ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart40b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 93 cgatgccgtcgcgctcgctccgtgtcgccgtcatcggcgccggggccgccggtctggtgg 152 |||||||||| | |||||||| |||||||| ||||||| || |||||||| ||||||| Sbjct: 126518 cgatgccgtccccgtcgctccgcctcgccgtcgtcggcgcgggcgccgccggcctggtgg 126577 Query: 153 cggcgcgcgagctgcgacgcgaaggccacgcccccgtcgtgttcgagcgcacggacggcg 212 ||||||| ||||| || || || |||||| ||||||| |||||||||||| | | | || Sbjct: 126578 cggcgcgggagctccgccgggagggccactcccccgtggtgttcgagcgcgccgcctccg 126637 Query: 213 tgggcggcacctgggtctacgaagccg 239 |||||||||| ||| ||||||| |||| Sbjct: 126638 tgggcggcacgtggctctacgacgccg 126664 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 361 ggccggcgccgactgcgacatccgcaggttccccggccacgcggaggtgctccggtacct 420 |||||||| || | |||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 126792 ggccggcggcggcggcgacacgcgcaggttccccggccacgacgaggtgctccggtatct 126851 Query: 421 ccagagcttcgcgcggcggttcgacctccacggcctcgtccggctggagacggaggtggt 480 || |||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct: 126852 ggaggagttcgcgcggcggttcgacctgtacggcctcgtccgcttcgggacggaggtggt 126911 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttcctcgacttccc 354 ||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 126711 cctctacgcctcgctccgcaccaacctgccgcgggaggtgatgggcttcctcgactttcc 126770 Query: 355 cttcg 359 ||||| Sbjct: 126771 cttcg 126775 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttc 343 |||||||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 76964 cctctacgcgtcgctgcgcaccaacctgccgcgcgagctcatgggcttc 77012
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Minus Query: 93 cgatgccgtcgcgctcgctccgtgtcgccgtcatcggcgccggggccgccggtctggtgg 152 |||||||||| | |||||||| |||||||| ||||||| || |||||||| ||||||| Sbjct: 21207841 cgatgccgtccccgtcgctccgcctcgccgtcgtcggcgcgggcgccgccggcctggtgg 21207782 Query: 153 cggcgcgcgagctgcgacgcgaaggccacgcccccgtcgtgttcgagcgcacggacggcg 212 ||||||| ||||| || || || |||||| ||||||| |||||||||||| | | | || Sbjct: 21207781 cggcgcgggagctccgccgggagggccactcccccgtggtgttcgagcgcgccgcctccg 21207722 Query: 213 tgggcggcacctgggtctacgaagccg 239 |||||||||| ||| ||||||| |||| Sbjct: 21207721 tgggcggcacgtggctctacgacgccg 21207695 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 361 ggccggcgccgactgcgacatccgcaggttccccggccacgcggaggtgctccggtacct 420 |||||||| || | |||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 21207567 ggccggcggcggcggcgacacgcgcaggttccccggccacgacgaggtgctccggtatct 21207508 Query: 421 ccagagcttcgcgcggcggttcgacctccacggcctcgtccggctggagacggaggtggt 480 || |||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct: 21207507 ggaggagttcgcgcggcggttcgacctgtacggcctcgtccgcttcgggacggaggtggt 21207448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttcctcgacttccc 354 ||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 21207648 cctctacgcctcgctccgcaccaacctgccgcgggaggtgatgggcttcctcgactttcc 21207589 Query: 355 cttcg 359 ||||| Sbjct: 21207588 cttcg 21207584 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttc 343 |||||||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 21257395 cctctacgcgtcgctgcgcaccaacctgccgcgcgagctcatgggcttc 21257347
>dbj|AK120878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027I19, full insert sequence Length = 1760 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 93 cgatgccgtcgcgctcgctccgtgtcgccgtcatcggcgccggggccgccggtctggtgg 152 |||||||||| | |||||||| |||||||| ||||||| || |||||||| ||||||| Sbjct: 164 cgatgccgtccccgtcgctccgcctcgccgtcgtcggcgcgggcgccgccggcctggtgg 223 Query: 153 cggcgcgcgagctgcgacgcgaaggccacgcccccgtcgtgttcgagcgcacggacggcg 212 ||||||| ||||| || || || |||||| ||||||| |||||||||||| | | | || Sbjct: 224 cggcgcgggagctccgccgggagggccactcccccgtggtgttcgagcgcgccgcctccg 283 Query: 213 tgggcggcacctgggtctacgaagccg 239 |||||||||| ||| ||||||| |||| Sbjct: 284 tgggcggcacgtggctctacgacgccg 310 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 361 ggccggcgccgactgcgacatccgcaggttccccggccacgcggaggtgctccggtacct 420 |||||||| || | |||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 438 ggccggcggcggcggcgacacgcgcaggttccccggccacgacgaggtgctccggtatct 497 Query: 421 ccagagcttcgcgcggcggttcgacctccacggcctcgtccggctggagacggaggtggt 480 || |||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct: 498 ggaggagttcgcgcggcggttcgacctgtacggcctcgtccgcttcgggacggaggtggt 557 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttcctcgacttccc 354 ||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 357 cctctacgcctcgctccgcaccaacctgccgcgggaggtgatgggcttcctcgactttcc 416 Query: 355 cttcg 359 ||||| Sbjct: 417 cttcg 421
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Minus Query: 93 cgatgccgtcgcgctcgctccgtgtcgccgtcatcggcgccggggccgccggtctggtgg 152 |||||||||| | |||||||| |||||||| ||||||| || |||||||| ||||||| Sbjct: 21219105 cgatgccgtccccgtcgctccgcctcgccgtcgtcggcgcgggcgccgccggcctggtgg 21219046 Query: 153 cggcgcgcgagctgcgacgcgaaggccacgcccccgtcgtgttcgagcgcacggacggcg 212 ||||||| ||||| || || || |||||| ||||||| |||||||||||| | | | || Sbjct: 21219045 cggcgcgggagctccgccgggagggccactcccccgtggtgttcgagcgcgccgcctccg 21218986 Query: 213 tgggcggcacctgggtctacgaagccg 239 |||||||||| ||| ||||||| |||| Sbjct: 21218985 tgggcggcacgtggctctacgacgccg 21218959 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 361 ggccggcgccgactgcgacatccgcaggttccccggccacgcggaggtgctccggtacct 420 |||||||| || | |||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 21218831 ggccggcggcggcggcgacacgcgcaggttccccggccacgacgaggtgctccggtatct 21218772 Query: 421 ccagagcttcgcgcggcggttcgacctccacggcctcgtccggctggagacggaggtggt 480 || |||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct: 21218771 ggaggagttcgcgcggcggttcgacctgtacggcctcgtccgcttcgggacggaggtggt 21218712 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttcctcgacttccc 354 ||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 21218912 cctctacgcctcgctccgcaccaacctgccgcgggaggtgatgggcttcctcgactttcc 21218853 Query: 355 cttcg 359 ||||| Sbjct: 21218852 cttcg 21218848 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttc 343 |||||||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 21268659 cctctacgcgtcgctgcgcaccaacctgccgcgcgagctcatgggcttc 21268611
>ref|NM_197686.1| Oryza sativa (japonica cultivar-group) putative flavin-containing monooxygenase (OSJNBb0014I11.12), mRNA Length = 1512 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Plus Query: 107 tcgctccgtgtcgccgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctg 166 |||||||| |||||||| ||||||| || |||||||| |||||||||||||| ||||| Sbjct: 13 tcgctccgcctcgccgtcgtcggcgcgggcgccgccggcctggtggcggcgcgggagctc 72 Query: 167 cgacgcgaaggccacgcccccgtcgtgttcgagcgcacggacggcgtgggcggcacctgg 226 || || || |||||| ||||||| |||||||||||| | | | |||||||||||| ||| Sbjct: 73 cgccgggagggccactcccccgtggtgttcgagcgcgccgcctccgtgggcggcacgtgg 132 Query: 227 gtctacgaagccg 239 ||||||| |||| Sbjct: 133 ctctacgacgccg 145 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 361 ggccggcgccgactgcgacatccgcaggttccccggccacgcggaggtgctccggtacct 420 |||||||| || | |||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 273 ggccggcggcggcggcgacacgcgcaggttccccggccacgacgaggtgctccggtatct 332 Query: 421 ccagagcttcgcgcggcggttcgacctccacggcctcgtccggctggagacggaggtggt 480 || |||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct: 333 ggaggagttcgcgcggcggttcgacctgtacggcctcgtccgcttcgggacggaggtggt 392 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 295 cctctacgcgtccctccgcaccaacctcccgcgcgagtccatgggcttcctcgacttccc 354 ||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 192 cctctacgcctcgctccgcaccaacctgccgcgggaggtgatgggcttcctcgactttcc 251 Query: 355 cttcg 359 ||||| Sbjct: 252 cttcg 256
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 115 tgtcgccgtcatcggcgccggggccgccgg 144 |||||||||||||||||||||||||||||| Sbjct: 203537 tgtcgccgtcatcggcgccggggccgccgg 203566
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 115 tgtcgccgtcatcggcgccggggccgccgg 144 |||||||||||||||||||||||||||||| Sbjct: 117336 tgtcgccgtcatcggcgccggggccgccgg 117365
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 115 tgtcgccgtcatcggcgccggggccgccgg 144 |||||||||||||||||||||||||||||| Sbjct: 193133 tgtcgccgtcatcggcgccggggccgccgg 193162
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 151 ggcggcgcgcgagctgcgacgcgaaggc 178 |||||||||||||||||| ||||||||| Sbjct: 1036869 ggcggcgcgcgagctgcgccgcgaaggc 1036896
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 247 cgcgtccgcctcgccggagccgc 269 ||||||||||||||||||||||| Sbjct: 34249360 cgcgtccgcctcgccggagccgc 34249338 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgccgacgcgtccgcctcgc 260 |||||||||||||||||||| Sbjct: 25020080 cgccgacgcgtccgcctcgc 25020099 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 22369518 atcggcgccgggatggccgggctggcggcggcgcgggagctgcg 22369561
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 251 tccgcctcgccggagccgcccgg 273 ||||||||||||||||||||||| Sbjct: 4138346 tccgcctcgccggagccgcccgg 4138324
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 247 cgcgtccgcctcgccggagccgc 269 ||||||||||||||||||||||| Sbjct: 84633 cgcgtccgcctcgccggagccgc 84611
>ref|NM_189713.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 900 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 cgccgacgcgtccgcctcgccg 262 |||||||||||||||||||||| Sbjct: 404 cgccgacgcgtccgcctcgccg 383
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 cgccgacgcgtccgcctcgccg 262 |||||||||||||||||||||| Sbjct: 41355666 cgccgacgcgtccgcctcgccg 41355645 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ccccttcgtggccggcgccgactgc 376 ||||||||| ||||||||||||||| Sbjct: 8017805 ccccttcgtcgccggcgccgactgc 8017781 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 15067520 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 15067567 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 1637762 cgacgccgcttcctcttgtc 1637743
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 cgccgacgcgtccgcctcgccg 262 |||||||||||||||||||||| Sbjct: 47159 cgccgacgcgtccgcctcgccg 47138
>gb|AE004797.1| Pseudomonas aeruginosa PAO1, section 358 of 529 of the complete genome Length = 12378 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 ggtgagcagggaggcgagcggg 505 |||||||||||||||||||||| Sbjct: 8325 ggtgagcagggaggcgagcggg 8304
>ref|NM_105018.1| Arabidopsis thaliana monooxygenase AT1G63390 mRNA, complete cds Length = 394 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcgacgcgaagg 177 ||||||||||| |||||||| | || |||||||| ||||| ||||| ||||| Sbjct: 62 atcggcgccggagccgccggattagtagcggcgcgagagcttcgacgggaagg 114
>ref|NM_188751.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ccccttcgtggccggcgccgactgc 376 ||||||||| ||||||||||||||| Sbjct: 525 ccccttcgtcgccggcgccgactgc 549
>ref|NM_194108.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 326 cgcgagtccatgggcttcctcgacttccccttc 358 |||||| ||||||||||| ||||||||||||| Sbjct: 256 cgcgaggccatgggcttcaccgacttccccttc 288
>ref|XM_596756.2| PREDICTED: Bos taurus similar to heparan sulfate 6-O-sulfotransferase (LOC518563), mRNA Length = 940 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gcgtccccccgcgacgccgcttcct 61 |||||||||||||||| |||||||| Sbjct: 866 gcgtccccccgcgacggcgcttcct 842
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 gccgccggtctggtggcggcgcgcg 161 ||||||| ||||||||||||||||| Sbjct: 5089983 gccgccgctctggtggcggcgcgcg 5090007
>emb|AJ842761.1| Actinoplanes teichomyceticus murE gene (partial), murF gene, mraY gene and ftsW gene Length = 4749 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 cgtgttcgagcgcacggacggcgtg 214 ||||||||||||| ||||||||||| Sbjct: 1855 cgtgttcgagcgcccggacggcgtg 1879
>gb|AY128298.1| Arabidopsis thaliana At1g63380/F2K11_25 mRNA sequence Length = 1959 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcgacgcgaagg 177 ||||||||||| |||||||| | || |||||||| ||||| ||||| ||||| Sbjct: 1758 atcggcgccggagccgccggattagtagcggcgcgagagcttcgacgggaagg 1706
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ccccttcgtggccggcgccgactgc 376 ||||||||| ||||||||||||||| Sbjct: 14456 ccccttcgtcgccggcgccgactgc 14432
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 tcatcggcgccggggccgccg 143 ||||||||||||||||||||| Sbjct: 163259 tcatcggcgccggggccgccg 163279
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 326 cgcgagtccatgggcttcctcgacttccccttc 358 |||||| ||||||||||| ||||||||||||| Sbjct: 684726 cgcgaggccatgggcttcaccgacttccccttc 684758 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 27214864 cgacgccgcttcctcttgtc 27214883
>gb|AC022355.5|AC022355 Arabidopsis thaliana chromosome 1 BAC F9N12 genomic sequence, complete sequence Length = 67712 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcgacgcgaagg 177 ||||||||||| |||||||| | || |||||||| ||||| ||||| ||||| Sbjct: 1905 atcggcgccggagccgccggattagtagcggcgcgagagcttcgacgggaagg 1957
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccgcctcgccggagccgcccg 272 ||||||||||||||||||||| Sbjct: 5744483 ccgcctcgccggagccgcccg 5744503
>gb|AY084698.1| Arabidopsis thaliana clone 115376 mRNA, complete sequence Length = 1457 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcgacgcgaagg 177 ||||||||||| |||||||| | || |||||||| ||||| ||||| ||||| Sbjct: 69 atcggcgccggagccgccggattagtagcggcgcgagagcttcgacgggaagg 121
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ccccttcgtggccggcgccgactgc 376 ||||||||| ||||||||||||||| Sbjct: 124117 ccccttcgtcgccggcgccgactgc 124093
>gb|AC008047.3|AC008047 Genomic sequence for Arabidopsis thaliana BAC F2K11 from chromosome I, complete sequence Length = 100867 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcgacgcgaagg 177 ||||||||||| |||||||| | || |||||||| ||||| ||||| ||||| Sbjct: 89909 atcggcgccggagccgccggattagtagcggcgcgagagcttcgacgggaagg 89961
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 326 cgcgagtccatgggcttcctcgacttccccttc 358 |||||| ||||||||||| ||||||||||||| Sbjct: 23257 cgcgaggccatgggcttcaccgacttccccttc 23289
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 326 cgcgagtccatgggcttcctcgacttccccttc 358 |||||| ||||||||||| ||||||||||||| Sbjct: 4533 cgcgaggccatgggcttcaccgacttccccttc 4565
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gacggcgtgggcggcacctgg 226 ||||||||||||||||||||| Sbjct: 3991052 gacggcgtgggcggcacctgg 3991072
>ref|NM_106107.2| Arabidopsis thaliana geranylgeranyl reductase AT1G74470 mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 249 ctccgtgtcgccgtcatcgg 268
>ref|XM_550006.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 656 cgacgccgcttcctcttgtc 637
>ref|XM_480847.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 1040 cgacgccgcttcctcttgtc 1021
>ref|XM_479359.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 1115 cgacgccgcttcctcttgtc 1096
>ref|XM_590712.2| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 11 isoform 3, transcript variant 1 (LOC539986), mRNA Length = 4269 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gcccggtggcccccggcggc 287 |||||||||||||||||||| Sbjct: 350 gcccggtggcccccggcggc 369
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ccgatgccgtcgcgctcgct 111 |||||||||||||||||||| Sbjct: 3115943 ccgatgccgtcgcgctcgct 3115924
>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete sequence Length = 129440 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cgaggaaggcgtccggcggc 547 |||||||||||||||||||| Sbjct: 61754 cgaggaaggcgtccggcggc 61735 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 gccgacgccgacgcgtccgcctcgccgg 263 |||| ||||| ||||||||||||||||| Sbjct: 55372 gccgccgccgccgcgtccgcctcgccgg 55345
>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence Length = 40150 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggtggcggcgcgcgagctgc 167 |||||||||||||||||||| Sbjct: 39897 ggtggcggcgcgcgagctgc 39916
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gtggcggcgcgcgagctgcg 168 |||||||||||||||||||| Sbjct: 42138 gtggcggcgcgcgagctgcg 42119
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 cgtgtcgccgtcatcggcgccggggccg 140 ||||||||||||| |||||| ||||||| Sbjct: 2397955 cgtgtcgccgtcaccggcgcaggggccg 2397928
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cgaggaaggcgtccggcggc 547 |||||||||||||||||||| Sbjct: 29229939 cgaggaaggcgtccggcggc 29229920 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 gccgacgccgacgcgtccgcctcgccgg 263 |||| ||||| ||||||||||||||||| Sbjct: 29223557 gccgccgccgccgcgtccgcctcgccgg 29223530
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 gccgacgccgacgcgtccgcctcgccgg 263 |||| ||||| ||||||||||||||||| Sbjct: 132443 gccgccgccgccgcgtccgcctcgccgg 132470 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cgaggaaggcgtccggcggc 547 |||||||||||||||||||| Sbjct: 126061 cgaggaaggcgtccggcggc 126080
>gb|AY502076.1| Rhodococcus sp. DK17 plasmid pDK3, partial sequence Length = 104578 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 cgtgtcgccgtcatcggcgccggggccgccgg 144 ||||||||||||||||||| ||| ||| |||| Sbjct: 58148 cgtgtcgccgtcatcggcgtcggtgccaccgg 58179
>ref|NG_000018.1| Homo sapiens type I (acidic) hair keratin gene cluster (KRTHA.1@) on chromosome 17 Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 488 agcagggaggcgagcggggccagctggc 515 |||||||||| ||| ||||||||||||| Sbjct: 99353 agcagggaggagaggggggccagctggc 99326
>emb|CR722903.2|CNS0GKQL Tetraodon nigroviridis full-length cDNA Length = 544 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 agccgacgccgacgcgtccg 254 |||||||||||||||||||| Sbjct: 452 agccgacgccgacgcgtccg 433
>emb|CR672293.2|CNS0FHPN Tetraodon nigroviridis full-length cDNA Length = 917 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 agccgacgccgacgcgtccg 254 |||||||||||||||||||| Sbjct: 825 agccgacgccgacgcgtccg 806
>emb|CR668736.2|CNS0FEYU Tetraodon nigroviridis full-length cDNA Length = 1366 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 agccgacgccgacgcgtccg 254 |||||||||||||||||||| Sbjct: 1274 agccgacgccgacgcgtccg 1255
>emb|CR666625.2|CNS0FDC7 Tetraodon nigroviridis full-length cDNA Length = 1366 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 agccgacgccgacgcgtccg 254 |||||||||||||||||||| Sbjct: 1274 agccgacgccgacgcgtccg 1255
>emb|CR661245.2|CNS0F96R Tetraodon nigroviridis full-length cDNA Length = 958 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 agccgacgccgacgcgtccg 254 |||||||||||||||||||| Sbjct: 866 agccgacgccgacgcgtccg 847
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tcgccgtcatcggcgccggg 136 |||||||||||||||||||| Sbjct: 4329392 tcgccgtcatcggcgccggg 4329373
>ref|XM_502357.1| Yarrowia lipolytica CLIB122, YALI0D03245g predicted mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ccatgggcttcctcgacttc 352 |||||||||||||||||||| Sbjct: 182 ccatgggcttcctcgacttc 201
>gb|BT000734.1| Arabidopsis thaliana clone RAFL08-12-D18 (R11300) putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1602 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 200 ctccgtgtcgccgtcatcgg 219
>gb|BT000656.1| Arabidopsis thaliana clone RAFL07-09-F13 (R10827) putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 236 ctccgtgtcgccgtcatcgg 255
>emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D12 on chromosome 6q26-27 Contains the 5' end of the gene for KIAA1838, the DLL1 gene for delta-like 1 (mouse) homolog, the 3' end of a novel gene and 5 CpG islands, complete sequence Length = 119563 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gccgtcatcggcgccggggccgcc 142 ||||||||| |||||||||||||| Sbjct: 96265 gccgtcatctgcgccggggccgcc 96288
>gb|AY091297.1| Arabidopsis thaliana putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1435 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 166 ctccgtgtcgccgtcatcgg 185
>gb|AY050893.1| Arabidopsis thaliana putative geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 236 ctccgtgtcgccgtcatcgg 255
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gtggcggcgcgcgagctgcg 168 |||||||||||||||||||| Sbjct: 1401532 gtggcggcgcgcgagctgcg 1401513
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 83572 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 83619
>gb|AY102144.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1404 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 166 ctccgtgtcgccgtcatcgg 185
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccgg 144 ||||||||||||||| |||||||| Sbjct: 728709 cgtcatcggcgccggagccgccgg 728732
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gtcgccgtcatcggcgccgg 135 |||||||||||||||||||| Sbjct: 384023 gtcgccgtcatcggcgccgg 384004
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ggccgccggtctggtggcggcgcg 159 |||||||| ||||||||||||||| Sbjct: 1775318 ggccgccgatctggtggcggcgcg 1775295
>gb|AY075688.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1579 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 214 ctccgtgtcgccgtcatcgg 233
>gb|AY059860.1| Arabidopsis thaliana geranylgeranyl reductase (At1g74470; F1M20.15) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 236 ctccgtgtcgccgtcatcgg 255
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 gtcgccgtcatcggcgccggggccgccg 143 ||||||||||| ||||||| |||||||| Sbjct: 4155139 gtcgccgtcatgggcgccgaggccgccg 4155166
>gb|AY052328.1| Arabidopsis thaliana At1g74470/F1M20_15 mRNA, complete cds Length = 1612 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 229 ctccgtgtcgccgtcatcgg 248
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggtggcggcgcgcgagctgc 167 |||||||||||||||||||| Sbjct: 1165136 ggtggcggcgcgcgagctgc 1165155
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 21291 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 21338
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gtggcggcgcgcgagctgcg 168 |||||||||||||||||||| Sbjct: 1232333 gtggcggcgcgcgagctgcg 1232352
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 8180051 cgacgccgcttcctcttgtc 8180032
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cgaggaaggcgtccggcggc 547 |||||||||||||||||||| Sbjct: 29321315 cgaggaaggcgtccggcggc 29321296 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 gccgacgccgacgcgtccgcctcgccgg 263 |||| ||||| ||||||||||||||||| Sbjct: 29314933 gccgccgccgccgcgtccgcctcgccgg 29314906
>gb|AC003958.2| Homo sapiens chromosome 17, clone RP5-18F17, complete sequence Length = 127833 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 488 agcagggaggcgagcggggccagctggc 515 |||||||||| ||| ||||||||||||| Sbjct: 99352 agcagggaggagaggggggccagctggc 99325
>emb|BX816645.1|CNS0ABQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1611 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 216 ctccgtgtcgccgtcatcgg 235
>dbj|AB072929.1| Oryzias latipes olmt3-mmp mRNA for membrane-type matrix metalloproteinase, complete cds Length = 2672 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccgtgtcgccgtcatcggc 130 |||||||||||||||||||| Sbjct: 1869 tccgtgtcgccgtcatcggc 1850
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete sequence Length = 134402 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 47733 ctccgtgtcgccgtcatcgg 47752
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 97098 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 97145
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 93767 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 93814
>gb|BT002571.1| Arabidopsis thaliana geranylgeranyl reductase (At1g74470) mRNA, complete cds Length = 1555 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 166 ctccgtgtcgccgtcatcgg 185
>gb|AF211976.1|AF211976 Homo sapiens LENG9 mRNA, partial sequence Length = 727 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acgcgtccgcctcgccggag 265 |||||||||||||||||||| Sbjct: 4 acgcgtccgcctcgccggag 23
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 128162 atcggcgccgggatggccgggctggcggcggcgcgggagctgcg 128205
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 125 atcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||||||||||| ||||| |||| ||||||||| |||||||| Sbjct: 25737 atcggcgccgggatggccgggctggcggcggcgcgggagctgcg 25780
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 cgtcatcggcgccggggccgccggtctggtggcggcgcgcgagctgcg 168 |||| ||||||||||| || || |||| |||||||||||||||||| Sbjct: 39486 cgtcgtcggcgccgggatggcggggctggcggcggcgcgcgagctgcg 39533
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 74993 cgacgccgcttcctcttgtc 74974
>dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0030A22 Length = 141096 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 6732 cgacgccgcttcctcttgtc 6751
>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084D17 Length = 143931 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 80083 cgacgccgcttcctcttgtc 80102
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgccgacgcgtccgcctcgc 260 |||||||||||||||||||| Sbjct: 33068 cgccgacgcgtccgcctcgc 33087
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 148362 cgacgccgcttcctcttgtc 148343
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_H02 Length = 117860 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgccgcttcctcttgtc 67 |||||||||||||||||||| Sbjct: 12733 cgacgccgcttcctcttgtc 12714
>dbj|AK120539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F07, full insert sequence Length = 1970 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 gccgacgccgacgcgtccgcctcgccgg 263 |||| ||||| ||||||||||||||||| Sbjct: 239 gccgccgccgccgcgtccgcctcgccgg 212
>emb|Y14044.1|ATGGREDU Arabidopsis thaliana mRNA for geranylgeranyl reductase Length = 1497 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccgtgtcgccgtcatcgg 129 |||||||||||||||||||| Sbjct: 181 ctccgtgtcgccgtcatcgg 200
>ref|NM_211949.1| Eremothecium gossypii AGR221Wp (AGR221W), mRNA Length = 552 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggtggcggcgcgcgagctgc 167 |||||||||||||||||||| Sbjct: 306 ggtggcggcgcgcgagctgc 325
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cttcgtggccggcgccgact 374 |||||||||||||||||||| Sbjct: 3711037 cttcgtggccggcgccgact 3711018
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ccatgggcttcctcgacttc 352 |||||||||||||||||||| Sbjct: 412862 ccatgggcttcctcgacttc 412881
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 tcgtgttcgagcgcacggacggcg 212 |||||||||||||||| ||||||| Sbjct: 59625 tcgtgttcgagcgcaccgacggcg 59602 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,037,356 Number of Sequences: 3902068 Number of extensions: 3037356 Number of successful extensions: 80719 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76538 Number of HSP's gapped (non-prelim): 4171 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
