ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 434 bits (219), Expect = e-118 Identities = 381/435 (87%) Strand = Plus / Plus Query: 81 tcatcaatggagaaaggcacgcccgcgctcggttgggccgcgagagacgagtccggtctc 140 |||||||||| | ||||| ||| |||||||||||||| ||||| |||| ||||||| | Sbjct: 16 tcatcaatggcggaaggcttgccggcgctcggttgggctgcgagggacgcctccggtcac 75 Query: 141 ctctccccctacagcttctcgagaagggcccggaaggacgaggatgtgacgatcaaggtg 200 |||||||| ||||||||||||||||| | | ||||||||| |||||||||||||||||| Sbjct: 76 ctctccccttacagcttctcgagaagcgttccgaaggacgacgatgtgacgatcaaggtg 135 Query: 201 ctcttctgcgggatctgccacaccgacctccacatcgccaagaacgagtggggcaacgcc 260 ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 136 ctcttctgcgggatctgccacactgacctccacatcatcaagaacgactggggcaacgcc 195 Query: 261 ctctaccccatcgttcccgggcatgagattgtgggcgtcgtcaccgacgtcggccctggc 320 |||||||||||||| || ||||||||||| |||||||||||| || ||||||| ||| Sbjct: 196 ctctaccccatcgtcccagggcatgagatcgtgggcgtcgtcgccagcgtcggcagcggc 255 Query: 321 gtcaagagcttcaaggtcggggacacggtgggcgtgggctacttcgttgactcctgccgc 380 |||| |||||||||| ||| |||||||||||||||||||||||| | |||||||||||| Sbjct: 256 gtcagcagcttcaaggccggcgacacggtgggcgtgggctacttcctcgactcctgccgc 315 Query: 381 tcgtgcggcacctgcagcaaggggtacgagaactactgctccaccctcgtgctcacctcc 440 | ||| || ||||||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 316 acctgctacagctgcagcaaggggtacgagaacttctgccccaccctgacgctcacctcc 375 Query: 441 aacggcgtggactacgacggcgccaccacccaggggggtttctcagacgtgctcgtcgtc 500 |||||||| ||| || |||||||||||||||||| || ||||| ||||| ||||||||| Sbjct: 376 aacggcgtcgacggcggcggcgccaccacccagggcggcttctccgacgtcctcgtcgtc 435 Query: 501 aaccaggactacgtc 515 ||| ||||||||||| Sbjct: 436 aacaaggactacgtc 450
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 256 bits (129), Expect = 6e-65 Identities = 261/305 (85%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| ||| || ||||||||||||||||| |||||| ||||||| Sbjct: 13947026 gtgacgatcaaggtgctctactgtggcatctgccacaccgacctgcacatcatcaagaac 13947085 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| |||||||| ||||| || |||||||||||| Sbjct: 13947086 gagtggggcaacgccatgtaccccgtcgtccccgggcacgagatcgtcggcgtcgtcacc 13947145 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | | ||||||| ||| |||||||||||||||||||||||| Sbjct: 13947146 ggcgtcggcgccggcgtgacaaagttcaaggccggcgacacggtgggcgtgggctacttc 13947205 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| ||||||||||||||||||||||| | || Sbjct: 13947206 gtcgactcgtgccgcgcctgcgacagctgcggcaaggggtacgagaactactgcccgacg 13947265 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| || ||||| Sbjct: 13947266 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggcttctcc 13947325 Query: 486 gacgt 490 ||||| Sbjct: 13947326 gacgt 13947330 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| |||||| ||||| ||||||||||| |||| | ||||||| Sbjct: 13929519 gtgacgatcaaggtgctctactgcggcatctgtcacaccgacctgcacaccatcaagaac 13929460 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| ||||| || ||||| || ||||||||| || Sbjct: 13929459 gagtggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcgcc 13929400 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | || ||||||| ||| |||||||||||||||||||||||| Sbjct: 13929399 ggcgtcggcgccggcgtgaccaggttcaaggccggcgacacggtgggcgtgggctacttc 13929340 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| |||||||| |||||||||||||| | || Sbjct: 13929339 gtcgactcgtgccgcgcctgcgacagctgcggcaagggggacgagaactactgcccgacg 13929280 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| |||||||| Sbjct: 13929279 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggtttctcc 13929220 Query: 486 gacgtgctcgtcgtcaaccaggactacgt 514 ||||| | ||||| | ||||||||||| Sbjct: 13929219 gacgtcatggtcgtgaggcaggactacgt 13929191 Score = 200 bits (101), Expect = 3e-48 Identities = 263/317 (82%) Strand = Plus / Minus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||||||||| || Sbjct: 13933410 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgca 13933351 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 | ||| ||||||||| |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 13933350 cgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 13933291 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 13933290 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 13933231 Query: 353 cgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaa 412 |||||||| |||||| | || |||||| | |||| || |||| |||||||||||||||| Sbjct: 13933230 cgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaa 13933171 Query: 413 ctactgctccaccctcgtgctcacctccaacggcgtggactacgacggcgccaccaccca 472 ||||||| | || | ||| |||| || |||||| |||||||| |||||| ||||||| Sbjct: 13933170 ctactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccaccca 13933111 Query: 473 ggggggtttctcagacg 489 ||| || ||||| |||| Sbjct: 13933110 gggcggcttctccgacg 13933094 Score = 157 bits (79), Expect = 4e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||| ||||| || Sbjct: 13940709 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacactgacctgca 13940768 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 ||||| |||||| || |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 13940769 catcgtcaagaatgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 13940828 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 13940829 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 13940888 Query: 353 cgtgggctacttcgt 367 ||||||||||||||| Sbjct: 13940889 cgtgggctacttcgt 13940903
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 256 bits (129), Expect = 6e-65 Identities = 261/305 (85%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| ||| || ||||||||||||||||| |||||| ||||||| Sbjct: 100703 gtgacgatcaaggtgctctactgtggcatctgccacaccgacctgcacatcatcaagaac 100762 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| |||||||| ||||| || |||||||||||| Sbjct: 100763 gagtggggcaacgccatgtaccccgtcgtccccgggcacgagatcgtcggcgtcgtcacc 100822 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | | ||||||| ||| |||||||||||||||||||||||| Sbjct: 100823 ggcgtcggcgccggcgtgacaaagttcaaggccggcgacacggtgggcgtgggctacttc 100882 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| ||||||||||||||||||||||| | || Sbjct: 100883 gtcgactcgtgccgcgcctgcgacagctgcggcaaggggtacgagaactactgcccgacg 100942 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| || ||||| Sbjct: 100943 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggcttctcc 101002 Query: 486 gacgt 490 ||||| Sbjct: 101003 gacgt 101007 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| |||||| ||||| ||||||||||| |||| | ||||||| Sbjct: 83196 gtgacgatcaaggtgctctactgcggcatctgtcacaccgacctgcacaccatcaagaac 83137 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| ||||| || ||||| || ||||||||| || Sbjct: 83136 gagtggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcgcc 83077 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | || ||||||| ||| |||||||||||||||||||||||| Sbjct: 83076 ggcgtcggcgccggcgtgaccaggttcaaggccggcgacacggtgggcgtgggctacttc 83017 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| |||||||| |||||||||||||| | || Sbjct: 83016 gtcgactcgtgccgcgcctgcgacagctgcggcaagggggacgagaactactgcccgacg 82957 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| |||||||| Sbjct: 82956 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggtttctcc 82897 Query: 486 gacgtgctcgtcgtcaaccaggactacgt 514 ||||| | ||||| | ||||||||||| Sbjct: 82896 gacgtcatggtcgtgaggcaggactacgt 82868 Score = 200 bits (101), Expect = 3e-48 Identities = 263/317 (82%) Strand = Plus / Minus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||||||||| || Sbjct: 87087 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgca 87028 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 | ||| ||||||||| |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 87027 cgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 86968 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 86967 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 86908 Query: 353 cgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaa 412 |||||||| |||||| | || |||||| | |||| || |||| |||||||||||||||| Sbjct: 86907 cgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaa 86848 Query: 413 ctactgctccaccctcgtgctcacctccaacggcgtggactacgacggcgccaccaccca 472 ||||||| | || | ||| |||| || |||||| |||||||| |||||| ||||||| Sbjct: 86847 ctactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccaccca 86788 Query: 473 ggggggtttctcagacg 489 ||| || ||||| |||| Sbjct: 86787 gggcggcttctccgacg 86771 Score = 157 bits (79), Expect = 4e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||| ||||| || Sbjct: 94386 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacactgacctgca 94445 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 ||||| |||||| || |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 94446 catcgtcaagaatgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 94505 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 94506 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 94565 Query: 353 cgtgggctacttcgt 367 ||||||||||||||| Sbjct: 94566 cgtgggctacttcgt 94580
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 256 bits (129), Expect = 6e-65 Identities = 279/329 (84%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| ||| || ||||||||||||||||| |||||| ||||||| Sbjct: 49500 gtgacgatcaaggtgctctactgtggcatctgccacaccgacctgcacatcatcaagaac 49559 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| |||||||| ||||| || |||||||||||| Sbjct: 49560 gagtggggcaacgccatgtaccccgtcgtccccgggcacgagatcgtcggcgtcgtcacc 49619 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | | ||||||| ||| |||||||||||||||||||||||| Sbjct: 49620 ggcgtcggcgccggcgtgacaaagttcaaggccggcgacacggtgggcgtgggctacttc 49679 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| ||||||||||||||||||||||| | || Sbjct: 49680 gtcgactcgtgccgcgcctgcgacagctgcggcaaggggtacgagaactactgcccgacg 49739 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| || ||||| Sbjct: 49740 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggcttctcc 49799 Query: 486 gacgtgctcgtcgtcaaccaggactacgt 514 ||||| | ||||| | ||||||||||| Sbjct: 49800 gacgtcatggtcgtgaggcaggactacgt 49828 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||||||||||||||| |||||| ||||| ||||||||||| |||| | ||||||| Sbjct: 31993 gtgacgatcaaggtgctctactgcggcatctgtcacaccgacctgcacaccatcaagaac 31934 Query: 246 gagtggggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcacc 305 ||||||||||||||| | |||||| |||| ||||| || ||||| || ||||||||| || Sbjct: 31933 gagtggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcgcc 31874 Query: 306 gacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttc 365 | ||||||| | ||||| | || ||||||| ||| |||||||||||||||||||||||| Sbjct: 31873 ggcgtcggcgccggcgtgaccaggttcaaggccggcgacacggtgggcgtgggctacttc 31814 Query: 366 gttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgctccacc 425 || ||||| |||||| | |||| || |||| |||||||| |||||||||||||| | || Sbjct: 31813 gtcgactcgtgccgcgcctgcgacagctgcggcaagggggacgagaactactgcccgacg 31754 Query: 426 ctcgtgctcacctccaacggcgtggactacgacggcgccaccacccaggggggtttctca 485 | ||| |||| || |||||| |||||||| |||||||||||||||||| |||||||| Sbjct: 31753 atggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggtttctcc 31694 Query: 486 gacgtgctcgtcgtcaaccaggactacgt 514 ||||| | ||||| | ||||||||||| Sbjct: 31693 gacgtcatggtcgtgaggcaggactacgt 31665 Score = 200 bits (101), Expect = 3e-48 Identities = 263/317 (82%) Strand = Plus / Minus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||||||||| || Sbjct: 35884 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgca 35825 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 | ||| ||||||||| |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 35824 cgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 35765 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 35764 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 35705 Query: 353 cgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaa 412 |||||||| |||||| | || |||||| | |||| || |||| |||||||||||||||| Sbjct: 35704 cgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaa 35645 Query: 413 ctactgctccaccctcgtgctcacctccaacggcgtggactacgacggcgccaccaccca 472 ||||||| | || | ||| |||| || |||||| |||||||| |||||| ||||||| Sbjct: 35644 ctactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccaccca 35585 Query: 473 ggggggtttctcagacg 489 ||| || ||||| |||| Sbjct: 35584 gggcggcttctccgacg 35568 Score = 157 bits (79), Expect = 4e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||| ||||| || Sbjct: 43183 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacactgacctgca 43242 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 ||||| |||||| || |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 43243 catcgtcaagaatgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 43302 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 43303 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 43362 Query: 353 cgtgggctacttcgt 367 ||||||||||||||| Sbjct: 43363 cgtgggctacttcgt 43377
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full insert sequence Length = 1407 Score = 244 bits (123), Expect = 2e-61 Identities = 327/395 (82%) Strand = Plus / Plus Query: 96 ggcacgcccgcgctcggttgggccgcgagagacgagtccggtctcctctccccctacagc 155 |||||| | |||||||| ||||| ||| | |||| ||||| | |||||| || | |||| Sbjct: 128 ggcacggcggcgctcggctgggcggcgcgggacgcctccggccacctctcaccgttcagc 187 Query: 156 ttctcgagaagggcccggaaggacgaggatgtgacgatcaaggtgctcttctgcgggatc 215 ||| | ||||||| | | |||| || || ||||||||||||||||||| |||||| ||| Sbjct: 188 ttcacaagaagggttcaggaggaagacgacgtgacgatcaaggtgctctactgcggcatc 247 Query: 216 tgccacaccgacctccacatcgccaagaacgagtggggcaacgccctctaccccatcgtt 275 || ||||||||||| |||| | |||||||||||||||||||||| | |||||| |||| Sbjct: 248 tgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatgtaccccgtcgtc 307 Query: 276 cccgggcatgagattgtgggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaag 335 ||||| || ||||| || ||||||||| ||| ||||||| | ||||| | || |||||| Sbjct: 308 cccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtgaccaggttcaag 367 Query: 336 gtcggggacacggtgggcgtgggctacttcgttgactcctgccgctcgtgcggcacctgc 395 | ||| |||||||||||||||||||||||||| ||||| |||||| | |||| || |||| Sbjct: 368 gccggcgacacggtgggcgtgggctacttcgtcgactcgtgccgcgcctgcgacagctgc 427 Query: 396 agcaaggggtacgagaactactgctccaccctcgtgctcacctccaacggcgtggactac 455 |||||||| |||||||||||||| | || | ||| |||| || |||||| ||||||| Sbjct: 428 ggcaagggggacgagaactactgcccgacgatggtgatcacgtcgaacggcacggactac 487 Query: 456 gacggcgccaccacccaggggggtttctcagacgt 490 | |||||||||||||||||| |||||||| ||||| Sbjct: 488 ggcggcgccaccacccagggcggtttctccgacgt 522
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 230 bits (116), Expect = 4e-57 Identities = 287/344 (83%) Strand = Plus / Plus Query: 105 gcgctcggttgggccgcgagagacgagtccggtctcctctccccctacagcttctcgaga 164 |||||||| ||||| || || ||||| ||||| |||||||||||||||||||||| ||| Sbjct: 247 gcgctcggatgggcggccagggacgactccggcgtcctctccccctacagcttctctaga 306 Query: 165 agggcccggaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacacc 224 |||| | || ||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 307 agggttcctaaagacgacgatgtcacgatcaaggtgctctactgcgggatctgccacacc 366 Query: 225 gacctccacatcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcat 284 ||||| ||| || ||||||||| ||| | |||||| | ||||| |||| || ||||| Sbjct: 367 gacctgcacgtcatcaagaacgactggcgaaacgccatgtacccagtcgtcccggggcac 426 Query: 285 gagattgtgggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggac 344 ||||| |||||||| || |||||||||||| ||||||| | | ||||||| ||| ||| Sbjct: 427 gagatcgtgggcgtggtgaccgacgtcggcggcggcgtcacgcggttcaaggccggcgac 486 Query: 345 acggtgggcgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagcaagggg 404 ||||| ||||||||||||||||| | ||||||||||| |||| || |||| |||||||| Sbjct: 487 acggtcggcgtgggctacttcgtggggtcctgccgctcctgcgacagctgcggcaagggg 546 Query: 405 tacgagaactactgctccaccctcgtgctcacctccaacggcgt 448 |||| ||||||||| | |||||||||||||||||||||| Sbjct: 547 gacgacaactactgcgcggggatcgtgctcacctccaacggcgt 590
>gb|DQ358689.1| Phleum pratense cinnamyl alcohol dehydrogenase gene, partial cds Length = 1075 Score = 224 bits (113), Expect = 2e-55 Identities = 206/237 (86%) Strand = Plus / Plus Query: 280 ggcatgagattgtgggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcg 339 ||||||| ||||| ||||||||||||| ||| ||| |||||||||| |||||||| || Sbjct: 158 ggcatgaaattgtcggcgtcgtcaccggcgttggcagcggcgtcaagaacttcaaggccg 217 Query: 340 gggacacggtgggcgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagca 399 | || ||||| ||||| ||||||||| | ||| |||||||| | ||| || |||||||| Sbjct: 218 gcgagacggtaggcgttggctacttcatcgacacctgccgcacctgctacagctgcagca 277 Query: 400 aggggtacgagaactactgctccaccctcgtgctcacctccaacggcgtggactacgacg 459 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| ||||| Sbjct: 278 aggggtacgagaactactgccccaccatggtgctcacctccaacggcgtcgaccgcgacg 337 Query: 460 gcgccaccacccaggggggtttctcagacgtgctcgtcgtcaaccaggactacgtcc 516 ||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||| Sbjct: 338 gcgccaccacccaggggggcttctccgacgtcctcgtcgtcaacaaggactacgtcc 394 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 216 tgccacaccgacctccacatcgccaagaacgagtggggcaacgccctctaccccatcgtt 275 |||||||| |||||||||||| ||||||||| |||||||||||||| ||||||||||| Sbjct: 1 tgccacactgacctccacatcatcaagaacgattggggcaacgccctgtaccccatcgtc 60 Query: 276 cccggg 281 |||||| Sbjct: 61 cccggg 66
>gb|BT009165.1| Triticum aestivum clone wl1n.pk0095.d1:fis, full insert mRNA sequence Length = 1414 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Plus Query: 192 atcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaacgagtgg 251 ||||||||||||||||||||| | |||||||| ||||||||| || ||||||||||| Sbjct: 206 atcaaggtgctcttctgcgggctttgccacactgacctccacgtcatcaagaacgagttt 265 Query: 252 ggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcaccgacgtc 311 ||||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||| Sbjct: 266 ggcaacgccaagtaccccgtcgttcccgggcacgagatcgtcggcgtcgtcaccgacgtc 325 Query: 312 ggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttcgttgac 371 ||| | ||||||| ||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct: 326 ggctccggcgtcacaagcttcaagcccggcgacacggtgggcgtgggctacttcgtcgac 385 Query: 372 tcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgc 419 ||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 386 tcctgccgcagctgcgacagctgcagcaaggggtacgagagctactgc 433 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 458 cggcgccaccacccaggggggtttctcagacgtgctcgtcgtcaaccag 506 ||||||||||||| |||| || ||||| |||| ||||||||| ||||| Sbjct: 484 cggcgccaccaccaagggcggcttctccgacgccctcgtcgtccaccag 532
>gb|AY106482.1| Zea mays PCO097882 mRNA sequence Length = 1500 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Plus Query: 192 atcaaggtgctcttctgcgggatctgccacaccgacctccacatcgccaagaacgagtgg 251 ||||||||||||||||||||| | |||||||| ||||||||| || ||||||||||| Sbjct: 319 atcaaggtgctcttctgcgggctttgccacactgacctccacgtcatcaagaacgagttt 378 Query: 252 ggcaacgccctctaccccatcgttcccgggcatgagattgtgggcgtcgtcaccgacgtc 311 ||||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||| Sbjct: 379 ggcaacgccaagtaccccgtcgttcccgggcacgagatcgtcggcgtcgtcaccgacgtc 438 Query: 312 ggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctacttcgttgac 371 ||| | ||||||| ||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct: 439 ggctccggcgtcacaagcttcaagcccggcgacacggtgggcgtgggctacttcgtcgac 498 Query: 372 tcctgccgctcgtgcggcacctgcagcaaggggtacgagaactactgc 419 ||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 499 tcctgccgcagctgcgacagctgcagcaaggggtacgagagctactgc 546 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 458 cggcgccaccacccaggggggtttctcagacgtgctcgtcgtcaaccag 506 ||||||||||||| |||| || ||||| |||| ||||||||| ||||| Sbjct: 597 cggcgccaccaccaagggcggcttctccgacgccctcgtcgtccaccag 645
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full insert sequence Length = 1084 Score = 200 bits (101), Expect = 3e-48 Identities = 263/317 (82%) Strand = Plus / Minus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||||||||| || Sbjct: 996 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgca 937 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 | ||| ||||||||| |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 936 cgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 877 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 876 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 817 Query: 353 cgtgggctacttcgttgactcctgccgctcgtgcggcacctgcagcaaggggtacgagaa 412 |||||||| |||||| | || |||||| | |||| || |||| |||||||||||||||| Sbjct: 816 cgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaa 757 Query: 413 ctactgctccaccctcgtgctcacctccaacggcgtggactacgacggcgccaccaccca 472 ||||||| | || | ||| |||| || |||||| |||||||| |||||| ||||||| Sbjct: 756 ctactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccaccca 697 Query: 473 ggggggtttctcagacg 489 ||| || ||||| |||| Sbjct: 696 gggcggcttctccgacg 680
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full insert sequence Length = 1916 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||| ||||| || Sbjct: 699 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacactgacctgca 758 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 ||||| |||||| || |||||||||||| | ||||||||||| ||||| || ||||| || Sbjct: 759 catcgtcaagaatgattggggcaacgccatgtaccccatcgtccccggccacgagatcgt 818 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 819 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 878 Query: 353 cgtgggctacttcgt 367 ||||||||||||||| Sbjct: 879 cgtgggctacttcgt 893
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full insert sequence Length = 2015 Score = 157 bits (79), Expect = 4e-35 Identities = 166/195 (85%) Strand = Plus / Minus Query: 173 gaaggacgaggatgtgacgatcaaggtgctcttctgcgggatctgccacaccgacctcca 232 ||||||||| || || || ||||||||||||| |||||| ||||||||||| ||||| || Sbjct: 1098 gaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacactgacctgca 1039 Query: 233 catcgccaagaacgagtggggcaacgccctctaccccatcgttcccgggcatgagattgt 292 ||||| |||||| || |||||||||||| | |||||| |||| ||||| || ||||| || Sbjct: 1038 catcgtcaagaatgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgt 979 Query: 293 gggcgtcgtcaccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtggg 352 ||||||||||||| ||||||| | ||||| | | ||||||| ||| ||||||||||| Sbjct: 978 cggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtggg 919 Query: 353 cgtgggctacttcgt 367 ||||||||||||||| Sbjct: 918 cgtgggctacttcgt 904
>gb|DQ384279.1| Mastigamoeba balamuthi alcohol dehydrogenase-like protein mRNA, partial cds Length = 1017 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 214 tctgccacaccgacctccacatcgccaagaacgagtggggcaacgccctctaccccatcg 273 |||||||||||||| ||||||| || | ||||| |||||||||||| || |||||||| Sbjct: 113 tctgccacaccgacgtccacatgacccacaacgactggggcaacgccgccttccccatcg 172 Query: 274 ttcccgggcatgag 287 | |||||||||||| Sbjct: 173 tccccgggcatgag 186
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 198 gtgctcttctgcgggatctgccacaccgacctccacatcgccaagaac 245 ||||||| |||||| |||||||||| |||||||||||||| |||||| Sbjct: 679990 gtgctctactgcggcgtctgccacacagacctccacatcgcaaagaac 679943
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 195 aaggtgctcttctgcgggatctgccacaccgacctccac 233 |||||||||| |||||||||||||||||| ||| ||||| Sbjct: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 195 aaggtgctcttctgcgggatctgccacaccgacctccac 233 |||||||||| |||||||||||||||||| ||| ||||| Sbjct: 190 aaggtgctctactgcgggatctgccacacggacatccac 228
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 195 aaggtgctcttctgcgggatctgccacaccgacctccac 233 |||||||||| |||||||||||||||||| ||| ||||| Sbjct: 246 aaggtgctctactgcgggatctgccacacggacatccac 284
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 304 ccgacgtcggccctggcgtcaagagcttcaaggtcggggacacggtgggcgtgggctact 363 |||| |||||||| ||||||| || ||||||||||| ||| ||||||||| |||| | Sbjct: 9107 ccgaggtcggccccggcgtcaccaggttcaaggtcggcgaccgggtgggcgtcggctgca 9166 Query: 364 tcgttgactcctgccgc 380 | || |||||||||||| Sbjct: 9167 tggtcgactcctgccgc 9183
>emb|CR931741.1| Medicago truncatula chromosome 5 clone mte1-54m21, COMPLETE SEQUENCE Length = 123541 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 207 tgcgggatctgccacaccgacctccacatcgccaagaacgagtggggca 255 ||||| || |||||||| ||||||||||| |||||||||| ||||||| Sbjct: 51067 tgcggaatatgccacacagacctccacatggccaagaacggatggggca 51115
>ref|NM_184965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2121 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 700 gtggactacgacggcgccaccac 722
>ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 604 gtggactacgacggcgccaccac 626
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 7220 gtggactacgacggcgccaccac 7198
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 31705143 gtggactacgacggcgccaccac 31705165 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 31673447 gtggactacgacggcgccaccac 31673469 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 caagaacgagtggggcaacgcc 260 |||||||||||||||||||||| Sbjct: 6422499 caagaacgagtggggcaacgcc 6422520
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 195 aaggtgctcttctgcgggatctgccacaccgacctccac 233 |||||||||| ||| |||||||||||||| ||| ||||| Sbjct: 301 aaggtgctctactgtgggatctgccacacagacatccac 339
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 30369 gtggactacgacggcgccaccac 30391
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 87393 gtggactacgacggcgccaccac 87415
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 26550507 gtggactacgacggcgccaccac 26550529 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacct 229 ||||||||||||||| | ||||||||| |||||||| ||||| Sbjct: 8597013 gtgacgatcaaggtgaagtactgcgggatgtgccacacggacct 8596970
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 31795659 gtggactacgacggcgccaccac 31795681 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 31763963 gtggactacgacggcgccaccac 31763985 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 caagaacgagtggggcaacgcc 260 |||||||||||||||||||||| Sbjct: 6421712 caagaacgagtggggcaacgcc 6421733
>dbj|AK120949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038D05, full insert sequence Length = 2125 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 593 gtggactacgacggcgccaccac 615
>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full insert sequence Length = 2366 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 1628 gtggactacgacggcgccaccac 1606
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 gtggactacgacggcgccaccac 469 ||||||||||||||||||||||| Sbjct: 819 gtggactacgacggcgccaccac 841
>ref|NM_187696.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 caagaacgagtggggcaacgcc 260 |||||||||||||||||||||| Sbjct: 156 caagaacgagtggggcaacgcc 177
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 caagaacgagtggggcaacgcc 260 |||||||||||||||||||||| Sbjct: 102625 caagaacgagtggggcaacgcc 102646
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 210 gggatctgccacaccgacctccacatcgccaagaacgagtgg 251 |||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 10350548 gggatctgccactccgacctgcacagcatcaagaacgagtgg 10350507
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 210 gggatctgccacaccgacctccacatcgccaagaacgagtgg 251 |||||||||||| ||||||| |||| | ||||||||||||| Sbjct: 51506 gggatctgccactccgacctgcacagcatcaagaacgagtgg 51465
>gb|AF039554.3|AF039554 Acanthamoeba culbertsoni cysteine proteinase mRNA, partial cds Length = 1555 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 atcgccaagaacgagtggggca 255 |||||||||||||||||||||| Sbjct: 1009 atcgccaagaacgagtggggca 1030
>ref|XM_505945.1| Yarrowia lipolytica CLIB122, YALI0F27401g predicted mRNA Length = 1698 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgat 193 ||||||||||||||||||||| Sbjct: 33 gaaggacgaggatgtgacgat 53
>gb|BT008979.1| Triticum aestivum clone wdk2c.pk005.k24:fis, full insert mRNA sequence Length = 1418 Score = 42.1 bits (21), Expect = 1.8 Identities = 87/109 (79%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccacatcgccaagaacgagtggggcaacgccctcta 265 |||||||||||||||| | ||||| |||| | ||||||||| ||| |||||| || Sbjct: 256 ctgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgccaagta 315 Query: 266 ccccatcgttcccgggcatgagattgtgggcgtcgtcaccgacgtcggc 314 |||||| |||||||||| ||||| | |||| |||||||| |||||| Sbjct: 316 ccccatgattcccgggcacgagatcgccggcgaggtcaccgaggtcggc 364
>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 9/10 Length = 349115 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 atctgccacaccgacctccac 233 ||||||||||||||||||||| Sbjct: 176369 atctgccacaccgacctccac 176349
>emb|BX248360.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 7/8 Length = 349659 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 193 tcaaggtgctcttctgcgggatctgccacaccgacctccac 233 ||||||||||| || ||| ||||||||||| ||||||||| Sbjct: 79461 tcaaggtgctcacctccggcatctgccacactgacctccac 79421
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtccggtctcctctcccccta 151 ||||||||||||||||||||| Sbjct: 5990666 gtccggtctcctctcccccta 5990686
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 atctgccacaccgacctccac 233 ||||||||||||||||||||| Sbjct: 2996650 atctgccacaccgacctccac 2996630
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtccggtctcctctcccccta 151 ||||||||||||||||||||| Sbjct: 5990659 gtccggtctcctctcccccta 5990679
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtccggtctcctctcccccta 151 ||||||||||||||||||||| Sbjct: 52368 gtccggtctcctctcccccta 52348
>emb|AL928778.4|CNS08CC8 Oryza sativa chromosome 12, . BAC OSJNBb0074J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125153 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtccggtctcctctcccccta 151 ||||||||||||||||||||| Sbjct: 114680 gtccggtctcctctcccccta 114660
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gaaggacgaggatgtgacgat 193 ||||||||||||||||||||| Sbjct: 3478813 gaaggacgaggatgtgacgat 3478833
>ref|NM_119959.2| Arabidopsis thaliana ELI3-1 (ELICITOR-ACTIVATED GENE 3); oxidoreductase/ zinc ion binding AT4G37980 (ELI3-1) transcript variant AT4G37980.1 mRNA, complete cds Length = 1353 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 280 gggcatgagattgtgggcgt 299
>ref|NM_001036728.1| Arabidopsis thaliana ELI3-1 (ELICITOR-ACTIVATED GENE 3); oxidoreductase/ zinc ion binding AT4G37980 (ELI3-1) transcript variant AT4G37980.2 mRNA, complete cds Length = 1220 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 428 gggcatgagattgtgggcgt 447
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctgccgctcgtgcggcac 391 |||||||||||||||||||| Sbjct: 524732 tcctgccgctcgtgcggcac 524713
>ref|XM_474988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacct 229 ||||||||||||||| | ||||||||| |||||||| ||||| Sbjct: 112 gtgacgatcaaggtgaagtactgcgggatgtgccacacggacct 155
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 agcttcaaggtcggggacac 346 |||||||||||||||||||| Sbjct: 333316 agcttcaaggtcggggacac 333297
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 actacgacggcgccaccacc 470 |||||||||||||||||||| Sbjct: 95490 actacgacggcgccaccacc 95471
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 actacgacggcgccaccacc 470 |||||||||||||||||||| Sbjct: 137023 actacgacggcgccaccacc 137004
>gb|AY302079.1| Arabidopsis thaliana cinnamyl alcohol dehydrogenase-like protein (CAD7) mRNA, complete cds Length = 1074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 199 gggcatgagattgtgggcgt 218
>ref|XM_741737.1| Aspergillus fumigatus Af293 alcohol dehydrogenase (Afu7g01010) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tctgccacaccgacctccac 233 |||||||||||||||||||| Sbjct: 137 tctgccacaccgacctccac 156
>ref|XM_569431.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC01210) partial mRNA Length = 2105 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 agcttcaaggtcggggacac 346 |||||||||||||||||||| Sbjct: 1175 agcttcaaggtcggggacac 1156
>emb|X67816.1|ATELI31 A.thaliana mRNA for Eli3-1 Length = 1340 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 244 gggcatgagattgtgggcgt 263
>ref|XM_776094.1| PREDICTED: Strongylocentrotus purpuratus similar to ganglioside induced differentiation associated protein 2 (LOC575709), mRNA Length = 981 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 tcgtcaaccaggactacgtc 515 |||||||||||||||||||| Sbjct: 620 tcgtcaaccaggactacgtc 639
>gb|AY050931.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase ELI3-1 (At4g37980) mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 248 gggcatgagattgtgggcgt 267
>gb|AY040066.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase ELI3-1 (At4g37980) mRNA, complete cds Length = 1074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 199 gggcatgagattgtgggcgt 218
>gb|AF360225.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase ELI3-1 (At4g37980) mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 248 gggcatgagattgtgggcgt 267
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ctacgacggcgccaccaccc 471 |||||||||||||||||||| Sbjct: 222678 ctacgacggcgccaccaccc 222697
>emb|AJ291604.1|DME291604 Drosophila melanogaster mRNA for gamma-tubulin ring protein (grip128 gene) Length = 3279 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 1608 gtgcggcacctgcagcaagg 1589
>gb|AE012164.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 72 of 460 of the complete genome Length = 10275 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ctacgacggcgccaccaccc 471 |||||||||||||||||||| Sbjct: 9577 ctacgacggcgccaccaccc 9596
>ref|NM_132802.2| Drosophila melanogaster CG9201-RB, transcript variant B (Grip128), mRNA Length = 3451 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 1653 gtgcggcacctgcagcaagg 1634
>ref|NM_001038757.1| Drosophila melanogaster CG9201-RC, transcript variant C (Grip128), mRNA Length = 3626 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 1761 gtgcggcacctgcagcaagg 1742
>gb|AY060636.1| Drosophila melanogaster GH05289 full length cDNA Length = 3642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 1761 gtgcggcacctgcagcaagg 1742
>gb|AY056385.1| Arabidopsis thaliana AT4g37980/F20D10_100 mRNA, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 278 gggcatgagattgtgggcgt 297
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 taccccatcgttcccgggcatgag 287 |||||||| ||||||||||||||| Sbjct: 280 taccccatggttcccgggcatgag 303 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccac 233 |||||| ||||||||||| ||||||||| Sbjct: 222 ctgcggcatctgccacactgacctccac 249
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 taccccatcgttcccgggcatgag 287 |||||||| ||||||||||||||| Sbjct: 280 taccccatggttcccgggcatgag 303 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccac 233 |||||| ||||||||||| ||||||||| Sbjct: 222 ctgcggcatctgccacactgacctccac 249
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccac 233 |||||| ||||||||||| ||||||||| Sbjct: 171 ctgcggcatctgccacactgacctccac 198
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccac 233 |||||| ||||||||||| ||||||||| Sbjct: 171 ctgcggcatctgccacactgacctccac 198
>gb|AY050407.1| Arabidopsis thaliana AT4g37980/F20D10_100 mRNA, complete cds Length = 1326 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 280 gggcatgagattgtgggcgt 299
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ctacgacggcgccaccaccc 471 |||||||||||||||||||| Sbjct: 4242165 ctacgacggcgccaccaccc 4242146
>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone BACR36D15, complete sequence Length = 159513 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 107403 gtgcggcacctgcagcaagg 107422
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 actacgacggcgccaccacc 470 |||||||||||||||||||| Sbjct: 23033010 actacgacggcgccaccacc 23032991
>gb|BT002729.1| Arabidopsis thaliana At4g37980/F20D10_100 gene, complete cds Length = 1074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gggcatgagattgtgggcgt 298 |||||||||||||||||||| Sbjct: 199 gggcatgagattgtgggcgt 218
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtcaccgacgtcggccctg 318 |||||||||||||||||||| Sbjct: 3087524 cgtcaccgacgtcggccctg 3087505
>dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021L06, full insert sequence Length = 1355 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacct 229 ||||||||||||||| | ||||||||| |||||||| ||||| Sbjct: 208 gtgacgatcaaggtgaagtactgcgggatgtgccacacggacct 251
>gb|BT021434.1| Drosophila melanogaster GH21414 full insert cDNA Length = 3642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 1761 gtgcggcacctgcagcaagg 1742
>dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M10, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacct 229 ||||||||||||||| | ||||||||| |||||||| ||||| Sbjct: 211 gtgacgatcaaggtgaagtactgcgggatgtgccacacggacct 254
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete sequence Length = 300896 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gtgcggcacctgcagcaagg 402 |||||||||||||||||||| Sbjct: 65301 gtgcggcacctgcagcaagg 65320
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacct 229 ||||||| |||||||||||||||| Sbjct: 2217130 ctgcggggtctgccacaccgacct 2217153
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 186 gtgacgatcaaggtgctcttctgcgggatctgccacaccgacct 229 ||||||||||||||| | ||||||||| |||||||| ||||| Sbjct: 57456 gtgacgatcaaggtgaagtactgcgggatgtgccacacggacct 57413
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 taccccatcgttcccgggcatgag 287 |||||||| ||||||||||||||| Sbjct: 270 taccccatggttcccgggcatgag 293 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ctgcgggatctgccacaccgacctccac 233 |||||| ||||||||||| ||||||||| Sbjct: 212 ctgcggcatctgccacactgacctccac 239 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,145,048 Number of Sequences: 3902068 Number of extensions: 3145048 Number of successful extensions: 123841 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123103 Number of HSP's gapped (non-prelim): 727 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
