Clone Name | bart40f05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_507554.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1218 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 164 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 223 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 224 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 283 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 284 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 343 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 344 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 403 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 404 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 463 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 464 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 523 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 524 ccaaggtatacaacgaaact 543
>ref|XM_468525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 164 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 223 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 224 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 283 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 284 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 343 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 344 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 403 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 404 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 463 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 464 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 523 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 524 ccaaggtatacaacgaaact 543
>ref|XM_507553.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1334 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 163 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 222 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 223 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 282 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 283 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 342 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 343 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 402 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 403 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 462 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 463 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 522 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 523 ccaaggtatacaacgaaact 542
>ref|XM_507067.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1381 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 210 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 269 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 270 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 329 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 330 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 389 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 390 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 449 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 450 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 509 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 510 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 569 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 570 ccaaggtatacaacgaaact 589
>dbj|AK122029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F11, full insert sequence Length = 1381 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 210 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 269 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 270 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 329 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 330 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 389 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 390 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 449 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 450 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 509 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 510 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 569 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 570 ccaaggtatacaacgaaact 589
>dbj|AK104532.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C07, full insert sequence Length = 1218 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 164 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 223 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 224 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 283 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 284 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 343 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 344 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 403 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 404 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 463 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 464 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 523 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 524 ccaaggtatacaacgaaact 543
>dbj|AK104364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C11, full insert sequence Length = 1218 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 164 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 223 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 224 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 283 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 284 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 343 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 344 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 403 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 404 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 463 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 464 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 523 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 524 ccaaggtatacaacgaaact 543
>dbj|AK064830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F10, full insert sequence Length = 1335 Score = 226 bits (114), Expect = 7e-56 Identities = 314/380 (82%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 163 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 222 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 223 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 282 Query: 332 caacccacctccgaggaaaccaggaccaaggcactgcaggccttgctctcttgccctaca 391 || |||| |||||| ||| |||||||||||| |||||||| ||||||| || ||||| Sbjct: 283 cagcccatctccgacgaacacaggaccaaggccctgcaggctctgctctcctgtcctact 342 Query: 392 tcctctatccacaccgacaagcctgcacaggacatgctccaagtgcagaacacgttccct 451 ||||| || |||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct: 343 tcctccattcacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccg 402 Query: 452 ctccccatcgacgatgatctt---cccggagtttacctctgtggttaccattctgagaac 508 |||||||||||| || ||||| || || |||||||||||||| || |||||| | | Sbjct: 403 ctccccatcgacaatcatcttctccctggtgtttacctctgtggctatcattctcaagat 462 Query: 509 tcatatggagcaacatcttatcttattcttcacccggaagggaacataatggttgacagc 568 |||||||||||||| ||||||||| | || || || || |||||| | ||||||||| Sbjct: 463 tcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttgacagc 522 Query: 569 ccaaggtatacaccgaaact 588 |||||||||||| ||||||| Sbjct: 523 ccaaggtatacaacgaaact 542
>dbj|AK065885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A06, full insert sequence Length = 3391 Score = 208 bits (105), Expect = 2e-50 Identities = 329/403 (81%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 189 ccccggcgctcgacagcaggcggcgcccgcagaacgtgtccggcgacttcttcgtcgatc 248 ||||||| ||||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 2248 ccccggcactcgacagcggccgccgcccgcagaacgtccccggcgacttcttcgtcgatc 2307 Query: 249 accggtgcatcgactgtgccacctgcaggtggatggctccggaggtgttcaagagagtcg 308 |||| ||||||||||| |||||| | |||||||| ||||||||||||||||| || | Sbjct: 2308 accgatgcatcgactgccagacctgccgctggatggcgccggaggtgttcaagagggtgg 2367 Query: 309 acggccagtccgccgtggcggcgcaacccacctccgaggaaaccaggaccaaggcactgc 368 |||| | |||||||||| ||||| |||| |||||| || |||||||||||| |||| Sbjct: 2368 acggaaaagccgccgtggccgcgcatcccatctccgacgaccacaggaccaaggccctgc 2427 Query: 369 aggccttgctctcttgccctacatcctctatccacaccgacaagcctgcacaggacatgc 428 |||| ||||||| || ||||| |||| || |||||||| || |||||| | ||||| | Sbjct: 2428 aggctctgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacattc 2487 Query: 429 tccaagtgcagaacacgttccctctccccatcgacgatgatctt---cccggagtttacc 485 | |||||||| |||| |||||| |||||||||||| | ||||| || || ||||| | Sbjct: 2488 ttcaagtgcaaaacatgttccccctccccatcgacactcatcttctccctggtgtttatc 2547 Query: 486 tctgtggttaccattctgagaactcatatggagcaacatcttatcttattcttcacccgg 545 |||||||| |||||||| |||| | ||||||||| ||||||||||| || || | Sbjct: 2548 attgtggttatcattctgaagactcgtttggagcaacttcttatcttataacccatccag 2607 Query: 546 aagggaacataatggttgacagcccaaggtatacaccgaaact 588 | || |||||| | || |||||||||||||||||| ||||||| Sbjct: 2608 atggaaacatactagtcgacagcccaaggtatacaacgaaact 2650
>ref|XM_468526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1144 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 159 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 218 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 219 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 278 Query: 332 caacccacctccga 345 || |||| |||||| Sbjct: 279 cagcccatctccga 292 Score = 91.7 bits (46), Expect = 2e-15 Identities = 141/172 (81%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 420 aggacatgctccaagtgcagaacacgttccctctccccatcgacgatgatcttccc---g 476 ||||||| || |||||||| |||| |||||| |||||||||||| || |||||| | | Sbjct: 300 aggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatcatcttctccctg 359 Query: 477 gagtttacctctgtggttaccattctgagaactcatatggagcaacatcttatcttattc 536 | |||||||||||||| || |||||| | | |||||||||||||| ||||||||| | Sbjct: 360 gtgtttacctctgtggctatcattctcaagattcatatggagcaacttcttatcttttaa 419 Query: 537 ttcacccggaagggaacataatggttgacagcccaaggtatacaccgaaact 588 || || || || |||||| | ||||||||||||||||||||| ||||||| Sbjct: 420 cccatccagatggaaacatactagttgacagcccaaggtatacaacgaaact 471
>dbj|AK065244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I14, full insert sequence Length = 1142 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcgatcaccggtgcatcgactgtgccacc 271 |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct: 157 cgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacc 216 Query: 272 tgcaggtggatggctccggaggtgttcaagagagtcgacggccagtccgccgtggcggcg 331 ||| | ||||||||| |||||||||||||||| || ||||| | ||||||| || ||| Sbjct: 217 tgccgctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcg 276 Query: 332 caacccacctccga 345 || |||| |||||| Sbjct: 277 cagcccatctccga 290 Score = 91.7 bits (46), Expect = 2e-15 Identities = 141/172 (81%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 420 aggacatgctccaagtgcagaacacgttccctctccccatcgacgatgatcttccc---g 476 ||||||| || |||||||| |||| |||||| |||||||||||| || |||||| | | Sbjct: 298 aggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatcatcttctccctg 357 Query: 477 gagtttacctctgtggttaccattctgagaactcatatggagcaacatcttatcttattc 536 | |||||||||||||| || |||||| | | |||||||||||||| ||||||||| | Sbjct: 358 gtgtttacctctgtggctatcattctcaagattcatatggagcaacttcttatcttttaa 417 Query: 537 ttcacccggaagggaacataatggttgacagcccaaggtatacaccgaaact 588 || || || || |||||| | ||||||||||||||||||||| ||||||| Sbjct: 418 cccatccagatggaaacatactagttgacagcccaaggtatacaacgaaact 469
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 375 tgctctcttgccctacatcctctatccacaccgacaagcctgcacaggacatgctccaag 434 ||||||| || ||||| ||||| || |||||||| || |||||| ||||||| || |||| Sbjct: 35681471 tgctctcctgtcctacttcctccattcacaccgagaaacctgcaaaggacattcttcaag 35681412 Query: 435 tgcagaacacgttccctctccccatcgacgatgatcttc 473 |||| |||| |||||| |||||||||||| || |||||| Sbjct: 35681411 tgcaaaacatgttcccgctccccatcgacaatcatcttc 35681373 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 189 ccccggcgctcgacagcaggcggcgcccgcagaacgtgtccggcgacttcttcgtcg 245 ||||||| ||||||||| | || |||||||||||||| |||||||||||||||||| Sbjct: 35685914 ccccggcactcgacagcggccgccgcccgcagaacgtccccggcgacttcttcgtcg 35685858 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 375 tgctctcttgccctacatcctctatccacaccgacaagcctgcacaggacatgctccaag 434 ||||||| || ||||| |||| || |||||||| || |||||| | ||||| || |||| Sbjct: 35685489 tgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacattcttcaag 35685430 Query: 435 tgcagaacacgttccctctccccatcgac 463 |||| |||| |||||| |||||||||||| Sbjct: 35685429 tgcaaaacatgttccccctccccatcgac 35685401 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 289 ggaggtgttcaagagagtcgacggccagtccgccgtggcggcgcaacccacctccgagga 348 ||||||||||||||| || ||||| | |||||||||| ||||| |||| |||||| || Sbjct: 35685641 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 35685582 Query: 349 aaccaggaccaaggcactgcagg 371 |||||||||||| ||||||| Sbjct: 35685581 ccacaggaccaaggccctgcagg 35685559 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 289 ggaggtgttcaagagagtcgacggccagtccgccgtggcggcgcaacccacctccgagga 348 ||||||||||||||| || ||||| | ||||||| || ||||| |||| |||||| || Sbjct: 35681623 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 35681564 Query: 349 aaccaggaccaaggcactgcagg 371 | |||||||||||| ||||||| Sbjct: 35681563 acacaggaccaaggccctgcagg 35681541 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcg 245 |||||||||||||| |||||||||||||||||| Sbjct: 35681862 cgcccgcagaacgtccccggcgacttcttcgtcg 35681829 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 479 gtttacctctgtggttaccattctgagaactcatatggagcaacatcttatctt 532 |||||||||||||| || |||||| | | |||||||||||||| ||||||||| Sbjct: 35681270 gtttacctctgtggctatcattctcaagattcatatggagcaacttcttatctt 35681217 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 488 tgtggttaccattctgagaactcatatggagcaacatcttatcttat 534 |||||||| |||||||| |||| | ||||||||| ||||||||||| Sbjct: 35685267 tgtggttatcattctgaagactcgtttggagcaacttcttatcttat 35685221 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 acagcccaaggtatacaccgaaact 588 ||||||||||||||||| ||||||| Sbjct: 35680925 acagcccaaggtatacaacgaaact 35680901
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 375 tgctctcttgccctacatcctctatccacaccgacaagcctgcacaggacatgctccaag 434 ||||||| || ||||| ||||| || |||||||| || |||||| ||||||| || |||| Sbjct: 42085 tgctctcctgtcctacttcctccattcacaccgagaaacctgcaaaggacattcttcaag 42026 Query: 435 tgcagaacacgttccctctccccatcgacgatgatcttc 473 |||| |||| |||||| |||||||||||| || |||||| Sbjct: 42025 tgcaaaacatgttcccgctccccatcgacaatcatcttc 41987 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 189 ccccggcgctcgacagcaggcggcgcccgcagaacgtgtccggcgacttcttcgtcg 245 ||||||| ||||||||| | || |||||||||||||| |||||||||||||||||| Sbjct: 46528 ccccggcactcgacagcggccgccgcccgcagaacgtccccggcgacttcttcgtcg 46472 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 375 tgctctcttgccctacatcctctatccacaccgacaagcctgcacaggacatgctccaag 434 ||||||| || ||||| |||| || |||||||| || |||||| | ||||| || |||| Sbjct: 46103 tgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacattcttcaag 46044 Query: 435 tgcagaacacgttccctctccccatcgac 463 |||| |||| |||||| |||||||||||| Sbjct: 46043 tgcaaaacatgttccccctccccatcgac 46015 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 289 ggaggtgttcaagagagtcgacggccagtccgccgtggcggcgcaacccacctccgagga 348 ||||||||||||||| || ||||| | |||||||||| ||||| |||| |||||| || Sbjct: 46255 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 46196 Query: 349 aaccaggaccaaggcactgcagg 371 |||||||||||| ||||||| Sbjct: 46195 ccacaggaccaaggccctgcagg 46173 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 289 ggaggtgttcaagagagtcgacggccagtccgccgtggcggcgcaacccacctccgagga 348 ||||||||||||||| || ||||| | ||||||| || ||||| |||| |||||| || Sbjct: 42237 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 42178 Query: 349 aaccaggaccaaggcactgcagg 371 | |||||||||||| ||||||| Sbjct: 42177 acacaggaccaaggccctgcagg 42155 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 212 cgcccgcagaacgtgtccggcgacttcttcgtcg 245 |||||||||||||| |||||||||||||||||| Sbjct: 42476 cgcccgcagaacgtccccggcgacttcttcgtcg 42443 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 479 gtttacctctgtggttaccattctgagaactcatatggagcaacatcttatctt 532 |||||||||||||| || |||||| | | |||||||||||||| ||||||||| Sbjct: 41884 gtttacctctgtggctatcattctcaagattcatatggagcaacttcttatctt 41831 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 488 tgtggttaccattctgagaactcatatggagcaacatcttatcttat 534 |||||||| |||||||| |||| | ||||||||| ||||||||||| Sbjct: 45881 tgtggttatcattctgaagactcgtttggagcaacttcttatcttat 45835 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 acagcccaaggtatacaccgaaact 588 ||||||||||||||||| ||||||| Sbjct: 41539 acagcccaaggtatacaacgaaact 41515
>tpg|BK002382.1| TPA: TPA_inf: Drosophila melanogaster HDC12377 (HDC12377) gene, complete cds Length = 1760 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctca 29 |||||||||||||||| ||||||||| Sbjct: 785 agctcagctcagctcggctcggctca 760
>ref|XM_702967.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 6 (LOC402838), mRNA Length = 3835 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 3211 acaggacatgctccaactgcagaaca 3186
>ref|XM_702966.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 5 (LOC402838), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 3172 acaggacatgctccaactgcagaaca 3147
>ref|XM_702965.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 4 (LOC402838), mRNA Length = 3706 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 3082 acaggacatgctccaactgcagaaca 3057
>ref|XM_702964.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 3 (LOC402838), mRNA Length = 3526 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 2902 acaggacatgctccaactgcagaaca 2877
>ref|XM_702963.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 2 (LOC402838), mRNA Length = 1497 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 873 acaggacatgctccaactgcagaaca 848
>ref|XM_680531.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript variant 1 (LOC402838), mRNA Length = 3883 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 acaggacatgctccaagtgcagaaca 443 |||||||||||||||| ||||||||| Sbjct: 3259 acaggacatgctccaactgcagaaca 3234
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctca 29 |||||||||||||||| ||||||||| Sbjct: 153041 agctcagctcagctcggctcggctca 153016
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete sequence Length = 267607 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctca 29 |||||||||||||||| ||||||||| Sbjct: 229580 agctcagctcagctcggctcggctca 229555
>ref|XM_418230.1| PREDICTED: Gallus gallus similar to hypothetical gene MGC19595 (LOC420112), mRNA Length = 2262 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctc 28 |||||||||||||||| |||||||| Sbjct: 132 agctcagctcagctcggctcggctc 108
>emb|AL929553.6| Mouse DNA sequence from clone RP24-316B1 on chromosome 4 Contains the 5' end of a variant of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 163370 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 actagagacagaaaacttcac 67 ||||||||||||||||||||| Sbjct: 156884 actagagacagaaaacttcac 156904
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ccctcgccgccccgccggctc 128 ||||||||||||||||||||| Sbjct: 1333823 ccctcgccgccccgccggctc 1333803
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 ttcttcgtcgatcaccggtgc 256 ||||||||||||||||||||| Sbjct: 1961780 ttcttcgtcgatcaccggtgc 1961760
>emb|CR354313.1| Gallus gallus finished cDNA, clone ChEST70d4 Length = 2304 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctc 28 |||||||||||||||| |||||||| Sbjct: 137 agctcagctcagctcggctcggctc 113
>gb|AC145978.3| Gallus gallus BAC clone CH261-10K7 from chromosome unknown, complete sequence Length = 216402 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 agctcagctcagctcgcctcggctc 28 |||||||||||||||| |||||||| Sbjct: 36893 agctcagctcagctcggctcggctc 36917
>gb|AC145947.3| Gallus gallus BAC clone CH261-24O5 from chromosome unknown, complete sequence Length = 233033 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 agctcagctcagctcgcctcggctc 28 |||||||||||||||| |||||||| Sbjct: 149809 agctcagctcagctcggctcggctc 149785
>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete sequence Length = 197959 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 caggacatgctccaagtgcagaaca 443 ||||||||||||| ||||||||||| Sbjct: 168660 caggacatgctcccagtgcagaaca 168636
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gtggatggctccggaggtgt 296 |||||||||||||||||||| Sbjct: 573686 gtggatggctccggaggtgt 573705
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 40.1 bits (20), Expect = 8.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 113 gccgccccgccggctca-cctgcgtccgcgcc 143 |||||||||||| |||| |||||||||||||| Sbjct: 82235 gccgccccgccgtctcaacctgcgtccgcgcc 82204
>ref|XM_843002.1| Leishmania major strain Friedlin protein kinase (LMJ_0398) partial mRNA Length = 4557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gtggatggctccggaggtgt 296 |||||||||||||||||||| Sbjct: 2091 gtggatggctccggaggtgt 2110
>ref|XM_533115.2| PREDICTED: Canis familiaris similar to tweety 2 isoform 1 (LOC475908), mRNA Length = 1632 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gtcccctcccccggcgctcg 200 |||||||||||||||||||| Sbjct: 50 gtcccctcccccggcgctcg 31
>gb|AC123041.2| Mus musculus BAC clone RP24-545E4 from 3, complete sequence Length = 191533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cactgcaggccttgctctct 382 |||||||||||||||||||| Sbjct: 99579 cactgcaggccttgctctct 99560
>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence Length = 235814 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 aaggcactgcaggccttgct 378 |||||||||||||||||||| Sbjct: 138920 aaggcactgcaggccttgct 138901
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 acttcttcgtcgatcaccgg 253 |||||||||||||||||||| Sbjct: 302231 acttcttcgtcgatcaccgg 302212
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 306 tcgacggccagtccgccgtggcggcgca 333 |||||| ||||||||||| ||||||||| Sbjct: 191887 tcgacgaccagtccgccggggcggcgca 191914
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08, complete sequence Length = 148860 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccaccacatccctcgccgcc 118 |||||||||||||||||||| Sbjct: 85058 ccaccacatccctcgccgcc 85039
>dbj|AB158483.1| Cyanidioschyzon merolae genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, complete sequence, clone:BAC clone H1D17 Length = 98410 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 254 tgcatcgactgtgccacctgcaggtggatggc 285 ||||||||||||| |||||| |||||||||| Sbjct: 51397 tgcatcgactgtgatacctgccggtggatggc 51428
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccaccacatccctcgccgcc 118 |||||||||||||||||||| Sbjct: 31388250 ccaccacatccctcgccgcc 31388231
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ccctctccccatcgacgatg 467 |||||||||||||||||||| Sbjct: 22777332 ccctctccccatcgacgatg 22777313
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 113 gccgccccgccggctca-cctgcgtccgcgcc 143 |||||||||||| |||| |||||||||||||| Sbjct: 21324763 gccgccccgccgtctcaacctgcgtccgcgcc 21324732
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 gctcagctcagctcgcctcggctc 28 ||||||||||||||| |||||||| Sbjct: 34285383 gctcagctcagctcggctcggctc 34285406
>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702B09 Length = 172541 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 gctcagctcagctcgcctcggctc 28 ||||||||||||||| |||||||| Sbjct: 121069 gctcagctcagctcggctcggctc 121092
>dbj|AK109196.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B09, full insert sequence Length = 627 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccaccacatccctcgccgcc 118 |||||||||||||||||||| Sbjct: 75 ccaccacatccctcgccgcc 94
>dbj|AK072257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H18, full insert sequence Length = 1804 Score = 40.1 bits (20), Expect = 8.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 113 gccgccccgccggctca-cctgcgtccgcgcc 143 |||||||||||| |||| |||||||||||||| Sbjct: 120 gccgccccgccgtctcaacctgcgtccgcgcc 151
>gb|AY105688.1| Zea mays PCO142867 mRNA sequence Length = 1374 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 acctgcaggtggatggctccggag 292 |||| ||||||||||||||||||| Sbjct: 1097 acctacaggtggatggctccggag 1120
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cggccagtccgccgtggcgg 329 |||||||||||||||||||| Sbjct: 336668 cggccagtccgccgtggcgg 336687
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 113 gccgccccgccggctca-cctgcgtccgcgcc 143 |||||||||||| |||| |||||||||||||| Sbjct: 21634962 gccgccccgccgtctcaacctgcgtccgcgcc 21634931
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ccctctccccatcgacgatg 467 |||||||||||||||||||| Sbjct: 22705523 ccctctccccatcgacgatg 22705504
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ccctctccccatcgacgatg 467 |||||||||||||||||||| Sbjct: 89182 ccctctccccatcgacgatg 89163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,353,550 Number of Sequences: 3902068 Number of extensions: 4353550 Number of successful extensions: 88855 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 88403 Number of HSP's gapped (non-prelim): 452 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)