ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40c10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61500 cggcgtggggcgggcgaggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 61559 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 ||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 61560 ggatctggggttcgggttcagctacgacgagatccccgagctctgcggcacgctcccggc 61619 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 61620 cctcgagctctgctactccatgag 61643 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 304 ccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcg 356 ||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 61355 ccgaggacgtgtggcgcggggcgcagtgggaggcggcgtggccgcggcgggcg 61407 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 gtggagctccgactccaaccgcgac 140 |||||||||||||||| |||||||| Sbjct: 61137 gtggagctccgactccgaccgcgac 61161
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9967719 cggcgtggggcgggcgaggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 9967778 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 ||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 9967779 ggatctggggttcgggttcagctacgacgagatccccgagctctgcggcacgctcccggc 9967838 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 9967839 cctcgagctctgctactccatgag 9967862 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | || Sbjct: 7724429 gacgacgacctggaggagctgaaggggtgcgtggatctcaggttcgggttcagctgcgac 7724370 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||| | |||||||| |||| |||| ||||||||| |||||||| Sbjct: 7724369 gtaatccctgagttctgcggcactgcccccgtgctcaagctctgctactccatga 7724315 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 304 ccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcg 356 ||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 9967574 ccgaggacgtgtggcgcggggcgcagtgggaggcggcgtggccgcggcgggcg 9967626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | |||| ||||||||||||||| ||| || || | Sbjct: 7724610 gaggccgaggacgtgtggtgcggggtacagttggaggcggcgtggccacggcggacgaag 7724551 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 7724550 ccggtggtg 7724542 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 gtggagctccgactccaaccgcgac 140 |||||||||||||||| |||||||| Sbjct: 9967356 gtggagctccgactccgaccgcgac 9967380
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10039416 cggcgtggggcgggcgaggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 10039475 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 ||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 10039476 ggatctggggttcgggttcagctacgacgagatccccgagctctgcggcacgctcccggc 10039535 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 10039536 cctcgagctctgctactccatgag 10039559 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | || Sbjct: 7794516 gacgacgacctggaggagctgaaggggtgcgtggatctcaggttcgggttcagctgcgac 7794457 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||| | |||||||| |||| |||| ||||||||| |||||||| Sbjct: 7794456 gtaatccctgagttctgcggcactgcccccgtgctcaagctctgctactccatga 7794402 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 304 ccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcg 356 ||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 10039271 ccgaggacgtgtggcgcggggcgcagtgggaggcggcgtggccgcggcgggcg 10039323 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | |||| ||||||||||||||| ||| || || | Sbjct: 7794697 gaggccgaggacgtgtggtgcggggtacagttggaggcggcgtggccacggcggacgaag 7794638 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 7794637 ccggtggtg 7794629 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 gtggagctccgactccaaccgcgac 140 |||||||||||||||| |||||||| Sbjct: 10039053 gtggagctccgactccgaccgcgac 10039077
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 182 bits (92), Expect = 8e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 7130151 cggcgtggggcgcgcgcggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 7130210 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 |||||| |||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 7130211 ggatctcgggttcgggttcagctacgacgagatccccgagctctgcggcacgcttccggc 7130270 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 7130271 tctcgagctctgctactccatgag 7130294 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggag 352 ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| | Sbjct: 7130001 ggaggcggaggccgaggaggtgtggcgcggggcacagtgggaggcggcgtggccgcggcg 7130060 Query: 353 ggcgcggccggtggtg 368 | || |||||||||| Sbjct: 7130061 gacgaagccggtggtg 7130076 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 4027207 tcgacgacggcgggcatctcctccttctcctcctcctc 4027170
>dbj|AK072568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I01, full insert sequence Length = 1174 Score = 182 bits (92), Expect = 8e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 394 cggcgtggggcgcgcgcggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 453 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 |||||| |||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 454 ggatctcgggttcgggttcagctacgacgagatccccgagctctgcggcacgcttccggc 513 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 514 tctcgagctctgctactccatgag 537 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggag 352 ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| | Sbjct: 244 ggaggcggaggccgaggaggtgtggcgcggggcacagtgggaggcggcgtggccgcggcg 303 Query: 353 ggcgcggccggtggtg 368 | || |||||||||| Sbjct: 304 gacgaagccggtggtg 319
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 182 bits (92), Expect = 8e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 7130030 cggcgtggggcgcgcgcggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 7130089 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 |||||| |||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 7130090 ggatctcgggttcgggttcagctacgacgagatccccgagctctgcggcacgcttccggc 7130149 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 7130150 tctcgagctctgctactccatgag 7130173 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggag 352 ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| | Sbjct: 7129880 ggaggcggaggccgaggaggtgtggcgcggggcacagtgggaggcggcgtggccgcggcg 7129939 Query: 353 ggcgcggccggtggtg 368 | || |||||||||| Sbjct: 7129940 gacgaagccggtggtg 7129955 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 4027194 tcgacgacggcgggcatctcctccttctcctcctcctc 4027157
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 182 bits (92), Expect = 8e-43 Identities = 131/144 (90%) Strand = Plus / Plus Query: 422 cggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgt 481 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 38451 cggcgtggggcgcgcgcggagcctgaccgacgacgacctggaggagctcaaggggtgcgt 38510 Query: 482 ggatctggggttcggcttcagctacaacgagatcccggagctgtgcggcaccctgcccgc 541 |||||| |||||||| ||||||||| |||||||||| ||||| |||||||| || || || Sbjct: 38511 ggatctcgggttcgggttcagctacgacgagatccccgagctctgcggcacgcttccggc 38570 Query: 542 gctcgagctctgctgctccatgag 565 ||||||||||||| ||||||||| Sbjct: 38571 tctcgagctctgctactccatgag 38594 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggag 352 ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| | Sbjct: 38301 ggaggcggaggccgaggaggtgtggcgcggggcacagtgggaggcggcgtggccgcggcg 38360 Query: 353 ggcgcggccggtggtg 368 | || |||||||||| Sbjct: 38361 gacgaagccggtggtg 38376
>ref|NM_190290.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 109 bits (55), Expect = 1e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 438 aggagcctgacggacgacgacctggaggagctcaaggggtgcgtggatctggggttcggc 497 |||||||||||||| || |||||||||||||||||||| ||| | || || |||||||| Sbjct: 181 aggagcctgacggaggaggacctggaggagctcaagggctgcctcgacctcgggttcggg 240 Query: 498 ttcagctacaacgagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgc 557 ||| |||| |||||||||| ||||||||||| || || || ||||| |||||||||| | Sbjct: 241 ttcgcctaccacgagatccccgagctgtgcgggacgctcccggcgctggagctctgctac 300 Query: 558 tccatga 564 ||||||| Sbjct: 301 tccatga 307
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 438 aggagcctgacggacgacgacctggaggagctcaaggggtgcgtggatctggggttcggc 497 |||||||||||||| || |||||||||||||||||||| ||| | || || |||||||| Sbjct: 39073041 aggagcctgacggaggaggacctggaggagctcaagggctgcctcgacctcgggttcggg 39073100 Query: 498 ttcagctacaacgagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgc 557 ||| |||| |||||||||| ||||||||||| || || || ||||| |||||||||| | Sbjct: 39073101 ttcgcctaccacgagatccccgagctgtgcgggacgctcccggcgctggagctctgctac 39073160 Query: 558 tccatga 564 ||||||| Sbjct: 39073161 tccatga 39073167 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/115 (85%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 451 acgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaacg 510 |||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||| ||| Sbjct: 27485351 acgacgacctagaggagctgaaggggtgcgtggatctcgggttcgggttcaactacgacg 27485410 Query: 511 agatcccggagctgtgcggcaccctg-cccgcgctcgagctctgctgctccatga 564 ||||| ||||| || ||| ||| |||| |||||||||||||| |||||||| Sbjct: 27485411 taatccccgagctctgtagca--ctgccccgtgctcgagctctgctactccatga 27485463 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 |||||||| || ||||||||||| | ||| ||||||||||||| || ||| || || | Sbjct: 27485172 gaggccgaagacgtgtggtgcggtgtacagcgggaggcggcgtgaccacgggggacgaag 27485231 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 27485232 ccggtggtg 27485240 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 38563861 cggaggtggaggtggaggaggcggaggc 38563834
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 109 bits (55), Expect = 1e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 438 aggagcctgacggacgacgacctggaggagctcaaggggtgcgtggatctggggttcggc 497 |||||||||||||| || |||||||||||||||||||| ||| | || || |||||||| Sbjct: 91021 aggagcctgacggaggaggacctggaggagctcaagggctgcctcgacctcgggttcggg 91080 Query: 498 ttcagctacaacgagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgc 557 ||| |||| |||||||||| ||||||||||| || || || ||||| |||||||||| | Sbjct: 91081 ttcgcctaccacgagatccccgagctgtgcgggacgctcccggcgctggagctctgctac 91140 Query: 558 tccatga 564 ||||||| Sbjct: 91141 tccatga 91147
>dbj|AK106757.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D08, full insert sequence Length = 1031 Score = 109 bits (55), Expect = 1e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 438 aggagcctgacggacgacgacctggaggagctcaaggggtgcgtggatctggggttcggc 497 |||||||||||||| || |||||||||||||||||||| ||| | || || |||||||| Sbjct: 153 aggagcctgacggaggaggacctggaggagctcaagggctgcctcgacctcgggttcggg 212 Query: 498 ttcagctacaacgagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgc 557 ||| |||| |||||||||| ||||||||||| || || || ||||| |||||||||| | Sbjct: 213 ttcgcctaccacgagatccccgagctgtgcgggacgctcccggcgctggagctctgctac 272 Query: 558 tccatga 564 ||||||| Sbjct: 273 tccatga 279
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 93.7 bits (47), Expect = 6e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| || Sbjct: 24319976 gacgacgacctggaggagctgaaggg-tgcgtggatctcgggttcgggttcagctacgac 24320034 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| ||||||| |||| |||||||||||||| |||||||| Sbjct: 24320035 gtaatccccgagctctgcggcattgcccccgtgctcgagctctgctactccatga 24320089
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 93.7 bits (47), Expect = 6e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| || Sbjct: 53169 gacgacgacctggaggagctgaaggg-tgcgtggatctcgggttcgggttcagctacgac 53227 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| ||||||| |||| |||||||||||||| |||||||| Sbjct: 53228 gtaatccccgagctctgcggcattgcccccgtgctcgagctctgctactccatga 53282
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 93.7 bits (47), Expect = 6e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| || Sbjct: 131527 gacgacgacctggaggagctgaaggg-tgcgtggatctcgggttcgggttcagctacgac 131585 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| ||||||| |||| |||||||||||||| |||||||| Sbjct: 131586 gtaatccccgagctctgcggcattgcccccgtgctcgagctctgctactccatga 131640
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | || Sbjct: 92526 gacgacgacctggaggagctgaaggggtgcgtggatctcaggttcgggttcagctgcgac 92585 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||| | |||||||| |||| |||| ||||||||| |||||||| Sbjct: 92586 gtaatccctgagttctgcggcactgcccccgtgctcaagctctgctactccatga 92640 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | |||| ||||||||||||||| ||| || || | Sbjct: 92345 gaggccgaggacgtgtggtgcggggtacagttggaggcggcgtggccacggcggacgaag 92404 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 92405 ccggtggtg 92413
>dbj|AK120678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162H21, full insert sequence Length = 1558 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | || Sbjct: 872 gacgacgacctggaggagctgaaggggtgcgtggatctcaggttcgggttcagctgcgac 931 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||| | |||||||| |||| |||| ||||||||| |||||||| Sbjct: 932 gtaatccctgagttctgcggcactgcccccgtgctcaagctctgctactccatga 986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | |||| ||||||||||||||| ||| || || | Sbjct: 691 gaggccgaggacgtgtggtgcggggtacagttggaggcggcgtggccacggcggacgaag 750 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 751 ccggtggtg 759
>dbj|AP004145.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047F09 Length = 79652 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/115 (85%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 451 acgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaacg 510 |||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||| ||| Sbjct: 75240 acgacgacctagaggagctgaaggggtgcgtggatctcgggttcgggttcaactacgacg 75299 Query: 511 agatcccggagctgtgcggcaccctg-cccgcgctcgagctctgctgctccatga 564 ||||| ||||| || ||| ||| |||| |||||||||||||| |||||||| Sbjct: 75300 taatccccgagctctgtagca--ctgccccgtgctcgagctctgctactccatga 75352 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 |||||||| || ||||||||||| | ||| ||||||||||||| || ||| || || | Sbjct: 75061 gaggccgaagacgtgtggtgcggtgtacagcgggaggcggcgtgaccacgggggacgaag 75120 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 75121 ccggtggtg 75129
>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1125_C04 Length = 98476 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/115 (85%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 451 acgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaacg 510 |||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||| ||| Sbjct: 6054 acgacgacctagaggagctgaaggggtgcgtggatctcgggttcgggttcaactacgacg 6113 Query: 511 agatcccggagctgtgcggcaccctg-cccgcgctcgagctctgctgctccatga 564 ||||| ||||| || ||| ||| |||| |||||||||||||| |||||||| Sbjct: 6114 taatccccgagctctgtagca--ctgccccgtgctcgagctctgctactccatga 6166 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 |||||||| || ||||||||||| | ||| ||||||||||||| || ||| || || | Sbjct: 5875 gaggccgaagacgtgtggtgcggtgtacagcgggaggcggcgtgaccacgggggacgaag 5934 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 5935 ccggtggtg 5943
>dbj|AK109750.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F07, full insert sequence Length = 1592 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/115 (85%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 451 acgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaacg 510 |||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||| ||| Sbjct: 522 acgacgacctagaggagctgaaggggtgcgtggatctcgggttcgggttcaactacgacg 463 Query: 511 agatcccggagctgtgcggcaccctg-cccgcgctcgagctctgctgctccatga 564 ||||| ||||| || ||| ||| |||| |||||||||||||| |||||||| Sbjct: 462 taatccccgagctctgtagca--ctgccccgtgctcgagctctgctactccatga 410 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Minus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 |||||||| || ||||||||||| | ||| ||||||||||||| || ||| || || | Sbjct: 701 gaggccgaagacgtgtggtgcggtgtacagcgggaggcggcgtgaccacgggggacgaag 642 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 641 ccggtggtg 633
>ref|XM_450660.1| Oryza sativa (japonica cultivar-group), mRNA Length = 414 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||| ||||||||||| | ||||||||||||||||| ||||||| ||| ||||| || Sbjct: 319 gacgacaacctggaggagttgaaggggtgcgtggatctcgggttcgagttccgctacgac 260 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| | ||| || |||| |||||||||||||| |||||||| Sbjct: 259 gtaatccccgagctctacggtactgcccccgtgctcgagctctgctactccatga 205
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||| ||||||||||| | ||||||||||||||||| ||||||| ||| ||||| || Sbjct: 12065585 gacgacaacctggaggagttgaaggggtgcgtggatctcgggttcgagttccgctacgac 12065644 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| | ||| || |||| |||||||||||||| |||||||| Sbjct: 12065645 gtaatccccgagctctacggtactgcccccgtgctcgagctctgctactccatga 12065699 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | ||||||||||||||||||| ||| || || | Sbjct: 12065404 gaggccgaggacgtgtggtgcggggtatagtgggaggcggcgtggccacggcggacgaag 12065463 Query: 360 ccggtggtgctggcc 374 ||||||||| ||||| Sbjct: 12065464 ccggtggtggtggcc 12065478 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gcgtcgacgacggcggccac 166 |||||||||||||||||||| Sbjct: 7737026 gcgtcgacgacggcggccac 7737007
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttcagctacaac 509 |||||| ||||||||||| | ||||||||||||||||| ||||||| ||| ||||| || Sbjct: 170065 gacgacaacctggaggagttgaaggggtgcgtggatctcgggttcgagttccgctacgac 170124 Query: 510 gagatcccggagctgtgcggcaccctgcccgcgctcgagctctgctgctccatga 564 | ||||| ||||| | ||| || |||| |||||||||||||| |||||||| Sbjct: 170125 gtaatccccgagctctacggtactgcccccgtgctcgagctctgctactccatga 170179 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 ||||||||||| ||||||||||| | ||||||||||||||||||| ||| || || | Sbjct: 169884 gaggccgaggacgtgtggtgcggggtatagtgggaggcggcgtggccacggcggacgaag 169943 Query: 360 ccggtggtgctggcc 374 ||||||||| ||||| Sbjct: 169944 ccggtggtggtggcc 169958
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 423 ggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgtg 482 |||||||||||||| | ||| |||| |||| |||||||||||||| |||||||| ||| Sbjct: 4081 ggcgtggggcgcgcgcgtagcttgaccaacgatgacctggaggagctgaaggggtgtgtg 4140 Query: 483 gatctggggttcggcttcagctacaacgagatccc 517 ||| | ||| ||| ||||||||| |||| ||||| Sbjct: 4141 gatattgggatcgtgttcagctacgacgaaatccc 4175 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 294 gaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcgg 350 ||||| |||| |||||| |||||| |||| | ||||||||||||||||||| |||| Sbjct: 3962 gaggccgaggacgaggacgtgtggcgcggggtacagtgggaggcggcgtggctgcgg 4018
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 423 ggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgtg 482 |||||||||||||| | ||| |||| |||| |||||||||||||| |||||||| ||| Sbjct: 3099642 ggcgtggggcgcgcgcgtagcttgaccaacgatgacctggaggagctgaaggggtgtgtg 3099701 Query: 483 gatctggggttcggcttcagctacaacgagatccc 517 ||| | ||| ||| ||||||||| |||| ||||| Sbjct: 3099702 gatattgggatcgtgttcagctacgacgaaatccc 3099736 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 294 gaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcgg 350 ||||| |||| |||||| |||||| |||| | ||||||||||||||||||| |||| Sbjct: 3099523 gaggccgaggacgaggacgtgtggcgcggggtacagtgggaggcggcgtggctgcgg 3099579 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 24684900 ggaggcggaggtggtggaggcggaggcggagg 24684869
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 423 ggcgtggggcgcgccaggagcctgacggacgacgacctggaggagctcaaggggtgcgtg 482 |||||||||||||| | ||| |||| |||| |||||||||||||| |||||||| ||| Sbjct: 160717 ggcgtggggcgcgcgcgtagcttgaccaacgatgacctggaggagctgaaggggtgtgtg 160776 Query: 483 gatctggggttcggcttcagctacaacgagatccc 517 ||| | ||| ||| ||||||||| |||| ||||| Sbjct: 160777 gatattgggatcgtgttcagctacgacgaaatccc 160811 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 294 gaggcggaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcgg 350 ||||| |||| |||||| |||||| |||| | ||||||||||||||||||| |||| Sbjct: 160598 gaggccgaggacgaggacgtgtggcgcggggtacagtgggaggcggcgtggctgcgg 160654
>gb|AC115750.9| Mus musculus chromosome 10, clone RP23-16F5, complete sequence Length = 228071 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgaggagg 312 |||||||||||| ||||||||||||||| ||||||| Sbjct: 204350 cggaggcggaggcagaggaggcggaggcagaggagg 204385 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 ||||||||||| ||||||||||||||| |||| Sbjct: 204366 ggaggcggaggcagaggaggcggaggcagagg 204397
>gb|AC159911.7| Mus musculus 10 BAC RP23-465M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgaggagg 312 |||||||||||| ||||||||||||||| ||||||| Sbjct: 11050 cggaggcggaggcagaggaggcggaggcagaggagg 11085 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 ||||||||||| ||||||||||||||| |||| Sbjct: 11066 ggaggcggaggcagaggaggcggaggcagagg 11097
>gb|AY596562.1| Saccharum officinarum clone SCQSLR1089D08, complete sequence Length = 965 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 447 acggacgacgacctggaggagctcaaggggtgcgtggatctggggttcggcttc 500 |||||||||||||| || |||||| |||||| | |||||||||||||||||| Sbjct: 269 acggacgacgacctcgacgagctccgcgggtgcatcgatctggggttcggcttc 322
>gb|BC022220.1| Homo sapiens AE binding protein 2, mRNA (cDNA clone MGC:17922 IMAGE:3914323), complete cds Length = 3629 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| ||||| |||||||||||||||||||| |||| Sbjct: 127 ggaggaggaggaagaggaggcggaggccgaggcggtg 163
>ref|NM_153207.3| Homo sapiens AE binding protein 2 (AEBP2), mRNA Length = 4072 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| ||||| |||||||||||||||||||| |||| Sbjct: 127 ggaggaggaggaagaggaggcggaggccgaggcggtg 163
>dbj|AK131361.1| Homo sapiens cDNA FLJ16400 fis, clone TUTER2000057, moderately similar to Mus musculus AE-1 binding protein AEBP2 mRNA Length = 2235 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| ||||| |||||||||||||||||||| |||| Sbjct: 152 ggaggaggaggaagaggaggcggaggccgaggcggtg 188
>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177115 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| ||||| |||||||||||||||||||| |||| Sbjct: 107711 ggaggaggaggaagaggaggcggaggccgaggcggtg 107675
>gb|AF263245.1|AF263245 Micromonospora megalomicea subsp. nigra megalomicin biosynthetic gene cluster, partial sequence Length = 47981 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 361 cggtggtgctggccggggaggacggcccg 389 |||||||||||||||||||| |||||||| Sbjct: 35857 cggtggtgctggccggggagaacggcccg 35885
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| ||||||||||||||| |||| Sbjct: 113225 cggaggcggaggcagaggaggcggaggcggagg 113257
>gb|AC102398.12| Mus musculus chromosome 8, clone RP24-213P1, complete sequence Length = 172457 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 116721 ccggaggcggaggaggaggaggcggaggcggagaaggtg 116759
>gb|AY373262.1| Chlamydomonas reinhardtii radial spoke protein 2 mRNA, complete cds Length = 2753 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggagg 312 ||||||||||| ||||||| |||||||||||||| Sbjct: 1268 ggaggcggaggaggaggaggaggaggccgaggagg 1302
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 460 tggaggagctcaaggggtgcgtg 482 ||||||||||||||||||||||| Sbjct: 54837 tggaggagctcaaggggtgcgtg 54815
>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence Length = 159969 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggagg 312 |||||||||||| |||||||||| ||| ||||||| Sbjct: 148502 ggaggcggaggtggaggaggcggcggcggaggagg 148468
>dbj|AK160434.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700127H18 product:guanine nucleotide binding protein, alpha o, full insert sequence Length = 936 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 274 ccggaggcggaggaggaggaggcggaggcggagaaggtg 236
>dbj|AK035907.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630017D09 product:guanine nucleotide binding protein, alpha o, full insert sequence Length = 2788 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 72 ccggaggcggaggaggaggaggcggaggcggagaaggtg 34
>gb|U12017.1|MMU12017 Mus musculus GTP-binding protein (alpha-o) gene, 5' region Length = 1365 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 934 ccggaggcggaggaggaggaggcggaggcggagaaggtg 896
>gb|L34216.1|MUSGBPAA Mus musculus GTP-binding protein alpha-o subunit gene, 5' end Length = 1365 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 934 ccggaggcggaggaggaggaggcggaggcggagaaggtg 896
>gb|M55437.1|CRUGNAO1 Hamster G-o alpha subunit mRNA Length = 673 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||||||||||| |||||||||||||| ||| ||||| Sbjct: 242 ccggaggcggaggaggaggaggcggaggcggagaaggtg 204
>ref|NM_197195.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.5), mRNA Length = 1381 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cgtcgacgacggcggccacctc 169 |||||||||||||||||||||| Sbjct: 651 cgtcgacgacggcggccacctc 672
>ref|XM_869898.1| PREDICTED: Bos taurus similar to TRAF and TNF receptor-associated protein, transcript variant 2 (LOC507579), mRNA Length = 1976 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 276 ccggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| ||||||||| |||| |||||| Sbjct: 145 ccggaggcggagctagaggagggggagcccgagg 178
>gb|AC142270.4| Mus musculus BAC clone RP24-115G23 from chromosome 3, complete sequence Length = 170870 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 56730 cctcctccctgtcctcctcctc 56709
>ref|XM_589603.2| PREDICTED: Bos taurus similar to MTERF domain containing 2 (LOC512153), mRNA Length = 3580 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 1069 cctcctccctgtcctcctcctc 1048
>gb|DQ483941.1| Gymnogyps californianus clone 107G microsatellite sequence Length = 520 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 ||||| |||||||||||||| |||||| |||||| Sbjct: 477 ggaggaggaggtagaggaggaggaggcggaggag 510
>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence Length = 191541 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 172719 cctcctccctgtcctcctcctc 172698
>gb|AC121566.3| Mus musculus BAC clone RP23-225D10 from 1, complete sequence Length = 152435 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 24650 cctcctccctgtcctcctcctc 24629
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cgtcgacgacggcggccacctc 169 |||||||||||||||||||||| Sbjct: 42351 cgtcgacgacggcggccacctc 42372
>ref|XM_723414.1| Plasmodium yoelii yoelii str. 17XNL multidomain scavenger receptor protein PbSR precursor (PY01071) partial mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggagg 303 ||||||||||| |||||||||||||| Sbjct: 4066 ggaggcggaggaagaggaggcggagg 4091
>gb|AC109805.8| Mus musculus chromosome 3, clone RP23-91D14, complete sequence Length = 171006 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 54848 cctcctccctgtcctcctcctc 54827
>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence Length = 228648 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 9060 cctcctccctgtcctcctcctc 9081
>emb|AL161637.13| Human DNA sequence from clone RP3-393B19 on chromosome 1p33-34.3 Contains a CpG island, complete sequence Length = 101954 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 19522 cctcctccctgtcctcctcctc 19543
>emb|AL591376.11| Mouse DNA sequence from clone RP23-404C20 on chromosome 11 Contains the 5' end of the Nlk gene for nemo like kinase, a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene and a novel gene, complete sequence Length = 141489 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 79533 cctcctccctgtcctcctcctc 79512
>gb|AC118558.2| Homo sapiens chromosome 1 clone RP11-524M5, complete sequence Length = 51825 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 33327 cctcctccctgtcctcctcctc 33306
>gb|AC093275.3| Homo sapiens chromosome 5 clone RP11-379A13, complete sequence Length = 170823 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcctca 188 |||||||||||||||||||||| Sbjct: 109925 ctcctccctgtcctcctcctca 109904
>gb|BC104566.1| Bos taurus cDNA clone IMAGE:8120054, partial cds Length = 1583 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 1004 cctcctccctgtcctcctcctc 983
>dbj|AK164766.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730018F15 product:hypothetical protein, full insert sequence Length = 2935 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 |||||||||||| |||||||| ||||| |||||| Sbjct: 2489 ggaggcggaggtggaggaggcagaggcagaggag 2456
>gb|AC154403.2| Mus musculus BAC clone RP24-239F20 from chromosome 16, complete sequence Length = 131387 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 |||||||||||| |||||||| ||||| |||||| Sbjct: 126669 ggaggcggaggtggaggaggcagaggcagaggag 126636 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 |||||||||||| |||||||| ||||| |||||| Sbjct: 124153 ggaggcggaggtggaggaggcagaggcagaggag 124120
>ref|NM_030997.1| Rattus norvegicus VGF nerve growth factor inducible (Vgf), mRNA Length = 2636 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 1489 cggaggcggaggcagaggaggcggag 1514
>ref|NM_001039385.1| Mus musculus VGF nerve growth factor inducible (Vgf), mRNA Length = 2553 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 1359 cggaggcggaggcagaggaggcggag 1384
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cgtcgacgacggcggccacctc 169 |||||||||||||||||||||| Sbjct: 18539340 cgtcgacgacggcggccacctc 18539361
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggaggtg 314 |||||||||||||||||||||| Sbjct: 1448224 ggaggcggaggccgaggaggtg 1448203 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggagg 297 |||||||||||||||||||| Sbjct: 1686048 ggaggcggaggtagaggagg 1686067
>dbj|AK120612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151J15, full insert sequence Length = 1945 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 163 tcgacgacggcgggcatctcctccttctcctcctcctc 126
>dbj|AK073945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073N02, full insert sequence Length = 2864 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 163 tcgacgacggcgggcatctcctccttctcctcctcctc 126
>dbj|AK068305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146K12, full insert sequence Length = 1885 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 175 tcgacgacggcgggcatctcctccttctcctcctcctc 138
>dbj|AK061011.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B02, full insert sequence Length = 1065 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cgtcgacgacggcggccacctc 169 |||||||||||||||||||||| Sbjct: 342 cgtcgacgacggcggccacctc 363
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cgtcgacgacggcggccacctc 169 |||||||||||||||||||||| Sbjct: 18549393 cgtcgacgacggcggccacctc 18549414
>emb|AL929372.16| Mouse DNA sequence from clone RP23-461G6 on chromosome 2, complete sequence Length = 170342 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 104305 cctcctccctgtcctcctcctc 104326
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 150 tcgacgacggcggccacctcctccctgtcctcctcctc 187 ||||||||||||| || ||||||| | ||||||||||| Sbjct: 63628 tcgacgacggcgggcatctcctccttctcctcctcctc 63591
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggaggtg 314 |||||||||||||||||||||| Sbjct: 1125312 ggaggcggaggccgaggaggtg 1125291 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggagg 297 |||||||||||||||||||| Sbjct: 1374281 ggaggcggaggtagaggagg 1374300
>emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chromosome 16, complete sequence Length = 159420 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 |||||||||||| |||||||| ||||| |||||| Sbjct: 137582 ggaggcggaggtggaggaggcagaggcagaggag 137549 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgaggag 311 |||||||||||| |||||||| ||||| |||||| Sbjct: 135081 ggaggcggaggtggaggaggcagaggcagaggag 135048
>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence Length = 177652 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 110501 cggaggcggaggcagaggaggcggag 110476
>gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complete sequence Length = 246976 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 14846 cctcctccctgtcctcctcctc 14867
>gb|AC133202.3| Mus musculus BAC clone RP23-83P19 from 8, complete sequence Length = 150932 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 44896 cctcctccctgtcctcctcctc 44875
>emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on chromosome 2, complete sequence Length = 209967 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 162268 cctcctccctgtcctcctcctc 162247 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 162244 cctcctccctgtcctcctcctc 162223 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 162220 cctcctccctgtcctcctcctc 162199 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 162196 cctcctccctgtcctcctcctc 162175 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctc 187 |||||||||||||||||||||| Sbjct: 162169 cctcctccctgtcctcctcctc 162148
>gb|M60525.1|RATNGFA Rat nerve growth factor inducible protein (VGF) mRNA, complete cds Length = 2556 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 1409 cggaggcggaggcagaggaggcggag 1434
>gb|M74223.1|RATVGFA Rat VGF mRNA, complete cds Length = 2507 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 1355 cggaggcggaggcagaggaggcggag 1380
>gb|M60522.1|RATNGFIP Rat nerve growth factor-inducible protein (VGF) gene, complete cds Length = 3935 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggag 302 |||||||||||| ||||||||||||| Sbjct: 2728 cggaggcggaggcagaggaggcggag 2753
>gb|AY093416.1| Zea mays DNA methyltransferase 105 (dmt105) mRNA, complete cds Length = 2996 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggag 311 ||||||||||||||||||||| Sbjct: 328 gaggaggcggaggccgaggag 348
>ref|XM_483028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 cgcgtcgacgacggcggccacctcctccc 174 |||| ||||| |||||||||||||||||| Sbjct: 201 cgcggcgacgtcggcggccacctcctccc 173
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgtcgacgacggcggccacct 168 ||||||||||||||||||||| Sbjct: 35832 cgtcgacgacggcggccacct 35812 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 acgaccgccgccaccgccac 112 |||||||||||||||||||| Sbjct: 1959134 acgaccgccgccaccgccac 1959153
>ref|XM_463407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 300 gaggccgaggaggtgtggtgcggcgcgcagtgggaggcggcgtggccgcggagggcgcgg 359 |||||||| || ||||||||||| | ||| ||||||||||||| || ||| || || | Sbjct: 422 gaggccgaagacgtgtggtgcggtgtacagcgggaggcggcgtgaccacgggggacgaag 481 Query: 360 ccggtggtg 368 ||||||||| Sbjct: 482 ccggtggtg 490 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 cccgcgctcgagctctgctgctccatga 564 |||| |||||||||||||| |||||||| Sbjct: 572 cccgtgctcgagctctgctactccatga 599
>ref|NM_031877.2| Mus musculus WASP family 1 (Wasf1), mRNA Length = 2574 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 1370 aggcggaggtagaggaggcgg 1350
>ref|NM_009276.1| Mus musculus simple repeat sequence-containing transcript (Srst), mRNA Length = 1263 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| ||||||||| ||||| |||| Sbjct: 129 cggaggcggaggcagaggaggcagaggcagagg 161
>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence Length = 185353 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 acagcgagcgagcaggccagcgagc 89 |||||||||||||| |||||||||| Sbjct: 29291 acagcgagcgagcaagccagcgagc 29315
>ref|XM_359973.1| Magnaporthe grisea 70-15 hypothetical protein (MG05348.4) partial mRNA Length = 918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 gcctgacggacgacgacctgg 462 ||||||||||||||||||||| Sbjct: 326 gcctgacggacgacgacctgg 346
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cggcgccggaccgggcgcggg 415 ||||||||||||||||||||| Sbjct: 1200844 cggcgccggaccgggcgcggg 1200864
>gb|BC016896.1| Mus musculus WASP family 1, mRNA (cDNA clone MGC:18888 IMAGE:4239038), complete cds Length = 2520 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 1367 aggcggaggtagaggaggcgg 1347
>gb|BC053423.1| Mus musculus WASP family 1, mRNA (cDNA clone MGC:59255 IMAGE:6509953), complete cds Length = 2574 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 1370 aggcggaggtagaggaggcgg 1350
>gb|AY301275.1| Anopheles gambiae G-protein coupled receptor mRNA, complete cds Length = 2989 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggaggtgt 315 |||||||||||||| |||||||||| Sbjct: 1961 gaggaggcggaggcggaggaggtgt 1985
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgtcgacgacggcggccacct 168 ||||||||||||||||||||| Sbjct: 4535 cgtcgacgacggcggccacct 4515
>gb|AF228729.3| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete sequence Length = 101448 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 34705 ctcctccctgtcctcctcctc 34725
>gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete sequence Length = 146199 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 64156 ctcctccctgtcctcctcctc 64176
>gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosome 13, complete sequence Length = 189739 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 ggaggtagaggaggcggaggccgaggagg 312 |||||||||||||| |||||| ||||||| Sbjct: 76721 ggaggtagaggaggaggaggcggaggagg 76749
>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence Length = 235276 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 acagcgagcgagcaggccagcgagc 89 |||||||||||||| |||||||||| Sbjct: 215545 acagcgagcgagcaagccagcgagc 215569
>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence Length = 212595 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 caaagcaacagagagagacag 33 ||||||||||||||||||||| Sbjct: 30553 caaagcaacagagagagacag 30573
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggaggt 313 ||||||||||||||||||||| Sbjct: 217190 ggaggcggaggccgaggaggt 217170
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggaggtgt 315 |||||||||||||| |||||||||| Sbjct: 56016 gaggaggcggaggcggaggaggtgt 56040
>gb|AC104989.11| Homo sapiens chromosome 8, clone RP11-769N21, complete sequence Length = 181644 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 160162 ctcctccctgtcctcctcctc 160142
>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence Length = 126083 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 ccacctcctccctgtcctcctcctc 187 ||||||||||||| ||||||||||| Sbjct: 80292 ccacctcctccctctcctcctcctc 80316
>gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, complete sequence Length = 170211 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 16714 ctcctccctgtcctcctcctc 16694
>gb|AF467773.1| Mus musculus Wave1/Scar (Wave1) mRNA, complete cds Length = 2005 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 1305 aggcggaggtagaggaggcgg 1285
>gb|AC154607.2| Mus musculus BAC clone RP23-331D17 from chromosome 16, complete sequence Length = 202496 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| ||||||||| ||||| |||| Sbjct: 144900 cggaggcggaggcagaggaggcagaggcagagg 144932
>dbj|AB206807.1| Uncultured bacterium P450 gene for cytochrome P450 alkane hydroxylase, partial cds, clone:Kuji003 Length = 816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tggaggagctcaaggggtgcg 480 ||||||||||||||||||||| Sbjct: 305 tggaggagctcaaggggtgcg 325
>dbj|AB206806.1| Uncultured bacterium P450 gene for cytochrome P450 alkane hydroxylase, partial cds, clone:Kuji002 Length = 816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tggaggagctcaaggggtgcg 480 ||||||||||||||||||||| Sbjct: 305 tggaggagctcaaggggtgcg 325
>gb|AC087792.7| Homo sapiens chromosome 8, clone RP1-16A9, complete sequence Length = 101448 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 66744 ctcctccctgtcctcctcctc 66724
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 381 gacggcccgccggacggcgccggac 405 ||||||||||||| ||||||||||| Sbjct: 707666 gacggcccgccgggcggcgccggac 707690
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 cgcgtcgacgacggcggccacctcctccc 174 |||| ||||| |||||||||||||||||| Sbjct: 23944726 cgcggcgacgtcggcggccacctcctccc 23944698 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 6266060 cggaggcggaggaagaggaggccgaggc 6266033
>gb|AY027539.1| Zea mays chromomethylase (Zmet5) mRNA, complete cds Length = 3156 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggag 311 ||||||||||||||||||||| Sbjct: 354 gaggaggcggaggccgaggag 374
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 cgcggccggtggtgctggccg 375 ||||||||||||||||||||| Sbjct: 2803163 cgcggccggtggtgctggccg 2803143 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 cgcggccggtggtgctggccg 375 ||||||||||||||||||||| Sbjct: 2803031 cgcggccggtggtgctggccg 2803011 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 7943005 ggaggcggaggccgaggagg 7942986
>gb|AF290877.1|AF290877 Mus musculus WAVE-1 mRNA, complete cds Length = 2469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 1305 aggcggaggtagaggaggcgg 1285
>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence Length = 123934 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 113390 ctcctccctgtcctcctcctc 113410
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 353 ggcgcggccggtggtgctggccggg 377 ||||||||||||||||| ||||||| Sbjct: 1740686 ggcgcggccggtggtgcgggccggg 1740710 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cggcccgccggacggcgccg 402 |||||||||||||||||||| Sbjct: 916208 cggcccgccggacggcgccg 916189
>gb|AC007661.2|AC007661 Arabidopsis thaliana chromosome II section 205 of 255 of the complete sequence. Sequence from clones F13M22, T8P21, F16M14 Length = 95612 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggccgaggaggt 313 |||||| ||||| |||||||||||||| |||||||| Sbjct: 12451 cggaggaggaggaggaggaggcggaggcggaggaggt 12415
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 cgcgtcgacgacggcggccacctcctccc 174 |||| ||||| |||||||||||||||||| Sbjct: 77877 cgcggcgacgtcggcggccacctcctccc 77849
>gb|AC004093.1|AC004093 Mus musculus (129SV) DNA, unmapped BAC 10817, complete sequence Length = 157684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctcctccctgtcctcctcctc 187 ||||||||||||||||||||| Sbjct: 73647 ctcctccctgtcctcctcctc 73667
>ref|XM_321555.1| Anopheles gambiae str. PEST ENSANGP00000018165 (ENSANGG00000015676), partial mRNA Length = 1839 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggaggtgt 315 |||||||||||||| |||||||||| Sbjct: 1679 gaggaggcggaggcggaggaggtgt 1703
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| |||||||||||||| ||||| ||||||||| Sbjct: 197618 ggaggtggaggtagaggaggtggaggtggaggaggtg 197654 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggtg 314 ||||| |||||||||||||| ||||| ||||||||| Sbjct: 197495 ggaggtggaggtagaggaggtggaggtggaggaggtg 197531
>gb|AC174452.2| Mus musculus BAC clone RP23-113E17 from chromosome 10, complete sequence Length = 229159 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 60234 aggcggaggtagaggaggcgg 60254
>gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosome 10, complete sequence Length = 166451 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 aggcggaggtagaggaggcgg 300 ||||||||||||||||||||| Sbjct: 106758 aggcggaggtagaggaggcgg 106778
>gb|AC145942.4| Gallus gallus BAC clone CH261-21I23 from chromosome unknown, complete sequence Length = 228603 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 ccacctcctccctgtcctcctcctc 187 ||||||||||| ||||||||||||| Sbjct: 31269 ccacctcctccttgtcctcctcctc 31293
>emb|AL808124.12| Mouse DNA sequence from clone RP23-146I4 on chromosome X, complete sequence Length = 162375 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 ccacctcctccctgtcctcctcctc 187 ||||||||||||| ||||||||||| Sbjct: 16891 ccacctcctccctctcctcctcctc 16867
>emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chromosome 4, complete sequence Length = 213303 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgagga 310 ||||||||||| |||||||| |||||| ||||| Sbjct: 94663 ggaggcggaggcagaggaggaggaggcagagga 94631
>emb|X67863.1|MMT2 M.musculus T2 mRNA Length = 1263 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| ||||||||| ||||| |||| Sbjct: 129 cggaggcggaggcagaggaggcagaggcagagg 161
>gb|M33662.1|CRUHITAO2 Hamster G-o protein alpha subunit 2 mRNA, complete cds Length = 1678 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggc 304 ||||||||||||| |||||||||||||| Sbjct: 29 ccggaggcggaggaggaggaggcggaggc 1
>gb|M33661.1|CRUHITAO1 Hamster G-o protein alpha subunit 1 (GNAO I) mRNA, complete cds Length = 1581 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 ccggaggcggaggtagaggaggcggaggc 304 ||||||||||||| |||||||||||||| Sbjct: 29 ccggaggcggaggaggaggaggcggaggc 1
>gb|AC115795.11| Mus musculus chromosome 5, clone RP23-400O10, complete sequence Length = 207103 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 34972 cctcctccctgtcctcctcc 34991
>gb|AC166650.7| Mus musculus chromosome 5, clone RP23-434O9, complete sequence Length = 207176 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 aaagcaacagagagagacag 33 |||||||||||||||||||| Sbjct: 68250 aaagcaacagagagagacag 68269
>ref|XM_512119.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA C230094B15 (LOC455405), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 222 cttcagctacaacgagatcc 241
>ref|XM_507164.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E04.12 mRNA Length = 1820 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 191 cggaggcggaggaagaggaggccgaggc 164
>ref|XM_480624.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1820 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 191 cggaggcggaggaagaggaggccgaggc 164
>ref|XM_475203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acgacggcggccacctcctc 172 |||||||||||||||||||| Sbjct: 104 acgacggcggccacctcctc 123
>gb|AC166649.5| Mus musculus chromosome 5, clone RP23-379D24, complete sequence Length = 176315 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aaagcaacagagagagacag 33 |||||||||||||||||||| Sbjct: 157430 aaagcaacagagagagacag 157411
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 36 cggaggtggaggtggaggaggcggaggc 63
>ref|XM_479014.1| Oryza sativa (japonica cultivar-group), mRNA Length = 288 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gacgacgacctggaggagct 469 |||||||||||||||||||| Sbjct: 267 gacgacgacctggaggagct 286
>ref|XM_473013.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 214 ggaggcggaggtggtggaggcggaggcggagg 245
>ref|NM_001008423.1| Mus musculus gene model 1568, (NCBI) (Gm1568), mRNA Length = 4032 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 454 ggaggcggaggccgaggagg 435
>gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, complete sequence Length = 206043 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 67556 gaggaggaggaagaggaggcggtggccgaggtggtg 67591
>gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, complete sequence Length = 249620 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggagg 297 |||||||||||||||||||| Sbjct: 29548 ggaggcggaggtagaggagg 29529
>gb|AC109283.8| Mus musculus chromosome 1, clone RP24-156F3, complete sequence Length = 133845 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 catccagcaaagcaacagag 25 |||||||||||||||||||| Sbjct: 73692 catccagcaaagcaacagag 73673
>gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, complete sequence Length = 142124 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 catccagcaaagcaacagag 25 |||||||||||||||||||| Sbjct: 36563 catccagcaaagcaacagag 36544
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 acgacggcggccacctcctc 172 |||||||||||||||||||| Sbjct: 13040 acgacggcggccacctcctc 13021
>gb|AY705085.1| Mesocricetus auratus early growth response protein 1 (Egr1), partial cds Length = 755 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cggccacctcctccctgtcctcct 183 |||||||||||||||| ||||||| Sbjct: 19 cggccacctcctccctctcctcct 42
>ref|XM_617975.2| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 1 (LOC537791), mRNA Length = 3295 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggaggtg 314 ||||||||||||||||||| |||| Sbjct: 156 gaggaggcggaggccgaggcggtg 179
>ref|XM_875665.1| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 2 (LOC537791), mRNA Length = 4617 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgaggaggtg 314 ||||||||||||||||||| |||| Sbjct: 136 gaggaggcggaggccgaggcggtg 159
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggcggaggtagaggaggcgg 300 |||||||||||||||||||| Sbjct: 36234 ggcggaggtagaggaggcgg 36215
>ref|XM_610370.2| PREDICTED: Bos taurus similar to tripartite motif-containing 9 (LOC531867), mRNA Length = 1800 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 ctcctccctgtcctcctcctcaagctcc 194 |||||| |||||||| |||||||||||| Sbjct: 336 ctcctcgctgtcctcgtcctcaagctcc 363
>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence Length = 221662 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 193672 ggaggcggaggccgaggagg 193691
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 acgacggcggccacctcctc 172 |||||||||||||||||||| Sbjct: 130862 acgacggcggccacctcctc 130843
>gb|AC163328.6| Mus musculus chromosome 5, clone RP24-405J8, complete sequence Length = 141045 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 aaagcaacagagagagacag 33 |||||||||||||||||||| Sbjct: 23364 aaagcaacagagagagacag 23383
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccgcgtcgacgacggcggcc 164 |||||||||||||||||||| Sbjct: 113883 ccgcgtcgacgacggcggcc 113902
>gb|AC129200.4| Mus musculus BAC clone RP24-221J22 from chromosome 2, complete sequence Length = 168365 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 16795 cctcctccctgtcctcctcc 16776
>gb|AC122502.5| Mus musculus BAC clone RP24-413E14 from chromosome 17, complete sequence Length = 187423 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 92418 cggaggcggaggcagaggaggcagaggc 92391
>gb|AC125115.3| Mus musculus BAC clone RP24-255F19 from chromosome 5, complete sequence Length = 170572 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctcaagctccctg 197 |||||||||||| ||||||| ||| ||||||| Sbjct: 3348 cctcctccctgttctcctccccaaactccctg 3317
>gb|AC090582.9| Homo sapiens chromosome 11, clone RP11-125F14, complete sequence Length = 96560 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 65042 cctcctccctgtcctcctcc 65061
>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence Length = 209066 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 23700 ggaggcggaggccgaggagg 23719
>ref|XM_547586.2| PREDICTED: Canis familiaris similar to Ladybird homeobox corepressor 1 (LOC490464), mRNA Length = 1302 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 675 cttcagctacaacgagatcc 694
>gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complete sequence Length = 131476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggagg 297 |||||||||||||||||||| Sbjct: 25316 ggaggcggaggtagaggagg 25335
>gb|BC021873.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:28064 IMAGE:3709271), complete cds Length = 1145 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 724 gaggaggaggaagaggaggcggtggccgaggtggtg 759
>gb|AC006003.4| Homo sapiens PAC clone RP4-782K24 from 7, complete sequence Length = 123255 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cacctcctccctgtcctcct 183 |||||||||||||||||||| Sbjct: 78746 cacctcctccctgtcctcct 78765 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cacctcctccctgtcctcct 183 |||||||||||||||||||| Sbjct: 78626 cacctcctccctgtcctcct 78645 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cacctcctccctgtcctcctcctc 187 |||||||||||| ||||||||||| Sbjct: 78512 cacctcctccctctcctcctcctc 78535
>gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, complete sequence Length = 136914 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 29777 cctcctccctgtcctcctcc 29796
>emb|Z82186.1|HS49D8 Human DNA sequence from clone CITF22-49D8 on chromosome 22, complete sequence Length = 35860 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 ||||||||||| |||||||||||||| |||| Sbjct: 23403 ggaggcggaggcggaggaggcggaggcggagg 23434 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggccgaggagg 312 |||||| ||||| |||||||||||||| ||||||| Sbjct: 23387 cggaggaggaggcggaggaggcggaggcggaggagg 23422
>gb|BC007048.1| Homo sapiens zinc finger, MYM-type 5, transcript variant 2, mRNA (cDNA clone MGC:12459 IMAGE:3681047), complete cds Length = 1121 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 42 gaggaggcggaggccgagga 61
>ref|XM_501884.1| Yarrowia lipolytica CLIB122, YALI0C15873g predicted mRNA Length = 966 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 gaggtagaggaggcggaggccgaggagg 312 ||||| || ||||||||||||||||||| Sbjct: 17 gaggtggacgaggcggaggccgaggagg 44
>ref|XM_502725.1| Yarrowia lipolytica CLIB122, YALI0D12012g predicted mRNA Length = 2061 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cacctcctccctgtcctcctcctc 187 |||||||||| ||||||||||||| Sbjct: 450 cacctcctccttgtcctcctcctc 427
>ref|NM_001037802.1| Homo sapiens functional smad suppressing element 18 (FUSSEL18), mRNA Length = 891 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 222 cttcagctacaacgagatcc 241
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ggcgcgccaggagcctgacg 449 |||||||||||||||||||| Sbjct: 1483024 ggcgcgccaggagcctgacg 1483005
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gtggtgcggcgcgcagtggg 333 |||||||||||||||||||| Sbjct: 1803429 gtggtgcggcgcgcagtggg 1803410
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gggcgcggccggtggtgctg 371 |||||||||||||||||||| Sbjct: 83526 gggcgcggccggtggtgctg 83507
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 cgcgtcgacgacggcggccacctcctcc 173 |||||||||||| |||||| |||||||| Sbjct: 59782 cgcgtcgacgaccgcggccgcctcctcc 59755
>emb|AL670472.7| Mouse DNA sequence from clone RP23-26M1 on chromosome 11 Contains a ribosomal protein S6 (Rps6) pseudogene, the gene for ileal fatty acid binding protein 6 (gastrotropin) (Fabp6), two novel genes, the gene for a novel protein (1810033K05Rik), a mitochondrial ribosomal protein 63 (Mrp63) pseudogene, the gene for step II splicing factor SLU7 (Slu7-pending), the Pttg1 gene for pituitary tumor-transforming 1 and a CpG island, complete sequence Length = 232609 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcctcaa 189 |||||||||| ||||||||||||| Sbjct: 150355 cctcctccctctcctcctcctcaa 150332
>gb|BC067044.1| Mus musculus gene model 1568, (NCBI), mRNA (cDNA clone MGC:91363 IMAGE:30531780), complete cds Length = 4032 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 454 ggaggcggaggccgaggagg 435
>gb|AC051635.7| Homo sapiens chromosome 18, clone RP11-540A4, complete sequence Length = 158608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 31757 cttcagctacaacgagatcc 31776
>emb|CR857620.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1826 (from clone DKFZp459N1826) Length = 3224 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 158 gaggaggcggaggccgagga 177
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcct 186 |||||||||||||||||||| Sbjct: 918071 ctcctccctgtcctcctcct 918052
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence Length = 202539 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 1135 cctcctccctgtcctcctcc 1154
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cgaccgccgccaccgccacg 113 |||||||||||||||||||| Sbjct: 2881073 cgaccgccgccaccgccacg 2881054
>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183291 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 71317 gaggaggcggaggccgagga 71336
>gb|AC015876.10| Homo sapiens chromosome 17, clone RP11-106H22, complete sequence Length = 121068 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tcctccctgtcctcctcctc 187 |||||||||||||||||||| Sbjct: 70088 tcctccctgtcctcctcctc 70069
>ref|NM_079412.2| Drosophila melanogaster Wrinkled CG5123-RA (W), mRNA Length = 4017 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 673 gaggaggcggaggccgagga 654
>gb|AY075188.1| Drosophila melanogaster AT13267 full length cDNA Length = 1893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 362 gaggaggcggaggccgagga 343
>dbj|AK141165.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230079P04 product:unclassifiable, full insert sequence Length = 2279 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 962 ggaggcggaggccgaggagg 981
>dbj|AK147473.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1049E04 product:hypothetical Glutamic acid-rich region profile/Arginine-rich region profile/Serine-rich region profile containing protein, full insert sequence Length = 5628 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ggaggcggaggccgaggagg 312 |||||||||||||||||||| Sbjct: 309 ggaggcggaggccgaggagg 290
>ref|NM_001039649.1| Homo sapiens zinc finger, MYM-type 5 (ZMYM5), transcript variant 2, mRNA Length = 1246 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 167 gaggaggcggaggccgagga 186
>ref|NM_001039650.1| Homo sapiens zinc finger, MYM-type 5 (ZMYM5), transcript variant 1, mRNA Length = 1532 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 167 gaggaggcggaggccgagga 186
>ref|NM_198773.1| Rattus norvegicus protein phosphatase 1E (PP2C domain containing) (Ppm1e), mRNA Length = 2743 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||| || ||||||||||| |||||||| Sbjct: 369 ggaggcggtggaagaggaggcggcggccgagg 400
>ref|NM_001024306.1| Rattus norvegicus similar to nucleolar protein family A, member 1 (LOC499709), mRNA Length = 1386 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 820 gaggaggaggaagaggaggcggtggccgaggtggtg 855
>dbj|AK167001.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027D03 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1005 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 600 gaggaggaggaagaggaggcggtggccgaggtggtg 635
>ref|NM_001029067.1| Caenorhabditis elegans Glycine Rich Secreted Protein family member (grsp-1) (grsp-1) mRNA, complete cds Length = 617 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||| || ||||||||||||||||||| Sbjct: 274 ggaggcggtggccgaggaggcggaggccgagg 305
>gb|BC079131.1| Rattus norvegicus similar to nucleolar protein family A, member 1, mRNA (cDNA clone MGC:94141 IMAGE:7127379), complete cds Length = 1386 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 820 gaggaggaggaagaggaggcggtggccgaggtggtg 855
>dbj|AK075923.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400008K01 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1000 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 595 gaggaggaggaagaggaggcggtggccgaggtggtg 630
>dbj|AK021256.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430047J18 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1024 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 621 gaggaggaggaagaggaggcggtggccgaggtggtg 656
>dbj|AK047996.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130028H23 product:unclassifiable, full insert sequence Length = 2090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggagg 297 |||||||||||||||||||| Sbjct: 1412 ggaggcggaggtagaggagg 1393
>dbj|AK037445.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130019J18 product:unclassifiable, full insert sequence Length = 3776 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tcctccctgtcctcctcctc 187 |||||||||||||||||||| Sbjct: 679 tcctccctgtcctcctcctc 660
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 acgacggcggccacctcctc 172 |||||||||||||||||||| Sbjct: 19208964 acgacggcggccacctcctc 19208945
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgaggaggt 313 ||||| |||||||||||||| ||||| |||||||| Sbjct: 24027 ggaggaggaggtagaggaggaggaggaggaggaggt 24062
>gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, complete sequence Length = 157779 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 13900 cctcctccctgtcctcctcc 13881
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 156942 cggaggtggaggtggaggaggcggaggc 156915
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence Length = 163597 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agaggaggcggaggccgagg 309 |||||||||||||||||||| Sbjct: 123311 agaggaggcggaggccgagg 123292
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 84542 cggaggtggaggtggaggaggcggaggc 84515
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 21834 cggaggtggaggtggaggaggcggaggc 21807
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 aacgaccgccgccaccgcca 111 |||||||||||||||||||| Sbjct: 2460149 aacgaccgccgccaccgcca 2460168
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgaccgccgccaccgccacgatgtggag 121 ||||| |||| ||||||||||||||||| Sbjct: 4157281 cgaccaccgcgaccgccacgatgtggag 4157254
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ctggccggggaggacggccc 388 |||||||||||||||||||| Sbjct: 867312 ctggccggggaggacggccc 867293
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 ggccgcggagggcgcggccggtggtgctggcc 374 |||||| | |||||||| |||||||||||||| Sbjct: 3046490 ggccgctgcgggcgcgggcggtggtgctggcc 3046459 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 gcgtggccgcggagggcgcggccggtgg 366 |||||||||||| || |||||||||||| Sbjct: 1629701 gcgtggccgcggtggtcgcggccggtgg 1629674
>dbj|AP005971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079K11 Length = 130082 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gcgtcgacgacggcggccac 166 |||||||||||||||||||| Sbjct: 104588 gcgtcgacgacggcggccac 104569
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 cccgcgctcgagctctgctgctccatga 564 |||| |||||||||||||| |||||||| Sbjct: 51 cccgtgctcgagctctgctactccatga 78
>gb|AF210726.1|AF210726 Macaca mulatta rhadinovirus 26-95 long unique region L-DNA, complete sequence Length = 130733 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgccggaccgggcgcggggg 417 |||||||||||||||||||| Sbjct: 115668 cgccggaccgggcgcggggg 115649
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1734_E04 Length = 101439 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 52197 cggaggcggaggaagaggaggccgaggc 52170
>dbj|AK120546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M01, full insert sequence Length = 1819 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 190 cggaggcggaggaagaggaggccgaggc 163
>dbj|AB081729.1| Rattus norvegicus mRNA for calmodulin-dependent protein kinase phosphatase N, complete cds Length = 2743 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||| || ||||||||||| |||||||| Sbjct: 369 ggaggcggtggaagaggaggcggcggccgagg 400
>ref|XM_310951.2| Anopheles gambiae str. PEST ENSANGP00000019421 (ENSANGG00000016932), partial mRNA Length = 1536 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tgacggacgacgacctggag 464 |||||||||||||||||||| Sbjct: 1394 tgacggacgacgacctggag 1413
>dbj|AK108310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F10, full insert sequence Length = 858 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 212 cggaggcggaggaagaggaggccgaggc 185
>gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq23, complete sequence Length = 185893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tcctccctgtcctcctcctc 187 |||||||||||||||||||| Sbjct: 95033 tcctccctgtcctcctcctc 95014
>dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G08, full insert sequence Length = 984 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 249 ggaggcggaggtggtggaggcggaggcggagg 280
>dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C08, full insert sequence Length = 1022 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 249 ggaggcggaggtggtggaggcggaggcggagg 280
>emb|AJ335351.1|HSA335351 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZH5R Length = 819 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 566 cttcagctacaacgagatcc 547
>emb|AJ334599.1|HSA334599 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DK12R Length = 988 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 566 cttcagctacaacgagatcc 547
>dbj|AK073315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026B10, full insert sequence Length = 1819 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||||||||| ||||||||| ||||| Sbjct: 190 cggaggcggaggaagaggaggccgaggc 163
>emb|AJ133355.1|HSA133355 Homo sapiens mRNA for ZNF237 protein, minor splice variant (a) Length = 1622 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 58 gaggaggcggaggccgagga 77
>emb|AJ133354.1|HSA133354 Homo sapiens mRNA for ZNF237 protein, minor splice variant (c) Length = 1337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 58 gaggaggcggaggccgagga 77
>emb|AJ133353.1|HSA133353 Homo sapiens mRNA for ZNF237 protein, minor splice variant (b) Length = 1096 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 58 gaggaggcggaggccgagga 77
>emb|AJ133352.1|HSA133352 Homo sapiens mRNA for ZNF237 protein, major splice variant Length = 1382 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 58 gaggaggcggaggccgagga 77
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full insert sequence Length = 1296 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 260 cggaggtggaggtggaggaggcggaggc 287
>dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F19, full insert sequence Length = 1083 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 250 ggaggcggaggtggtggaggcggaggcggagg 281
>dbj|AK067298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K06, full insert sequence Length = 2452 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acgacggcggccacctcctc 172 |||||||||||||||||||| Sbjct: 178 acgacggcggccacctcctc 197
>gb|BC048685.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:59268 IMAGE:6510731), complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 779 gaggaggaggaagaggaggcggtggccgaggtggtg 814
>gb|AY109698.1| Zea mays CL4149_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgacggcggccacctcctcc 173 |||||||||||||||||||| Sbjct: 1015 cgacggcggccacctcctcc 996
>gb|AY107570.1| Zea mays PCO128969 mRNA sequence Length = 2022 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ccaggagcctgacggacgac 455 |||||||||||||||||||| Sbjct: 1186 ccaggagcctgacggacgac 1205
>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||| || ||||||||||||||||||| Sbjct: 13700 ggaggcggtggccgaggaggcggaggccgagg 13731
>gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64 of 83 of the complete sequence Length = 271237 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gaggaggcggaggccgagga 310 |||||||||||||||||||| Sbjct: 105347 gaggaggcggaggccgagga 105366
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1156 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 148 cggaggtggaggtggaggaggcggaggc 175
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 277 cggaggcggaggtagaggaggcggaggc 304 |||||| |||||| |||||||||||||| Sbjct: 150 cggaggtggaggtggaggaggcggaggc 177
>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence Length = 157691 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ctcctccctgtcctcctcct 186 |||||||||||||||||||| Sbjct: 138396 ctcctccctgtcctcctcct 138377
>dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mRNA for chitinase, complete cds Length = 1067 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 234 ggaggcggaggtggtggaggcggaggcggagg 265
>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete sequence Length = 230886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 26810 cctcctccctgtcctcctcc 26829
>gb|AC174719.1| Gasterosteus aculeatus clone VMRC26-161K03, complete sequence Length = 73396 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ccacctcctccctgtcctcctcct 186 |||||||||||| ||||||||||| Sbjct: 6601 ccacctcctccccgtcctcctcct 6578
>gb|AC133180.3| Mus musculus BAC clone RP24-137D2 from chromosome 12, complete sequence Length = 123991 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ccacctcctccctgtcctcctcct 186 ||||||||||||| |||||||||| Sbjct: 13400 ccacctcctccctctcctcctcct 13377
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 ggaggcggaggtagaggaggcggaggccgagg 309 |||||||||||| | |||||||||||| |||| Sbjct: 74423 ggaggcggaggtggtggaggcggaggcggagg 74392
>emb|AL929196.5| Mouse DNA sequence from clone RP23-7D13 on chromosome 2, complete sequence Length = 51115 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcctccctgtcctcctcc 185 |||||||||||||||||||| Sbjct: 40770 cctcctccctgtcctcctcc 40789
>ref|NM_026578.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (Nola1), mRNA Length = 1024 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gaggcggaggtagaggaggcggaggccgaggaggtg 314 |||| ||||| ||||||||||| |||||||| |||| Sbjct: 621 gaggaggaggaagaggaggcggtggccgaggtggtg 656
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cacctcctccctgtcctcctcctc 187 |||||||||| ||||||||||||| Sbjct: 1488542 cacctcctccttgtcctcctcctc 1488565
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 gaggtagaggaggcggaggccgaggagg 312 ||||| || ||||||||||||||||||| Sbjct: 2256373 gaggtggacgaggcggaggccgaggagg 2256346
>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete sequence Length = 202336 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 284 ggaggtagaggaggcggaggccgaggaggtgt 315 ||||| |||||||||||||| |||||||||| Sbjct: 8147 ggaggaagaggaggcggaggaagaggaggtgt 8178
>gb|AY669508.1| Homo sapiens functional smad suppressing element 18 (FUSSEL18) mRNA, complete cds Length = 891 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttcagctacaacgagatcc 516 |||||||||||||||||||| Sbjct: 222 cttcagctacaacgagatcc 241
>gb|AC168210.13| Mus musculus chromosome 5, clone RP24-72J20, complete sequence Length = 193750 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aaagcaacagagagagacag 33 |||||||||||||||||||| Sbjct: 176806 aaagcaacagagagagacag 176787
>gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome 12, complete sequence Length = 235086 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 ccacctcctccctgtcctcctcct 186 ||||||||||||| |||||||||| Sbjct: 119000 ccacctcctccctctcctcctcct 119023 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,346,155 Number of Sequences: 3902068 Number of extensions: 5346155 Number of successful extensions: 165818 Number of sequences better than 10.0: 255 Number of HSP's better than 10.0 without gapping: 263 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159801 Number of HSP's gapped (non-prelim): 6004 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
