 tctgccatggagcttggtgttggtacaaggtg 81573
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 ||||| |||||| | |||||||||||| |||||||||| ||||||| Sbjct: 27040 ggagacgttcccggacaaggtcgccgccgccgtgttcgtcgccgcc 26995 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 59 tcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggt 104 |||||| ||||||| |||||||||| |||||| ||||||||||| Sbjct: 27296 tcctggcgcacggcgcgtgccacggcgggtggtgctggtacaaggt 27251 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 330 caaggtcgccgcggccgtgttcgccgccgc 359 |||||||||||| |||||||||| |||||| Sbjct: 21302 caaggtcgccgccgccgtgttcgtcgccgc 21273 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 121 gccgcgggccaccgcgtcacggcggtcgacctcgccgcgtc 161 |||||||||||||||||| ||| ||||||||||||||| Sbjct: 21511 gccgcgggccaccgcgtccacgcgcccgacctcgccgcgtc 21471
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 315 ggagaggttccccggcaaggtcgccgcggccgtgttcgccgccgcc 360 ||||| |||||| | |||||||||||| |||||||||| ||||||| Sbjct: 122697 ggagacgttcccggacaaggtcgccgccgccgtgttcgtcgccgcc 122652 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 59 tcctggtgcacggcctctgccacggcgcgtggtgttggtacaaggt 104 |||||| ||||||| |||||||||| |||||| ||||||||||| Sbjct: 122953 tcctggcgcacggcgcgtgccacggcgggtggtgctggtacaaggt 122908 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 330 caaggtcgccgcggccgtgttcgccgccgc 359 |||||||||||| |||||||||| |||||| Sbjct: 116959 caaggtcgccgccgccgtgttcgtcgccgc 116930 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 121 gccgcgggccaccgcgtcacggcggtcgacctcgccgcgtc 161 |||||||||||||||||| ||| ||||||||||||||| Sbjct: 117168 gccgcgggccaccgcgtccacgcgcccgacctcgccgcgtc 117128
>dbj|AK175772.1| Arabidopsis thaliana mRNA for putative acetone-cyanohydrin lyase, complete cds, clone: RAFL22-34-J16 Length = 902 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 ||||||||||| |||||||||||||||||| Sbjct: 63 tgccacggcgcttggtgttggtacaaggtg 92
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 341 cggccgtgttcgccgccgccgcgat 365 ||||||||||||||||||||||||| Sbjct: 2355518 cggccgtgttcgccgccgccgcgat 2355494
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 gccgtgttcgccgccgccgcgat 365 ||||||||||||||||||||||| Sbjct: 534469 gccgtgttcgccgccgccgcgat 534447 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gagggtgacggcgagcggctg 267 ||||||||||||||||||||| Sbjct: 2290183 gagggtgacggcgagcggctg 2290163
>ref|NM_127923.1| Arabidopsis thaliana catalytic/ hydrolase AT2G23590 mRNA, complete cds Length = 834 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggtg 105 |||| |||||||||||| |||||||||||| Sbjct: 118 tgcctcggcgcgtggtgctggtacaaggtg 147
>ref|NM_193468.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 330 caaggtcgccgcggccgtgttcgccgccgc 359 |||||||||||| |||||||||| |||||| Sbjct: 327 caaggtcgccgccgccgtgttcgtcgccgc 356 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 121 gccgcgggccaccgcgtcacggcggtcgacctcgccgcgtc 161 |||||||||||||||||| ||| ||||||||||||||| Sbjct: 118 gccgcgggccaccgcgtccacgcgcccgacctcgccgcgtc 158
>ref|NM_119877.1| Arabidopsis thaliana catalytic/ hydrolase, acting on ester bonds AT4G37140 mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 31 tgccacggcgcatggtgctggtacaaggt 59
>ref|NM_127926.2| Arabidopsis thaliana catalytic/ hydrolase, acting on ester bonds AT2G23620 mRNA, complete cds Length = 918 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||||||||| ||||||||||| Sbjct: 92 tgccatggcgcgtggtgctggtacaaggt 120
>ref|NM_127924.2| Arabidopsis thaliana catalytic/ hydrolase AT2G23600 mRNA, complete cds Length = 950 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 81 tgccacggcgcatggtgctggtacaaggt 109
>ref|XM_467281.1| Oryza sativa (japonica cultivar-group), mRNA Length = 706 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 81 gcggccgtgttcgccgtcgccgcga 105
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 177 gcggccgtgttcgccgtcgccgcga 201
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 179 gcggccgtgttcgccgtcgccgcga 203
>gb|BT014881.1| Arabidopsis thaliana At2g23620 gene, complete cds Length = 792 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||||||||| ||||||||||| Sbjct: 49 tgccatggcgcgtggtgctggtacaaggt 77
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 gccgtgttcgccgccgccgcgatgc 367 |||||| |||||||||||||||||| Sbjct: 1377718 gccgtgctcgccgccgccgcgatgc 1377694
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 gccgtgttcgccgccgccgcgatgc 367 |||||| |||||||||||||||||| Sbjct: 2695143 gccgtgctcgccgccgccgcgatgc 2695119
>gb|AC004482.3| Arabidopsis thaliana chromosome 2 clone F27L4 map CIC06C07, complete sequence Length = 92049 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||||||||| ||||||||||| Sbjct: 91235 tgccatggcgcgtggtgctggtacaaggt 91263
>gb|AF361627.1| Arabidopsis thaliana At2g23600/F26B6.25 mRNA, complete cds Length = 932 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 62 tgccacggcgcatggtgctggtacaaggt 90
>gb|AY056068.1| Arabidopsis thaliana At2g23600/F26B6.25 mRNA, complete cds Length = 792 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 49 tgccacggcgcatggtgctggtacaaggt 77
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ggtcgccgccctcgaggccgc 125 ||||||||||||||||||||| Sbjct: 3743823 ggtcgccgccctcgaggccgc 3743803
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 28641060 gcggccgtgttcgccgtcgccgcga 28641084
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 cgcggccgtgttcgccgccgccgcg 363 |||||||| |||||||||||||||| Sbjct: 3524043 cgcggccgggttcgccgccgccgcg 3524019 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 gcggccgtgttcgccgccgccgcg 363 |||||||||| ||||||||||||| Sbjct: 3546055 gcggccgtgtgcgccgccgccgcg 3546032
>gb|AY086590.1| Arabidopsis thaliana clone 26006 mRNA, complete sequence Length = 870 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||||||||| ||||| ||||||||||| Sbjct: 69 tgccacggcgcatggtgctggtacaaggt 97
>gb|BT002859.1| Arabidopsis thaliana clone RAFL14-80-F10 (R20356) putative acetone-cyanohydrin lyase (At2g23620) mRNA, complete cds Length = 935 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||||||||| ||||||||||| Sbjct: 92 tgccatggcgcgtggtgctggtacaaggt 120
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 105073 gcggccgtgttcgccgtcgccgcga 105097
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cacggccgctgctcgacgccg 232 ||||||||||||||||||||| Sbjct: 302735 cacggccgctgctcgacgccg 302755 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggccgtgttcgccgccgccg 361 |||||||||||||||||||| Sbjct: 5576099 ggccgtgttcgccgccgccg 5576080
>dbj|AK111242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D02, full insert sequence Length = 706 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 81 gcggccgtgttcgccgtcgccgcga 105
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 177 gcggccgtgttcgccgtcgccgcga 201
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcga 364 |||||||||||||||| |||||||| Sbjct: 178 gcggccgtgttcgccgtcgccgcga 202
>dbj|AP007282.1| Lotus japonicus genomic DNA, clone:LjT18J11, TM0184a, complete sequence Length = 81986 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 tgccacggcgcgtggtgttggtacaaggt 104 ||||| ||||| ||||||||||||||||| Sbjct: 776 tgccatggcgcttggtgttggtacaaggt 748
>ref|NM_127920.1| Arabidopsis thaliana catalytic/ hydrolase AT2G23560 mRNA, complete cds Length = 783 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 74 tctgccacggcgcgtggtgttggtacaaggtg 105 ||||||| || || |||||||||||||||||| Sbjct: 44 tctgccatggagcttggtgttggtacaaggtg 75
>ref|NM_189637.1| Oryza sativa (japonica cultivar-group), Ozsa8065 predicted mRNA Length = 1599 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgacctcgccgcgtccggca 166 |||||||||||||||||||| Sbjct: 117 cgacctcgccgcgtccggca 136
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgcggccgtgttcgccgccg 358 |||||||||||||||||||| Sbjct: 1510734 cgcggccgtgttcgccgccg 1510715
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgcggccgtgttcgccgccg 358 |||||||||||||||||||| Sbjct: 2741363 cgcggccgtgttcgccgccg 2741344
>ref|NG_005542.1| Homo sapiens homeobox C4/C5/C6 cluster (HOXC4/C5/C6@) on chromosome 12 Length = 40195 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacggcctctgccacggcgc 86 |||||||||||||||||||| Sbjct: 5410 cacggcctctgccacggcgc 5429
>gb|BT012414.1| Arabidopsis thaliana At2g23560 mRNA, complete cds Length = 783 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 74 tctgccacggcgcgtggtgttggtacaaggtg 105 ||||||| || || |||||||||||||||||| Sbjct: 44 tctgccatggagcttggtgttggtacaaggtg 75
>gb|U64862.2| Caenorhabditis elegans cosmid ZC8, complete sequence Length = 34351 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gagatgctgccaatcaacaa 467 |||||||||||||||||||| Sbjct: 14920 gagatgctgccaatcaacaa 14939
>gb|BT010709.1| Arabidopsis thaliana At2g23560 mRNA, complete cds Length = 944 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 74 tctgccacggcgcgtggtgttggtacaaggtg 105 ||||||| || || |||||||||||||||||| Sbjct: 144 tctgccatggagcttggtgttggtacaaggtg 175
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cgccgccgcgatgccgtgca 373 |||||||||||||||||||| Sbjct: 909757 cgccgccgcgatgccgtgca 909738
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccgctgctcgacgccgtgg 235 |||||||||||||||||||| Sbjct: 3529691 gccgctgctcgacgccgtgg 3529672
>emb|X61207.1|ABHISHAFE A.brasilense hisB, H, A, F and E genes for imidazole glycerolphosphate dehydratase, glutamine amidotransferase, phosphorybosilformimino-5-amino-phosphorybosil-4- imidazolecarboxamide isomerase, cyclase and phosphorybosil-AMP-cyclohydrolase Length = 4746 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gttccccggcaaggtcgccg 340 |||||||||||||||||||| Sbjct: 2576 gttccccggcaaggtcgccg 2595
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccgctgctcgacgccgtgg 235 |||||||||||||||||||| Sbjct: 172474 gccgctgctcgacgccgtgg 172455
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cgcggccgtgttcgccgccg 358 |||||||||||||||||||| Sbjct: 1642117 cgcggccgtgttcgccgccg 1642136
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ccggagggtgacggcgagcg 263 |||||||||||||||||||| Sbjct: 222237 ccggagggtgacggcgagcg 222256
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cggccgctgctcgacgccgt 233 |||||||||||||||||||| Sbjct: 302328 cggccgctgctcgacgccgt 302309
>emb|AL669817.7| Mouse DNA sequence from clone RP23-295J8 on chromosome 11, complete sequence Length = 120663 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 aaagtccaccaaaggatttg 552 |||||||||||||||||||| Sbjct: 65717 aaagtccaccaaaggatttg 65698
>gb|BC041835.1| Homo sapiens cDNA clone IMAGE:5268367 Length = 2718 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacggcctctgccacggcgc 86 |||||||||||||||||||| Sbjct: 1846 cacggcctctgccacggcgc 1865
>gb|AE005737.1| Caulobacter crescentus CB15 section 63 of 359 of the complete genome Length = 11321 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cgtcacggcggtcgacctcgccgc 158 |||||||||| ||||||||||||| Sbjct: 2819 cgtcacggcgatcgacctcgccgc 2842
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gtgcacggcctctgccacggcgcg 87 ||||||||| |||||||||||||| Sbjct: 4123798 gtgcacggcatctgccacggcgcg 4123821
>gb|DQ399904.1| Nocardiopsis sp. 90127 plasmid pSQ10, complete sequence Length = 18219 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gccgcggccgtgttcgccgc 356 |||||||||||||||||||| Sbjct: 13241 gccgcggccgtgttcgccgc 13222
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tgttcgccgccgccgcgatgccgt 370 |||||||||||||| ||||||||| Sbjct: 3085093 tgttcgccgccgccacgatgccgt 3085116
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gccgctgctcgacgccgtgg 235 |||||||||||||||||||| Sbjct: 2651367 gccgctgctcgacgccgtgg 2651386 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tcgacctcgccgcgtccggc 165 |||||||||||||||||||| Sbjct: 2307183 tcgacctcgccgcgtccggc 2307202
>ref|NM_001029810.1| Caenorhabditis elegans Lin-5 (Five) Interacting protein family member (lfi-1) (lfi-1) mRNA, complete cds Length = 7053 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gagatgctgccaatcaacaa 467 |||||||||||||||||||| Sbjct: 2759 gagatgctgccaatcaacaa 2778
>ref|NM_076446.2| Caenorhabditis elegans Lin-5 (Five) Interacting protein family member (lfi-1) (lfi-1) mRNA, complete cds Length = 6354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gagatgctgccaatcaacaa 467 |||||||||||||||||||| Sbjct: 2978 gagatgctgccaatcaacaa 2997
>ref|NM_076447.3| Caenorhabditis elegans Lin-5 (Five) Interacting protein family member (lfi-1) (lfi-1) mRNA, complete cds Length = 7561 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gagatgctgccaatcaacaa 467 |||||||||||||||||||| Sbjct: 2978 gagatgctgccaatcaacaa 2997
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atccacacaacacaagaaat 20 |||||||||||||||||||| Sbjct: 11563647 atccacacaacacaagaaat 11563666
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacggcctctgccacggcgc 86 |||||||||||||||||||| Sbjct: 100308 cacggcctctgccacggcgc 100327
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacggcctctgccacggcgc 86 |||||||||||||||||||| Sbjct: 159359 cacggcctctgccacggcgc 159378
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgacctcgccgcgtccggca 166 |||||||||||||||||||| Sbjct: 58921 cgacctcgccgcgtccggca 58902
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgacctcgccgcgtccggca 166 |||||||||||||||||||| Sbjct: 105892 cgacctcgccgcgtccggca 105873
>gb|AE005013.1| Halobacterium sp. NRC-1 section 44 of 170 of the complete genome Length = 13256 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 gccgtgttcgccgccgccgcgatg 366 |||||| ||||||||||||||||| Sbjct: 8366 gccgtgctcgccgccgccgcgatg 8389
>emb|Y17736.2|SCY17736 Streptomyces coelicolor partial nadE, glnE genes and orfu2E and orfu1E Length = 5190 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cggccgctgctcgacgccgt 233 |||||||||||||||||||| Sbjct: 4279 cggccgctgctcgacgccgt 4298
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cgcggccgtgttcgccgccg 358 |||||||||||||||||||| Sbjct: 2402819 cgcggccgtgttcgccgccg 2402838
>emb|AJ875394.1| Uncultured fungus 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 899 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 aagtccaccaaaggatttgg 553 |||||||||||||||||||| Sbjct: 568 aagtccaccaaaggatttgg 549
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atccacacaacacaagaaat 20 |||||||||||||||||||| Sbjct: 46657 atccacacaacacaagaaat 46676
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gcggccgtgttcgccgccgccgcg 363 |||||||||| ||||||||||||| Sbjct: 91750 gcggccgtgtgcgccgccgccgcg 91773 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,357,821 Number of Sequences: 3902068 Number of extensions: 4357821 Number of successful extensions: 88185 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83961 Number of HSP's gapped (non-prelim): 4202 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
