Clone Name | bart40c10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y2605_MYCBO (P65020) Hypothetical protein Mb2605 | 30 | 3.6 | 2 | Y2575_MYCTU (P65019) Hypothetical protein Rv2575/MT2651 | 30 | 3.6 | 3 | CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22 | 30 | 4.7 |
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>Y2605_MYCBO (P65020) Hypothetical protein Mb2605| Length = 293 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +2 Query: 449 GRRPGGAQGVRGSGVRLQLQRD 514 GR GAQG GSGVR +LQ D Sbjct: 180 GRAQQGAQGAAGSGVRTELQAD 201
>Y2575_MYCTU (P65019) Hypothetical protein Rv2575/MT2651| Length = 293 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +2 Query: 449 GRRPGGAQGVRGSGVRLQLQRD 514 GR GAQG GSGVR +LQ D Sbjct: 180 GRAQQGAQGAAGSGVRTELQAD 201
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +2 Query: 5 PSSKATERDSGRRGASHRV--RTASEQASELNDRRHRHDVELRLQPRPVRVDDGG 163 PS ++ S R+G+ R R++S +A RRH LR QP P R D G Sbjct: 93 PSRRSVRSPSPRQGSPARRVDRSSSPRARSPPPRRHSRSPPLRGQPPPPRHRDAG 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,484,061 Number of Sequences: 219361 Number of extensions: 409259 Number of successful extensions: 2186 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2186 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)