ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473353.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 234 bits (118), Expect = 3e-58 Identities = 163/178 (91%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 187 tgcgacatctgtcaggagaagagggggttcttgttctgcaaggaggacagggcgatcctg 246 Query: 370 tgccgggagtgcgacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccgg 429 ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 247 tgccgggagtgcgacgtcacggtgcacaccacgagcgagctgacgaggcggcacggccgg 306 Query: 430 ttcctgctcaccggcgtgcgggtctcgtcggcgccggcggaaacccccgcgccgtcgg 487 ||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 307 ttcctcctcaccggcgtgcgcctctcgtcggcgccgatggactcccccgcgccgtcgg 364 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||| Sbjct: 1 atgaaggtgcagtgcgacgtgtgcgcggccgaggccgcctcggtcttctgctgcgccgac 60 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 gaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcgaacaagctcgccggg 120 Query: 238 aagcaccgccgcctgtccctcctc 261 ||||||||||| | ||||||||| Sbjct: 121 aagcaccgccgattctccctcctc 144 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 559 agcgcgagcgacggcagcagcatctccga 587 |||||||||||||| |||||||||||||| Sbjct: 436 agcgcgagcgacgggagcagcatctccga 464
>dbj|AK061333.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A11, full insert sequence Length = 1220 Score = 234 bits (118), Expect = 3e-58 Identities = 163/178 (91%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 384 tgcgacatctgtcaggagaagagggggttcttgttctgcaaggaggacagggcgatcctg 443 Query: 370 tgccgggagtgcgacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccgg 429 ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 444 tgccgggagtgcgacgtcacggtgcacaccacgagcgagctgacgaggcggcacggccgg 503 Query: 430 ttcctgctcaccggcgtgcgggtctcgtcggcgccggcggaaacccccgcgccgtcgg 487 ||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 504 ttcctcctcaccggcgtgcgcctctcgtcggcgccgatggactcccccgcgccgtcgg 561 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Plus Query: 117 catgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccga 176 |||||||||||||||||||||||||| ||| ||||| ||| | ||||||||||||||||| Sbjct: 197 catgaaggtgcagtgcgacgtgtgcgcggccgaggccgcctcggtcttctgctgcgccga 256 Query: 177 cgaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccgg 236 ||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 257 cgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcgaacaagctcgccgg 316 Query: 237 caagcaccgccgcctgtccctcctc 261 ||||||||||| | ||||||||| Sbjct: 317 gaagcaccgccgattctccctcctc 341 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 559 agcgcgagcgacggcagcagcatctccga 587 |||||||||||||| |||||||||||||| Sbjct: 633 agcgcgagcgacgggagcagcatctccga 661
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 68886 caggagaagagggggttcttgttctgcaaggaggacagggcgatcctgtgccgggagtgc 68945 Query: 382 gacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccggttcctgctcacc 441 ||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 68946 gacgtcacggtgcacaccacgagcgagctgacgaggcggcacggccggttcctcctcacc 69005 Query: 442 ggcgtgcgggtctcgtcggcgccggcggaaacccccgcgccgtcgg 487 |||||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 69006 ggcgtgcgcctctcgtcggcgccgatggactcccccgcgccgtcgg 69051 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Plus Query: 117 catgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccga 176 |||||||||||||||||||||||||| ||| ||||| ||| | ||||||||||||||||| Sbjct: 68594 catgaaggtgcagtgcgacgtgtgcgcggccgaggccgcctcggtcttctgctgcgccga 68653 Query: 177 cgaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccgg 236 ||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 68654 cgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcgaacaagctcgccgg 68713 Query: 237 caagcaccgccgcctgtccctcctc 261 ||||||||||| | ||||||||| Sbjct: 68714 gaagcaccgccgattctccctcctc 68738 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 559 agcgcgagcgacggcagcagcatctccga 587 |||||||||||||| |||||||||||||| Sbjct: 69123 agcgcgagcgacgggagcagcatctccga 69151
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27001185 caggagaagagggggttcttgttctgcaaggaggacagggcgatcctgtgccgggagtgc 27001244 Query: 382 gacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccggttcctgctcacc 441 ||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 27001245 gacgtcacggtgcacaccacgagcgagctgacgaggcggcacggccggttcctcctcacc 27001304 Query: 442 ggcgtgcgggtctcgtcggcgccggcggaaacccccgcgccgtcgg 487 |||||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 27001305 ggcgtgcgcctctcgtcggcgccgatggactcccccgcgccgtcgg 27001350 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Plus Query: 117 catgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccga 176 |||||||||||||||||||||||||| ||| ||||| ||| | ||||||||||||||||| Sbjct: 27000893 catgaaggtgcagtgcgacgtgtgcgcggccgaggccgcctcggtcttctgctgcgccga 27000952 Query: 177 cgaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccgg 236 ||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| Sbjct: 27000953 cgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcgaacaagctcgccgg 27001012 Query: 237 caagcaccgccgcctgtccctcctc 261 ||||||||||| | ||||||||| Sbjct: 27001013 gaagcaccgccgattctccctcctc 27001037 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 24624440 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 24624381 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 24624380 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 24624323 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 559 agcgcgagcgacggcagcagcatctccga 587 |||||||||||||| |||||||||||||| Sbjct: 27001422 agcgcgagcgacgggagcagcatctccga 27001450 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Minus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 ||||||||| || |||| | |||||| ||||||||||||| || | |||||||| ||| Sbjct: 24624137 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 24624078 Query: 382 gacg 385 |||| Sbjct: 24624077 gacg 24624074 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgccggcaagcaccgccgcc 250 |||||||||||||||||||| Sbjct: 22119798 cgccggcaagcaccgccgcc 22119779 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tctccatcctcctcatcatc 287 |||||||||||||||||||| Sbjct: 19923264 tctccatcctcctcatcatc 19923283 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 accgccgcctgtccctcctc 261 |||||||||||||||||||| Sbjct: 16740486 accgccgcctgtccctcctc 16740467
>ref|XM_467034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 364 tgcgacatctgccaggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctg 423 Query: 370 tgccgggagtgcgacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccgg 429 ||||| |||||||||||| ||||||||||| |||||||| || | ||| ||| ||||| Sbjct: 424 tgccgcgagtgcgacgtgccggtgcacacggcgagcgagctcaccatgcgccacagccgg 483 Query: 430 ttcctgctcaccggcgtgcgggtctcgtcgg 460 | ||| ||||||||||||||| |||| |||| Sbjct: 484 tacctcctcaccggcgtgcggctctcctcgg 514 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| |||||||| | || ||||||||||||||| Sbjct: 172 atgaaggtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgac 231 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| Sbjct: 232 gaggccgcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccggg 291 Query: 238 aagcaccgccg 248 ||||||||||| Sbjct: 292 aagcaccgccg 302
>dbj|AK071507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D24, full insert sequence Length = 1200 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 364 tgcgacatctgccaggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctg 423 Query: 370 tgccgggagtgcgacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccgg 429 ||||| |||||||||||| ||||||||||| |||||||| || | ||| ||| ||||| Sbjct: 424 tgccgcgagtgcgacgtgccggtgcacacggcgagcgagctcaccatgcgccacagccgg 483 Query: 430 ttcctgctcaccggcgtgcgggtctcgtcgg 460 | ||| ||||||||||||||| |||| |||| Sbjct: 484 tacctcctcaccggcgtgcggctctcctcgg 514 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| |||||||| | || ||||||||||||||| Sbjct: 172 atgaaggtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgac 231 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| Sbjct: 232 gaggccgcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccggg 291 Query: 238 aagcaccgccg 248 ||||||||||| Sbjct: 292 aagcaccgccg 302
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| |||||||| | || ||||||||||||||| Sbjct: 26046448 atgaaggtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgac 26046507 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| Sbjct: 26046508 gaggccgcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccggg 26046567 Query: 238 aagcaccgccg 248 ||||||||||| Sbjct: 26046568 aagcaccgccg 26046578 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 26046751 caggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgc 26046810 Query: 382 gacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccggttcctgctcacc 441 |||||| ||||||||||| |||||||| || | ||| ||| |||||| ||| |||||| Sbjct: 26046811 gacgtgccggtgcacacggcgagcgagctcaccatgcgccacagccggtacctcctcacc 26046870 Query: 442 ggcgtgcgggtctcgtcgg 460 ||||||||| |||| |||| Sbjct: 26046871 ggcgtgcggctctcctcgg 26046889 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcgaggcggaggcggccacc 159 |||||||||||||||||||| Sbjct: 6275308 gcgaggcggaggcggccacc 6275327
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| |||||||| | || ||||||||||||||| Sbjct: 53894 atgaaggtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgac 53953 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| Sbjct: 53954 gaggccgcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccggg 54013 Query: 238 aagcaccgccg 248 ||||||||||| Sbjct: 54014 aagcaccgccg 54024 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 54197 caggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgc 54256 Query: 382 gacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccggttcctgctcacc 441 |||||| ||||||||||| |||||||| || | ||| ||| |||||| ||| |||||| Sbjct: 54257 gacgtgccggtgcacacggcgagcgagctcaccatgcgccacagccggtacctcctcacc 54316 Query: 442 ggcgtgcgggtctcgtcgg 460 ||||||||| |||| |||| Sbjct: 54317 ggcgtgcggctctcctcgg 54335
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Plus Query: 118 atgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgac 177 ||||||||||||||||||||||||| ||| |||||||| | || ||||||||||||||| Sbjct: 110321 atgaaggtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgac 110380 Query: 178 gaggccgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggc 237 |||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| Sbjct: 110381 gaggccgcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccggg 110440 Query: 238 aagcaccgccg 248 ||||||||||| Sbjct: 110441 aagcaccgccg 110451 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 110624 caggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgc 110683 Query: 382 gacgtgaaggtgcacacggtcagcgagctgacgaggcggcacggccggttcctgctcacc 441 |||||| ||||||||||| |||||||| || | ||| ||| |||||| ||| |||||| Sbjct: 110684 gacgtgccggtgcacacggcgagcgagctcaccatgcgccacagccggtacctcctcacc 110743 Query: 442 ggcgtgcgggtctcgtcgg 460 ||||||||| |||| |||| Sbjct: 110744 ggcgtgcggctctcctcgg 110762
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 123 ggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggc 182 ||||||||||||||| |||| || ||| ||||| | || ||||||||||||||||||| Sbjct: 29680387 ggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgccgacgaggc 29680446 Query: 183 cgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagca 242 |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 29680447 cgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgccagcaagca 29680506 Query: 243 ccgccgcct 251 ||||||||| Sbjct: 29680507 ccgccgcct 29680515 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 2694647 cgccaacaagctcgccgggaagcacc 2694672
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 123 ggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggc 182 ||||||||||||||| |||| || ||| ||||| | || ||||||||||||||||||| Sbjct: 53501 ggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgccgacgaggc 53560 Query: 183 cgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagca 242 |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 53561 cgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgccagcaagca 53620 Query: 243 ccgccgcct 251 ||||||||| Sbjct: 53621 ccgccgcct 53629
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 123 ggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggc 182 ||||||||||||||| |||| || ||| ||||| | || ||||||||||||||||||| Sbjct: 123972 ggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgccgacgaggc 124031 Query: 183 cgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagca 242 |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 124032 cgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgccagcaagca 124091 Query: 243 ccgccgcct 251 ||||||||| Sbjct: 124092 ccgccgcct 124100
>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full insert sequence Length = 1380 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 123 ggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggc 182 ||||||||||||||| |||| || ||| ||||| | || ||||||||||||||||||| Sbjct: 186 ggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgccgacgaggc 245 Query: 183 cgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagca 242 |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 246 cgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgccagcaagca 305 Query: 243 ccgccgcct 251 ||||||||| Sbjct: 306 ccgccgcct 314
>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1479 Length = 1223 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 123 ggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggc 182 ||||||||||||||| |||| || ||| ||||| | || ||||||||||||||||||| Sbjct: 29 ggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgccgacgaggc 88 Query: 183 cgcgctgtgcggcgcgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagca 242 |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 89 cgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgccagcaagca 148 Query: 243 ccgccgcct 251 ||||||||| Sbjct: 149 ccgccgcct 157
>gb|AY109441.1| Zea mays CL359_1 mRNA sequence Length = 1551 Score = 79.8 bits (40), Expect = 9e-12 Identities = 113/132 (85%), Gaps = 4/132 (3%) Strand = Plus / Plus Query: 115 gccatgaaggtgcagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgcc 174 ||||||||| | |||||||||| |||||||| | ||| |||||||| | ||||||||| Sbjct: 91 gccatgaagatccagtgcgacgcgtgcgagggcgcggctgccaccgtggtgtgctgcgcc 150 Query: 175 gacgaggccgcgctgtgcg-gcgcgtgcgaccgccgcg-tccaccgcgccaacaagctcg 232 ||||||||||||||||||| |||| ||||| || || | ||||| |||||||||||||| Sbjct: 151 gacgaggccgcgctgtgcgcgcgc-tgcga-cgtcgagatccacgccgccaacaagctcg 208 Query: 233 ccggcaagcacc 244 || ||||||||| Sbjct: 209 ccagcaagcacc 220 Score = 40.1 bits (20), Expect = 8.0 Identities = 62/76 (81%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 |||||| ||||||||||||| || |||| | |||||| ||||||| ||||| || | Sbjct: 262 tgcgacgtctgccaggagaaagcggcgttcatcttctgcgtggaggaccgggcgctcttc 321 Query: 370 tgccgggagtgcgacg 385 |||||||| ||||||| Sbjct: 322 tgccgggactgcgacg 337
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 77.8 bits (39), Expect = 4e-11 Identities = 98/115 (85%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 138 gtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcgctgtgcg-gcg 196 ||||||||||| || ||||| |||| |||||||||||||||||||||| ||||||| ||| Sbjct: 134824 gtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcg 134883 Query: 197 cgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagcaccgccgcct 251 | ||||||||| | ||||| ||||||| |||||||| ||||||| |||||| Sbjct: 134884 c-tgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcct 134937
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 4e-11 Identities = 98/115 (85%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 138 gtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcgctgtgcg-gcg 196 ||||||||||| || ||||| |||| |||||||||||||||||||||| ||||||| ||| Sbjct: 6433085 gtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcg 6433144 Query: 197 cgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagcaccgccgcct 251 | ||||||||| | ||||| ||||||| |||||||| ||||||| |||||| Sbjct: 6433145 c-tgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcct 6433198
>dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C11, full insert sequence Length = 2055 Score = 77.8 bits (39), Expect = 4e-11 Identities = 98/115 (85%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 138 gtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcgctgtgcg-gcg 196 ||||||||||| || ||||| |||| |||||||||||||||||||||| ||||||| ||| Sbjct: 253 gtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcg 312 Query: 197 cgtgcgaccgccgcgtccaccgcgccaacaagctcgccggcaagcaccgccgcct 251 | ||||||||| | ||||| ||||||| |||||||| ||||||| |||||| Sbjct: 313 c-tgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcct 366
>ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 10 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 69 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 70 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 |||||| |||||||||||||| || |||| | |||||| ||||||||||||| || | Sbjct: 172 tgcgacgtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttc 231 Query: 370 tgccgggagtgcgacg 385 |||||||| ||||||| Sbjct: 232 tgccgggactgcgacg 247
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 79585 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 79526 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 79525 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 79468 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Minus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 ||||||||| || |||| | |||||| ||||||||||||| || | |||||||| ||| Sbjct: 79282 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 79223 Query: 382 gacg 385 |||| Sbjct: 79222 gacg 79219
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 63234 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 63175 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 63174 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 63117 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Minus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 ||||||||| || |||| | |||||| ||||||||||||| || | |||||||| ||| Sbjct: 62928 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 62869 Query: 382 gacg 385 |||| Sbjct: 62868 gacg 62865
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 13963 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 13904 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 13903 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 13846 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Minus Query: 322 caggagaagagggggttcctgttctgcaaggaggacagggcgatcctgtgccgggagtgc 381 ||||||||| || |||| | |||||| ||||||||||||| || | |||||||| ||| Sbjct: 13660 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 13601 Query: 382 gacg 385 |||| Sbjct: 13600 gacg 13597
>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:E10707 Length = 987 Score = 63.9 bits (32), Expect = 6e-07 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 127 cagtgcgacgtgtgcgaggcggaggcggccaccgtcttctgctgcgccgacgaggccgcg 186 |||||||||| ||||||||| | ||||||||| || | |||||||| |||||||| ||| Sbjct: 32 cagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggacgaggcggcg 91 Query: 187 ctgtgcggcgcg-tgcgaccgccgcg-tccaccgcgccaacaagctcgccggcaagcacc 244 ||||||| |||| |||||| | || | ||||| |||||||||||||||| ||||||||| Sbjct: 92 ctgtgcg-cgcgctgcgac-gtcgagatccacgccgccaacaagctcgccagcaagcacc 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaagagggggttcctgttctgcaaggaggacagggcgatcctg 369 |||||| |||||||||||||| || |||| | |||||| ||||||||||||| || | Sbjct: 194 tgcgacgtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttc 253 Query: 370 tgccgggagtgcgacg 385 |||||||| ||||||| Sbjct: 254 tgccgggactgcgacg 269
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 61.9 bits (31), Expect = 2e-06 Identities = 84/99 (84%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 164 tctgctgcgccgacgaggccgcgctgtgcggcgcg-tgcgaccgccgcgtccaccgcgcc 222 |||||||||||||||| ||||| || |||| |||| ||||||| || ||||||| |||| Sbjct: 47 tctgctgcgccgacgacgccgccctctgcg-cgcgctgcgacctccacgtccacgccgcc 105 Query: 223 aacaagctcgccggcaagcaccgccgcctgtccctcctc 261 ||| |||||||||||||||| |||||| |||||||| Sbjct: 106 aaccgcctcgccggcaagcaccaccgcctccccctcctc 144
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 166 tgctgcgccgacgaggccgcgctgtgcggcgcgtgcgaccgccg-cgtccaccgcgccaa 224 ||||||||||||||||||||||| ||| || ||||| ||||| ||||||| |||||| Sbjct: 5698900 tgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactccgccaa 5698958 Query: 225 caagctcgccggcaagcac 243 || |||||||||||||||| Sbjct: 5698959 caggctcgccggcaagcac 5698977
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 84/99 (84%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 164 tctgctgcgccgacgaggccgcgctgtgcggcgcg-tgcgaccgccgcgtccaccgcgcc 222 |||||||||||||||| ||||| || |||| |||| ||||||| || ||||||| |||| Sbjct: 5638873 tctgctgcgccgacgacgccgccctctgcg-cgcgctgcgacctccacgtccacgccgcc 5638931 Query: 223 aacaagctcgccggcaagcaccgccgcctgtccctcctc 261 ||| |||||||||||||||| |||||| |||||||| Sbjct: 5638932 aaccgcctcgccggcaagcaccaccgcctccccctcctc 5638970 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 accgccgcctgtccctcctc 261 |||||||||||||||||||| Sbjct: 27099833 accgccgcctgtccctcctc 27099814
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 61.9 bits (31), Expect = 2e-06 Identities = 84/99 (84%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 164 tctgctgcgccgacgaggccgcgctgtgcggcgcg-tgcgaccgccgcgtccaccgcgcc 222 |||||||||||||||| ||||| || |||| |||| ||||||| || ||||||| |||| Sbjct: 104346 tctgctgcgccgacgacgccgccctctgcg-cgcgctgcgacctccacgtccacgccgcc 104404 Query: 223 aacaagctcgccggcaagcaccgccgcctgtccctcctc 261 ||| |||||||||||||||| |||||| |||||||| Sbjct: 104405 aaccgcctcgccggcaagcaccaccgcctccccctcctc 104443
>dbj|AK067820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117D12, full insert sequence Length = 793 Score = 61.9 bits (31), Expect = 2e-06 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 166 tgctgcgccgacgaggccgcgctgtgcggcgcgtgcgaccgccg-cgtccaccgcgccaa 224 ||||||||||||||||||||||| ||| || ||||| ||||| ||||||| |||||| Sbjct: 113 tgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactccgccaa 171 Query: 225 caagctcgccggcaagcac 243 || |||||||||||||||| Sbjct: 172 caggctcgccggcaagcac 190 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaaga 331 |||||||||||||||||||||| Sbjct: 260 tgcgacatctgccaggagaaga 281
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 166 tgctgcgccgacgaggccgcgctgtgcggcgcgtgcgaccgccg-cgtccaccgcgccaa 224 ||||||||||||||||||||||| ||| || ||||| ||||| ||||||| |||||| Sbjct: 5698893 tgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactccgccaa 5698951 Query: 225 caagctcgccggcaagcac 243 || |||||||||||||||| Sbjct: 5698952 caggctcgccggcaagcac 5698970
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 61.9 bits (31), Expect = 2e-06 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 166 tgctgcgccgacgaggccgcgctgtgcggcgcgtgcgaccgccg-cgtccaccgcgccaa 224 ||||||||||||||||||||||| ||| || ||||| ||||| ||||||| |||||| Sbjct: 53423 tgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactccgccaa 53481 Query: 225 caagctcgccggcaagcac 243 || |||||||||||||||| Sbjct: 53482 caggctcgccggcaagcac 53500
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 1207 tgcgccgacgaggccgcgctgtgcg 1231
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 35256087 tgcgccgacgaggccgcgctgtgcg 35256063
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 134848 tgcgccgacgaggccgcgctgtgcg 134824
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 35346159 tgcgccgacgaggccgcgctgtgcg 35346135
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 112367 tgcgccgacgaggccgcgctgtgcg 112391
>dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H05, full insert sequence Length = 1631 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 169 tgcgccgacgaggccgcgctgtgcg 193 ||||||||||||||||||||||||| Sbjct: 1207 tgcgccgacgaggccgcgctgtgcg 1231
>ref|XM_550653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1339 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 164 cgccaacaagctcgccgggaagcacc 189
>gb|AE009130.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 156 of 256 of the complete sequence Length = 10196 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ccatcctcctcatcatcgccttcctc 296 ||||| |||||||||||||||||||| Sbjct: 5028 ccatcatcctcatcatcgccttcctc 5053
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ccatcctcctcatcatcgccttcctc 296 ||||| |||||||||||||||||||| Sbjct: 1725999 ccatcatcctcatcatcgccttcctc 1726024
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 gcaccgccgcctgtccctcctcgacc 265 |||||||||||||||| ||||||||| Sbjct: 3128732 gcaccgccgcctgtccatcctcgacc 3128757
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 149988 cgccaacaagctcgccgggaagcacc 150013
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 106394 cgccaacaagctcgccgggaagcacc 106419
>dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D01, full insert sequence Length = 1339 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 164 cgccaacaagctcgccgggaagcacc 189
>dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E21, full insert sequence Length = 1450 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 197 cgccaacaagctcgccgggaagcacc 222
>dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R2931 Length = 1418 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 219 cgccaacaagctcgccggcaagcacc 244 |||||||||||||||||| ||||||| Sbjct: 172 cgccaacaagctcgccgggaagcacc 197
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 tgccagcgccagcgcgagcga 569 ||||||||||||||||||||| Sbjct: 966485 tgccagcgccagcgcgagcga 966505
>ref|XM_863904.1| PREDICTED: Bos taurus hypothetical protein LOC613297 (LOC613297), mRNA Length = 387 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 gaggcggccaccgtcttctgctgcg 172 ||||||||| ||||||||||||||| Sbjct: 280 gaggcggccgccgtcttctgctgcg 304
>ref|XM_823657.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.4600) partial mRNA Length = 1980 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 cgtctccatcctcctcatcatcgcc 290 |||||||||||||||| |||||||| Sbjct: 1969 cgtctccatcctcctcctcatcgcc 1945
>ref|XM_847063.1| PREDICTED: Canis familiaris hypothetical protein LOC609737 (LOC609737), mRNA Length = 597 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 gaggcggccaccgtcttctgctgcg 172 ||||||||| ||||||||||||||| Sbjct: 79 gaggcggccgccgtcttctgctgcg 103
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 555 cgccagcgcgagcgacggcagcagc 579 |||||||||||||| |||||||||| Sbjct: 3062417 cgccagcgcgagcgccggcagcagc 3062441
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA sequence Length = 1225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tgcgacatctgccaggagaag 330 ||||||||||||||||||||| Sbjct: 245 tgcgacatctgccaggagaag 265
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gcgatgccagcgccagcgcga 565 ||||||||||||||||||||| Sbjct: 1803460 gcgatgccagcgccagcgcga 1803480
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tcgccggcaagcaccgccgcc 250 ||||||||||||||||||||| Sbjct: 2874830 tcgccggcaagcaccgccgcc 2874810
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tcctcatcatcgccttcctca 297 ||||||||||||||||||||| Sbjct: 3935699 tcctcatcatcgccttcctca 3935719
>emb|AL116902.1|CNS01DJI Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gtctccatcctcctcatcatc 287 ||||||||||||||||||||| Sbjct: 102 gtctccatcctcctcatcatc 82
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence Length = 163597 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 tctgccaggagaagagggggt 337 ||||||||||||||||||||| Sbjct: 143695 tctgccaggagaagagggggt 143715
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence Length = 174914 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 tctgccaggagaagagggggt 337 ||||||||||||||||||||| Sbjct: 159982 tctgccaggagaagagggggt 159962
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 gcgcgtgcgaccgccgcgtccaccgcgc 221 |||||| ||||||||||||| ||||||| Sbjct: 106227 gcgcgttcgaccgccgcgtcgaccgcgc 106254
>ref|XM_523492.1| PREDICTED: Pan troglodytes similar to KIAA0339 protein (LOC468101), mRNA Length = 2589 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggaggaggaagagaacagca 511 |||||||||||||||||||| Sbjct: 1035 ggaggaggaagagaacagca 1054
>ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tctccatcctcctcatcatc 287 |||||||||||||||||||| Sbjct: 875 tctccatcctcctcatcatc 856
>ref|NM_192507.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 accgccgcctgtccctcctc 261 |||||||||||||||||||| Sbjct: 312 accgccgcctgtccctcctc 293
>ref|XM_472635.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgccggcaagcaccgccgcc 250 |||||||||||||||||||| Sbjct: 322 cgccggcaagcaccgccgcc 303
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgaccgccgcgtccaccgcg 220 |||||||||||||||||||| Sbjct: 707451 cgaccgccgcgtccaccgcg 707470
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgccgacgaggccgcgctg 189 |||||||||||||||||||| Sbjct: 1175711 gcgccgacgaggccgcgctg 1175730
>ref|XM_367497.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07408.4) partial mRNA Length = 6378 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 442 ggcgtgcgggtctcgtcggcgccggcgg 469 |||||| ||| ||||||||||||||||| Sbjct: 6142 ggcgtgggggactcgtcggcgccggcgg 6169
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgccgacgaggccgcgctg 189 |||||||||||||||||||| Sbjct: 2339670 gcgccgacgaggccgcgctg 2339651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgccgacgaggccgcgctgt 190 |||||||||||||||||||| Sbjct: 1240855 cgccgacgaggccgcgctgt 1240836
>ref|NM_014712.1| Homo sapiens SET domain containing 1A (SETD1A), mRNA Length = 6447 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggaggaggaagagaacagca 511 |||||||||||||||||||| Sbjct: 2219 ggaggaggaagagaacagca 2238
>ref|XM_653622.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1110.2), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 ggtctggaggaggaagagaa 506 |||||||||||||||||||| Sbjct: 1417 ggtctggaggaggaagagaa 1436
>ref|XM_572684.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02640) partial mRNA Length = 822 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgaccgccgcgtccaccgcg 220 |||||||||||||||||||| Sbjct: 364 cgaccgccgcgtccaccgcg 345
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ggaggaggaagagaacagca 511 |||||||||||||||||||| Sbjct: 41455 ggaggaggaagagaacagca 41436
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agaacagcaccagccgctgc 522 |||||||||||||||||||| Sbjct: 885807 agaacagcaccagccgctgc 885788
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 caccgtcttctgctgcgccg 175 |||||||||||||||||||| Sbjct: 38800 caccgtcttctgctgcgccg 38781
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 ccgacgaggccgcgctgtgcggcgcgtgcgac 204 |||||| |||||||||| ||||||||||||| Sbjct: 106667 ccgacgcggccgcgctggccggcgcgtgcgac 106636
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 ccgacgaggccgcgctgtgcggcgcgtgcgac 204 |||||| |||||||||| ||||||||||||| Sbjct: 219645 ccgacgcggccgcgctggccggcgcgtgcgac 219614
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 ccgacgaggccgcgctgtgcggcgcgtgcgac 204 |||||| |||||||||| ||||||||||||| Sbjct: 202921 ccgacgcggccgcgctggccggcgcgtgcgac 202890
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgccgacgaggccgcgctg 189 |||||||||||||||||||| Sbjct: 2044893 gcgccgacgaggccgcgctg 2044912 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgccgacgaggccgcgctgt 190 |||||||||||||||||||| Sbjct: 1143767 cgccgacgaggccgcgctgt 1143748
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgccggcaagcaccgccgcc 250 |||||||||||||||||||| Sbjct: 18279 cgccggcaagcaccgccgcc 18260
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tctccatcctcctcatcatc 287 |||||||||||||||||||| Sbjct: 78072 tctccatcctcctcatcatc 78091
>gb|BC105232.1| Bos taurus extracellular matrix protein 2, female organ and adipocyte specific, mRNA (cDNA clone MGC:128563 IMAGE:7985345), complete cds Length = 2204 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tcctcctcatcatcgccttcctca 297 ||||||||||||||| |||||||| Sbjct: 895 tcctcctcatcatcgtcttcctca 872
>gb|AE012498.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 406 of 460 of the complete genome Length = 12898 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 cagcggcgatgccagcgccagcgc 563 ||||||| |||||||||||||||| Sbjct: 3564 cagcggcaatgccagcgccagcgc 3587
>gb|AE012285.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 193 of 460 of the complete genome Length = 12749 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 456 gtcggcgccggcggaaacccccgcgccg 483 ||||||||||||||||| | |||||||| Sbjct: 9400 gtcggcgccggcggaaaacgccgcgccg 9427
>dbj|AK132453.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732419E23 product:unclassifiable, full insert sequence Length = 2993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gcgacatctgccaggagaag 330 |||||||||||||||||||| Sbjct: 2600 gcgacatctgccaggagaag 2619
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 cagcggcgatgccagcgccagcgc 563 ||||||| |||||||||||||||| Sbjct: 4544085 cagcggcaatgccagcgccagcgc 4544108 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 gtcggcgccggcggaaacccccgcgccg 483 ||||||||||||||||| | |||||||| Sbjct: 2847051 gtcggcgccggcggaaaacgccgcgccg 2847024
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggaggaggaagagaacagca 511 |||||||||||||||||||| Sbjct: 21154 ggaggaggaagagaacagca 21173
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 accgccgcgtccaccgcgcc 222 |||||||||||||||||||| Sbjct: 4565269 accgccgcgtccaccgcgcc 4565288 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gctgcgccgacgaggccgcg 186 |||||||||||||||||||| Sbjct: 1809160 gctgcgccgacgaggccgcg 1809141
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcgaggcggaggcggccacc 159 |||||||||||||||||||| Sbjct: 72695 gcgaggcggaggcggccacc 72714
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 accgccgcctgtccctcctc 261 |||||||||||||||||||| Sbjct: 158664 accgccgcctgtccctcctc 158645
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 accgccgcctgtccctcctc 261 |||||||||||||||||||| Sbjct: 7511 accgccgcctgtccctcctc 7492
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 gcgatgccagcgccagcgcgagcg 568 ||||||||||| |||||||||||| Sbjct: 526091 gcgatgccagcaccagcgcgagcg 526068
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgccgacgaggccgcgctg 189 |||||||||||||||||||| Sbjct: 263674 gcgccgacgaggccgcgctg 263655
>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tctccatcctcctcatcatc 287 |||||||||||||||||||| Sbjct: 981 tctccatcctcctcatcatc 962
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gccgctgcgacgccgacgac 534 |||||||||||||||||||| Sbjct: 3575709 gccgctgcgacgccgacgac 3575690
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgccggcaagcaccgccgcc 250 |||||||||||||||||||| Sbjct: 44303 cgccggcaagcaccgccgcc 44284
>gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, complete sequence Length = 154959 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gcgacatctgccaggagaag 330 |||||||||||||||||||| Sbjct: 36698 gcgacatctgccaggagaag 36679
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgaccgccgcgtccaccgcg 220 |||||||||||||||||||| Sbjct: 1720238 cgaccgccgcgtccaccgcg 1720257
>ref|NM_001034597.1| Bos taurus extracellular matrix protein 2, female organ and adipocyte specific (ECM2), mRNA Length = 2204 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tcctcctcatcatcgccttcctca 297 ||||||||||||||| |||||||| Sbjct: 895 tcctcctcatcatcgtcttcctca 872
>dbj|AB002337.2| Homo sapiens mRNA for KIAA0339 protein, partial cds Length = 6447 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggaggaggaagagaacagca 511 |||||||||||||||||||| Sbjct: 2219 ggaggaggaagagaacagca 2238 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,209,903 Number of Sequences: 3902068 Number of extensions: 4209903 Number of successful extensions: 122026 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116869 Number of HSP's gapped (non-prelim): 5146 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
