ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predic... 182 9e-43
2gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 182 9e-43
3gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 182 9e-43
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
5gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
6gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
7gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
10ref|NM_193792.1| Oryza sativa (japonica cultivar-group), predic... 44 0.52
11gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cance... 44 0.52
12gb|AC124360.5| Mus musculus BAC clone RP24-502M22 from chromosom... 44 0.52
13emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chr... 44 0.52
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
15dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
16emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2... 44 0.52
17emb|AL133153.3|CNS01DU3 Human chromosome 14 DNA sequence BAC R-8... 44 0.52
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
19dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21dbj|AK101725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
22dbj|AK069218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
23dbj|AB034197.1| Carassius auratus mRNA for lamin B3, complete cds 42 2.0
24gb|AC124597.5| Mus musculus BAC clone RP23-21K1 from chromosome ... 40 8.1
25gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosom... 40 8.1
26gb|AC128673.4| Homo sapiens BAC clone RP11-1195P3 from UL, compl... 40 8.1
27gb|AC164882.2| Mus musculus BAC clone RP23-88F16 from chromosome... 40 8.1
28gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 8.1
29emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on ch... 40 8.1
30emb|AL360270.18| Human DNA sequence from clone RP11-96K19 on chr... 40 8.1
31emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chro... 40 8.1
32emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chr... 40 8.1
33gb|BC039099.1| Homo sapiens cDNA clone IMAGE:4824737 40 8.1
34gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chrom... 40 8.1
35dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 8.1
36dbj|AK092143.1| Homo sapiens cDNA FLJ34824 fis, clone NT2NE2008783 40 8.1
37gb|AC109584.2| Homo sapiens chromosome 3 clone RP11-674P14, comp... 40 8.1
38gb|AC011773.9| Homo sapiens chromosome 8, clone RP11-219B4, comp... 40 8.1
39gb|AC074135.3| Homo sapiens chromosome 19 clone CTD-2291D10, com... 40 8.1
40dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 8.1
41gb|AC092797.2| Homo sapiens chromosome 3 clone RP11-452E8, compl... 40 8.1
42gb|AC092290.3| Homo sapiens chromosome 5 clone CTD-2376K3, compl... 40 8.1
43gb|AC161621.5| Pan troglodytes BAC clone CH251-164P18 from chrom... 40 8.1
44emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in ... 40 8.1
45gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 8.1
46gb|AC018682.4| Homo sapiens BAC clone RP11-417F21 from 2, comple... 40 8.1
47dbj|AP006564.1| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.1
48emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on ch... 40 8.1 
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score =  182 bits (92), Expect = 9e-43
 Identities = 320/396 (80%)
 Strand = Plus / Plus

                                                                       
Query: 192 tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 251
           ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 539 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 598

                                                                       
Query: 252 caggagagggcattgtgacaggcctcaacttgtcgggatacggcctatcgggcaccttat 311
           |||| ||||||||||| || ||||||||| ||||||| |||||||| || |||||  |||
Sbjct: 599 caggggagggcattgtcaccggcctcaacctgtcggggtacggcctgtccggcacgatat 658

                                                                       
Query: 312 cgccggcgatagctggcctgatatccgtggagatcattgacctctcctccaactccctca 371
           ||||||||||||| |||||  ||||||| |||  |||||| || || || || |||||||
Sbjct: 659 cgccggcgatagccggccttgtatccgtcgagtccattgatctgtcgtcaaattccctca 718

                                                                       
Query: 372 ccgggccgatcccgccagagctcggcaggctgcagaacctgaagacgctgctcctctact 431
           ||||  | |||||||| |||||||| | | || ||| ||||||||||||||| ||  |||
Sbjct: 719 ccggcgcaatcccgccggagctcgggacgatgaagagcctgaagacgctgctgcttcact 778

                                                                       
Query: 432 ccaactccctcgtcggcaccatcccttccgagctgggcctccttgtgaacctgaaagttc 491
           |||||  ||||  |||| |||||||  | ||||| |||  |||   |||||||||  | |
Sbjct: 779 ccaacctcctcaccggcgccatcccaccggagctcggcggcctcaagaacctgaagttac 838

                                                                       
Query: 492 tcaggattggtgacaacaggctgcacggtgagataccaccacagctcggcaactgcacgg 551
           | ||||| ||  |||||  ||||| ||| |||||||||||  |||||||| ||||| |||
Sbjct: 839 tgaggatcggcaacaacccgctgcgcggcgagataccaccggagctcggcgactgctcgg 898

                                               
Query: 552 agctcgagaacatggcgctggcctactgccagctga 587
           |||| ||||  || |   ||||||||||||||||||
Sbjct: 899 agctggagacgatcggcatggcctactgccagctga 934
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score =  182 bits (92), Expect = 9e-43
 Identities = 320/396 (80%)
 Strand = Plus / Plus

                                                                         
Query: 192   tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 251
             ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 41139 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 41198

                                                                         
Query: 252   caggagagggcattgtgacaggcctcaacttgtcgggatacggcctatcgggcaccttat 311
             |||| ||||||||||| || ||||||||| ||||||| |||||||| || |||||  |||
Sbjct: 41199 caggggagggcattgtcaccggcctcaacctgtcggggtacggcctgtccggcacgatat 41258

                                                                         
Query: 312   cgccggcgatagctggcctgatatccgtggagatcattgacctctcctccaactccctca 371
             ||||||||||||| |||||  ||||||| |||  |||||| || || || || |||||||
Sbjct: 41259 cgccggcgatagccggccttgtatccgtcgagtccattgatctgtcgtcaaattccctca 41318

                                                                         
Query: 372   ccgggccgatcccgccagagctcggcaggctgcagaacctgaagacgctgctcctctact 431
             ||||  | |||||||| |||||||| | | || ||| ||||||||||||||| ||  |||
Sbjct: 41319 ccggcgcaatcccgccggagctcgggacgatgaagagcctgaagacgctgctgcttcact 41378

                                                                         
Query: 432   ccaactccctcgtcggcaccatcccttccgagctgggcctccttgtgaacctgaaagttc 491
             |||||  ||||  |||| |||||||  | ||||| |||  |||   |||||||||  | |
Sbjct: 41379 ccaacctcctcaccggcgccatcccaccggagctcggcggcctcaagaacctgaagttac 41438

                                                                         
Query: 492   tcaggattggtgacaacaggctgcacggtgagataccaccacagctcggcaactgcacgg 551
             | ||||| ||  |||||  ||||| ||| |||||||||||  |||||||| ||||| |||
Sbjct: 41439 tgaggatcggcaacaacccgctgcgcggcgagataccaccggagctcggcgactgctcgg 41498

                                                 
Query: 552   agctcgagaacatggcgctggcctactgccagctga 587
             |||| ||||  || |   ||||||||||||||||||
Sbjct: 41499 agctggagacgatcggcatggcctactgccagctga 41534
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>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
              complete sequence
          Length = 136713

 Score =  182 bits (92), Expect = 9e-43
 Identities = 320/396 (80%)
 Strand = Plus / Plus

                                                                          
Query: 192    tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 251
              ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 129354 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 129413

                                                                          
Query: 252    caggagagggcattgtgacaggcctcaacttgtcgggatacggcctatcgggcaccttat 311
              |||| ||||||||||| || ||||||||| ||||||| |||||||| || |||||  |||
Sbjct: 129414 caggggagggcattgtcaccggcctcaacctgtcggggtacggcctgtccggcacgatat 129473

                                                                          
Query: 312    cgccggcgatagctggcctgatatccgtggagatcattgacctctcctccaactccctca 371
              ||||||||||||| |||||  ||||||| |||  |||||| || || || || |||||||
Sbjct: 129474 cgccggcgatagccggccttgtatccgtcgagtccattgatctgtcgtcaaattccctca 129533

                                                                          
Query: 372    ccgggccgatcccgccagagctcggcaggctgcagaacctgaagacgctgctcctctact 431
              ||||  | |||||||| |||||||| | | || ||| ||||||||||||||| ||  |||
Sbjct: 129534 ccggcgcaatcccgccggagctcgggacgatgaagagcctgaagacgctgctgcttcact 129593

                                                                          
Query: 432    ccaactccctcgtcggcaccatcccttccgagctgggcctccttgtgaacctgaaagttc 491
              |||||  ||||  |||| |||||||  | ||||| |||  |||   |||||||||  | |
Sbjct: 129594 ccaacctcctcaccggcgccatcccaccggagctcggcggcctcaagaacctgaagttac 129653

                                                                          
Query: 492    tcaggattggtgacaacaggctgcacggtgagataccaccacagctcggcaactgcacgg 551
              | ||||| ||  |||||  ||||| ||| |||||||||||  |||||||| ||||| |||
Sbjct: 129654 tgaggatcggcaacaacccgctgcgcggcgagataccaccggagctcggcgactgctcgg 129713

                                                  
Query: 552    agctcgagaacatggcgctggcctactgccagctga 587
              |||| ||||  || |   ||||||||||||||||||
Sbjct: 129714 agctggagacgatcggcatggcctactgccagctga 129749
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  182 bits (92), Expect = 9e-43
 Identities = 320/396 (80%)
 Strand = Plus / Plus

                                                                           
Query: 192     tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 251
               ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 4154660 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 4154719

                                                                           
Query: 252     caggagagggcattgtgacaggcctcaacttgtcgggatacggcctatcgggcaccttat 311
               |||| ||||||||||| || ||||||||| ||||||| |||||||| || |||||  |||
Sbjct: 4154720 caggggagggcattgtcaccggcctcaacctgtcggggtacggcctgtccggcacgatat 4154779

                                                                           
Query: 312     cgccggcgatagctggcctgatatccgtggagatcattgacctctcctccaactccctca 371
               ||||||||||||| |||||  ||||||| |||  |||||| || || || || |||||||
Sbjct: 4154780 cgccggcgatagccggccttgtatccgtcgagtccattgatctgtcgtcaaattccctca 4154839

                                                                           
Query: 372     ccgggccgatcccgccagagctcggcaggctgcagaacctgaagacgctgctcctctact 431
               ||||  | |||||||| |||||||| | | || ||| ||||||||||||||| ||  |||
Sbjct: 4154840 ccggcgcaatcccgccggagctcgggacgatgaagagcctgaagacgctgctgcttcact 4154899

                                                                           
Query: 432     ccaactccctcgtcggcaccatcccttccgagctgggcctccttgtgaacctgaaagttc 491
               |||||  ||||  |||| |||||||  | ||||| |||  |||   |||||||||  | |
Sbjct: 4154900 ccaacctcctcaccggcgccatcccaccggagctcggcggcctcaagaacctgaagttac 4154959

                                                                           
Query: 492     tcaggattggtgacaacaggctgcacggtgagataccaccacagctcggcaactgcacgg 551
               | ||||| ||  |||||  ||||| ||| |||||||||||  |||||||| ||||| |||
Sbjct: 4154960 tgaggatcggcaacaacccgctgcgcggcgagataccaccggagctcggcgactgctcgg 4155019

                                                   
Query: 552     agctcgagaacatggcgctggcctactgccagctga 587
               |||| ||||  || |   ||||||||||||||||||
Sbjct: 4155020 agctggagacgatcggcatggcctactgccagctga 4155055
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>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01,
              complete sequence
          Length = 136068

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 506    aacaggctgcacggtgagatacc 528
              |||||||||||||||||||||||
Sbjct: 129572 aacaggctgcacggtgagatacc 129594
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>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0459F09, complete sequence
          Length = 143533

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 506   aacaggctgcacggtgagatacc 528
             |||||||||||||||||||||||
Sbjct: 74540 aacaggctgcacggtgagatacc 74562
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>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0459F09, complete sequence
          Length = 143533

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 506   aacaggctgcacggtgagatacc 528
             |||||||||||||||||||||||
Sbjct: 74540 aacaggctgcacggtgagatacc 74562
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 506      aacaggctgcacggtgagatacc 528
                |||||||||||||||||||||||
Sbjct: 20361667 aacaggctgcacggtgagatacc 20361645
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 506      aacaggctgcacggtgagatacc 528
                |||||||||||||||||||||||
Sbjct: 20671901 aacaggctgcacggtgagatacc 20671879
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>ref|NM_193792.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2118

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 350 gacctctcctccaactccctca 371
           ||||||||||||||||||||||
Sbjct: 442 gacctctcctccaactccctca 463



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 373 cgggccgatcccgccagagctcggc 397
           ||||||||||||||| |||||||||
Sbjct: 393 cgggccgatcccgccggagctcggc 417
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>gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209653

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 238   tgtttcatgcctgacaggagag 259
             ||||||||||||||||||||||
Sbjct: 32512 tgtttcatgcctgacaggagag 32491
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>gb|AC124360.5| Mus musculus BAC clone RP24-502M22 from chromosome 10, complete sequence
          Length = 184346

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 238    tgtttcatgcctgacaggagag 259
              ||||||||||||||||||||||
Sbjct: 170584 tgtttcatgcctgacaggagag 170563
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>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a
             novel gene and a novel pseudogene, complete sequence
          Length = 119343

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    tctgctatctttgctctttggc 100
             ||||||||||||||||||||||
Sbjct: 38954 tctgctatctttgctctttggc 38975
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 350      gacctctcctccaactccctca 371
                ||||||||||||||||||||||
Sbjct: 18201785 gacctctcctccaactccctca 18201806



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 373      cgggccgatcccgccagagctcggc 397
                ||||||||||||||| |||||||||
Sbjct: 18201736 cgggccgatcccgccggagctcggc 18201760
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>dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1075D06
          Length = 130528

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 350   gacctctcctccaactccctca 371
             ||||||||||||||||||||||
Sbjct: 53230 gacctctcctccaactccctca 53251



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 373   cgggccgatcccgccagagctcggc 397
             ||||||||||||||| |||||||||
Sbjct: 53181 cgggccgatcccgccggagctcggc 53205
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>emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2547L24 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203777

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 352    cctctcctccaactccctcacc 373
              ||||||||||||||||||||||
Sbjct: 149233 cctctcctccaactccctcacc 149254
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>emb|AL133153.3|CNS01DU3 Human chromosome 14 DNA sequence BAC R-895M11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 231490

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 352   cctctcctccaactccctcacc 373
             ||||||||||||||||||||||
Sbjct: 60781 cctctcctccaactccctcacc 60802
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 350      gacctctcctccaactccctcaccgggccgatcccgccagagctcggcaggct 402
                ||||||||||||||| | ||  |||| |||||||||  |||||||||| ||||
Sbjct: 24964254 gacctctcctccaacacgctggccggcccgatcccgggagagctcggcgggct 24964202
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>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0023I22
          Length = 170029

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 350   gacctctcctccaactccctcaccgggccgatcccgccagagctcggcaggct 402
             ||||||||||||||| | ||  |||| |||||||||  |||||||||| ||||
Sbjct: 16587 gacctctcctccaacacgctggccggcccgatcccgggagagctcggcgggct 16535
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>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0530H05
          Length = 145952

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 350   gacctctcctccaactccctcaccgggccgatcccgccagagctcggcaggct 402
             ||||||||||||||| | ||  |||| |||||||||  |||||||||| ||||
Sbjct: 58809 gacctctcctccaacacgctggccggcccgatcccgggagagctcggcgggct 58757
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>dbj|AK101725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061C03, full
           insert sequence
          Length = 1463

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 350 gacctctcctccaactccctcaccgggccgatcccgccagagctcggcaggct 402
           ||||||||||||||| | ||  |||| |||||||||  |||||||||| ||||
Sbjct: 743 gacctctcctccaacacgctggccggcccgatcccgggagagctcggcgggct 795
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>dbj|AK069218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O06, full
           insert sequence
          Length = 2625

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 373 cgggccgatcccgccagagctcggc 397
           ||||||||||||||| |||||||||
Sbjct: 452 cgggccgatcccgccggagctcggc 476
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>dbj|AB034197.1| Carassius auratus mRNA for lamin B3, complete cds
          Length = 2062

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 399 ggctgcagaacctgaagacgc 419
           |||||||||||||||||||||
Sbjct: 682 ggctgcagaacctgaagacgc 702
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>gb|AC124597.5| Mus musculus BAC clone RP23-21K1 from chromosome 6, complete sequence
          Length = 185242

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aggctgatgtctgctcctgg 232
              ||||||||||||||||||||
Sbjct: 180113 aggctgatgtctgctcctgg 180132
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>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   aggctgatgtctgctcctgg 232
             ||||||||||||||||||||
Sbjct: 42699 aggctgatgtctgctcctgg 42718
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>gb|AC128673.4| Homo sapiens BAC clone RP11-1195P3 from UL, complete sequence
          Length = 209514

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    ggcacggtgtttcatgcctg 250
              ||||||||||||||||||||
Sbjct: 101763 ggcacggtgtttcatgcctg 101782
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>gb|AC164882.2| Mus musculus BAC clone RP23-88F16 from chromosome 9, complete sequence
          Length = 203020

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   tctcctccaactccctcacc 373
             ||||||||||||||||||||
Sbjct: 45486 tctcctccaactccctcacc 45505
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 555     tcgagaacatggcgctggcctact 578
               ||||||| ||||||||||||||||
Sbjct: 3001400 tcgagaatatggcgctggcctact 3001423
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>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5'
              end of the gene for protein phosphatase 2A 48 kDa
              regulatory subunit (PR48), a fatty acid binding protein 5
              (psoriasis-associated) (FABP5) pseudogene, a pseudogene
              similar to part of keratin 18 (KRT18) and nine CpG islands,
              complete sequence
          Length = 218723

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    ggcacggtgtttcatgcctg 250
              ||||||||||||||||||||
Sbjct: 121347 ggcacggtgtttcatgcctg 121328
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>emb|AL360270.18| Human DNA sequence from clone RP11-96K19 on chromosome 1 Contains a
             putative novel transcript, a gene for a novel protein
             (FLJ11269), a processed pseudogene for cyclin T2 (CCNT2)
             and a CpG island, complete sequence
          Length = 172805

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 68034 ggcacggtgtttcatgcctg 68015
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>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3
             Contains part of the gene for InaD-like protein (INADL),
             complete sequence
          Length = 143226

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 93268 ggcacggtgtttcatgcctg 93249
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>emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chromosome 6, complete
             sequence
          Length = 67372

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 65144 ggcacggtgtttcatgcctg 65125
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>gb|BC039099.1| Homo sapiens cDNA clone IMAGE:4824737
          Length = 1264

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  ttctgctatctttgctcttt 97
           ||||||||||||||||||||
Sbjct: 257 ttctgctatctttgctcttt 276
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>gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chromosome unknown,
            complete sequence
          Length = 146069

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  ggcacggtgtttcatgcctg 250
            ||||||||||||||||||||
Sbjct: 7985 ggcacggtgtttcatgcctg 7966
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     cgccagagctcggcaggctg 403
               ||||||||||||||||||||
Sbjct: 2903219 cgccagagctcggcaggctg 2903238
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>dbj|AK092143.1| Homo sapiens cDNA FLJ34824 fis, clone NT2NE2008783
          Length = 2078

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tgacctctcctccaactccc 368
           ||||||||||||||||||||
Sbjct: 836 tgacctctcctccaactccc 855
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>gb|AC109584.2| Homo sapiens chromosome 3 clone RP11-674P14, complete sequence
          Length = 179199

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    tgacctctcctccaactccc 368
              ||||||||||||||||||||
Sbjct: 131406 tgacctctcctccaactccc 131387
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>gb|AC011773.9| Homo sapiens chromosome 8, clone RP11-219B4, complete sequence
          Length = 160283

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    ttctgctatctttgctcttt 97
             ||||||||||||||||||||
Sbjct: 79245 ttctgctatctttgctcttt 79226
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>gb|AC074135.3| Homo sapiens chromosome 19 clone CTD-2291D10, complete sequence
          Length = 121050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 74307 ggcacggtgtttcatgcctg 74326
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    cctctcctccaactccctca 371
              ||||||||||||||||||||
Sbjct: 479862 cctctcctccaactccctca 479881
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>gb|AC092797.2| Homo sapiens chromosome 3 clone RP11-452E8, complete sequence
          Length = 200278

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   tgacctctcctccaactccc 368
             ||||||||||||||||||||
Sbjct: 83286 tgacctctcctccaactccc 83267
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>gb|AC092290.3| Homo sapiens chromosome 5 clone CTD-2376K3, complete sequence
          Length = 80527

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 62879 ggcacggtgtttcatgcctg 62898
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>gb|AC161621.5| Pan troglodytes BAC clone CH251-164P18 from chromosome unknown,
             complete sequence
          Length = 172032

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ggcacggtgtttcatgcctg 250
             ||||||||||||||||||||
Sbjct: 56970 ggcacggtgtttcatgcctg 56989
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>emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in linkage group 9,
             complete sequence
          Length = 94606

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   acctgaagacgctgctcctc 427
             ||||||||||||||||||||
Sbjct: 48254 acctgaagacgctgctcctc 48235
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 562     catggcgctggcctactgcc 581
               ||||||||||||||||||||
Sbjct: 1016356 catggcgctggcctactgcc 1016375
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>gb|AC018682.4| Homo sapiens BAC clone RP11-417F21 from 2, complete sequence
          Length = 181405

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    aacctgaaagttctcaggat 498
              ||||||||||||||||||||
Sbjct: 100515 aacctgaaagttctcaggat 100496
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>dbj|AP006564.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-1157N02_A, complete
             sequence
          Length = 127500

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   tcctggcacggtgtttcatgcctg 250
             ||||||||||||| ||||||||||
Sbjct: 74219 tcctggcacggtggttcatgcctg 74242
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>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete
             sequence
          Length = 230151

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   attggtgacaacaggctgca 516
             ||||||||||||||||||||
Sbjct: 82838 attggtgacaacaggctgca 82857


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,929,151
Number of Sequences: 3902068
Number of extensions: 3929151
Number of successful extensions: 71937
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71653
Number of HSP's gapped (non-prelim): 281
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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