Clone Name | bart40d06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GP107_MOUSE (Q8BUV8) Protein GPR107 precursor | 30 | 7.1 | 2 | GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transm... | 30 | 7.1 |
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>GP107_MOUSE (Q8BUV8) Protein GPR107 precursor| Length = 551 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = +1 Query: 424 FPISHPDE---YSLFFANCAPETAVTMEVRTDMYNTNLD--GSKDYLSVGQAPVPTIYAF 588 F IS D+ YSL+F C+ E + N + YLS G+ P+P +Y Sbjct: 208 FNISTDDQEGLYSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNSYLSAGEIPLPKLYVS 267 Query: 589 CAL 597 AL Sbjct: 268 MAL 270
>GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transmembrane| receptor 1) Length = 600 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +1 Query: 424 FPISHPDE---YSLFFANCA----PETAVTMEVRTDMYNTNLDGSKDYLSVGQAPVPTIY 582 F IS D+ YSL+F C P T + ++ N D YLS G+ P+P +Y Sbjct: 210 FNISTDDQEGLYSLYFHKCLGKELPSDKFTFSLDIEITEKNPDS---YLSAGEIPLPKLY 266 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,808,597 Number of Sequences: 219361 Number of extensions: 478479 Number of successful extensions: 1657 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1656 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)