Clone Name | bart40b05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y5621_ARATH (O81488) PHD finger protein At5g26210 | 196 | 4e-50 | 2 | ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein | 32 | 1.7 | 3 | ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein | 32 | 1.7 | 4 | ATG11_NEUCR (Q7S055) Autophagy-related protein 11 | 30 | 4.9 | 5 | ISY1_KLULA (Q6CJQ3) Pre-mRNA-splicing factor ISY1 | 30 | 6.4 |
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>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 196 bits (498), Expect = 4e-50 Identities = 89/141 (63%), Positives = 115/141 (81%), Gaps = 2/141 (1%) Frame = +1 Query: 151 PRTVEDIFKDYRARRNAIHRALTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVP 330 PRTVE++F+D++ RR + +ALT DV+EF+ CDPEKENLCLYG+ NE WEV LPAEEVP Sbjct: 9 PRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEVP 68 Query: 331 TELPEPALGINFARDGMKRSDWLALVAVHSDSWLVSVAFYYAAR--LTRNDRKRLFGMMN 504 ELPEP LGINFARDGM DWL+LVAVHSD+WL++VAF++ AR + DRKRLF M+N Sbjct: 69 PELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVN 128 Query: 505 DLPTVYEVISGMRQSKERDRS 567 DLPT++EV++G + + +D+S Sbjct: 129 DLPTIFEVVAGTAKKQGKDKS 149
>ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein| Length = 610 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 214 LTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVPTELPEPA 351 +T ++EEFY+ CD E + L + W V EVP P+PA Sbjct: 282 ITKEIEEFYSLCD-EMDLQALPLPLEDGWTVDASNFEVPCSSPQPA 326
>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein| Length = 612 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 214 LTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVPTELPEPA 351 +T ++EEFY+ CD E + L + W V EVP P+PA Sbjct: 287 ITKEIEEFYSLCD-EMDLQALPLPLEDGWTVDASNFEVPCSSPQPA 331
>ATG11_NEUCR (Q7S055) Autophagy-related protein 11| Length = 1300 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 292 EAWEVALPAEEVPTELPEPALGI 360 + WE PA++VPTELP+ GI Sbjct: 685 DIWECLAPADDVPTELPDLLEGI 707
>ISY1_KLULA (Q6CJQ3) Pre-mRNA-splicing factor ISY1| Length = 237 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 475 DRKRLFGMMNDLPTVYEVISGMRQSKERDRSG 570 D KR FG +LP V +++ ++ +E++RSG Sbjct: 120 DGKRYFGRALELPEVQKLLRESKEQREKERSG 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,457,124 Number of Sequences: 219361 Number of extensions: 809141 Number of successful extensions: 2206 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2205 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)