Clone Name | bart40e06 |
---|---|
Clone Library Name | barley_pub |
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = +3 Query: 3 PRPTPTSAKSTAVSRLPAF*NFPSAMDLWERARSFAGEAAKRSQELSLEAAKRSSVLVSE 182 PRP P S KST VS+L + +FP A D ++ + +G+ + + + + + S Sbjct: 787 PRPKPPSGKSTPVSQLGSA-DFPEAPDPFQPLGADSGDPFQSKKGFGDPFSGKDPFVPSS 845 Query: 183 TAKKSK 200 AK SK Sbjct: 846 AAKPSK 851
>IF2_TREDE (Q73NP6) Translation initiation factor IF-2| Length = 896 Score = 31.6 bits (70), Expect = 1.8 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +2 Query: 233 RDGRGGDQAGRPPRRPDHAPRLGHPRP 313 R G+GG Q GRP RP + P G PRP Sbjct: 212 RTGQGGQQ-GRPGDRPQNRPGFGGPRP 237
>LEA3_MAIZE (Q42376) Late embryogenesis abundant protein, group 3 (LEA)| Length = 221 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = +3 Query: 114 EAAKRSQELSLEAAKRSSVLVSETAKKSKEIFSETAIKSREMAAEATKQADLLAGQ 281 EAAK+ + EAAK+ + +ET K+ +E A + A EA KQ AGQ Sbjct: 97 EAAKQKAGETTEAAKQKAGETTETTKQKAGETTEAARQKAADAMEAAKQKAAEAGQ 152
>ABP1_HUMAN (P19801) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) (Kidney amine oxidase) (KAO) Length = 751 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +2 Query: 239 GRGGDQAGRPPRRPDHAPRLGHPRPLHPAHPR 334 G+G D PP H PR P P+H + PR Sbjct: 270 GKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPR 301
>FLIH_BORBU (P52611) Flagellar assembly protein fliH| Length = 306 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +3 Query: 135 ELSLEAAKRSSVLVSETAKKSKEIFSETAIKSREMAAEATKQADLLAGQIMH 290 +L E AKR + E +SK + E K+ E+ A ++ADLL + ++ Sbjct: 62 QLEEELAKRQELAKEEVQIESKRLIEEAKAKANEVLEAAKQEADLLQKEAIY 113
>B3A2_HUMAN (P04920) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (BND3L) Length = 1241 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 218 RHQVPRDGRGGDQAGRPPRRPDHAPRLGHPRPLHPAH 328 RH V ++ +G Q+GR R P PR PR H H Sbjct: 286 RHLVRKNAKGSTQSGREGREPGPTPR-ARPRAPHKPH 321
>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 29.6 bits (65), Expect = 6.8 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +2 Query: 218 RHQVPRDGRGGDQAGRPPRRPDHAPRLGHPRPLHPAH 328 RH V ++ +G QA R R P PR PR H H Sbjct: 282 RHLVRKNAKGSTQAAREGREPGPTPR-ARPRAPHKPH 317
>B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1234 Score = 29.6 bits (65), Expect = 6.8 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +2 Query: 218 RHQVPRDGRGGDQAGRPPRRPDHAPRLGHPRPLHPAH 328 RH V ++ +G QA R R P PR PR H H Sbjct: 283 RHLVRKNAKGSTQAAREGREPGPTPR-ARPRAPHKPH 318
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 8.9 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 212 GDRHQVPRDGRGGDQAGRPPRRPDHAPRLGHPRP 313 G R PRDG+GG + RP P G PRP Sbjct: 225 GQRSGAPRDGQGGPRGQRP------GPGSGGPRP 252
>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 455 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/37 (35%), Positives = 15/37 (40%) Frame = +2 Query: 212 GDRHQVPRDGRGGDQAGRPPRRPDHAPRLGHPRPLHP 322 G + PRD G + P RP PR PR P Sbjct: 49 GKMQRAPRDSDAGREGQEPQPRPQDEPRAQQPRAQEP 85
>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2| (Retina-derived POU-domain factor 1) (RPF-1) Length = 684 Score = 29.3 bits (64), Expect = 8.9 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 254 QAGRPPRRPDHAPRLGHPRPLHPAHP 331 Q+ PP++P +P G P PL P +P Sbjct: 261 QSSSPPQKPSQSPGHGLPSPLTPPNP 286
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = +2 Query: 218 RHQVPRDGRGGDQAGRPPRRPDHAPRLGHP------RPLHPAHPRD 337 RH P G+ AG P +P+ LG P +P PA P+D Sbjct: 992 RHHEPGPGQLTKSAGPTPEKPEEEATLGDPQLPAETKPPTPAPPKD 1037 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,582,923 Number of Sequences: 219361 Number of extensions: 711309 Number of successful extensions: 3337 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3329 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)