ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
2dbj|AK063419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa... 72 2e-09
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
6emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G... 72 2e-09
7gb|AC102129.9| Mus musculus chromosome 7, clone RP23-220N19, com... 48 0.031
8gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, com... 48 0.031
9gb|AC158550.4| Mus musculus chromosome 7, clone RP24-192B7, comp... 48 0.031
10gb|AY107459.1| Zea mays PCO099192 mRNA sequence 46 0.12
11emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in... 44 0.48
12gb|AY772984.1| HIV-1 clone M389_clone11 from Kenya nonfunctional... 42 1.9
13gb|AY772983.1| HIV-1 clone M389_clone5 from Kenya gag protein (g... 42 1.9
14ref|XM_522257.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 1.9
15gb|BC063875.1| Homo sapiens hypothetical protein FLJ90231, mRNA ... 42 1.9
16gb|BC040605.1| Homo sapiens cDNA clone IMAGE:5271039, with appar... 42 1.9
17dbj|AK124514.1| Homo sapiens cDNA FLJ42523 fis, clone BRACE3001217 42 1.9
18dbj|AK074712.1| Homo sapiens cDNA FLJ90231 fis, clone NT2RM20004... 42 1.9
19gb|AF144817.1|AF144817 HIV-1 isolate DRCM13 from Democratic Repu... 42 1.9
20gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ... 42 1.9
21emb|AL591977.1| Listeria monocytogenes strain EGD, complete geno... 42 1.9
22gb|DQ243548.1| Bombyx mori chromosome 11 microsatellite S1105-R ... 42 1.9
23dbj|AP000859.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 42 1.9
24gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 7.6
25gb|U92828.1| Homo sapiens clone 429-7 CTG trinucleotide repeat g... 40 7.6
26gb|DQ479366.1| Phytolacca americana TM6-like protein (TM6-2) mRN... 40 7.6
27gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.6
28gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
29gb|BC067923.2| Xenopus tropicalis discs, large homolog 7 (Drosop... 40 7.6
30emb|AL513175.10| Human DNA sequence from clone RP11-142L4 on chr... 40 7.6
31emb|AL353641.9| Human DNA sequence from clone RP11-142P12 on chr... 40 7.6
32emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.6
33ref|NM_213673.2| Xenopus tropicalis discs, large homolog 7 (Dros... 40 7.6
34gb|BC099363.1| Xenopus laevis cDNA clone MGC:116559 IMAGE:687733... 40 7.6
35dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, who... 40 7.6
36gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.6
37gb|AC012404.9| Homo sapiens, clone RP11-39M21, complete sequence 40 7.6
38gb|DQ119137.1| Aplysia californica nonmuscle myosin II mRNA, par... 40 7.6
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
41gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N... 40 7.6
42gb|AC108112.2| Homo sapiens chromosome 5 clone RP11-267A15, comp... 40 7.6
43dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
44ref|XM_550960.1| Anopheles gambiae str. PEST ENSANGP00000028899 ... 40 7.6
45ref|XM_321211.2| Anopheles gambiae str. PEST ENSANGP00000020067 ... 40 7.6
46emb|AJ326077.1|HSA326077 Homo sapiens genomic sequence surroundi... 40 7.6
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
48gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 7.6 
>dbj|AK100244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056E18, full
           insert sequence
          Length = 1030

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 367 tcgtcggctgtcgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgccg 426
           ||||||| || |||||||| || ||||||| |||||||||  | |||||||||||||| |
Sbjct: 362 tcgtcggttgccgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgcgg 421

                                                          
Query: 427 ggttcacgaaggtgaagaacctggagggtggctacctctccttgctc 473
           | |||| ||| |||| || ||| || || ||||||||||||||||||
Sbjct: 422 gattcaagaacgtgaggatccttgaaggcggctacctctccttgctc 468



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                       
Query: 214 tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
           |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 209 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 268

                           
Query: 274 cttactacctctccgt 289
           | ||||||||||||||
Sbjct: 269 cctactacctctccgt 284
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>dbj|AK063419.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C02, full
           insert sequence
          Length = 1413

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 367 tcgtcggctgtcgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgccg 426
           ||||||| || |||||||| || ||||||| |||||||||  | |||||||||||||| |
Sbjct: 362 tcgtcggttgccgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgcgg 421

                                                          
Query: 427 ggttcacgaaggtgaagaacctggagggtggctacctctccttgctc 473
           | |||| ||| |||| || ||| || || ||||||||||||||||||
Sbjct: 422 gattcaagaacgtgaggatccttgaaggcggctacctctccttgctc 468



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                       
Query: 214 tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
           |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 209 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 268

                           
Query: 274 cttactacctctccgt 289
           | ||||||||||||||
Sbjct: 269 cctactacctctccgt 284
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 214      tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
                |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 13701630 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 13701689

                                
Query: 274      cttactacctctccgt 289
                | ||||||||||||||
Sbjct: 13701690 cctactacctctccgt 13701705



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 378      cgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgc 424
                |||||||| || ||||||| |||||||||  | ||||||||||||||
Sbjct: 13701934 cgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgc 13701980
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>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145118

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 214   tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
             |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 35231 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 35290

                             
Query: 274   cttactacctctccgt 289
             | ||||||||||||||
Sbjct: 35291 cctactacctctccgt 35306



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 378   cgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgc 424
             |||||||| || ||||||| |||||||||  | ||||||||||||||
Sbjct: 35535 cgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgc 35581
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 214      tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
                |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 13655904 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 13655963

                                
Query: 274      cttactacctctccgt 289
                | ||||||||||||||
Sbjct: 13655964 cctactacctctccgt 13655979



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 378      cgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgc 424
                |||||||| || ||||||| |||||||||  | ||||||||||||||
Sbjct: 13656208 cgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgc 13656254
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>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 155451

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 214   tggacgtgcgcatgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgc 273
             |||||||| | |||||||||||||| |||   ||||| |||||||| || ||||||||||
Sbjct: 17283 tggacgtgaggatgtgggaggactttgacaagggccacgtcgccggcgcccgcaacgtgc 17342

                             
Query: 274   cttactacctctccgt 289
             | ||||||||||||||
Sbjct: 17343 cctactacctctccgt 17358



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 378   cgctccggggtgcggtccaggctcgccaccaccgaccttgtcgccgc 424
             |||||||| || ||||||| |||||||||  | ||||||||||||||
Sbjct: 17587 cgctccggcgtccggtccaagctcgccacggcagaccttgtcgccgc 17633
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>gb|AC102129.9| Mus musculus chromosome 7, clone RP23-220N19, complete sequence
          Length = 178200

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 105   tcatccatgggctccctgggaagc 128
             ||||||||||||||||||||||||
Sbjct: 85647 tcatccatgggctccctgggaagc 85624
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>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence
          Length = 191999

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 105    tcatccatgggctccctgggaagc 128
              ||||||||||||||||||||||||
Sbjct: 186692 tcatccatgggctccctgggaagc 186669
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>gb|AC158550.4| Mus musculus chromosome 7, clone RP24-192B7, complete sequence
          Length = 169846

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 105   tcatccatgggctccctgggaagc 128
             ||||||||||||||||||||||||
Sbjct: 23127 tcatccatgggctccctgggaagc 23104
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>gb|AY107459.1| Zea mays PCO099192 mRNA sequence
          Length = 709

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgtgggaggacttcgaccgcggccatgtcgccggagcgcgcaacgtgccttactacctc 284
           ||||||||||| || |||   |||||||||||||| || || || || || |||||||||
Sbjct: 93  atgtgggaggattttgacaagggccatgtcgccggtgctcggaatgttccctactacctc 152

                  
Query: 285 tccgtca 291
           |||||||
Sbjct: 153 tccgtca 159
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>emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in linkage group 19,
             complete sequence
          Length = 72609

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 533   tgattttcctttgtttttcaag 554
             ||||||||||||||||||||||
Sbjct: 61190 tgattttcctttgtttttcaag 61169
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>gb|AY772984.1| HIV-1 clone M389_clone11 from Kenya nonfunctional gag protein (gag)
           gene, complete sequence
          Length = 1586

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 490 cacagcaggcagcagcagcca 510
           |||||||||||||||||||||
Sbjct: 410 cacagcaggcagcagcagcca 430
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>gb|AY772983.1| HIV-1 clone M389_clone5 from Kenya gag protein (gag) gene, complete
           cds
          Length = 1562

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 490 cacagcaggcagcagcagcca 510
           |||||||||||||||||||||
Sbjct: 416 cacagcaggcagcagcagcca 436
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>ref|XM_522257.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ90231
            (LOC466857), mRNA
          Length = 3969

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  gagcgtgggcacggaggcggc 178
            |||||||||||||||||||||
Sbjct: 3319 gagcgtgggcacggaggcggc 3299
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>gb|BC063875.1| Homo sapiens hypothetical protein FLJ90231, mRNA (cDNA clone
            MGC:75414 IMAGE:30378404), complete cds
          Length = 3303

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  gagcgtgggcacggaggcggc 178
            |||||||||||||||||||||
Sbjct: 2208 gagcgtgggcacggaggcggc 2188
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>gb|BC040605.1| Homo sapiens cDNA clone IMAGE:5271039, with apparent retained intron
          Length = 2591

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  gagcgtgggcacggaggcggc 178
            |||||||||||||||||||||
Sbjct: 1486 gagcgtgggcacggaggcggc 1466
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>dbj|AK124514.1| Homo sapiens cDNA FLJ42523 fis, clone BRACE3001217
          Length = 3862

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  gagcgtgggcacggaggcggc 178
            |||||||||||||||||||||
Sbjct: 2772 gagcgtgggcacggaggcggc 2752
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>dbj|AK074712.1| Homo sapiens cDNA FLJ90231 fis, clone NT2RM2000423, weakly similar
           to BETA-GALACTOSIDASE PRECURSOR (EC 3.2.1.23)
          Length = 1650

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 158 gagcgtgggcacggaggcggc 178
           |||||||||||||||||||||
Sbjct: 480 gagcgtgggcacggaggcggc 460
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>gb|AF144817.1|AF144817 HIV-1 isolate DRCM13 from Democratic Republic of the Congo gag
           protein (gag) gene, partial cds
          Length = 310

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 490 cacagcaggcagcagcagcca 510
           |||||||||||||||||||||
Sbjct: 227 cacagcaggcagcagcagcca 247
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>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
             chivosazol biosynthetic gene cluster, complete sequence;
             and hypothetical protein gene, complete cds
          Length = 96547

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   cgcggccatgtcgccggagcg 263
             |||||||||||||||||||||
Sbjct: 68073 cgcggccatgtcgccggagcg 68093
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>emb|AL591977.1| Listeria monocytogenes strain EGD, complete genome, segment 5/12
          Length = 270050

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 187    tgctggtgtcggagcagtacg 207
              |||||||||||||||||||||
Sbjct: 250138 tgctggtgtcggagcagtacg 250158
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>gb|DQ243548.1| Bombyx mori chromosome 11 microsatellite S1105-R sequence
          Length = 625

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 531 gatgattttcctttgtttttc 551
           |||||||||||||||||||||
Sbjct: 571 gatgattttcctttgtttttc 551
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>dbj|AP000859.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-17I22, complete
             sequences
          Length = 118455

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gagcgtgggcacggaggcggc 178
             |||||||||||||||||||||
Sbjct: 87831 gagcgtgggcacggaggcggc 87811
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 538     ttcctttgtttttcaaggct 557
               ||||||||||||||||||||
Sbjct: 1263514 ttcctttgtttttcaaggct 1263495
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>gb|U92828.1| Homo sapiens clone 429-7 CTG trinucleotide repeat gene, partial
           sequence
          Length = 141

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 489 ccacagcaggcagcagcagc 508
           ||||||||||||||||||||
Sbjct: 119 ccacagcaggcagcagcagc 138
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>gb|DQ479366.1| Phytolacca americana TM6-like protein (TM6-2) mRNA, partial cds
          Length = 831

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 gaaggtgaagaacctggagg 453
           ||||||||||||||||||||
Sbjct: 381 gaaggtgaagaacctggagg 400
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     gccgccgggttcacgaaggt 439
               ||||||||||||||||||||
Sbjct: 1498436 gccgccgggttcacgaaggt 1498455
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>gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0079N13, complete sequence
          Length = 140946

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gaccgcggccatgtcgccgg 259
             ||||||||||||||||||||
Sbjct: 14604 gaccgcggccatgtcgccgg 14623
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>gb|BC067923.2| Xenopus tropicalis discs, large homolog 7 (Drosophila), mRNA (cDNA
            clone MGC:69230 IMAGE:5307771), complete cds
          Length = 2959

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tttcctttgtttttcaaggc 556
            ||||||||||||||||||||
Sbjct: 2111 tttcctttgtttttcaaggc 2092
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>emb|AL513175.10| Human DNA sequence from clone RP11-142L4 on chromosome 1 Contains the
             3' end of the RGS18 gene for regulator of G-protein
             signalling 18 and two processed pseudogenes similar to
             ATP-binding cassette, sub-family E (OABP), member (ABCE1),
             complete sequence
          Length = 94175

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   ccacagcaggcagcagcagc 508
             ||||||||||||||||||||
Sbjct: 70580 ccacagcaggcagcagcagc 70599
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>emb|AL353641.9| Human DNA sequence from clone RP11-142P12 on chromosome 9, complete
             sequence
          Length = 35009

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   tgattttcctttgtttttca 552
             ||||||||||||||||||||
Sbjct: 12388 tgattttcctttgtttttca 12407
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     accgaccttgtcgccgccgg 427
               ||||||||||||||||||||
Sbjct: 3620491 accgaccttgtcgccgccgg 3620510
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>ref|NM_213673.2| Xenopus tropicalis discs, large homolog 7 (Drosophila) (dlg7), mRNA
          Length = 2959

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tttcctttgtttttcaaggc 556
            ||||||||||||||||||||
Sbjct: 2111 tttcctttgtttttcaaggc 2092
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>gb|BC099363.1| Xenopus laevis cDNA clone MGC:116559 IMAGE:6877338, complete cds
          Length = 1886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 tttcctttgtttttcaaggc 556
           ||||||||||||||||||||
Sbjct: 911 tttcctttgtttttcaaggc 892
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>dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, whole sequence
          Length = 45519

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ccgggttcacgaaggtgaag 443
             ||||||||||||||||||||
Sbjct: 13827 ccgggttcacgaaggtgaag 13808
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 355     acgaccggctcctcgtcggc 374
               ||||||||||||||||||||
Sbjct: 2280013 acgaccggctcctcgtcggc 2280032
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>gb|AC012404.9| Homo sapiens, clone RP11-39M21, complete sequence
          Length = 198857

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tgggctccctgggaagcaga 131
             ||||||||||||||||||||
Sbjct: 83420 tgggctccctgggaagcaga 83401
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>gb|DQ119137.1| Aplysia californica nonmuscle myosin II mRNA, partial cds
          Length = 5706

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  gaaggtgaagaacctggagg 453
            ||||||||||||||||||||
Sbjct: 4959 gaaggtgaagaacctggagg 4978
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 240      gaccgcggccatgtcgccgg 259
                ||||||||||||||||||||
Sbjct: 15762910 gaccgcggccatgtcgccgg 15762929
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      accgcggccatgtcgccgga 260
                ||||||||||||||||||||
Sbjct: 26209682 accgcggccatgtcgccgga 26209701
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>gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N2 map 15q21, complete sequence
          Length = 164868

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   acagcaggcagcagcagcca 510
             ||||||||||||||||||||
Sbjct: 20724 acagcaggcagcagcagcca 20743
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>gb|AC108112.2| Homo sapiens chromosome 5 clone RP11-267A15, complete sequence
          Length = 154752

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    tgggctccctgggaagcaga 131
              ||||||||||||||||||||
Sbjct: 133622 tgggctccctgggaagcaga 133641
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>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0453H04
          Length = 175047

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   accgcggccatgtcgccgga 260
             ||||||||||||||||||||
Sbjct: 74222 accgcggccatgtcgccgga 74241
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>ref|XM_550960.1| Anopheles gambiae str. PEST ENSANGP00000028899
           (ENSANGG00000017578), partial mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 acggcaaggagcgcaacctg 317
           ||||||||||||||||||||
Sbjct: 224 acggcaaggagcgcaacctg 243
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>ref|XM_321211.2| Anopheles gambiae str. PEST ENSANGP00000020067
           (ENSANGG00000017578), partial mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 acggcaaggagcgcaacctg 317
           ||||||||||||||||||||
Sbjct: 299 acggcaaggagcgcaacctg 318
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>emb|AJ326077.1|HSA326077 Homo sapiens genomic sequence surrounding NotI site, clone NR1-197R
          Length = 615

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 gaccgcggccatgtcgccgg 259
           ||||||||||||||||||||
Sbjct: 208 gaccgcggccatgtcgccgg 227
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 240      gaccgcggccatgtcgccgg 259
                ||||||||||||||||||||
Sbjct: 15850287 gaccgcggccatgtcgccgg 15850306
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 538     ttcctttgtttttcaaggct 557
               ||||||||||||||||||||
Sbjct: 1257552 ttcctttgtttttcaaggct 1257533


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,903,160
Number of Sequences: 3902068
Number of extensions: 3903160
Number of successful extensions: 86302
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85924
Number of HSP's gapped (non-prelim): 378
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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