ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY968588.1| Triticum aestivum ice recrystallization inhibitio... 674 0.0
2gb|AY968589.1| Triticum aestivum ice recrystallization inhibitio... 165 2e-37
3ref|NM_186147.1| Oryza sativa (japonica cultivar-group), mRNA 60 9e-06
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
5dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
6dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
7dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
8dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
9gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence 54 5e-04
10emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone... 50 0.008
11ref|NM_101585.2| Arabidopsis thaliana protein binding / protein ... 48 0.033
12gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 geno... 48 0.033
13gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete... 44 0.51
14gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 44 0.51
15ref|XM_426012.1| PREDICTED: Gallus gallus similar to CCXC chemok... 42 2.0
16emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor clu... 42 2.0
17emb|AL772328.13| Mouse DNA sequence from clone RP23-270A19 on ch... 42 2.0
18dbj|AP002948.1| Helicolenus hilgendorfi mitochondrial DNA, compl... 42 2.0
19ref|NM_105889.4| Arabidopsis thaliana ATP binding / protein kina... 40 8.0
20ref|XM_508592.1| PREDICTED: Pan troglodytes similar to DNA polym... 40 8.0
21gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome... 40 8.0
22ref|XM_518049.1| PREDICTED: Pan troglodytes similar to Sin3A ass... 40 8.0
23ref|XM_592432.2| PREDICTED: Bos taurus similar to retinoblastoma... 40 8.0
24gb|AY341060.1| Homo sapiens Sin3A associated protein p30-like mR... 40 8.0
25ref|XM_849837.1| PREDICTED: Canis familiaris similar to Sin3A as... 40 8.0
26ref|XM_848002.1| PREDICTED: Canis familiaris similar to retinobl... 40 8.0
27gb|BC056705.1| Danio rerio cDNA clone IMAGE:6801601, partial cds 40 8.0
28gb|BC066447.1| Danio rerio sap30-like, mRNA (cDNA clone MGC:7736... 40 8.0
29gb|BC009829.2| Homo sapiens SAP30-like, mRNA (cDNA clone MGC:150... 40 8.0
30ref|NM_214703.1| Danio rerio sap30-like (sap30l), mRNA 40 8.0
31gb|AY133783.1| Arabidopsis thaliana clone U10901 putative leucin... 40 8.0
32gb|AY080797.1| Arabidopsis thaliana putative leucine-rich recept... 40 8.0
33gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, com... 40 8.0
34ref|NM_024632.3| Homo sapiens SAP30-like (SAP30L), mRNA 40 8.0
35dbj|AK021588.1| Homo sapiens cDNA FLJ11526 fis, clone HEMBA10025... 40 8.0
36gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D1... 40 8.0
37emb|BX815929.1|CNS0AAS2 Arabidopsis thaliana Full-length cDNA Co... 40 8.0
38gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N... 40 8.0
39ref|XM_340803.2| PREDICTED: Rattus norvegicus similar to hypothe... 40 8.0
40gb|AY846876.1| Homo sapiens NS4ATP2 (NS4ATP2) mRNA, complete cds 40 8.0
41gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.0
42gb|AC140266.3| Mus musculus BAC clone RP24-300H3 from 7, complet... 40 8.0 
>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
           precursor, mRNA, complete cds
          Length = 1079

 Score =  674 bits (340), Expect = 0.0
 Identities = 521/582 (89%), Gaps = 7/582 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  acttgccaatcacttgcaccccaaaaggctttcttgctgcca-------atccatggcaa 62
           |||||||||||||||||||| |||||||||||||||||||||       ||||||||| |
Sbjct: 36  acttgccaatcacttgcacctcaaaaggctttcttgctgccacagctgaatccatggcga 95

                                                                       
Query: 63  aatgcgggctgcttctcctgttcttggcgttcctcttgccggtggcacgtgcaacgtcgt 122
           ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 96  aatgcgggctgctgctcctgttcttggcgttcctcttgccggcggcacgtgcaacgtcgt 155

                                                                       
Query: 123 gccaccccgacgatctccgtgctctacggggcttcgccgggaatctcagcggcggggctg 182
           |||||||||| || |||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 156 gccaccccgatgacctccgtgcgctacggggcttcgccggaaacctcagcggtggggctg 215

                                                                       
Query: 183 tcctcctccgtgctgcgtggtccggtgcctcgtgctgcggctgggaaggtgtgggctgtg 242
            ||||||||||||||| |||||||||||||| ||||||| ||||||||| |||  ||| |
Sbjct: 216 ccctcctccgtgctgcctggtccggtgcctcctgctgcgtctgggaaggcgtgaactgcg 275

                                                                       
Query: 243 acggtcctagcggccgtgtcacgtccctgcggctccctgggcacgaccttgggggagcca 302
           | ||  ||||||||||||||||| | ||||||||||||||||||| ||| | |||   ||
Sbjct: 276 atggcactagcggccgtgtcacggcgctgcggctccctgggcacggcctcgtggggctca 335

                                                                       
Query: 303 tcccaggagcatctttggcaggcctcgcatggttggaggagctcaaccttgccaacaaca 362
           ||||||||||||| ||||||||||| ||| || | |||||||||||||||||||||||||
Sbjct: 336 tcccaggagcatccttggcaggccttgcacggctagaggagctcaaccttgccaacaaca 395

                                                                       
Query: 363 gactggttggcaccatcccgtcatggattggcgagcttgaccacctttactacttggatc 422
            |||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 396 aactggtcggcaccatcccatcatggattggcgagcttgatcacctttgctacttggatc 455

                                                                       
Query: 423 tttcagataattcattggttggcgaggtacccaagagtttgatacggctcaagggcctcg 482
           | || |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 456 tgtcggataattcattggttggcgaggtacccaagagtttgatacggctcaagggtcttg 515

                                                                       
Query: 483 ccatcgctggtcgttcatcaggtatgatttttactaacatgccattgtatgtgaagccta 542
            ||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 516 tcatcgctggtcattcactaggtatggtttttactaacatgccattgtatgtgaagcgta 575

                                                     
Query: 543 acagaagaatgctcgacgaaacaccaaatacaatatctggga 584
           | |||||||  |||||||||  ||||||||||||||||||||
Sbjct: 576 atagaagaacactcgacgaacaaccaaatacaatatctggga 617
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>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2
           precursor, mRNA, complete cds
          Length = 1596

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                       
Query: 343 gctcaaccttgccaacaacagactggttggcaccatcccgtcatggattggcgagcttga 402
           ||||| |||||||||||||||| |||| |||||||||||||| |||||||| ||||||||
Sbjct: 744 gctcagccttgccaacaacagattggtcggcaccatcccgtcgtggattggtgagcttga 803

                                                                       
Query: 403 ccacctttactacttggatctttcagataattcattggttggcgaggtacccaagagttt 462
           ||||||| ||||||||||||| ||| |||||||| || ||||| ||||||| ||||||| 
Sbjct: 804 ccaccttcactacttggatctctcaaataattcaatgattggcaaggtaccgaagagttc 863

                                  
Query: 463 gatacggctcaagggcctcgcca 485
           || ||| ||||||||||||||||
Sbjct: 864 gacacgactcaagggcctcgcca 886



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtggtccggtgcctcgtgctgcggctgggaaggtgtgggctgtgacggtcctagcggccg 258
           |||||| || |||||||||||||  |||||||||||||||||  | ||| | ||||||||
Sbjct: 162 gtggtctggcgcctcgtgctgcgattgggaaggtgtgggctgccatggtgccagcggccg 221

                                                                       
Query: 259 tgtcacgtccctgcggctccctgggcacgaccttgggggagccatcccaggagcatcttt 318
            |||||| | |||||||||| ||| |||| ||| | |||  ||||||||||||| ||  |
Sbjct: 222 cgtcacggctctgcggctccatggtcacggcctcgcggggcccatcccaggagcctccct 281

                                       
Query: 319 ggcaggcctcgcatggttggaggagctc 346
            || ||||||  | ||||||||||||||
Sbjct: 282 tgcgggcctcataaggttggaggagctc 309



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 65/78 (83%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                       
Query: 85  cttggcgttcctcttgccggtggcacgtgcaacgtcgtgccaccccgacgatctccgtgc 144
           ||||||||| |||||||||| |||| | || ||||   ||||||||||||| || |||||
Sbjct: 51  cttggcgtttctcttgccggcggcaagcgcgacgt---gccaccccgacgacctacgtgc 107

                             
Query: 145 tctacggggcttcgccgg 162
            || |||||||| |||||
Sbjct: 108 gctgcggggcttggccgg 125
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>ref|NM_186147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3033

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                        
Query: 412  ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
            |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 1407 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 1466

                                                                        
Query: 472  caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
            |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 1467 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 1526

                          
Query: 532  tgtgaagcctaaca 545
            |||||||| |||||
Sbjct: 1527 tgtgaagcataaca 1540
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                          
Query: 412    ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
              |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 425503 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 425562

                                                                          
Query: 472    caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
              |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 425563 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 425622

                            
Query: 532    tgtgaagcctaaca 545
              |||||||| |||||
Sbjct: 425623 tgtgaagcataaca 425636
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                         
Query: 412   ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
             |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 27667 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 27726

                                                                         
Query: 472   caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
             |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 27727 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 27786

                           
Query: 532   tgtgaagcctaaca 545
             |||||||| |||||
Sbjct: 27787 tgtgaagcataaca 27800
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>dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O10, full
            insert sequence
          Length = 3392

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                        
Query: 412  ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
            |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 1533 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 1592

                                                                        
Query: 472  caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
            |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 1593 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 1652

                          
Query: 532  tgtgaagcctaaca 545
            |||||||| |||||
Sbjct: 1653 tgtgaagcataaca 1666
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>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full
            insert sequence
          Length = 2958

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                        
Query: 412  ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
            |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 1071 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 1130

                                                                        
Query: 472  caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
            |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 1131 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 1190

                          
Query: 532  tgtgaagcctaaca 545
            |||||||| |||||
Sbjct: 1191 tgtgaagcataaca 1204
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>dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B08, full
           insert sequence
          Length = 2238

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 412 ctacttggatctttcagataattcattggttggcgaggtacccaagagtttgatacggct 471
           |||||||||||||||| | ||||| || || |||||| |||| ||||||||||  | |||
Sbjct: 218 ctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagct 277

                                                                       
Query: 472 caagggcctcgccatcgctggtcgttcatcaggtatgatttttactaacatgccattgta 531
           |||| |||| | || |||  | |||||  | ||||||   || ||||||||||| |||||
Sbjct: 278 caagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgta 337

                         
Query: 532 tgtgaagcctaaca 545
           |||||||| |||||
Sbjct: 338 tgtgaagcataaca 351
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>gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence
          Length = 2283

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 515 actaacatgccattgtatgtgaagcctaacagaag 549
           |||| |||||||||||||||||||| |||||||||
Sbjct: 456 actagcatgccattgtatgtgaagcataacagaag 490
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>emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone B10K17
          Length = 77292

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 205   cggtgcctcgtgctgcggctgggaaggtg 233
             |||||||| ||||||||||||||||||||
Sbjct: 12213 cggtgcctagtgctgcggctgggaaggtg 12241
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>ref|NM_101585.2| Arabidopsis thaliana protein binding / protein kinase AT1G17240 mRNA,
            complete cds
          Length = 2302

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 405  acctttactacttggatctttcagataa 432
            |||||| |||||||||||||||||||||
Sbjct: 1553 accttttctacttggatctttcagataa 1580
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>gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 genomic sequence, complete
             sequence
          Length = 114935

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 405   acctttactacttggatctttcagataa 432
             |||||| |||||||||||||||||||||
Sbjct: 26272 accttttctacttggatctttcagataa 26299
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>gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete sequence
          Length = 158302

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 216   gctgcggctgggaaggtgtggg 237
             ||||||||||||||||||||||
Sbjct: 40503 gctgcggctgggaaggtgtggg 40482
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 216   gctgcggctgggaaggtgtggg 237
             ||||||||||||||||||||||
Sbjct: 40503 gctgcggctgggaaggtgtggg 40482
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>ref|XM_426012.1| PREDICTED: Gallus gallus similar to CCXC chemokine receptor 1 like
           (LOC428452), mRNA
          Length = 1590

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 169 cagcggcggggctgtcctcct 189
           |||||||||||||||||||||
Sbjct: 388 cagcggcggggctgtcctcct 368
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>emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor cluster
          Length = 210954

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   cagcggcggggctgtcctcct 189
             |||||||||||||||||||||
Sbjct: 85836 cagcggcggggctgtcctcct 85816
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>emb|AL772328.13| Mouse DNA sequence from clone RP23-270A19 on chromosome 4, complete
             sequence
          Length = 219095

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   gtgcctcgtgctgcggctggg 227
             |||||||||||||||||||||
Sbjct: 68206 gtgcctcgtgctgcggctggg 68186
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>dbj|AP002948.1| Helicolenus hilgendorfi mitochondrial DNA, complete genome
          Length = 16728

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  tgggaaggtgtgggctgtgac 244
            |||||||||||||||||||||
Sbjct: 8051 tgggaaggtgtgggctgtgac 8031
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>ref|NM_105889.4| Arabidopsis thaliana ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT1G72300 mRNA, complete cds
          Length = 3577

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 405  acctttactacttggatctttcagataa 432
            |||||| ||||||||||||||| |||||
Sbjct: 1669 accttttctacttggatctttccgataa 1696
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>ref|XM_508592.1| PREDICTED: Pan troglodytes similar to DNA polymerase delta subunit
           4 (DNA polymerase delta subunit p12) (LOC451366), mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tggtccggtgcctcgtgctg 219
           ||||||||||||||||||||
Sbjct: 80  tggtccggtgcctcgtgctg 99
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>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence
          Length = 227709

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 291    ttgggggagccatcccagga 310
              ||||||||||||||||||||
Sbjct: 223836 ttgggggagccatcccagga 223817
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>ref|XM_518049.1| PREDICTED: Pan troglodytes similar to Sin3A associated protein
            p30-like (LOC462208), mRNA
          Length = 1643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ggctgtcctcctccgtgctg 197
            ||||||||||||||||||||
Sbjct: 1003 ggctgtcctcctccgtgctg 984
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>ref|XM_592432.2| PREDICTED: Bos taurus similar to retinoblastoma-associated factor
            600, transcript variant 1 (LOC514561), mRNA
          Length = 16266

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  gctgtcctcctccgtgctgc 198
            ||||||||||||||||||||
Sbjct: 1813 gctgtcctcctccgtgctgc 1794
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>gb|AY341060.1| Homo sapiens Sin3A associated protein p30-like mRNA, complete cds
          Length = 1434

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 622 ggctgtcctcctccgtgctg 603
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>ref|XM_849837.1| PREDICTED: Canis familiaris similar to Sin3A associated protein
           p30-like (LOC612111), mRNA
          Length = 1282

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 614 ggctgtcctcctccgtgctg 595
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>ref|XM_848002.1| PREDICTED: Canis familiaris similar to retinoblastoma-associated
            factor 600, transcript variant 2 (LOC478211), mRNA
          Length = 15938

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  gctgtcctcctccgtgctgc 198
            ||||||||||||||||||||
Sbjct: 1813 gctgtcctcctccgtgctgc 1794
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>gb|BC056705.1| Danio rerio cDNA clone IMAGE:6801601, partial cds
          Length = 1452

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 420 ggctgtcctcctccgtgctg 439
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>gb|BC066447.1| Danio rerio sap30-like, mRNA (cDNA clone MGC:77367 IMAGE:6968836),
           complete cds
          Length = 1549

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 100 ggctgtcctcctccgtgctg 81
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>gb|BC009829.2| Homo sapiens SAP30-like, mRNA (cDNA clone MGC:15059 IMAGE:3937610),
           complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 613 ggctgtcctcctccgtgctg 594
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>ref|NM_214703.1| Danio rerio sap30-like (sap30l), mRNA
          Length = 1549

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 100 ggctgtcctcctccgtgctg 81
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>gb|AY133783.1| Arabidopsis thaliana clone U10901 putative leucine-rich receptor
            protein kinase (At1g72300) mRNA, complete cds
          Length = 3319

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 405  acctttactacttggatctttcagataa 432
            |||||| ||||||||||||||| |||||
Sbjct: 1559 accttttctacttggatctttccgataa 1586
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>gb|AY080797.1| Arabidopsis thaliana putative leucine-rich receptor protein kinase
            (At1g72300) mRNA, complete cds
          Length = 3569

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 405  acctttactacttggatctttcagataa 432
            |||||| ||||||||||||||| |||||
Sbjct: 1668 accttttctacttggatctttccgataa 1695
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>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence
          Length = 205604

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ggagccatcccaggagcatc 315
              ||||||||||||||||||||
Sbjct: 134589 ggagccatcccaggagcatc 134608
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>ref|NM_024632.3| Homo sapiens SAP30-like (SAP30L), mRNA
          Length = 1426

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 614 ggctgtcctcctccgtgctg 595
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>dbj|AK021588.1| Homo sapiens cDNA FLJ11526 fis, clone HEMBA1002555, weakly similar
           to Homo sapiens mSin3A associated polypeptide p30 mRNA
          Length = 1283

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 679 ggctgtcctcctccgtgctg 660
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>gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D17, complete sequence
          Length = 137592

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ggctgtcctcctccgtgctg 197
             ||||||||||||||||||||
Sbjct: 13003 ggctgtcctcctccgtgctg 13022
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>emb|BX815929.1|CNS0AAS2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH17ZG09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 3552

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 405  acctttactacttggatctttcagataa 432
            |||||| ||||||||||||||| |||||
Sbjct: 1645 accttttctacttggatctttccgataa 1672
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>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete
             sequence
          Length = 98874

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 405   acctttactacttggatctttcagataa 432
             |||||| ||||||||||||||| |||||
Sbjct: 83353 accttttctacttggatctttccgataa 83326
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>ref|XM_340803.2| PREDICTED: Rattus norvegicus similar to hypothetical protein
           FLJ11526 (predicted) (LOC360531), mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 486 ggctgtcctcctccgtgctg 467
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>gb|AY846876.1| Homo sapiens NS4ATP2 (NS4ATP2) mRNA, complete cds
          Length = 552

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggctgtcctcctccgtgctg 197
           ||||||||||||||||||||
Sbjct: 31  ggctgtcctcctccgtgctg 12
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tgtcctcctccgtgctgcgt 200
              ||||||||||||||||||||
Sbjct: 479537 tgtcctcctccgtgctgcgt 479518
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>gb|AC140266.3| Mus musculus BAC clone RP24-300H3 from 7, complete sequence
          Length = 168787

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   ttgggggagccatcccagga 310
             ||||||||||||||||||||
Sbjct: 35319 ttgggggagccatcccagga 35300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,059,686
Number of Sequences: 3902068
Number of extensions: 4059686
Number of successful extensions: 71667
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71538
Number of HSP's gapped (non-prelim): 128
length of query: 585
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 562
effective length of database: 17,143,297,704
effective search space: 9634533309648
effective search space used: 9634533309648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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