>PIRL_LYCES (Q9SEE4) Pirin-like protein|
          Length = 291

 Score =  112 bits (279), Expect = 1e-24
 Identities = 51/81 (62%), Positives = 62/81 (76%)
 Frame = +3

Query: 324 RSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFE 503
           R R VV+K +   +  GDG  +RRSIGRPELQ+LDPF+ LDEF  S+PAGF DHPHRGFE
Sbjct: 9   RPRLVVKKVLARAQNEGDGAIVRRSIGRPELQNLDPFLMLDEFSVSQPAGFPDHPHRGFE 68

Query: 504 NVTYMLEGGLSYHDFSDHKGT 566
            VTYML+G  ++ DF+ HKGT
Sbjct: 69  TVTYMLQGAFTHQDFAGHKGT 89

>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120|
          Length = 296

 Score =  100 bits (250), Expect = 2e-21
 Identities = 46/80 (57%), Positives = 57/80 (71%)
 Frame = +3

Query: 327 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 506
           SR V++K   + +  GDG  +RR I R E + LDPF+ LDEF  S PAGF DHPHRGFE 
Sbjct: 11  SRPVIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFLMLDEFSVSPPAGFPDHPHRGFET 70

Query: 507 VTYMLEGGLSYHDFSDHKGT 566
           VTY+LEGG+++ DF  HKGT
Sbjct: 71  VTYVLEGGITHQDFKGHKGT 90

>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590|
          Length = 310

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 45/85 (52%), Positives = 53/85 (62%)
 Frame = +3

Query: 309 KHPVRRSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHP 488
           K     +R VV+K    +   G G  +RRSIGR E +  DPF+ LDEF  S PAGF DHP
Sbjct: 6   KSSATNTRLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFLVLDEFSVSAPAGFPDHP 65

Query: 489 HRGFENVTYMLEGGLSYHDFSDHKG 563
           HRGFE VTYMLEG + + D   HKG
Sbjct: 66  HRGFETVTYMLEGEILHEDCEGHKG 90

>PIR_HUMAN (O00625) Pirin|
          Length = 290

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = +3

Query: 327 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 506
           S+ V    +   +  G G  +RRSIGRPEL++LDPF+  DEF+  RP GF DHPHRGFE 
Sbjct: 4   SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFET 63

Query: 507 VTYMLEGG-LSYHDFSDHKG 563
           V+Y+LEGG +++ DF  H G
Sbjct: 64  VSYLLEGGSMAHEDFCGHTG 83

>PIR_MOUSE (Q9D711) Pirin|
          Length = 290

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = +3

Query: 327 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 506
           S+ V    +   +  G G  +RRSIGRPEL++LDPF+  DEF+  +P GF DHPHRGFE 
Sbjct: 4   SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGKPGGFPDHPHRGFET 63

Query: 507 VTYMLEGG-LSYHDFSDHKG 563
           V+Y+LEGG +++ DF  H G
Sbjct: 64  VSYLLEGGSMAHEDFCGHVG 83

>PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1)|
          Length = 287

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 39/79 (49%), Positives = 54/79 (68%)
 Frame = +3

Query: 330 RAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFENV 509
           R V++K + + +  G+G  +R  I + + + LDPF+ L EF FS  AGF DHPHRGFE+V
Sbjct: 10  RIVIKKVLAKLEKEGEGAVVRNGITKIDQKLLDPFVLLVEFSFSLSAGFPDHPHRGFESV 69

Query: 510 TYMLEGGLSYHDFSDHKGT 566
           TYML+GG+ + D   HKGT
Sbjct: 70  TYMLQGGIIHKDPKGHKGT 88

>PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260|
          Length = 271

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +3

Query: 390 RRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFENVTYMLEGGLSYHDFSDHKGT 566
           + S  + + + LDPF+SL EF  S P GF DHPHRGFE+VTYM +GG+ + D + +KGT
Sbjct: 10  KASPSKSDHELLDPFVSLVEFSVSPPGGFKDHPHRGFESVTYMFQGGIIHQDCNGNKGT 68

>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240|
          Length = 285

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
 Frame = +3

Query: 372 GDGFALRRSIGRPELQSLDPFISLDEFEFSRP----AGFSDHPHRGFENVTYMLEGGLSY 539
           G G  L R IG P  +  DPF+ LD+F+   P    AGF  HPHRGFE VTYMLEG + +
Sbjct: 19  GAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRH 78

Query: 540 HDFSDHKG 563
            D   ++G
Sbjct: 79  EDHLGNRG 86

>Y481_CAUCR (P58112) Hypothetical protein CC0481|
          Length = 276

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = +3

Query: 372 GDGFALRRSIGRPELQSLDPFISLDEFEFSRPA----GFSDHPHRGFENVTYMLEGGLSY 539
           G G  L R +G PE Q  DPF+ LD F+  + +    GF DHPHRGFE VTYMLEG + +
Sbjct: 18  GAGVRLTRMLGTPEAQMFDPFLMLDCFDNDQASDYLGGFPDHPHRGFETVTYMLEGRMRH 77

Query: 540 HDFSDHKG 563
            D +  +G
Sbjct: 78  KDNTGREG 85

>Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969|
          Length = 282

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +3

Query: 324 RSRAVVQKFMCERKVVGDGFALRRSIG--RPELQSLDPFISLDEFEFSRPA----GFSDH 485
           + R + Q    +    GDG  ++R  G  RP   +  PF+ LDE +    A    GF  H
Sbjct: 3   KDREIRQTVPAQPTSDGDGVKIQRIAGFQRP---NFSPFLMLDELKADSQADYIGGFPPH 59

Query: 486 PHRGFENVTYMLEGGLSYHD 545
           PHRG E +TYML+G   + D
Sbjct: 60  PHRGIETLTYMLQGHFQHRD 79

>Y2418_PSEAE (Q9I163) Hypothetical protein PA2418|
          Length = 286

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
 Frame = +3

Query: 360 RKVVGDGFALRRSIGRPEL-QSLDPFISLDEFEFSRPAGF---------SDHPHRGFENV 509
           R  VGDGF +R       L Q + PF+ LD   ++ PA F           HPHRGFE V
Sbjct: 13  RHWVGDGFPVRSLFSYNTLGQHISPFLLLD---YAGPADFPPAQQRRGVGQHPHRGFETV 69

Query: 510 TYMLEGGLSYHD 545
           T + +G + +HD
Sbjct: 70  TIVYQGEVEHHD 81

>Y133_THEAC (Q9HLU2) Hypothetical protein Ta0133|
          Length = 261

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           GF  HPHRG E +TY ++G   + D   H+G
Sbjct: 13  GFPWHPHRGIETITYQIKGKTFHEDSEGHRG 43

>Y1210_PSEAE (Q9I4C8) Hypothetical protein PA1210|
          Length = 232

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 453 EFSRPAGFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           E +  +GF  HPHR  E +TY+ EG +++ D   +KG
Sbjct: 47  EIAAGSGFPPHPHRDMEIITYVREGAITHQDSLGNKG 83

>Y1337_ZYMMO (Q9XBR7) Hypothetical protein ZMO1337|
          Length = 235

 Score = 35.8 bits (81), Expect = 0.087
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           GF  HPH+  E VTY+ EG L++ D   +KG
Sbjct: 53  GFGMHPHKDMEIVTYIREGALTHEDSLGNKG 83

>Y187_MYCBO (P65725) Hypothetical protein Mb0187c|
          Length = 244

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 468 AGFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           +GF  HPHR  E VT++L G L + D + + G
Sbjct: 55  SGFDPHPHRDMEIVTWVLRGALRHQDSAGNSG 86

>Y181_MYCTU (P65724) Hypothetical protein Rv0181c/MT0190|
          Length = 244

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 468 AGFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           +GF  HPHR  E VT++L G L + D + + G
Sbjct: 55  SGFDPHPHRDMEIVTWVLRGALRHQDSAGNSG 86

>YHHW_ECOLI (P46852) Protein yhhW|
          Length = 231

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHDFSDHK 560
           GF  HPH+  E +TY+LEG + + D   +K
Sbjct: 53  GFGTHPHKDMEILTYVLEGTVEHQDSMGNK 82

>YHHW_ECO57 (P58116) Protein yhhW|
          Length = 231

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHDFSDHK 560
           GF  HPH+  E +TY+LEG + + D   +K
Sbjct: 53  GFGTHPHKDMEILTYVLEGTVEHQDSMGNK 82

>Y1473_CAUCR (P58113) Hypothetical protein CC1473|
          Length = 232

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 453 EFSRPAGFSDHPHRGFENVTYMLEGGLSYHDFSDHKG 563
           E +   GF  HPH   E +TY+ +G +++ D   +KG
Sbjct: 47  EIAPNTGFPPHPHSDMEIITYVRDGAITHQDNLGNKG 83

>Y3178_CAUCR (P58114) Hypothetical protein CC3178|
          Length = 288

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
 Frame = +3

Query: 348 FMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFE-------FSRPAGFSDHPHRGFEN 506
           F   RK +G+ F + R +     + + PF  LD          F + A    HPH G   
Sbjct: 6   FDARRKDLGN-FEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHIGLST 64

Query: 507 VTYMLEGGLSYHD 545
           +TY+ EG +++ D
Sbjct: 65  LTYLFEGEITHRD 77

>Y1773_SYNY3 (P73623) Hypothetical protein sll1773|
          Length = 232

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHD 545
           GF+ H H+  E VTY+LEG L + D
Sbjct: 53  GFATHGHKDMEIVTYVLEGELEHKD 77

>Y1205_PSEAE (Q9I4D3) Hypothetical protein PA1205|
          Length = 315

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = +3

Query: 324 RSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLD-----EFEFSRPAGFSDHP 488
           R   ++Q+       +G G  + R +   + + +  +  LD     EFE         HP
Sbjct: 19  RHEHLLQRVTARAAEIGGGITVSRLMPSRQRRMIGAWCFLDHAGPAEFEPGGGLAVGPHP 78

Query: 489 HRGFENVTYMLEGGLSYHD 545
           H G +  T+M++G   + D
Sbjct: 79  HIGLQTFTWMIQGEALHRD 97

>Y1685_PASMU (Q9CKD7) Hypothetical protein PM1685|
          Length = 233

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 471 GFSDHPHRGFENVTYMLEGGLSYHD 545
           GF  HPH+  E +TY+L G + + D
Sbjct: 55  GFDMHPHQDMEILTYILSGTIEHQD 79

>RSP4_CHLRE (Q01656) Flagellar radial spoke protein 4|
          Length = 465

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 440 GDERIQALQLRPANAPPESEAVAD 369
           G+   Q L+L+PA  PPE EA AD
Sbjct: 441 GEVETQELELKPAPPPPEEEAEAD 464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,055,941
Number of Sequences: 219361
Number of extensions: 995837
Number of successful extensions: 2871
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)