ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476027.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 160 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 219 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 220 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 279 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 280 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 339 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 340 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 399 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 400 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 459 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 460 ttcgtctactacgccgaccacggcggccc 488
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 8113 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 8054 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 8053 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 7994 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 7993 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 7934 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 7933 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 7874 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 7873 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 7814 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 7813 ttcgtctactacgccgaccacggcggccc 7785
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 138745 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 138686 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 138685 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 138626 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 138625 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 138566 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 138565 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 138506 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 138505 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 138446 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 138445 ttcgtctactacgccgaccacggcggccc 138417
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03, complete sequence Length = 45160 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 33177 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 33236 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 33237 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 33296 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 33297 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 33356 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 33357 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 33416 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 33417 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 33476 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 33477 ttcgtctactacgccgaccacggcggccc 33505
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Minus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 29360088 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 29360029 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 29360028 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 29359969 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 29359968 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 29359909 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 29359908 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 29359849 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 29359848 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 29359789 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 29359788 ttcgtctactacgccgaccacggcggccc 29359760 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 22064040 cccctcctcctcctcctcgtc 22064020 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 25074146 ccctcctcctcctcctcgtc 25074165 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtct 91 |||||||||||||||||||| Sbjct: 20012259 cctcctcctcctcctcgtct 20012240 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 13396192 ccctcctcctcctcctcgtc 13396211 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 917784 cacccctcctcctcctcctc 917803 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgt 89 |||||||||||||||||||| Sbjct: 541005 cccctcctcctcctcctcgt 541024 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 421513 ccctcctcctcctcctcgtc 421494
>dbj|AK058553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C11, full insert sequence Length = 1522 Score = 240 bits (121), Expect = 4e-60 Identities = 277/329 (84%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 160 aactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtg 219 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaacccc 324 |||| | |||||| | || | ||||||||||||||||| |||||| |||||||||| Sbjct: 220 gaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaacccc 279 Query: 325 aggcccggggtcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaag 384 ||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 280 aggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaag 339 Query: 385 gactacacgggggcggacgtgaacaccaacaacttcctcgccgccctgctcggcgacaag 444 || ||||| || | ||||| ||| ||||||||||||||||| ||| |||||| || Sbjct: 340 gattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgc 399 Query: 445 tccaagctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatc 504 ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || Sbjct: 400 tccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtc 459 Query: 505 ttcgtctactacgccgatcacggcggccc 533 ||||||||||||||||| ||||||||||| Sbjct: 460 ttcgtctactacgccgaccacggcggccc 488
>ref|NM_193501.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1506 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 169 tgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccaggcggacgtg 228 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 196 tgggccgtcctcatcgccggctccaacggctactacaactaccgccaccaggcggatgtc 255 Query: 229 tgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacatcatcgtcttc 288 ||||| || |||||||||||||||| ||||||| | ||||| |||||||||||||||||| Sbjct: 256 tgccatgcctaccagatcatgaagaggggcgggctcaaggacgagaacatcatcgtcttc 315 Query: 289 atgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtcatcatcaaccac 348 |||||||| |||||||| |||||| || || || ||||| || |||||||||||||| Sbjct: 316 atgtacgatgacatcgcgcacaacccggagaatccgaggcctggtgtcatcatcaaccat 375 Query: 349 cccaaaggcggcgacgtctacgccggagtccccaaggactacac 392 ||| | || ||||| ||||| || || ||||| ||||| ||||| Sbjct: 376 ccccagggtggcgatgtctatgctggggtcccgaaggattacac 419
>dbj|AK067597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L21, full insert sequence Length = 1938 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 169 tgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccaggcggacgtg 228 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 308 tgggccgtcctcatcgccggctccaacggctactacaactaccgccaccaggcggatgtc 367 Query: 229 tgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacatcatcgtcttc 288 ||||| || |||||||||||||||| ||||||| | ||||| |||||||||||||||||| Sbjct: 368 tgccatgcctaccagatcatgaagaggggcgggctcaaggacgagaacatcatcgtcttc 427 Query: 289 atgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtcatcatcaaccac 348 |||||||| |||||||| |||||| || || || ||||| || |||||||||||||| Sbjct: 428 atgtacgatgacatcgcgcacaacccggagaatccgaggcctggtgtcatcatcaaccat 487 Query: 349 cccaaaggcggcgacgtctacgccggagtccccaaggactacac 392 ||| | || ||||| ||||| || || ||||| ||||| ||||| Sbjct: 488 ccccagggtggcgatgtctatgctggggtcccgaaggattacac 531
>dbj|AB025310.1| Oryza sativa mRNA for asparaginyl endopeptidase, complete cds Length = 1866 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 169 tgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccaggcggacgtg 228 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 212 tgggccgtcctcatcgccggctccaacggctactacaactaccgccaccaggcggatgtc 271 Query: 229 tgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacatcatcgtcttc 288 ||||| || |||||||||||||||| ||||||| | ||||| |||||||||||||||||| Sbjct: 272 tgccatgcctaccagatcatgaagaggggcgggctcaaggacgagaacatcatcgtcttc 331 Query: 289 atgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtcatcatcaaccac 348 |||||||| |||||||| |||||| || || || ||||| || |||||||||||||| Sbjct: 332 atgtacgatgacatcgcgcacaacccggagaatccgaggcctggtgtcatcatcaaccat 391 Query: 349 cccaaaggcggcgacgtctacgccggagtccccaaggactacac 392 ||| | || ||||| ||||| || || ||||| ||||| ||||| Sbjct: 392 ccccagggtggcgatgtctatgctggggtcccgaaggattacac 435
>emb|AJ131718.1|ZMA131718 Zea mays mRNA for legumain-like protease (see2a) Length = 1569 Score = 176 bits (89), Expect = 5e-41 Identities = 203/241 (84%) Strand = Plus / Plus Query: 156 cgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtca 215 ||||||||| | ||||| || |||||||| ||||||| |||||||||||||||||| || Sbjct: 181 cgtcgggacccgctgggctgtgctcatcgcaggctccagcggctactacaactaccgcca 240 Query: 216 ccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaa 275 |||||||||| | ||||| || ||||||||||||||||||||||| | ||||||||||| Sbjct: 241 ccaggcggacatctgccatgcataccagatcatgaagaagggcggactcaaggatgagaa 300 Query: 276 catcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggt 335 |||||| |||||||||||||| |||||||| | | || || || || ||||| || || Sbjct: 301 catcattgtcttcatgtacgatgacatcgcgcatagcccggagaatccgaggcctggtgt 360 Query: 336 catcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaaggactacacggg 395 |||||||||||| ||| | || ||||||||||| || || || || ||||| |||||||| Sbjct: 361 catcatcaaccatccccagggtggcgacgtctatgctggggtgccaaaggattacacggg 420 Query: 396 g 396 | Sbjct: 421 g 421
>emb|AJ131719.1|ZMA131719 Zea mays mRNA for legumain-like protease (see2a) Length = 1864 Score = 172 bits (87), Expect = 8e-40 Identities = 138/155 (89%) Strand = Plus / Plus Query: 151 gacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactac 210 |||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 162 gacgccgtcgggacccggtgggccgtgctcatcgccggctccaacggctactacaactac 221 Query: 211 cgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggat 270 || |||||||||||| | ||||| || ||||||||||||||||||||||| | ||||| Sbjct: 222 cgccaccaggcggacatctgccatgcataccagatcatgaagaagggcggacttaaggac 281 Query: 271 gagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||||||| | |||||||||||||| |||||||| Sbjct: 282 gagaacatcgttgtcttcatgtacgatgacatcgc 316
>gb|AY104034.1| Zea mays PCO131778 mRNA sequence Length = 1981 Score = 172 bits (87), Expect = 8e-40 Identities = 138/155 (89%) Strand = Plus / Plus Query: 151 gacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactac 210 |||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 200 gacgccgtcgggacccggtgggccgtgctcatcgccggctccaacggctactacaactac 259 Query: 211 cgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggat 270 || |||||||||||| | ||||| || ||||||||||||||||||||||| | ||||| Sbjct: 260 cgccaccaggcggacatctgccatgcataccagatcatgaagaagggcggacttaaggac 319 Query: 271 gagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||||||| | |||||||||||||| |||||||| Sbjct: 320 gagaacatcgttgtcttcatgtacgatgacatcgc 354
>gb|AF082347.1|AF082347 Zea mays C13 endopeptidase NP1 precursor, mRNA, complete cds Length = 1919 Score = 165 bits (83), Expect = 2e-37 Identities = 137/155 (88%) Strand = Plus / Plus Query: 151 gacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactac 210 |||| ||||||||| | |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 197 gacgccgtcgggacccggtgggccgtgctcatcgccggctccaacggctactataactac 256 Query: 211 cgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggat 270 || |||||||||||| | ||||| || ||||||||||||||||||||||| | ||||| Sbjct: 257 cgccaccaggcggacatctgccatgcataccagatcatgaagaagggcggacttaaggac 316 Query: 271 gagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||||||| | |||||||||||||| |||||||| Sbjct: 317 gagaacatcgttgtcttcatgtacgatgacatcgc 351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 3e-24 Identities = 142/169 (84%) Strand = Plus / Plus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 |||||||| || ||||| || |||||||||||||||| ||||||| | ||||| |||||| Sbjct: 21227620 caggcggatgtctgccatgcctaccagatcatgaagaggggcgggctcaaggacgagaac 21227679 Query: 277 atcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtc 336 |||||||||||||||||||| |||||||| |||||| || || || ||||| || ||| Sbjct: 21227680 atcatcgtcttcatgtacgatgacatcgcgcacaacccggagaatccgaggcctggtgtc 21227739 Query: 337 atcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaagg 385 ||||||||||| ||| | || ||||| ||||| || || ||||| |||| Sbjct: 21227740 atcatcaaccatccccagggtggcgatgtctatgctggggtcccgaagg 21227788 Score = 95.6 bits (48), Expect = 1e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 169 tgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccagg 220 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 21226807 tgggccgtcctcatcgccggctccaacggctactacaactaccgccaccagg 21226858 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 25298314 cccctcctcctcctcctcgtc 25298294 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 42182966 ccctcctcctcctcctcgtc 42182985 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtct 91 |||||||||||||||||||| Sbjct: 38803814 cctcctcctcctcctcgtct 38803795 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 38649576 ccctcctcctcctcctcgtc 38649595 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 32343938 ccctcctcctcctcctcgtc 32343919 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 27718975 ccctcctcctcctcctcgtc 27718956 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtct 91 |||||||||||||||||||| Sbjct: 18964903 cctcctcctcctcctcgtct 18964884
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 121 bits (61), Expect = 3e-24 Identities = 142/169 (84%) Strand = Plus / Plus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 |||||||| || ||||| || |||||||||||||||| ||||||| | ||||| |||||| Sbjct: 125129 caggcggatgtctgccatgcctaccagatcatgaagaggggcgggctcaaggacgagaac 125188 Query: 277 atcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtc 336 |||||||||||||||||||| |||||||| |||||| || || || ||||| || ||| Sbjct: 125189 atcatcgtcttcatgtacgatgacatcgcgcacaacccggagaatccgaggcctggtgtc 125248 Query: 337 atcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaagg 385 ||||||||||| ||| | || ||||| ||||| || || ||||| |||| Sbjct: 125249 atcatcaaccatccccagggtggcgatgtctatgctggggtcccgaagg 125297 Score = 95.6 bits (48), Expect = 1e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 169 tgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccagg 220 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124316 tgggccgtcctcatcgccggctccaacggctactacaactaccgccaccagg 124367
>emb|AJ251453.1|ZMA251453 Zea mays see2a gene for putative legumain, exons 1-9 Length = 6914 Score = 103 bits (52), Expect = 6e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 ||||||||| | ||||| || ||||||||||||||||||||||| | |||||||||||| Sbjct: 3445 caggcggacatctgccatgcataccagatcatgaagaagggcggactcaaggatgagaac 3504 Query: 277 atcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtc 336 ||||| ||||| |||||||| |||||||| | | || || || || ||||| || ||| Sbjct: 3505 atcattgtctttatgtacgatgacatcgcgcatagcccggagaatccgaggcctggtgtc 3564 Query: 337 atcatcaaccaccccaaaggcggcgacgtcta 368 ||||||||||| ||| | || ||||||||||| Sbjct: 3565 atcatcaaccatccccagggtggcgacgtcta 3596 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 156 cgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtca 215 ||||||||| | ||||| || |||||||||||||||| |||||||||||||||||| || Sbjct: 138 cgtcgggacccgctgggctgtgctcatcgccggctccagcggctactacaactaccgcca 197 Query: 216 ccagg 220 ||||| Sbjct: 198 ccagg 202
>ref|NM_185324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || | Sbjct: 160 aactaccgtcaccaggcagacgtgtgccacgcgtaccagataatgaagaagggaggactc 219 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||| |||||||| | || | ||||||||||||||||| Sbjct: 220 aaggaccagaacatcgtggttatgatgtacgacgacatcgc 260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Plus Query: 362 acgtctacgccggagtccccaaggactacacgggggcggacgtgaacaccaacaacttcc 421 |||||||||| |||||||| ||||| |||| ||| |||||||| | |||||||||| Sbjct: 317 acgtctacgctggagtcccaaaggattacaatgggaatgacgtgaataagaacaacttcc 376 Query: 422 tcgccgccctgctcggcgacaagtccaagctcaccggcagcggcagcggcaaggtcgtca 481 | |||| |||| ||| | ||||| ||||||||| |||||||||||||||| ||| Sbjct: 377 tggccgtgttgctgggcaagaagtcggctctcaccggcgccggcagcggcaaggtcatca 436 Query: 482 gcagcggcccggacgaccacatcttcgtctactacgccgatcacggcggccc 533 |||||||||| ||||||| ||||||||||| ||| | ||||| ||| |||| Sbjct: 437 gcagcggccccaacgaccatatcttcgtctattactcagatcatggcagccc 488
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || | Sbjct: 358828 aactaccgtcaccaggcagacgtgtgccacgcgtaccagataatgaagaagggaggactc 358887 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||| |||||||| | || | ||||||||||||||||| Sbjct: 358888 aaggaccagaacatcgtggttatgatgtacgacgacatcgc 358928 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 451 ctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatcttcgtc 510 ||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 359524 ctcaccggcgccggcagcggcaaggtcatcagcagcggccccaacgaccatatcttcgtc 359583 Query: 511 tactacgccgatcacggcggccc 533 || ||| | ||||| ||| |||| Sbjct: 359584 tattactcagatcatggcagccc 359606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 26248396 cccctcctcctcctcctcgtc 26248416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtct 91 ||||||||||||||||||||| Sbjct: 3266277 ccctcctcctcctcctcgtct 3266257 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1466881 cctcctcctcctcctcgtctt 1466901 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 27029502 ccctcctcctcctcctcgtc 27029483
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || | Sbjct: 68781 aactaccgtcaccaggcagacgtgtgccacgcgtaccagataatgaagaagggaggactc 68840 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacatcgc 305 ||||| |||||||| | || | ||||||||||||||||| Sbjct: 68841 aaggaccagaacatcgtggttatgatgtacgacgacatcgc 68881 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 451 ctcaccggcagcggcagcggcaaggtcgtcagcagcggcccggacgaccacatcttcgtc 510 ||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 69477 ctcaccggcgccggcagcggcaaggtcatcagcagcggccccaacgaccatatcttcgtc 69536 Query: 511 tactacgccgatcacggcggccc 533 || ||| | ||||| ||| |||| Sbjct: 69537 tattactcagatcatggcagccc 69559
>gb|AF082346.1|AF082346 Hordeum vulgare C13 endopeptidase NP1 precursor, mRNA, partial cds Length = 1485 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 226 gtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacatcatcgtc 285 ||||||||||||||||||||| |||||||||| || | |||||||||||||| | || Sbjct: 5 gtgtgccacgcgtaccagatcctgaagaagggaggcctcaaggatgagaacattgtggtg 64 Query: 286 ttcatgtacgacgacatcgctaacaaccgcgacaaccccaggcccggggtcatcatcaac 345 ||||||||||| || ||||| |||| || |||||||| ||||| || || |||||||| Sbjct: 65 ttcatgtacgatgatatcgccaacagccctgacaacccaaggcctggaatcgtcatcaac 124 Query: 346 caccccaaaggc 357 || ||||||||| Sbjct: 125 catcccaaaggc 136
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 166 agatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccagg 220 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544207 agatgggccgtcctcatcgccggctccaacggctactacaagtaccgccaccagg 2544261 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 17980679 cctcctcctcctcctcgtctt 17980699 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcctcctcgtctt 92 |||||||||||||||||||| Sbjct: 24237099 ctcctcctcctcctcgtctt 24237080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 21242884 cacccctcctcctcctcctc 21242865 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 agctcaccggcagcggcagc 468 |||||||||||||||||||| Sbjct: 11095234 agctcaccggcagcggcagc 11095215 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 3735435 cacccctcctcctcctcctc 3735454
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 166 agatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccagg 220 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544151 agatgggccgtcctcatcgccggctccaacggctactacaagtaccgccaccagg 2544205 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 17907000 cctcctcctcctcctcgtctt 17907020 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcctcctcgtctt 92 |||||||||||||||||||| Sbjct: 24165305 ctcctcctcctcctcgtctt 24165286 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 21169093 cacccctcctcctcctcctc 21169074 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 agctcaccggcagcggcagc 468 |||||||||||||||||||| Sbjct: 11094933 agctcaccggcagcggcagc 11094914 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 3735409 cacccctcctcctcctcctc 3735428
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 166 agatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccagg 220 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 123802 agatgggccgtcctcatcgccggctccaacggctactacaagtaccgccaccagg 123748
>emb|AJ251454.1|ZMA251454 Zea mays see2b gene for putative legumain, exons 1-9 Length = 8994 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 151 gacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactacaactac 210 |||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130 gacgccgtcgggacccggtgggccgtgctcatcgccggctccaacggctactacaactac 189 Query: 211 cgtcaccagg 220 || ||||||| Sbjct: 190 cgccaccagg 199 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 ||||||||| | ||||| || ||||||||||||||||||||||| | ||||| |||||| Sbjct: 1656 caggcggacatctgccatgcataccagatcatgaagaagggcggacttaaggacgagaac 1715 Query: 277 atcatcgtcttcatgtacgacgacatcgc 305 ||| | |||||||||||||| |||||||| Sbjct: 1716 atcgttgtcttcatgtacgatgacatcgc 1744
>ref|XM_473335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 160 gggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccag 219 |||||||| ||||| || ||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 178 gggacgaggtgggcggtgctcgtcgccggctcctccggctacgggaactaccggcaccag 237 Query: 220 gcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacat 278 || || |||||||| ||||||||||| || ||||||| || ||||||| |||||||| Sbjct: 238 gccgatgtgtgccatgcgtaccagattctgcagaagggaggagtgaaggaggagaacat 296
>dbj|AK103573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132N22, full insert sequence Length = 1858 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 160 gggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccag 219 |||||||| ||||| || ||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 234 gggacgaggtgggcggtgctcgtcgccggctcctccggctacgggaactaccggcaccag 293 Query: 220 gcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacat 278 || || |||||||| ||||||||||| || ||||||| || ||||||| |||||||| Sbjct: 294 gccgatgtgtgccatgcgtaccagattctgcagaagggaggagtgaaggaggagaacat 352
>dbj|AB109637.1| Oryza sativa (japonica cultivar-group) Glup3 mRNA for vacuolar processing enzyme, complete cds Length = 1494 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 160 gggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccag 219 |||||||| ||||| || ||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 178 gggacgaggtgggcggtgctcgtcgccggctcctccggctacgggaactaccggcaccag 237 Query: 220 gcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaacat 278 || || |||||||| ||||||||||| || ||||||| || ||||||| |||||||| Sbjct: 238 gccgatgtgtgccatgcgtaccagattctgcagaagggaggagtgaaggaggagaacat 296
>ref|XM_467011.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1889 Score = 60.0 bits (30), Expect = 8e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactac 204 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 374 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctacggt 433 Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||| | |||||||| || || ||||| || |||||||| | |||||| ||| | Sbjct: 434 aactacaggcaccaggctgatgtatgccatgcataccagatattacggaagggagggcta 493 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacat 302 ||||| |||||||| |||| || ||||| |||||||| Sbjct: 494 aaggaggagaacattgtcgtgtttatgtatgacgacat 531
>gb|AY062178.1| Oryza sativa subsp. indica C13 cysteine proteinase precursor (NP1) mRNA, complete cds Length = 1642 Score = 60.0 bits (30), Expect = 8e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactac 204 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 115 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctacggt 174 Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||| | |||||||| || || ||||| || |||||||| | |||||| ||| | Sbjct: 175 aactacaggcaccaggctgatgtatgccatgcataccagatattacggaagggagggcta 234 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacat 302 ||||| |||||||| |||| || ||||| |||||||| Sbjct: 235 aaggaggagaacattgtcgtgtttatgtatgacgacat 272
>dbj|AK101360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035H01, full insert sequence Length = 1888 Score = 60.0 bits (30), Expect = 8e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactac 204 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 373 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctacggt 432 Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||| | |||||||| || || ||||| || |||||||| | |||||| ||| | Sbjct: 433 aactacaggcaccaggctgatgtatgccatgcataccagatattacggaagggagggcta 492 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacat 302 ||||| |||||||| |||| || ||||| |||||||| Sbjct: 493 aaggaggagaacattgtcgtgtttatgtatgacgacat 530
>dbj|AB081464.1| Oryza sativa (japonica cultivar-group) mRNA for asparaginyl endopeptidase REP-2, complete cds Length = 1682 Score = 60.0 bits (30), Expect = 8e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctactac 204 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 163 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctacggt 222 Query: 205 aactaccgtcaccaggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttg 264 |||||| | |||||||| || || ||||| || |||||||| | |||||| ||| | Sbjct: 223 aactacaggcaccaggctgatgtatgccatgcataccagatattacggaagggagggcta 282 Query: 265 aaggatgagaacatcatcgtcttcatgtacgacgacat 302 ||||| |||||||| |||| || ||||| |||||||| Sbjct: 283 aaggaggagaacattgtcgtgtttatgtatgacgacat 320
>ref|XM_421328.1| PREDICTED: Gallus gallus similar to legumain (LOC423418), mRNA Length = 2047 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 202 tacaactaccgtcaccaggcggacgtgtgccacgcgtaccagat 245 ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 190 tacaactaccgccaccaggcagatgtgtgccacgcataccagat 233
>emb|CR728066.2|CNS0GOQ0 Tetraodon nigroviridis full-length cDNA Length = 1687 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 182 tcgccggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtacc 241 ||||||||||||| |||| ||||||||| | |||||||| |||| |||||||| |||| Sbjct: 125 tcgccggctccaatggctggtacaactacagacaccaggccgacgcctgccacgcctacc 184 Query: 242 agat 245 |||| Sbjct: 185 agat 188
>emb|CR725469.2|CNS0GMPV Tetraodon nigroviridis full-length cDNA Length = 1699 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 182 tcgccggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtacc 241 ||||||||||||| |||| ||||||||| | |||||||| |||| |||||||| |||| Sbjct: 126 tcgccggctccaatggctggtacaactacagacaccaggccgacgcctgccacgcctacc 185 Query: 242 agat 245 |||| Sbjct: 186 agat 189
>emb|CR724635.2|CNS0GM2P Tetraodon nigroviridis full-length cDNA Length = 1696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 182 tcgccggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtacc 241 ||||||||||||| |||| ||||||||| | |||||||| |||| |||||||| |||| Sbjct: 124 tcgccggctccaatggctggtacaactacagacaccaggccgacgcctgccacgcctacc 183 Query: 242 agat 245 |||| Sbjct: 184 agat 187
>emb|AL807833.5| Mouse DNA sequence from clone RP23-371E13 on chromosome 4, complete sequence Length = 188795 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 57 ccttccctgctcacccctcctcctcct 83 ||||||||||||||||||||||||||| Sbjct: 161081 ccttccctgctcacccctcctcctcct 161107
>gb|AY961423.1| Phytophthora infestans clone PF015D5 cysteine protease mRNA, complete cds Length = 1662 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 185 ccggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtacca 242 ||||||||||||| ||| ||||||||| |||||| |||||| |||||||| ||||| Sbjct: 115 ccggctccaacggatacagcaactaccggcaccagtcggacgcttgccacgcctacca 172
>gb|AY584752.1| Ixodes ricinus legumain-like protease precursor mRNA, complete cds Length = 1461 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 335 tcatcatcaaccaccccaaaggcggcgacgtctacgccggagtccccaaggactacacgg 394 ||||||||||||||| || ||| | |||| ||||| ||||| |||||||||||||||| Sbjct: 300 tcatcatcaaccacctgaacggctccaacgtttacgcaggagtgcccaaggactacacgg 359 Query: 395 g 395 | Sbjct: 360 g 360
>emb|AJ617489.1| Nicotiana tabacum partial mRNA for putative legumain (pb3 gene) Length = 1500 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 268 gatgagaacatcatcgtcttcatgtacgacgacatcgctaacaaccgcgacaaccccagg 327 ||||| ||||||||||| ||||||||||| || || |||||||| | || |||||||| Sbjct: 121 gatgaaaacatcatcgtattcatgtacgatgatattgctaacaatagagagaaccccaga 180 Query: 328 cccggggtcatcatcaa 344 || || ||||| ||||| Sbjct: 181 cctggagtcattatcaa 197
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctac 201 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 25913328 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctac 25913272 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 23117874 tcacccctcctcctcctcctc 23117854 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 35856178 cacccctcctcctcctcctc 35856159 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 27762834 cacccctcctcctcctcctc 27762815 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 23662765 cacccctcctcctcctcctc 23662746 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 22434778 cacccctcctcctcctcctc 22434797 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 14660047 cacccctcctcctcctcctc 14660028 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 ctgctcacccctcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 10196572 ctgctcactcctcctcctcctcct 10196549 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtct 91 |||||||||||||||||||| Sbjct: 2799073 cctcctcctcctcctcgtct 2799054
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctac 201 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 64669 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctac 64613
>dbj|AB081465.1| Oryza sativa (japonica cultivar-group) gene for asparaginyl endopeptidase REP-2, complete cds Length = 4532 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 145 gagaaggacgtcgtcgggacgagatgggccgtcctcatcgccggctccaacggctac 201 |||||||||| |||||||||||| ||||| || ||| |||| |||||| ||||||| Sbjct: 163 gagaaggacggcgtcgggacgaggtgggcggtgctcgtcgcgggctcctccggctac 219
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 64 tgctcacccctcctcctcctcctc 87 |||||||||||||||||||||||| Sbjct: 43249 tgctcacccctcctcctcctcctc 43226
>emb|AJ238880.2|NTA238880 Nicotiana tabacum partial mRNA for putative preprolegumain (lenE1 gene), clone TPE8 Length = 1644 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 268 gatgagaacatcatcgtcttcatgtacgacga 299 ||||| ||||||||||| |||||||||||||| Sbjct: 262 gatgaaaacatcatcgtattcatgtacgacga 293
>ref|XM_323868.1| Neurospora crassa OR74A predicted protein (NCU04516.1) partial mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtcttgt 94 ||||||||||||||||||||||| Sbjct: 286 cctcctcctcctcctcgtcttgt 264
>ref|XM_951834.1| Neurospora crassa OR74A hypothetical protein (NCU04516.1) partial mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtcttgt 94 ||||||||||||||||||||||| Sbjct: 286 cctcctcctcctcctcgtcttgt 264
>ref|NM_001031181.1| Gallus gallus WEE1 homolog (S. pombe) (WEE1), mRNA Length = 3331 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtctt 92 |||||||||||||||||||||| Sbjct: 316 ccctcctcctcctcctcgtctt 295
>gb|AC087841.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-415I19, complete sequence Length = 198053 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 39475 ctcacccctcctcctcctcctc 39496
>gb|AY386694.1| Oryctolagus cuniculus clone 38A2, complete sequence Length = 128059 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 124307 ctcacccctcctcctcctcctc 124286 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 83560 ctcacccctcctcctcctcctc 83539
>gb|AY550476.1| Salmo salar clone Hae380 microsatellite sequence Length = 543 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 333 ctcacccctcctcctcctcctc 312
>gb|AC161221.7| Mus musculus chromosome 1, clone RP24-228M19, complete sequence Length = 164548 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 108400 ctcacccctcctcctcctcctc 108421
>ref|XM_776356.1| PREDICTED: Strongylocentrotus purpuratus similar to thyroid hormone receptor interactor 12 (LOC576002), partial mRNA Length = 2763 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ctgctcacccctcctcctcctcctcg 88 ||||| |||||||||||||||||||| Sbjct: 203 ctgctgacccctcctcctcctcctcg 228
>emb|AL035405.13|HS21O18 Human DNA sequence from clone RP1-21O18 on chromosome 1p35.1-36.23 Contains the 3' end of a novel gene (KIAA1026), gene FLJ23703, a novel pseudogene, the 5' end of a novel gene (FLJ10199), a novel gene and a CpG island, complete sequence Length = 168853 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 cttccctgctcacccctcctcc 79 |||||||||||||||||||||| Sbjct: 135099 cttccctgctcacccctcctcc 135078
>ref|XM_786880.1| PREDICTED: Strongylocentrotus purpuratus similar to myosin, heavy polypeptide 13, skeletal muscle (LOC587129), mRNA Length = 1894 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 1815 ctcacccctcctcctcctcctc 1836
>ref|XM_778502.1| PREDICTED: Strongylocentrotus purpuratus similar to thyroid hormone receptor interactor 12 (LOC578329), mRNA Length = 6602 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ctgctcacccctcctcctcctcctcg 88 ||||| |||||||||||||||||||| Sbjct: 3403 ctgctgacccctcctcctcctcctcg 3428
>emb|BX927148.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 1/10 Length = 348071 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gctcgccctgctcgtcgccggc 123 |||||||||||||||||||||| Sbjct: 171903 gctcgccctgctcgtcgccggc 171882
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 cctcgccgccctgctcggcgac 441 |||||||||||||||||||||| Sbjct: 267613 cctcgccgccctgctcggcgac 267592
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 cctcgccgccctgctcggcgac 441 |||||||||||||||||||||| Sbjct: 232409 cctcgccgccctgctcggcgac 232388
>emb|AL669837.3| Mouse DNA sequence from clone RP23-219P13 on chromosome 11 Contains the Hus1 gene for Hus1 homolog (S. pombe), the gene for a novel protein similar to sperm associated antigen 4 (Spag4), a novel gene and a CpG island, complete sequence Length = 113836 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 3295 ctcacccctcctcctcctcctc 3274
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 ||||| || |||||||| ||||||||||| || ||||||| || ||||||| |||||| Sbjct: 102147 caggccgatgtgtgccatgcgtaccagattctgcagaagggaggagtgaaggaggagaac 102088 Query: 277 at 278 || Sbjct: 102087 at 102086 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 160 gggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccag 219 |||||||| ||||| || ||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 102936 gggacgaggtgggcggtgctcgtcgccggctcctccggctacgggaactaccggcaccag 102877 Query: 220 g 220 | Sbjct: 102876 g 102876
>emb|AJ851500.1| Gallus gallus mRNA for hypothetical protein, clone 4a6 Length = 3331 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtctt 92 |||||||||||||||||||||| Sbjct: 316 ccctcctcctcctcctcgtctt 295
>dbj|AK148104.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370017M10 product:legumain, full insert sequence Length = 1837 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 154 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 213 Query: 247 at 248 || Sbjct: 214 at 215
>dbj|AK149666.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530008L02 product:legumain, full insert sequence Length = 879 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 261 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 320 Query: 247 at 248 || Sbjct: 321 at 322
>dbj|AK155532.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630314E22 product:Warning: possibly reversed clone, full insert sequence Length = 1512 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 1427 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 1368 Query: 247 at 248 || Sbjct: 1367 at 1366
>gb|AC182811.1| Gasterosteus aculeatus clone VMRC28-119K14, complete sequence Length = 130423 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtct 91 |||||||||||||||||||||| Sbjct: 64565 cccctcctcctcctcctcgtct 64544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 217 caggcggacgtgtgccacgcgtaccagatcatgaagaagggcgggttgaaggatgagaac 276 ||||| || |||||||| ||||||||||| || ||||||| || ||||||| |||||| Sbjct: 26881087 caggccgatgtgtgccatgcgtaccagattctgcagaagggaggagtgaaggaggagaac 26881028 Query: 277 at 278 || Sbjct: 26881027 at 26881026 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 29631856 cctcctcctcctcctcgtctt 29631876 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 28548568 cctcctcctcctcctcgtctt 28548548 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 160 gggacgagatgggccgtcctcatcgccggctccaacggctactacaactaccgtcaccag 219 |||||||| ||||| || ||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 26881876 gggacgaggtgggcggtgctcgtcgccggctcctccggctacgggaactaccggcaccag 26881817 Query: 220 g 220 | Sbjct: 26881816 g 26881816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 19619428 cctcctcctcctcctcgtctt 19619408 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctcgtct 91 |||| ||||||||||||||||||| Sbjct: 34863044 caccgctcctcctcctcctcgtct 34863021 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcctcctcgtctt 92 |||||||||||||||||||| Sbjct: 31403135 ctcctcctcctcctcgtctt 31403116 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 29299191 ccctcctcctcctcctcgtc 29299210 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtct 91 |||||||||||||||||||| Sbjct: 26088268 cctcctcctcctcctcgtct 26088287 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 19572571 cacccctcctcctcctcctc 19572552 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 19492699 ccctcctcctcctcctcgtc 19492718
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gctcgccctgctcgtcgccggc 123 |||||||||||||||||||||| Sbjct: 171902 gctcgccctgctcgtcgccggc 171881
>ref|NM_022226.2| Rattus norvegicus legumain (Lgmn), mRNA Length = 1843 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 159 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 218 Query: 247 at 248 || Sbjct: 219 at 220
>gb|AF154349.1|AF154349 Rattus norvegicus legumain mRNA, complete cds Length = 1843 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 159 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 218 Query: 247 at 248 || Sbjct: 219 at 220
>gb|AC011456.2|AC011456 Homo sapiens chromosome 19 clone CTC-360P9, complete sequence Length = 156357 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ccctgctcacccctcctcctcc 82 |||||||||||||||||||||| Sbjct: 142878 ccctgctcacccctcctcctcc 142899
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 catcgtcttcatgtacgacgacatcg 304 ||||||||||||| |||||||||||| Sbjct: 170492 catcgtcttcatggacgacgacatcg 170517
>gb|AF044266.1|AF044266 Mus musculus preprolegumain mRNA, complete cds Length = 1765 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 205 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 264 Query: 247 at 248 || Sbjct: 265 at 266
>gb|BC087708.1| Rattus norvegicus legumain, mRNA (cDNA clone MGC:105274 IMAGE:7315308), complete cds Length = 1901 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 196 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 255 Query: 247 at 248 || Sbjct: 256 at 257
>gb|AC137148.14| Mus musculus chromosome 19, clone RP24-210C4, complete sequence Length = 168235 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 88041 ctcacccctcctcctcctcctc 88020
>gb|AC005547.1|AC005547 Homo sapiens chromosome 19, cosmid R29228, complete sequence Length = 46127 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ccctgctcacccctcctcctcc 82 |||||||||||||||||||||| Sbjct: 21196 ccctgctcacccctcctcctcc 21217
>ref|NM_011175.1| Mus musculus legumain (Lgmn), mRNA Length = 1889 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 206 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 265 Query: 247 at 248 || Sbjct: 266 at 267
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 461 gcggcagcggcaaggtcgtcagcagc 486 |||||||||||| ||||||||||||| Sbjct: 2296817 gcggcagcggcagggtcgtcagcagc 2296792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cctcgccgccctgctcggcg 439 |||||||||||||||||||| Sbjct: 404412 cctcgccgccctgctcggcg 404393
>emb|AJ000990.1|MMLEGUMAI Mus musculus mRNA for legumain Length = 1889 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 206 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 265 Query: 247 at 248 || Sbjct: 266 at 267
>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete sequence Length = 240125 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 62 cctgctcacccctcctcctcctcctcgtct 91 ||||||| |||||||||||| ||||||||| Sbjct: 104733 cctgctcccccctcctcctcttcctcgtct 104762
>dbj|AB032766.1| Rattus norvegicus mRNA for legumain, complete cds Length = 1357 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 187 ggctccaacggctactacaactaccgtcaccaggcggacgtgtgccacgcgtaccagatc 246 |||||||| |||| || || ||||| |||||||| |||| |||||||| ||||||||| Sbjct: 154 ggctccaatggctggtataattaccgacaccaggcagacgcatgccacgcctaccagatc 213 Query: 247 at 248 || Sbjct: 214 at 215
>dbj|AB064489.1| Mus musculus mp41 mRNA, 5'UTR, per repeat sequence Length = 3525 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcacccctcctcctcctcctc 87 |||||||||||||||||||||| Sbjct: 265 ctcacccctcctcctcctcctc 286
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 50050 cctcctcctcctcctcgtctt 50070
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 78302 cctcctcctcctcctcgtctt 78282
>gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, complete sequence Length = 230988 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 109503 cctcctcctcctcctcgtctt 109483
>ref|NM_185475.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3084 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 704 cctcctcctcctcctcgtctt 684
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 112526 cccctcctcctcctcctcgtc 112506
>gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, complete sequence Length = 163319 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 35478 cctcctcctcctcctcgtctt 35498
>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence Length = 243701 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 72389 cctcctcctcctcctcgtctt 72369
>ref|XM_479760.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1042 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 661 cctcctcctcctcctcgtctt 641
>ref|XM_475349.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 90 cccctcctcctcctcctcgtc 70
>ref|XM_466521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 436 tcacccctcctcctcctcctc 416
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 48494 tcacccctcctcctcctcctc 48474
>ref|XM_518641.1| PREDICTED: Pan troglodytes mitogen-activated protein kinase kinase kinase 7 (LOC462888), mRNA Length = 1932 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 185 cctcctcctcctcctcgtctt 205
>ref|NM_192944.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 279 cccctcctcctcctcctcgtc 299
>ref|XM_478737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1855 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 181 tcacccctcctcctcctcctc 161
>ref|XM_478370.1| Oryza sativa (japonica cultivar-group), mRNA Length = 477 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 310 cctcctcctcctcctcgtctt 290
>ref|NM_185751.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1228 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 192 cccctcctcctcctcctcgtc 212
>ref|NM_187806.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1492 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 136 cctcctcctcctcctcgtctt 156
>ref|XM_473539.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 703 cctcctcctcctcctcgtctt 683
>ref|XM_472337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 367 cctcctcctcctcctcgtctt 347
>gb|BT019655.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 mRNA, complete cds Length = 1821 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 20 cctcctcctcctcctcgtctt 40
>gb|BT019654.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 mRNA, complete cds Length = 1740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 20 cctcctcctcctcctcgtctt 40
>gb|BT019653.1| Synthetic construct Homo sapiens mitogen-activated protein kinase kinase kinase 7 mRNA, partial cds Length = 1740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 20 cctcctcctcctcctcgtctt 40
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 1.9 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcctcgtc-ttgtcgtcgca 101 |||||||||||||||||||| || | ||||||||||| Sbjct: 290373 ctcacccctcctcctcctccacgccgttgtcgtcgca 290337
>gb|BC022544.1| Homo sapiens cDNA clone IMAGE:4798922 Length = 1929 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 548 cctcctcctcctcctcgtctt 528
>gb|AC161108.2| Mus musculus chromosome 1, clone RP23-224G12, complete sequence Length = 207067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3654 cctcctcctcctcctcgtctt 3674
>gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alternatively spliced Length = 60615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 5631 cctcctcctcctcctcgtctt 5611
>gb|AF462247.1| Hemibagrus nemurus clone PCTE5 microsatellite sequence Length = 230 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 199 tcacccctcctcctcctcctc 219
>gb|AY023227.1| Oryza sativa microsatellite MRG5552 containing (GGA)X8, closest to marker L585, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 131 tcacccctcctcctcctcctc 111
>gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, complete sequence Length = 149726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 62467 cctcctcctcctcctcgtctt 62487
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 60463 cctcctcctcctcctcgtctt 60443
>gb|AC125273.9| Mus musculus chromosome 1, clone RP24-156N4, complete sequence Length = 187198 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 175666 cctcctcctcctcctcgtctt 175686
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 22553 cctcctcctcctcctcgtctt 22573 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ccctcctcctcctcctcgtcttgt 94 ||||||||||||||||| |||||| Sbjct: 159097 ccctcctcctcctcctcctcttgt 159120
>gb|U00065.1| Caenorhabditis elegans cosmid D1044, complete sequence Length = 40301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 33721 cctcctcctcctcctcgtctt 33741
>gb|AC122791.13| Mus musculus chromosome 13, clone RP24-266G22, complete sequence Length = 165861 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ctcacccctcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 40905 ctcacccctcctcctcctcct 40925
>ref|XM_867587.1| PREDICTED: Bos taurus similar to TATA box binding protein-associated factor, RNA polymerase II, Q (LOC615711), mRNA Length = 1239 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 964 cctcctcctcctcctcgtctt 944
>ref|XM_881802.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 10 (LOC507792), mRNA Length = 3050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2731 cctcctcctcctcctcgtctt 2751
>ref|XM_881790.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 9 (LOC507792), mRNA Length = 3314 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2995 cctcctcctcctcctcgtctt 3015
>ref|XM_881780.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 8 (LOC507792), mRNA Length = 3389 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3070 cctcctcctcctcctcgtctt 3090
>ref|XM_881773.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 7 (LOC507792), mRNA Length = 3074 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2755 cctcctcctcctcctcgtctt 2775
>ref|XM_584469.2| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 1 (LOC507792), mRNA Length = 2933 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2614 cctcctcctcctcctcgtctt 2634
>ref|XM_881747.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 6 (LOC507792), mRNA Length = 3401 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3082 cctcctcctcctcctcgtctt 3102
>ref|XM_881731.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 5 (LOC507792), mRNA Length = 2948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2629 cctcctcctcctcctcgtctt 2649
>ref|XM_881720.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 4 (LOC507792), mRNA Length = 3257 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2938 cctcctcctcctcctcgtctt 2958
>ref|XM_881710.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 3 (LOC507792), mRNA Length = 3074 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2755 cctcctcctcctcctcgtctt 2775
>ref|XM_868486.1| PREDICTED: Bos taurus similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Binding factor for early enhancer), transcript variant 2 (LOC507792), mRNA Length = 3005 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2686 cctcctcctcctcctcgtctt 2706
>ref|XM_366263.1| Magnaporthe grisea 70-15 hypothetical protein (MG10482.4) partial mRNA Length = 1713 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1345 cctcctcctcctcctcgtctt 1325
>gb|AF241734.2| Homo sapiens chromosome X clone RP1-34M10 map p11.4, complete sequence Length = 119916 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 5171 cctcctcctcctcctcgtctt 5191
>gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11.4, complete sequence Length = 163215 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 89624 cctcctcctcctcctcgtctt 89644
>ref|NM_194054.1| Mus musculus reticulon 4 (Rtn4), transcript variant 1, mRNA Length = 4627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 384 cctcctcctcctcctcgtctt 364
>ref|NM_194053.1| Mus musculus reticulon 4 (Rtn4), transcript variant 3, mRNA Length = 2266 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 384 cctcctcctcctcctcgtctt 364
>ref|NM_194052.1| Mus musculus reticulon 4 (Rtn4), transcript variant 2, mRNA Length = 2209 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 384 cctcctcctcctcctcgtctt 364
>ref|NM_145333.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), transcript variant D, mRNA Length = 2796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 325 cctcctcctcctcctcgtctt 345
>ref|NM_145332.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), transcript variant C, mRNA Length = 2877 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 325 cctcctcctcctcctcgtctt 345
>ref|NM_145331.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), transcript variant B, mRNA Length = 2850 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 182 cctcctcctcctcctcgtctt 202
>ref|NM_003188.2| Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), transcript variant A, mRNA Length = 2912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 325 cctcctcctcctcctcgtctt 345
>ref|XM_869064.1| PREDICTED: Bos taurus similar to WD repeat domain 52 (LOC616921), mRNA Length = 2664 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2359 cctcctcctcctcctcgtctt 2339
>ref|XM_951173.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) related to transport protein USO1 [Neurospora crassa OR74A] ) (NCU01644.1) partial mRNA Length = 3516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3481 cctcctcctcctcctcgtctt 3461
>gb|BC017715.2| Homo sapiens mitogen-activated protein kinase kinase kinase 7, transcript variant A, mRNA (cDNA clone MGC:21263 IMAGE:3906837), complete cds Length = 2745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 205 cctcctcctcctcctcgtctt 225
>ref|XM_958031.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2791 cctcctcctcctcctcgtctt 2771
>ref|XM_328082.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) related to transport protein USO1 [Neurospora crassa OR74A] ) (NCU01644.1) partial mRNA Length = 3516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3481 cctcctcctcctcctcgtctt 3461
>ref|XM_328568.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2791 cctcctcctcctcctcgtctt 2771
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 18021 cccctcctcctcctcctcgtc 18001
>ref|XM_868421.1| PREDICTED: Bos taurus similar to Sodium/potassium/calcium exchanger 3 precursor (Na(+)/K(+)/Ca(2+)-exchange protein 3) (LOC616407), partial mRNA Length = 1374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 954 cccctcctcctcctcctcgtc 934
>ref|NM_027236.1| Mus musculus RIKEN cDNA 2010003J03 gene (2010003J03Rik), mRNA Length = 2494 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1032 cctcctcctcctcctcgtctt 1012
>ref|NM_153757.1| Homo sapiens nucleosome assembly protein 1-like 5 (NAP1L5), mRNA Length = 1912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 550 cctcctcctcctcctcgtctt 530
>ref|NM_031896.3| Homo sapiens calcium channel, voltage-dependent, gamma subunit 7 (CACNG7), mRNA Length = 1564 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 869 cctcctcctcctcctcgtctt 889
>gb|AC134406.14| Mus musculus chromosome 9, clone RP24-349J23, complete sequence Length = 192663 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 130600 cctcctcctcctcctcgtctt 130620
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 100265 cctcctcctcctcctcgtctt 100285
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctcgtctt 92 |||||||||||||||||||| |||| Sbjct: 907432 cacccctcctcctcctcctcctctt 907408
>gb|BC009438.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone IMAGE:3508344), partial cds Length = 2205 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 487 cctcctcctcctcctcgtctt 467
>gb|BC032443.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone IMAGE:5123212), partial cds Length = 2043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 476 cctcctcctcctcctcgtctt 456
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 73905 cccctcctcctcctcctcgtc 73885
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence Length = 174095 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 113986 cctcctcctcctcctcgtctt 113966
>gb|AC112671.25| Mus musculus chromosome 13, clone RP24-299O19, complete sequence Length = 139581 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 8488 cctcctcctcctcctcgtctt 8468
>gb|BC009372.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:16640 IMAGE:4122128), complete cds Length = 2347 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 804 cctcctcctcctcctcgtctt 784
>gb|AC166052.5| Mus musculus BAC clone RP24-95N16 from chromosome 9, complete sequence Length = 175760 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 165974 cctcctcctcctcctcgtctt 165954
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 30254745 cctcctcctcctcctcgtctt 30254725 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 9836012 cccctcctcctcctcctcgtc 9836032 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 agctcaccggcagcggcagcggca 472 ||||||||||| |||||||||||| Sbjct: 34944412 agctcaccggcggcggcagcggca 34944389 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 25290060 cacccctcctcctcctcctc 25290041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccctcctcctcctcctcgtc 90 |||||||||||||||||||| Sbjct: 11600921 ccctcctcctcctcctcgtc 11600902 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cacccctcctcctcctcctc 87 |||||||||||||||||||| Sbjct: 3341953 cacccctcctcctcctcctc 3341934
>gb|AY486473.1|AY486470S04 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 29148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 21539 cccctcctcctcctcctcgtc 21519
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 20144 cctcctcctcctcctcgtctt 20164
>ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alpha motif domain containing 1 (LOC671345), mRNA Length = 1720 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 613 cctcctcctcctcctcgtctt 593
>ref|XM_620685.3| PREDICTED: Mus musculus similar to sterile alpha motif domain containing 1 (LOC546078), mRNA Length = 1201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 94 cctcctcctcctcctcgtctt 74
>ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alpha motif domain containing 1 (LOC666704), mRNA Length = 2071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 964 cctcctcctcctcctcgtctt 944
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 183630 cccctcctcctcctcctcgtc 183610
>ref|XM_541817.2| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant 1 (LOC484701), mRNA Length = 2787 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2159 cctcctcctcctcctcgtctt 2179
>ref|XM_843193.1| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant 2 (LOC484701), mRNA Length = 2999 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2159 cctcctcctcctcctcgtctt 2179
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 149699 cccctcctcctcctcctcgtc 149719
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 154370 cccctcctcctcctcctcgtc 154390
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 105416 cccctcctcctcctcctcgtc 105396
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 72112 cccctcctcctcctcctcgtc 72092
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 72632 cctcctcctcctcctcgtctt 72612
>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence Length = 209091 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ctcctcctcctcctcgtcttg 93 ||||||||||||||||||||| Sbjct: 69741 ctcctcctcctcctcgtcttg 69761
>gb|AC127358.3| Mus musculus BAC clone RP23-109B9 from chromosome 18, complete sequence Length = 162003 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 149687 cctcctcctcctcctcgtctt 149667 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 149588 cctcctcctcctcctcgtctt 149568
>ref|XM_809181.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053511661.100) partial mRNA Length = 4854 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 3850 cctcctcctcctcctcgtctt 3830
>gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome 13, complete sequence Length = 173382 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 93531 cctcctcctcctcctcgtctt 93511
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 144454 cctcctcctcctcctcgtctt 144474 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 144355 cctcctcctcctcctcgtctt 144375
>gb|AC128702.4| Mus musculus BAC clone RP24-239M3 from chromosome 9, complete sequence Length = 159431 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 106181 cctcctcctcctcctcgtctt 106161
>gb|AC110823.5| Mus musculus BAC clone RP24-366C12 from chromosome 7, complete sequence Length = 141116 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 74428 cctcctcctcctcctcgtctt 74408
>gb|AC125077.4| Mus musculus BAC clone RP23-473K6 from chromosome 6, complete sequence Length = 184783 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 103523 cctcctcctcctcctcgtctt 103503
>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence Length = 192875 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 129624 cctcctcctcctcctcgtctt 129644
>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence Length = 188719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 61856 cctcctcctcctcctcgtctt 61876
>gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosome 19, complete sequence Length = 189613 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 98356 ctcacccctcctcctcctcct 98336
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcacccctcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 93523 ctcacccctcctcctcctcct 93503
>ref|XM_807314.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503579.10) partial mRNA Length = 3884 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 2150 cccctcctcctcctcctcgtc 2130
>emb|CR712308.2|CNS0GCKG Tetraodon nigroviridis full-length cDNA Length = 682 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 218 cccctcctcctcctcctcgtc 198
>emb|CR694092.2|CNS0FYIG Tetraodon nigroviridis full-length cDNA Length = 853 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 280 tcacccctcctcctcctcctc 300
>gb|BC056373.1| Mus musculus cDNA clone MGC:73436 IMAGE:6847916, complete cds Length = 4518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 255 cctcctcctcctcctcgtctt 235
>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence Length = 188119 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 77533 cctcctcctcctcctcgtctt 77553
>gb|BC043619.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:50958 IMAGE:6156267), complete cds Length = 2360 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 822 cctcctcctcctcctcgtctt 802
>gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, complete sequence Length = 172160 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 164733 cctcctcctcctcctcgtctt 164753
>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence Length = 248718 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 42184 cctcctcctcctcctcgtctt 42204
>gb|AC104863.12| Mus musculus chromosome 6, clone RP23-109C11, complete sequence Length = 198321 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 195058 cctcctcctcctcctcgtctt 195038
>gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence Length = 173068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 90822 cctcctcctcctcctcgtctt 90802
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence Length = 203468 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 197278 cctcctcctcctcctcgtctt 197298
>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence Length = 178775 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 92864 cctcctcctcctcctcgtctt 92884
>emb|CR637793.2|CNS0ER3B Tetraodon nigroviridis full-length cDNA Length = 1566 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 1002 tcacccctcctcctcctcctc 1022
>emb|CR637626.2|CNS0EQYO Tetraodon nigroviridis full-length cDNA Length = 1554 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 991 tcacccctcctcctcctcctc 1011
>emb|Z94160.1|HS63G5 Human DNA sequence from clone RP1-63G5 on chromosome 22q12.3-13.1, complete sequence Length = 97585 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 95445 cctcctcctcctcctcgtctt 95465
>emb|AL596225.11| Human DNA sequence from clone RP11-30D7 on chromosome 1 Contains part of the gene for a novel protein (FLJ31862, FLJ22091, FLJ10597) and two CpG islands, complete sequence Length = 148750 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cacccctcctcctcctcctcg 88 ||||||||||||||||||||| Sbjct: 118790 cacccctcctcctcctcctcg 118810
>emb|AL590683.16| Human DNA sequence from clone RP11-10N16 on chromosome 1 Contains the 5' end of the IL22RA1 gene for interleukin 22 receptor alpha 1, the IL28RA gene for interleukin 28 receptor alpha (interferon, lambda receptor), a novel gene and the 3' end of a novel gene, complete sequence Length = 164684 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 ctgctcacccctcctcctcctcctc 87 |||||| |||||||||||||||||| Sbjct: 162560 ctgctctcccctcctcctcctcctc 162536
>ref|XM_783179.1| PREDICTED: Strongylocentrotus purpuratus similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (LOC583259), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 338 cctcctcctcctcctcgtctt 358
>gb|AY344483.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds Length = 1172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 773 cctcctcctcctcctcgtctt 753
>gb|AC115283.3| Homo sapiens chromosome 3 clone RP11-632K8, complete sequence Length = 193486 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 cttccctgctcacccctcctcctcc 82 ||||| ||||||||||||||||||| Sbjct: 65478 cttccttgctcacccctcctcctcc 65454
>emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J12 on chromosome 6q16.1-16.3 Contains the 5' end of the MAP3K7 gene for mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1, TAK1) and two CpG islands, complete sequence Length = 86398 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1125 cctcctcctcctcctcgtctt 1105
>ref|XM_967398.1| PREDICTED: Tribolium castaneum similar to 39 kDa FK506-binding nuclear protein (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (LOC661223), mRNA Length = 1134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 559 cctcctcctcctcctcgtctt 539
>emb|AL683873.14| Mouse DNA sequence from clone RP23-119G22 on chromosome 13 Contains part of a novel gene, complete sequence Length = 104602 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 77673 cctcctcctcctcctcgtctt 77693
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 208392 cctcctcctcctcctcgtctt 208412
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 39358 cctcctcctcctcctcgtctt 39338
>emb|AL670543.1|NCB7K22 Neurospora crassa DNA linkage group II BAC clone B7K22 Length = 88306 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 63239 cctcctcctcctcctcgtctt 63219
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 19076 cctcctcctcctcctcgtctt 19096
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 134545 cctcctcctcctcctcgtctt 134565
>emb|AL390189.2|NCB13I18 Neurospora crassa DNA linkage group II BAC clone B13I18 Length = 62393 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 4384 cctcctcctcctcctcgtctt 4364
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 94456 cctcctcctcctcctcgtctt 94436
>gb|BC093869.1| Homo sapiens calcium channel, voltage-dependent, gamma subunit 7, mRNA (cDNA clone MGC:120904 IMAGE:7939714), complete cds Length = 1007 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 949 cctcctcctcctcctcgtctt 969
>gb|BC065663.1| Danio rerio VAMP (vesicle-associated membrane protein)-associated protein A, mRNA (cDNA clone MGC:77382 IMAGE:6969291), complete cds Length = 1950 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 891 cctcctcctcctcctcgtctt 911
>emb|CR857142.1| Pongo pygmaeus mRNA; cDNA DKFZp469K1121 (from clone DKFZp469K1121) Length = 2761 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 227 cctcctcctcctcctcgtctt 247
>emb|BX927262.9| Zebrafish DNA sequence from clone CH211-276D15 in linkage group 5, complete sequence Length = 170455 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 96634 cctcctcctcctcctcgtctt 96614
>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence Length = 172626 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ctgctcacccctcctcctcct 83 ||||||||||||||||||||| Sbjct: 49439 ctgctcacccctcctcctcct 49459
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 27906 cccctcctcctcctcctcgtc 27926
>gb|AY114153.1| Mus musculus nogo-B mRNA, complete cds Length = 1276 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 255 cctcctcctcctcctcgtctt 235
>gb|AY114152.1| Mus musculus nogo-A mRNA, complete cds Length = 3821 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 382 cctcctcctcctcctcgtctt 362
>gb|AC090206.7| Homo sapiens chromosome 18, clone RP11-349H17, complete sequence Length = 91609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 30099 cctcctcctcctcctcgtctt 30079
>emb|AL834329.1|HSM805382 Homo sapiens mRNA; cDNA DKFZp434K0835 (from clone DKFZp434K0835) Length = 1907 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 533 cctcctcctcctcctcgtctt 513
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence Length = 169997 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 86683 cctcctcctcctcctcgtctt 86703
>dbj|AK220511.1| Mus musculus mRNA for mKIAA0886 protein Length = 4648 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 387 cctcctcctcctcctcgtctt 367
>gb|AC023678.4| Drosophila melanogaster 3L BAC RP98-14K14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 77605 cctcctcctcctcctcgtctt 77625
>emb|BX321905.19| Zebrafish DNA sequence from clone DKEYP-13F6 in linkage group 9, complete sequence Length = 164006 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcacccctcctcctcctcctc 87 ||||||||||||||||||||| Sbjct: 94493 tcacccctcctcctcctcctc 94473
>gb|AC093437.2| Drosophila melanogaster 3L BAC RP98-5P17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 197878 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 141718 cctcctcctcctcctcgtctt 141698
>ref|NM_199918.2| Danio rerio VAMP (vesicle-associated membrane protein)-associated protein A (vapa), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 891 cctcctcctcctcctcgtctt 911
>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160629 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 52764 cctcctcctcctcctcgtctt 52784
>emb|CR618268.1| full-length cDNA clone CS0DL009YL06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1541 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 726 cctcctcctcctcctcgtctt 706
>gb|AC008385.7| Homo sapiens chromosome 5 clone CTC-224D3, complete sequence Length = 151712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 19052 cctcctcctcctcctcgtctt 19072
>emb|CR596328.1| full-length cDNA clone CS0DF025YD21 of Fetal brain of Homo sapiens (human) Length = 1502 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 137 cctcctcctcctcctcgtctt 157
>dbj|AK054689.1| Homo sapiens cDNA FLJ30127 fis, clone BRACE1000115, weakly similar to NUCLEOSOME ASSEMBLY PROTEIN 1-LIKE 2 Length = 1912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 550 cctcctcctcctcctcgtctt 530
>gb|AC108065.3| Homo sapiens BAC clone RP11-496N17 from 4, complete sequence Length = 111908 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 34924 cctcctcctcctcctcgtctt 34944
>emb|CR591413.1| full-length cDNA clone CS0DF007YO10 of Fetal brain of Homo sapiens (human) Length = 1870 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 531 cctcctcctcctcctcgtctt 511
>dbj|AK021532.1| Homo sapiens cDNA FLJ11470 fis, clone HEMBA1001672, highly similar to Homo sapiens methyl-CpG binding domain-containing protein MBD3 (MBD3) mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 622 cctcctcctcctcctcgtctt 602
>dbj|AK001474.1| Homo sapiens cDNA FLJ10612 fis, clone NT2RP2005358, highly similar to Homo sapiens methyl-CpG binding domain-containing protein MBD3 mRNA Length = 2198 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 668 cctcctcctcctcctcgtctt 648
>gb|AF411465.1| Petromyzon marinus transcription factor Pax7 mRNA, complete cds Length = 2190 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cccctcctcctcctcctcgtc 90 ||||||||||||||||||||| Sbjct: 700 cccctcctcctcctcctcgtc 680
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1567999 cctcctcctcctcctcgtctt 1567979
>ref|NM_140288.2| Drosophila melanogaster lethal (3) j2D3 CG6801-RA (l(3)j2D3), mRNA Length = 1479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1048 cctcctcctcctcctcgtctt 1028
>gb|AC160863.10| Mus musculus 10 BAC RP23-234F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189718 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 44307 cctcctcctcctcctcgtctt 44327
>ref|NM_080335.2| Drosophila melanogaster Protein phosphatase 2C CG2984-RA (Pp2C1), mRNA Length = 5231 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 2729 cctcctcctcctcctcgtctt 2709
>ref|NM_003926.5| Homo sapiens methyl-CpG binding domain protein 3 (MBD3), mRNA Length = 2559 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 860 cctcctcctcctcctcgtctt 840
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence Length = 228283 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 148967 cctcctcctcctcctcgtctt 148947
>dbj|AK158977.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530022P09 product:hypothetical Eukaryotic initiation factor 1A (eIF-1A)/S1 domain IF1 type profile/Nucleic acid-binding OB-fold containing protein, full insert sequence Length = 2281 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 850 cctcctcctcctcctcgtctt 830
>dbj|AK153194.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127C13 product:hypothetical Eukaryotic initiation factor 1A (eIF-1A)/S1 domain IF1 type profile/Nucleic acid-binding OB-fold containing protein, full insert sequence Length = 1036 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 863 cctcctcctcctcctcgtctt 843
>gb|AY061293.1| Drosophila melanogaster LD20590 full length cDNA Length = 1496 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 1048 cctcctcctcctcctcgtctt 1028
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 tcaccggcagcggcagcggca 472 ||||||||||||||||||||| Sbjct: 235312 tcaccggcagcggcagcggca 235292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tcgccgccctgctcggcgac 441 |||||||||||||||||||| Sbjct: 2222894 tcgccgccctgctcggcgac 2222875
>dbj|AK168598.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920037J06 product:hypothetical Eukaryotic initiation factor 1A (eIF-1A)/S1 domain IF1 type profile/Nucleic acid-binding OB-fold containing protein, full insert sequence Length = 1032 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 cctcctcctcctcctcgtctt 92 ||||||||||||||||||||| Sbjct: 859 cctcctcctcctcctcgtctt 839 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,711,251 Number of Sequences: 3902068 Number of extensions: 4711251 Number of successful extensions: 540821 Number of sequences better than 10.0: 709 Number of HSP's better than 10.0 without gapping: 753 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 518802 Number of HSP's gapped (non-prelim): 21821 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
