Clone Name | bart40e04 |
---|---|
Clone Library Name | barley_pub |
>MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 229 Score = 37.0 bits (84), Expect = 0.045 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = +3 Query: 333 GKDPLLGVDSVGTVSAALVTYASIQLLKPDLIINXXXXXXXXXXXXXXXDVFLASDVAFH 512 GKD L +G V+AA+ T A +QL KPD +IN D+ ++ + +H Sbjct: 40 GKDVALLQSGIGKVAAAIGTTALLQLAKPDCVIN-TGSAGGVAKGLKVGDIVISDETRYH 98 Query: 513 D 515 D Sbjct: 99 D 99
>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 34.7 bits (78), Expect = 0.23 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = +3 Query: 294 GEYKGLHIDLVWPGKDPLLGVDSVGTVSAALVTYASIQLLKPDLIINXXXXXXXXXXXXX 473 GEY+G + L+ G +G V+AA+ T + KPD +IN Sbjct: 36 GEYEGTEVILLKSG---------IGKVNAAISTTLLLDRYKPDYVIN-TGSAGGFHHTLN 85 Query: 474 XXDVFLASDVAFHDRRIPIPVFD-SYG 551 DV +++DV HD + + FD YG Sbjct: 86 VGDVVISTDVRHHD--VDVTAFDYEYG 110
>MTNN_BUCAP (O51931) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 235 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +3 Query: 288 YHGEYKGLHIDLVWPGKDPLLGVDSVGTVSAALVTYASIQLLKPDLIIN 434 Y G +K + I L+ G +G VSA++ T SI L +PD IIN Sbjct: 34 YTGTFKKIEIFLILSG---------IGKVSASMSTTISINLFQPDFIIN 73
>YDH3_PLAFS (P14589) Hypothetical protein 3' to Asp-rich and His-rich proteins| (Fragment) Length = 53 Score = 30.4 bits (67), Expect = 4.2 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 434 RWYCWRFQGQRSRYW 478 RW+CWR +G R R+W Sbjct: 12 RWWCWRRRGWRRRWW 26
>MTNN_BUCAI (P57306) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/87 (27%), Positives = 37/87 (42%) Frame = +3 Query: 174 VLVVIAMQTEALPLVTRFQLVEAAADESIFPKGAPWTRYHGEYKGLHIDLVWPGKDPLLG 353 ++ I +TE L + F + + I Y G++K + L+ G Sbjct: 5 IIGAINQETERLKKIIHFYIEKKINTYKI---------YIGKFKSHDVFLIKSG------ 49 Query: 354 VDSVGTVSAALVTYASIQLLKPDLIIN 434 +G VSA++ T I L KPD IIN Sbjct: 50 ---IGKVSASVATMILIDLYKPDTIIN 73
>SYL_CAUCR (Q9A217) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 861 Score = 29.3 bits (64), Expect = 9.5 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 183 VIAMQTEALPLVTRF--QLVEAAADESIFPKGAPWTRYHGEYKGLHIDLVWPGKDPLLGV 356 V+A + EAL ++ R A+E+ W R GE G+ +D WP DP L Sbjct: 747 VLAARAEALNILARLVAPFTPHLAEEA-------WARMGGE--GMVVDAPWPKADPALAA 797 Query: 357 D 359 D Sbjct: 798 D 798 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,377,793 Number of Sequences: 219361 Number of extensions: 1398097 Number of successful extensions: 4412 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4410 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)