ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40b05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 551 bits (278), Expect = e-154 Identities = 395/434 (91%) Strand = Plus / Plus Query: 133 ggcggcggcggctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgc 192 ||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 49 ggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgc 108 Query: 193 cgcaacgccatccaccgcgctctcacccacgacgtcgaggagttctacgcgcagtgcgat 252 |||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 109 cgcaccgccatcctccgcgccctcacccacgacgtcgaggatttctacgcgcagtgcgat 168 Query: 253 ccagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctg 312 |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 169 ccagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctg 228 Query: 313 cccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgc 372 || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 229 ccggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgc 288 Query: 373 gacggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggctt 432 ||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 289 gacgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctc 348 Query: 433 gtctccgtagccttctactatgccgcgcggctcactcgcaacgaccggaagcgtttattt 492 |||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| ||| Sbjct: 349 gtctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccggaagcgtttgttt 408 Query: 493 ggcatgatgaatgatttgccaaccgtgtatgaagtcatctcaggcatgagacaatcgaag 552 ||||||||||||||||||||||| || || |||||| | || || |||||||| ||| Sbjct: 409 ggcatgatgaatgatttgccaactgtttacgaagtcgtatctggttcaagacaatctaag 468 Query: 553 gagagggacagatc 566 |||||||||||||| Sbjct: 469 gagagggacagatc 482
>dbj|AK071548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104P18, full insert sequence Length = 1109 Score = 551 bits (278), Expect = e-154 Identities = 395/434 (91%) Strand = Plus / Plus Query: 133 ggcggcggcggctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgc 192 ||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 154 ggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgc 213 Query: 193 cgcaacgccatccaccgcgctctcacccacgacgtcgaggagttctacgcgcagtgcgat 252 |||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 214 cgcaccgccatcctccgcgccctcacccacgacgtcgaggatttctacgcgcagtgcgat 273 Query: 253 ccagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctg 312 |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 274 ccagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctg 333 Query: 313 cccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgc 372 || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 334 ccggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgc 393 Query: 373 gacggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggctt 432 ||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 394 gacgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctc 453 Query: 433 gtctccgtagccttctactatgccgcgcggctcactcgcaacgaccggaagcgtttattt 492 |||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| ||| Sbjct: 454 gtctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccggaagcgtttgttt 513 Query: 493 ggcatgatgaatgatttgccaaccgtgtatgaagtcatctcaggcatgagacaatcgaag 552 ||||||||||||||||||||||| || || |||||| | || || |||||||| ||| Sbjct: 514 ggcatgatgaatgatttgccaactgtttacgaagtcgtatctggttcaagacaatctaag 573 Query: 553 gagagggacagatc 566 |||||||||||||| Sbjct: 574 gagagggacagatc 587
>dbj|AK061479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G07, full insert sequence Length = 1172 Score = 343 bits (173), Expect = 4e-91 Identities = 218/233 (93%) Strand = Plus / Plus Query: 133 ggcggcggcggctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgc 192 ||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 159 ggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgc 218 Query: 193 cgcaacgccatccaccgcgctctcacccacgacgtcgaggagttctacgcgcagtgcgat 252 |||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 219 cgcaccgccatcctccgcgccctcacccacgacgtcgaggatttctacgcgcagtgcgat 278 Query: 253 ccagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctg 312 |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 279 ccagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctg 338 Query: 313 cccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactt 365 || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 ccggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactt 391 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 455 ccgcgcggctcactcgcaacgaccggaagcgtttatttggcatgatgaatgatttgccaa 514 ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 395 ccgcgcgcctcaaccgcaacgaccggaagcgtttgtttggcatgatgaatgatttgccaa 454 Query: 515 ccgtgtatgaagtcatctcaggcatgagacaatcgaaggagagggacagatc 566 | || || |||||| | || || |||||||| ||||||||||||||||| Sbjct: 455 ctgtttacgaagtcgtatctggttcaagacaatctaaggagagggacagatc 506
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 315 bits (159), Expect = 9e-83 Identities = 210/227 (92%) Strand = Plus / Minus Query: 254 cagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgc 313 ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 63845 cagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctgc 63786 Query: 314 ccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcg 373 | |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 63785 cggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgcg 63726 Query: 374 acggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttg 433 |||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 63725 acgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctcg 63666 Query: 434 tctccgtagccttctactatgccgcgcggctcactcgcaacgaccgg 480 ||||||| ||||||||||| |||||||| |||| |||||||||||| Sbjct: 63665 tctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccgg 63619 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 133 ggcggcggcggctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgc 192 ||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 64153 ggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgc 64094 Query: 193 cgcaacgccatccaccgcgctctcacccacg 223 |||| |||||||| |||||| |||||||||| Sbjct: 64093 cgcaccgccatcctccgcgccctcacccacg 64063 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 479 ggaagcgtttatttggcatgatgaatgatttgccaaccgtgtatgaagtcatctcaggca 538 |||||||||| |||||||||||||||||||||||||| || || |||||| | || || Sbjct: 60552 ggaagcgtttgtttggcatgatgaatgatttgccaactgtttacgaagtcgtatctggtt 60493 Query: 539 tgagacaatcgaaggagagggacagatc 566 |||||||| ||||||||||||||||| Sbjct: 60492 caagacaatctaaggagagggacagatc 60465 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 223 gacgtcgaggagttctacgcgcagtgcgatccag 256 ||||||||||| |||||||||||||||||||||| Sbjct: 63972 gacgtcgaggatttctacgcgcagtgcgatccag 63939
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 315 bits (159), Expect = 9e-83 Identities = 210/227 (92%) Strand = Plus / Minus Query: 254 cagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgc 313 ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 3641498 cagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctgc 3641439 Query: 314 ccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcg 373 | |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 3641438 cggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgcg 3641379 Query: 374 acggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttg 433 |||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 3641378 acgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctcg 3641319 Query: 434 tctccgtagccttctactatgccgcgcggctcactcgcaacgaccgg 480 ||||||| ||||||||||| |||||||| |||| |||||||||||| Sbjct: 3641318 tctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccgg 3641272 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 133 ggcggcggcggctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgc 192 ||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 3641806 ggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgc 3641747 Query: 193 cgcaacgccatccaccgcgctctcacccacg 223 |||| |||||||| |||||| |||||||||| Sbjct: 3641746 cgcaccgccatcctccgcgccctcacccacg 3641716 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 479 ggaagcgtttatttggcatgatgaatgatttgccaaccgtgtatgaagtcatctcaggca 538 |||||||||| |||||||||||||||||||||||||| || || |||||| | || || Sbjct: 3638205 ggaagcgtttgtttggcatgatgaatgatttgccaactgtttacgaagtcgtatctggtt 3638146 Query: 539 tgagacaatcgaaggagagggacagatc 566 |||||||| ||||||||||||||||| Sbjct: 3638145 caagacaatctaaggagagggacagatc 3638118 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 223 gacgtcgaggagttctacgcgcagtgcgatccag 256 ||||||||||| |||||||||||||||||||||| Sbjct: 3641625 gacgtcgaggatttctacgcgcagtgcgatccag 3641592 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 11931070 tgcgggcggcggcggcggctc 11931090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 11925867 tgcgggcggcggcggcggctc 11925887 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 28559364 ggtgcgggcggcggcggcgg 28559383 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 27433167 ggcggcggcggcggctcagc 27433186 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 254 cagagaaggagaacttgtgcctgtacgggtac 285 |||| ||||||||||||||||| || |||||| Sbjct: 20399207 cagaaaaggagaacttgtgcctttatgggtac 20399238
>ref|XM_477202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 679 Score = 212 bits (107), Expect = 9e-52 Identities = 248/295 (84%) Strand = Plus / Plus Query: 154 cgcactgtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgct 213 ||||| |||||||||||||||||||||| | || ||||||| || | || |||||| Sbjct: 101 cgcaccgtcgaggacatcttcaaggacttctccggccgccgcgccggcctcgtccgcgcc 160 Query: 214 ctcacccacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgc 273 |||||| ||| || || |||||||||| ||||| |||||||||||||| |||||| Sbjct: 161 ctcaccgtcgatgtggatgagttctacggattctgcgacccagagaaggagaatttgtgc 220 Query: 274 ctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggtgcccacc 333 ||||||||| || | |||| | |||||||||||||||||| |||||||||||||| | Sbjct: 221 ctgtacgggcacccgaacgggcggtgggaggtggcgctgccggcggaggaggtgccgccg 280 Query: 334 gagctgccggagccggcgctcgggatcaactttgcgcgcgacggcatgaagcgcagcgac 393 |||||||||||||||||||||||||||||||| || | ||||| ||| | ||| ||||| Sbjct: 281 gagctgccggagccggcgctcgggatcaacttcgccagggacgggatgcaccgccgcgac 340 Query: 394 tggctcgcgctcgtcgccgtccactccgattcgtggcttgtctccgtagccttct 448 |||||| |||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct: 341 tggctctcgctcgtcgccgtccactccgactcgtggctgctctccgtcgccttct 395
>ref|NM_186688.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 212 bits (107), Expect = 9e-52 Identities = 248/295 (84%) Strand = Plus / Plus Query: 154 cgcactgtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgct 213 ||||| |||||||||||||||||||||| | || ||||||| || | || |||||| Sbjct: 106 cgcaccgtcgaggacatcttcaaggacttctccggccgccgcgccggcctcgtccgcgcc 165 Query: 214 ctcacccacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgc 273 |||||| ||| || || |||||||||| ||||| |||||||||||||| |||||| Sbjct: 166 ctcaccgtcgatgtggatgagttctacggattctgcgacccagagaaggagaatttgtgc 225 Query: 274 ctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggtgcccacc 333 ||||||||| || | |||| | |||||||||||||||||| |||||||||||||| | Sbjct: 226 ctgtacgggcacccgaacgggcggtgggaggtggcgctgccggcggaggaggtgccgccg 285 Query: 334 gagctgccggagccggcgctcgggatcaactttgcgcgcgacggcatgaagcgcagcgac 393 |||||||||||||||||||||||||||||||| || | ||||| ||| | ||| ||||| Sbjct: 286 gagctgccggagccggcgctcgggatcaacttcgccagggacgggatgcaccgccgcgac 345 Query: 394 tggctcgcgctcgtcgccgtccactccgattcgtggcttgtctccgtagccttct 448 |||||| |||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct: 346 tggctctcgctcgtcgccgtccactccgactcgtggctgctctccgtcgccttct 400
>dbj|AK111142.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E03, full insert sequence Length = 679 Score = 212 bits (107), Expect = 9e-52 Identities = 248/295 (84%) Strand = Plus / Plus Query: 154 cgcactgtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgct 213 ||||| |||||||||||||||||||||| | || ||||||| || | || |||||| Sbjct: 101 cgcaccgtcgaggacatcttcaaggacttctccggccgccgcgccggcctcgtccgcgcc 160 Query: 214 ctcacccacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgc 273 |||||| ||| || || |||||||||| ||||| |||||||||||||| |||||| Sbjct: 161 ctcaccgtcgatgtggatgagttctacggattctgcgacccagagaaggagaatttgtgc 220 Query: 274 ctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggtgcccacc 333 ||||||||| || | |||| | |||||||||||||||||| |||||||||||||| | Sbjct: 221 ctgtacgggcacccgaacgggcggtgggaggtggcgctgccggcggaggaggtgccgccg 280 Query: 334 gagctgccggagccggcgctcgggatcaactttgcgcgcgacggcatgaagcgcagcgac 393 |||||||||||||||||||||||||||||||| || | ||||| ||| | ||| ||||| Sbjct: 281 gagctgccggagccggcgctcgggatcaacttcgccagggacgggatgcaccgccgcgac 340 Query: 394 tggctcgcgctcgtcgccgtccactccgattcgtggcttgtctccgtagccttct 448 |||||| |||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct: 341 tggctctcgctcgtcgccgtccactccgactcgtggctgctctccgtcgccttct 395
>dbj|AK073637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048B22, full insert sequence Length = 1155 Score = 204 bits (103), Expect = 2e-49 Identities = 247/295 (83%) Strand = Plus / Plus Query: 154 cgcactgtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgct 213 ||||| |||||||||||||||||||||| | || ||||||| || | || |||||| Sbjct: 106 cgcaccgtcgaggacatcttcaaggacttctccggccgccgcgccggcctcgtccgcgcc 165 Query: 214 ctcacccacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgc 273 |||||| ||| || || |||||||||| ||||| |||||||||||||| |||||| Sbjct: 166 ctcaccgtcgatgtggatgagttctacggattctgcgacccagagaaggagaatttgtgc 225 Query: 274 ctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggtgcccacc 333 ||||||||| || |||| | |||||||||||||||||| |||||||||||||| | Sbjct: 226 ctgtacgggcaccggaacgggcggtgggaggtggcgctgccggcggaggaggtgccgccg 285 Query: 334 gagctgccggagccggcgctcgggatcaactttgcgcgcgacggcatgaagcgcagcgac 393 |||||||||||||||||||||||||||||||| || | ||||| ||| | ||| ||||| Sbjct: 286 gagctgccggagccggcgctcgggatcaacttcgccagggacgggatgcaccgccgcgac 345 Query: 394 tggctcgcgctcgtcgccgtccactccgattcgtggcttgtctccgtagccttct 448 |||||| |||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct: 346 tggctctcgctcgtcgccgtccactccgactcgtggctgctctccgtcgccttct 400
>ref|XM_470117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 198 bits (100), Expect = 1e-47 Identities = 190/220 (86%) Strand = Plus / Plus Query: 247 tgcgatccagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtg 306 ||||| ||||| |||||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 231 tgcgacccagataaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtg 290 Query: 307 gcgctgcccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttt 366 |||||||| |||||||||||||| | |||||||| |||||||||||||| |||||||| Sbjct: 291 gcgctgccggcggaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttc 350 Query: 367 gcgcgcgacggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcg 426 || |||||||| ||||| ||| | ||||||||| | |||||||||||||||||||| ||| Sbjct: 351 gcccgcgacgggatgaaccgccgggactggctctccctcgtcgccgtccactccgactcg 410 Query: 427 tggcttgtctccgtagccttctactatgccgcgcggctca 466 ||||| |||||||| ||||||| || ||||||||||||| Sbjct: 411 tggctcgtctccgtcgccttcttcttcgccgcgcggctca 450
>dbj|AK103363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N11, full insert sequence Length = 1202 Score = 198 bits (100), Expect = 1e-47 Identities = 190/220 (86%) Strand = Plus / Plus Query: 247 tgcgatccagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtg 306 ||||| ||||| |||||||| |||||||||||||| |||||||| | ||||||||| Sbjct: 241 tgcgacccagataaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtg 300 Query: 307 gcgctgcccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttt 366 |||||||| |||||||||||||| | |||||||| |||||||||||||| |||||||| Sbjct: 301 gcgctgccggcggaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttc 360 Query: 367 gcgcgcgacggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcg 426 || |||||||| ||||| ||| | ||||||||| | |||||||||||||||||||| ||| Sbjct: 361 gcccgcgacgggatgaaccgccgggactggctctccctcgtcgccgtccactccgactcg 420 Query: 427 tggcttgtctccgtagccttctactatgccgcgcggctca 466 ||||| |||||||| ||||||| || ||||||||||||| Sbjct: 421 tggctcgtctccgtcgccttcttcttcgccgcgcggctca 460
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Minus Query: 254 cagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgc 313 ||||||||||||| ||||||||||||||| || | |||| | ||||||||||||||||| Sbjct: 7449796 cagagaaggagaatttgtgcctgtacgggcacccgaacgggcggtgggaggtggcgctgc 7449737 Query: 314 ccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcg 373 | |||||||||||||| | |||||||||||||||||||||||||||||||| || | | Sbjct: 7449736 cggcggaggaggtgccgccggagctgccggagccggcgctcgggatcaacttcgccaggg 7449677 Query: 374 acggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttg 433 |||| ||| | ||| ||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 7449676 acgggatgcaccgccgcgactggctctcgctcgtcgccgtccactccgactcgtggctgc 7449617 Query: 434 tctccgtagccttct 448 ||||||| ||||||| Sbjct: 7449616 tctccgtcgccttct 7449602 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 154 cgcactgtcgaggacatcttcaaggact 181 ||||| |||||||||||||||||||||| Sbjct: 7450111 cgcaccgtcgaggacatcttcaaggact 7450084 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 21790004 ggtgcgggcggcggcggcgg 21789985
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Minus Query: 254 cagagaaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgc 313 ||||||||||||| ||||||||||||||| || | |||| | ||||||||||||||||| Sbjct: 28110 cagagaaggagaatttgtgcctgtacgggcacccgaacgggcggtgggaggtggcgctgc 28051 Query: 314 ccgcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcg 373 | |||||||||||||| | |||||||||||||||||||||||||||||||| || | | Sbjct: 28050 cggcggaggaggtgccgccggagctgccggagccggcgctcgggatcaacttcgccaggg 27991 Query: 374 acggcatgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttg 433 |||| ||| | ||| ||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 27990 acgggatgcaccgccgcgactggctctcgctcgtcgccgtccactccgactcgtggctgc 27931 Query: 434 tctccgtagccttct 448 ||||||| ||||||| Sbjct: 27930 tctccgtcgccttct 27916 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 154 cgcactgtcgaggacatcttcaaggact 181 ||||| |||||||||||||||||||||| Sbjct: 28425 cgcaccgtcgaggacatcttcaaggact 28398
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Minus Query: 259 aaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcg 318 |||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||| Sbjct: 34042342 aaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcg 34042283 Query: 319 gaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgacggc 378 ||||||||||| | |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 34042282 gaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacggg 34042223 Query: 379 atgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttgtctcc 438 ||||| ||| | ||||||||| | |||||||||||||||||||| |||||||| |||||| Sbjct: 34042222 atgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctcc 34042163 Query: 439 gtagccttctactatgccgcgcggctca 466 || ||||||| || ||||||||||||| Sbjct: 34042162 gtcgccttcttcttcgccgcgcggctca 34042135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aggtgcgggcggcggcggcg 142 |||||||||||||||||||| Sbjct: 25851717 aggtgcgggcggcggcggcg 25851698
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Minus Query: 259 aaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcg 318 |||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||| Sbjct: 34132814 aaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcg 34132755 Query: 319 gaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgacggc 378 ||||||||||| | |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 34132754 gaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacggg 34132695 Query: 379 atgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttgtctcc 438 ||||| ||| | ||||||||| | |||||||||||||||||||| |||||||| |||||| Sbjct: 34132694 atgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctcc 34132635 Query: 439 gtagccttctactatgccgcgcggctca 466 || ||||||| || ||||||||||||| Sbjct: 34132634 gtcgccttcttcttcgccgcgcggctca 34132607 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aggtgcgggcggcggcggcg 142 |||||||||||||||||||| Sbjct: 25943026 aggtgcgggcggcggcggcg 25943007
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Minus Query: 259 aaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcg 318 |||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||| Sbjct: 6154 aaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcg 6095 Query: 319 gaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgacggc 378 ||||||||||| | |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 6094 gaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacggg 6035 Query: 379 atgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttgtctcc 438 ||||| ||| | ||||||||| | |||||||||||||||||||| |||||||| |||||| Sbjct: 6034 atgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctcc 5975 Query: 439 gtagccttctactatgccgcgcggctca 466 || ||||||| || ||||||||||||| Sbjct: 5974 gtcgccttcttcttcgccgcgcggctca 5947
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Plus Query: 259 aaggagaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcg 318 |||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||| Sbjct: 15349 aaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcg 15408 Query: 319 gaggaggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgacggc 378 ||||||||||| | |||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 15409 gaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacggg 15468 Query: 379 atgaagcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttgtctcc 438 ||||| ||| | ||||||||| | |||||||||||||||||||| |||||||| |||||| Sbjct: 15469 atgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctcc 15528 Query: 439 gtagccttctactatgccgcgcggctca 466 || ||||||| || ||||||||||||| Sbjct: 15529 gtcgccttcttcttcgccgcgcggctca 15556
>gb|AY111838.1| Zea mays CL29063_1 mRNA sequence Length = 871 Score = 113 bits (57), Expect = 7e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 399 cgcgctcgtcgccgtccactccgattcgtggcttgtctccgtagccttctactatgccgc 458 ||||||||||||||| ||||| || |||||||| |||||||| || |||||||| ||||| Sbjct: 865 cgcgctcgtcgccgtacactctgactcgtggctcgtctccgtcgcattctactacgccgc 806 Query: 459 gcggctcactcgcaacgaccggaagcgtttatttggcatgatgaatgatttgccaac 515 |||||||| |||| || ||||||||||| || ||||||||||||||| ||||||| Sbjct: 805 gcggctcaaccgcagtgatcggaagcgtttgttcggcatgatgaatgatctgccaac 749
>gb|AY109417.1| Zea mays CL1057_-8 mRNA sequence Length = 1878 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 298 tgggaggtggcgctgcccgcggaggaggtgcccaccgagctgccggagccggcgctcggg 357 ||||||||| ||| ||| | ||||||||| || | ||| |||| |||||||||||||| Sbjct: 257 tgggaggtgtcgccgccggtggaggaggttcctccggagttgcccgagccggcgctcggc 316 Query: 358 atcaactttgcgcgcgacggcatgaagcgcagcgactggctcgcgctcgtcgccgtccac 417 |||||||||||||||||||||||| || | ||||||||||| | ||||||||||||| | Sbjct: 317 atcaactttgcgcgcgacggcatgctgcaccgcgactggctcacactcgtcgccgtccgc 376 Query: 418 tccgattcgtggcttgtctccgtagccttctactatg 454 || || |||||||| ||||||| || |||| ||||| Sbjct: 377 tctgactcgtggctcatctccgtcgcattcttctatg 413
>ref|XM_550210.1| Oryza sativa (japonica cultivar-group), mRNA Length = 489 Score = 103 bits (52), Expect = 6e-19 Identities = 175/216 (81%) Strand = Plus / Plus Query: 160 gtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgctctcacc 219 |||||||||||||||| |||| ||||||||||||| ||||||| |||||| |||||| Sbjct: 106 gtcgaggacatcttcagcgacttccgcgcccgccgctccgccatcgtccgcgccctcacc 165 Query: 220 cacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgcctgtac 279 | ||| ||||| ||||| ||||| |||| ||||||| ||| |||||||||||| Sbjct: 166 gaagacctcgagaagttcgccgcgctgtgcaatccagatctggactgcttgtgcctgtat 225 Query: 280 gggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggtgcccaccgagctg 339 ||| || | ||| | ||||||||||||||| ||| ||||| |||||| | |||||| Sbjct: 226 gggaactcggacgggacgtgggaggtggcgccgccgccggagatggtgccgccggagctg 285 Query: 340 ccggagccggcgctcgggatcaactttgcgcgcgac 375 |||||||||||||| || |||||||| |||||||| Sbjct: 286 ccggagccggcgctgggcatcaacttctcgcgcgac 321
>gb|BT017810.1| Zea mays clone EL01N0507A04.c mRNA sequence Length = 1011 Score = 99.6 bits (50), Expect = 1e-17 Identities = 238/298 (79%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 144 ctcagccccccgcactgtcgaggacatcttcaaggactaccgcgcccgccgcaacgccat 203 |||||| ||||| || ||||||||||||| |||||||||| |||||||||| || | | Sbjct: 62 ctcagcgccccggaccgtcgaggacatctacaaggactacgccgcccgccgcgccggcct 121 Query: 204 ccaccgcgctctcacccacgacgtcgaggagttctacgcgca-gtgcgatccagagaagg 262 | |||||| ||||| || ||||| | ||||||| ||| |||||| |||||||||| Sbjct: 122 cgtccgcgccctcacatctgatgtcgacgggttctaca-gcatgtgcgacccagagaagg 180 Query: 263 agaacttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggagg 322 ||||| ||||||||||||| | | |||| | |||||||| ||||||| | ||||| Sbjct: 181 agaacctgtgcctgtacggtctcccgaacggcggctgggaggtatcgctgccggtggagg 240 Query: 323 aggtgcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgacggcatga 382 ||||||| | ||| |||| || || ||||| ||||||||||| || | |||||||||| Sbjct: 241 aggtgccgccggagatgcccgaaccagcgctagggatcaacttcgccagggacggcatga 300 Query: 383 agcgcagcgactggctcgcgctcgtcgccgtccactccgattcgtggcttgtctccgt 440 ||| ||||||||||| ||||||||||||| ||||| || | ||||| |||||||| Sbjct: 301 ggcgtcgcgactggctctcgctcgtcgccgtacactctgacgcttggctcgtctccgt 358
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 267 cttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggt 326 |||||||||||| ||| || | ||| | ||||||||||||||| ||| ||||| ||| Sbjct: 3083161 cttgtgcctgtatgggaactcggacgggacgtgggaggtggcgccgccgccggagatggt 3083102 Query: 327 gcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgac 375 ||| | |||||||||||||||||||| || |||||||| |||||||| Sbjct: 3083101 gccgccggagctgccggagccggcgctgggcatcaacttctcgcgcgac 3083053 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 160 gtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgctctcacc 219 |||||||||||||||| |||| ||||||||||||| ||||||| |||||| |||||| Sbjct: 3083463 gtcgaggacatcttcagcgacttccgcgcccgccgctccgccatcgtccgcgccctcacc 3083404 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 39356613 ggcggcggcggcggcgcagccccc 39356636 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 atgaatgatttgccaaccgt 518 |||||||||||||||||||| Sbjct: 17166275 atgaatgatttgccaaccgt 17166294 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 16127750 ggcggcggcggcggctcagc 16127731 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 4314699 ggtgcgggcggcggcggcgg 4314680
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 267 cttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggt 326 |||||||||||| ||| || | ||| | ||||||||||||||| ||| ||||| ||| Sbjct: 26949 cttgtgcctgtatgggaactcggacgggacgtgggaggtggcgccgccgccggagatggt 26890 Query: 327 gcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgac 375 ||| | |||||||||||||||||||| || |||||||| |||||||| Sbjct: 26889 gccgccggagctgccggagccggcgctgggcatcaacttctcgcgcgac 26841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 160 gtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgctctcacc 219 |||||||||||||||| |||| ||||||||||||| ||||||| |||||| |||||| Sbjct: 27251 gtcgaggacatcttcagcgacttccgcgcccgccgctccgccatcgtccgcgccctcacc 27192
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 267 cttgtgcctgtacgggtacgccaacgaggcgtgggaggtggcgctgcccgcggaggaggt 326 |||||||||||| ||| || | ||| | ||||||||||||||| ||| ||||| ||| Sbjct: 51201 cttgtgcctgtatgggaactcggacgggacgtgggaggtggcgccgccgccggagatggt 51142 Query: 327 gcccaccgagctgccggagccggcgctcgggatcaactttgcgcgcgac 375 ||| | |||||||||||||||||||| || |||||||| |||||||| Sbjct: 51141 gccgccggagctgccggagccggcgctgggcatcaacttctcgcgcgac 51093 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 160 gtcgaggacatcttcaaggactaccgcgcccgccgcaacgccatccaccgcgctctcacc 219 |||||||||||||||| |||| ||||||||||||| ||||||| |||||| |||||| Sbjct: 51503 gtcgaggacatcttcagcgacttccgcgcccgccgctccgccatcgtccgcgccctcacc 51444
>gb|BT017746.1| Zea mays clone EL01N0449H05.c mRNA sequence Length = 1198 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 243 gcagtgcgatccagagaaggagaacttgtgcct 275 |||||||||||||||||| |||||||||||||| Sbjct: 259 gcagtgcgatccagagaaagagaacttgtgcct 291
>gb|AY104993.1| Zea mays PCO092577 mRNA sequence Length = 1146 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 243 gcagtgcgatccagagaaggagaacttgtgcct 275 |||||||||||||||||| |||||||||||||| Sbjct: 235 gcagtgcgatccagagaaagagaacttgtgcct 267
>ref|XM_472642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 233 agttctacgcgcagtgcgatccagagaaggagaacttgtgcct 275 |||||||| ||||||||| || |||||||||||||||||||| Sbjct: 122 agttctacaagcagtgcgaccctgagaaggagaacttgtgcct 164
>dbj|AK098960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072K02, full insert sequence Length = 1234 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 233 agttctacgcgcagtgcgatccagagaaggagaacttgtgcct 275 |||||||| ||||||||| || |||||||||||||||||||| Sbjct: 300 agttctacaagcagtgcgaccctgagaaggagaacttgtgcct 342
>dbj|AK063657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B10, full insert sequence Length = 1249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 233 agttctacgcgcagtgcgatccagagaaggagaacttgtgcct 275 |||||||| ||||||||| || |||||||||||||||||||| Sbjct: 316 agttctacaagcagtgcgaccctgagaaggagaacttgtgcct 358
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 ccagagaaggagaacttgtgcct 275 ||||||||||||||||||||||| Sbjct: 22165988 ccagagaaggagaacttgtgcct 22166010 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccgcctcgccggagatcacg 74 |||||||||||||||||||| Sbjct: 32401950 ccgcctcgccggagatcacg 32401969 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 12385600 gcgggcggcggcggcggctc 12385619
>dbj|AK121400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M22, full insert sequence Length = 1114 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 247 tgcgatccagagaaggagaacttgtgcctgtacgggtac 285 ||||| ||||| ||||||||||||||||| || |||||| Sbjct: 251 tgcgacccagaaaaggagaacttgtgcctttatgggtac 289
>gb|AF202116.1|AF202116 Mus musculus polycomb protein (Pc3) gene, complete cds Length = 2900 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccc 152 ||||||||||||||||||||||| Sbjct: 597 ggcggcggcggcggctcagcccc 619
>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full insert sequence Length = 2105 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 247 tgcgatccagagaaggagaacttgtgcctgtacgggtac 285 ||||| ||||| ||||||||||||||||| || |||||| Sbjct: 1169 tgcgacccagaaaaggagaacttgtgcctttatgggtac 1207
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 ccagagaaggagaacttgtgcct 275 ||||||||||||||||||||||| Sbjct: 90494 ccagagaaggagaacttgtgcct 90516
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 ccagagaaggagaacttgtgcct 275 ||||||||||||||||||||||| Sbjct: 35849 ccagagaaggagaacttgtgcct 35871
>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete sequence Length = 162024 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagcccc 152 ||||||||||||||||||||||| Sbjct: 41014 ggcggcggcggcggctcagcccc 40992
>gb|BC048704.1| Mus musculus glycine/arginine rich protein 1, mRNA (cDNA clone IMAGE:6330338), partial cds Length = 1251 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggctc 146 |||||||||||||||||||||| Sbjct: 834 gtgcgggcggcggcggcggctc 855
>ref|XM_485455.4| PREDICTED: Mus musculus glycine/arginine rich protein 1 (Grrp1), mRNA Length = 1515 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggctc 146 |||||||||||||||||||||| Sbjct: 1127 gtgcgggcggcggcggcggctc 1148
>ref|XM_912757.2| PREDICTED: Mus musculus glycine/arginine rich protein 1 (Grrp1), mRNA Length = 1485 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggctc 146 |||||||||||||||||||||| Sbjct: 1097 gtgcgggcggcggcggcggctc 1118
>dbj|AK012898.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810043G13 product:hypothetical protein, full insert sequence Length = 1215 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggctc 146 |||||||||||||||||||||| Sbjct: 829 gtgcgggcggcggcggcggctc 850
>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence Length = 177950 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 316 gcggaggaggtgcccaccgagctgcc 341 ||||||||||||||| |||||||||| Sbjct: 122881 gcggaggaggtgcccgccgagctgcc 122906
>ref|XM_226563.3| PREDICTED: Rattus norvegicus similar to TRIM9-like protein TNL (LOC307938), mRNA Length = 2874 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggct 145 |||||||||||||||||||||| Sbjct: 1322 ggtgcgggcggcggcggcggct 1301
>emb|AL627314.6| Mouse DNA sequence from clone RP23-354H24 on chromosome 4, complete sequence Length = 196461 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 gtgcgggcggcggcggcggctc 146 |||||||||||||||||||||| Sbjct: 123360 gtgcgggcggcggcggcggctc 123339
>gb|AY308820.1| Canis familiaris sine oculis homeobox 3-like protein gene, partial sequence Length = 430 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 312 ggtgcgggcggcggcggcggc 292
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 1463881 ggtgcgggcggcggcggcggc 1463861
>ref|NM_023990.1| Rattus norvegicus sine oculis homeobox homolog 3 (Drosophila) (Six3), mRNA Length = 1598 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 475 ggtgcgggcggcggcggcggc 495
>ref|NM_053869.1| Rattus norvegicus paired-like homeobox 2a (Phox2a), mRNA Length = 1608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 792 ggtgcgggcggcggcggcggc 772
>ref|NM_183357.1| Homo sapiens adenylate cyclase 5 (ADCY5), mRNA Length = 3842 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 396 tgcgggcggcggcggcggctc 416
>gb|BT018462.1| Zea mays clone EL01N0414F09.d mRNA sequence Length = 1086 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 233 agttctacgcgcagtgcgatccagagaaggagaactt 269 ||||||||| | |||||| ||||||||||||||||| Sbjct: 221 agttctacgtgatgtgcgacccagagaaggagaactt 257
>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 153441 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 30913 ggcggcggcggcggctcagaccccc 30937
>ref|XM_362103.1| Magnaporthe grisea 70-15 hypothetical protein (MG04548.4) partial cds Length = 1674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 393 ggtgcgggcggcggcggcggc 413
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 acgaggcgtgggaggtggcgc 310 ||||||||||||||||||||| Sbjct: 1504252 acgaggcgtgggaggtggcgc 1504272
>ref|XM_592660.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2) (LOC540250), mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 540 ggtgcgggcggcggcggcggc 560
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 14766 ggtgcgggcggcggcggcggc 14786
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 13884 tgcgggcggcggcggcggctc 13904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 8681 tgcgggcggcggcggcggctc 8701
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 147148 tgcgggcggcggcggcggctc 147168
>ref|NM_138426.1| Homo sapiens glucocorticoid induced transcript 1 (GLCCI1), mRNA Length = 3037 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 683 ggtgcgggcggcggcggcggc 703
>gb|AC119219.6| Mus musculus chromosome 12, clone RP24-201C18, complete sequence Length = 187098 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 122702 ggcggcggcggcggctcagaccccc 122678
>gb|AC006042.2| Homo sapiens BAC clone RP11-505D17 from 7, complete sequence Length = 178361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 27872 ggtgcgggcggcggcggcggc 27892
>ref|XM_845833.1| PREDICTED: Canis familiaris similar to LIM domain-binding protein 1 (Nuclear LIM interactor), transcript variant 2 (LOC477804), mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 238 gcgggcggcggcggcggctca 258
>ref|XM_857571.1| PREDICTED: Canis familiaris similar to LIM domain-binding protein 1 (Nuclear LIM interactor), transcript variant 5 (LOC477804), mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 238 gcgggcggcggcggcggctca 258
>ref|XM_857546.1| PREDICTED: Canis familiaris similar to LIM domain-binding protein 1 (Nuclear LIM interactor), transcript variant 4 (LOC477804), mRNA Length = 2004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 238 gcgggcggcggcggcggctca 258
>ref|XM_534997.2| PREDICTED: Canis familiaris similar to LIM domain-binding protein 1 (Nuclear LIM interactor), transcript variant 1 (LOC477804), mRNA Length = 1929 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 238 gcgggcggcggcggcggctca 258
>ref|XM_538477.2| PREDICTED: Canis familiaris similar to sine oculis homeobox homolog 3 (LOC481356), mRNA Length = 1775 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 141 ggtgcgggcggcggcggcggc 161
>ref|XM_540474.2| PREDICTED: Canis familiaris similar to chromosome 17 open reading frame 27, transcript variant 1 (LOC483355), mRNA Length = 10707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gaggtggcgctgcccgcggaggagg 325 |||| |||||||||||||||||||| Sbjct: 8524 gaggcggcgctgcccgcggaggagg 8500
>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence Length = 215972 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 149056 ggcggcggcggcggctcagaccccc 149080
>gb|AC125279.1| Mus musculus BAC clone RP23-433F5 from 8, complete sequence Length = 201197 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 acttgcctgcctctgtctccc 21 ||||||||||||||||||||| Sbjct: 166727 acttgcctgcctctgtctccc 166707
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gtgcgggcggcggcggcggct 145 ||||||||||||||||||||| Sbjct: 71940 gtgcgggcggcggcggcggct 71920
>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the gene for Hermansky-Pudlak syndrome-6 protein (HPS6), two pseudogenes for transcription elongation factor B (SIII), polypeptide 1, the LDB1 gene for LIM domain binding 1, a novel gene (KIAA0595), the NOLC1 gene for nucleolar and coiled-body phosphoprotein 1 and five CpG islands, complete sequence Length = 158434 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 61958 gcgggcggcggcggcggctca 61938
>gb|BC050291.1| Homo sapiens glucocorticoid induced transcript 1, mRNA (cDNA clone MGC:43752 IMAGE:5272003), complete cds Length = 3037 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 683 ggtgcgggcggcggcggcggc 703
>emb|CR932805.1| Mus musculus chromosome 2, clone ResGen-283N17 strain 129/Sv, complete sequence Length = 151864 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tggcatgatgaatgatttgcc 512 ||||||||||||||||||||| Sbjct: 51861 tggcatgatgaatgatttgcc 51881
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159902 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 94857 tgcgggcggcggcggcggctc 94837
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 2709586 ggtgcgggcggcggcggcggc 2709606
>dbj|AK131853.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810063E24 product:unclassifiable, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tggcatgatgaatgatttgcc 512 ||||||||||||||||||||| Sbjct: 995 tggcatgatgaatgatttgcc 975
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 3468016 ggtgcgggcggcggcggcggc 3468036
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 602839 ggtgcgggcggcggcggcggc 602819
>dbj|AK088219.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007I21 product:B-cell lymphoma/leukaemia 11B, full insert sequence Length = 4636 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 136 ggcggcggcggcggctcagaccccc 160
>tpg|BK000371.1| TPA: TPA_exp: Homo sapiens adenylyl cyclase type V (ADCY5) mRNA, partial cds Length = 1134 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggctc 146 ||||||||||||||||||||| Sbjct: 396 tgcgggcggcggcggcggctc 416
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggct 145 ||||||||||||||||||||| Sbjct: 24750548 gtgcgggcggcggcggcggct 24750568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 20756895 ggcggcggcggcggctcagc 20756876 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 1120001 gcgggcggcggcggcggctc 1119982
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gggcggcggcggcggctcagc 149 ||||||||||||||||||||| Sbjct: 26354254 gggcggcggcggcggctcagc 26354274
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 12931002 ggtgcgggcggcggcggcggc 12930982 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgcgggcggcggcggcggct 145 |||||||||||||||||||| Sbjct: 10263678 tgcgggcggcggcggcggct 10263659
>gb|AC007297.23| Homo sapiens 12 BAC RP11-690J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187737 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 agtcatctcaggcatgagaca 545 ||||||||||||||||||||| Sbjct: 87137 agtcatctcaggcatgagaca 87157
>ref|XM_234514.3| PREDICTED: Rattus norvegicus B-cell leukemia/lymphoma 11B (predicted) (Bcl11b_predicted), mRNA Length = 5714 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 148 ggcggcggcggcggctcagaccccc 172
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagcc 150 ||||||||||||||||||||| Sbjct: 4288 ggcggcggcggcggctcagcc 4268
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ctcctaccgccgttcaggtgcgggcggcg 136 ||||||||||||| |||||||| |||||| Sbjct: 884445 ctcctaccgccgtacaggtgcgcgcggcg 884473
>dbj|AB186362.1| Rattus norvegicus Arix gene for transcription factor, complete cds Length = 8363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 6849 ggtgcgggcggcggcggcggc 6829
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 150484 ggtgcgggcggcggcggcggc 150464
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 40645 ggtgcgggcggcggcggcggc 40625
>emb|AL928806.14| Mouse DNA sequence from clone RP23-34E4 on chromosome 2, complete sequence Length = 179547 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tggcatgatgaatgatttgcc 512 ||||||||||||||||||||| Sbjct: 133804 tggcatgatgaatgatttgcc 133824
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gggcggcggcggcggctcagc 149 ||||||||||||||||||||| Sbjct: 3806 gggcggcggcggcggctcagc 3826
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gggcggcggcggcggctcagc 149 ||||||||||||||||||||| Sbjct: 83835 gggcggcggcggcggctcagc 83855
>emb|AJ243097.1|HSA243097 Homo sapiens partial NLI gene for Nuclear LIM interactor, exon 1 Length = 1097 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctca 147 ||||||||||||||||||||| Sbjct: 691 gcgggcggcggcggcggctca 711
>ref|NM_210197.1| Eremothecium gossypii AEL018Cp (AEL018C), mRNA Length = 1152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 258 ggtgcgggcggcggcggcggc 278
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 acttgcctgcctctgtctccc 21 ||||||||||||||||||||| Sbjct: 16273 acttgcctgcctctgtctccc 16253
>gb|BC039973.1| Mus musculus, clone IMAGE:4502060, mRNA Length = 1387 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tggcatgatgaatgatttgcc 512 ||||||||||||||||||||| Sbjct: 1258 tggcatgatgaatgatttgcc 1238
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 agcgcagcgactggctcgcgc 403 ||||||||||||||||||||| Sbjct: 739930 agcgcagcgactggctcgcgc 739950
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggct 145 ||||||||||||||||||||| Sbjct: 25062218 gtgcgggcggcggcggcggct 25062238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 21067130 ggcggcggcggcggctcagc 21067111 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 1117722 gcgggcggcggcggcggctc 1117703
>emb|AL139281.7| Human DNA sequence from clone RP11-215C7 on chromosome 10 Contains the gene for pilin-like transcription factor (PILB) (CGI-131), a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta polypeptide (YWHAZ) pseudogene, the gene for a novel protein similar to bHLH protein Ptf1-p48 (PTF1A) (possible ortholog of rodent pancreas specific transcription factor 1a (Ptf1a)), a novel gene, a novel pseudogene and five CpG islands, complete sequence Length = 176783 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tggcatgatgaatgatttgcc 512 ||||||||||||||||||||| Sbjct: 116861 tggcatgatgaatgatttgcc 116881
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 25788 ggtgcgggcggcggcggcggc 25768
>gb|U25967.1|RNU25967 Rattus norvegicus Arix1 homeodomain protein mRNA, complete cds Length = 1608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 792 ggtgcgggcggcggcggcggc 772
>gb|U20660.1|DVU20660 Drosophila virilis suppressor of sable homolog gene, complete cds Length = 8527 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 2910 ggtgcgggcggcggcggcggc 2930
>emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chromosome 15, complete sequence Length = 216733 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 42891 ggcggcggcggcggctcagaccccc 42867
>dbj|AB030833.1| Rattus norvegicus mRNA for homeobox protein Six3, complete cds Length = 1598 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcggc 144 ||||||||||||||||||||| Sbjct: 475 ggtgcgggcggcggcggcggc 495
>dbj|AB043583.1| Mus musculus mRNA for zinc finger protein mRit1 gamma, complete cds Length = 2522 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 191 ggcggcggcggcggctcagaccccc 215
>dbj|AB043553.1| Mus musculus mRNA for zinc finger protein mRit1 beta, complete cds Length = 2888 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 191 ggcggcggcggcggctcagaccccc 215
>dbj|AB043551.1| Mus musculus mRNA for zinc finger protein mRit1 alpha, complete cds Length = 3104 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagcccccc 154 ||||||||||||||||||| ||||| Sbjct: 191 ggcggcggcggcggctcagaccccc 215
>gb|AY423734.1| Homo sapiens migration-inducing gene 18 protein mRNA, complete cds Length = 3633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 71 ggcggcggcggcggctcagc 52
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 20962 ttgcctgcctctgtctcccg 20981
>ref|XM_550409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 136 ggtgcgggcggcggcggcgg 155
>ref|NM_189568.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1087 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 73 ggtgcgggcggcggcggcgg 92
>ref|XM_475938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 81 ggtgcgggcggcggcggcgg 62
>ref|XM_474038.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccgcctcgccggagatcacg 74 |||||||||||||||||||| Sbjct: 1139 ccgcctcgccggagatcacg 1158
>ref|XM_469168.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1099 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aggtgcgggcggcggcggcg 142 |||||||||||||||||||| Sbjct: 64 aggtgcgggcggcggcggcg 83
>ref|XM_469167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 854 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aggtgcgggcggcggcggcg 142 |||||||||||||||||||| Sbjct: 50 aggtgcgggcggcggcggcg 69
>ref|XM_468079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 663 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 43 gcgggcggcggcggcggctc 62
>gb|DQ213148.1| Taeniopygia guttata clone 0058P0037A07 nudix (nucleoside diphosphate linked moiety)-like mRNA, complete sequence Length = 957 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 67 gcgggcggcggcggcggctc 86
>ref|NM_196909.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0071K18.2), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 69 ggtgcgggcggcggcggcgg 88
>ref|NM_190339.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 45 ggcggcggcggcggcgcagccccc 68
>ref|XM_478646.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1569 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 156 ggtgcgggcggcggcggcgg 137
>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence Length = 159578 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tgcctgcctctgtctcccgc 23 |||||||||||||||||||| Sbjct: 121898 tgcctgcctctgtctcccgc 121917
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 254 cagagaaggagaacttgtgcctgtacgggtac 285 |||| ||||||||||||||||| || |||||| Sbjct: 70952 cagaaaaggagaacttgtgcctttatgggtac 70983
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 agaaggagaacttgtgcctgtacg 280 ||||||||||||||| |||||||| Sbjct: 746585 agaaggagaacttgtccctgtacg 746562
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 75979 gcgggcggcggcggcggctc 75998
>ref|XM_361677.1| Magnaporthe grisea 70-15 hypothetical protein (MG04151.4) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggcgtgggaggtggcgctg 312 |||||||||||||||||||| Sbjct: 221 aggcgtgggaggtggcgctg 240
>ref|XM_870302.1| PREDICTED: Bos taurus similar to interleukin 21 receptor precursor (LOC617967), mRNA Length = 2670 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 ggtgcccaccgagctgccggagcc 347 ||||||||| |||||||||||||| Sbjct: 1418 ggtgcccacggagctgccggagcc 1441
>ref|XM_416305.1| PREDICTED: Gallus gallus similar to brain synembryn (LOC418069), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ggcggctcagccccccgcac 158 |||||||||||||||||||| Sbjct: 187 ggcggctcagccccccgcac 168
>gb|AY658731.1| Synthetic construct Peudomonas aeruginosa clone FLH034692.01F PA0184 gene, partial cds Length = 840 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tcacccacgacgtcgaggag 234 |||||||||||||||||||| Sbjct: 602 tcacccacgacgtcgaggag 621
>gb|BC015806.1| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone MGC:9446 IMAGE:3906722), complete cds Length = 2943 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 75 ggcggcggcggcggctcagc 56
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 29297 ggcggcggcggcggctcagc 29316
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tgcctgcctctgtctcccgc 23 |||||||||||||||||||| Sbjct: 29278 tgcctgcctctgtctcccgc 29297
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 87057 ggtgcgggcggcggcggcgg 87076
>gb|AC131800.4| Mus musculus BAC clone RP24-535O17 from chromosome 17, complete sequence Length = 162701 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 78250 gcgggcggcggcggcggcccagcc 78227
>ref|NM_024869.1| Homo sapiens glycine/arginine rich protein 1 (GRRP1), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 846 gcgggcggcggcggcggctc 865
>ref|XR_003668.1| PREDICTED: Mus musculus similar to Protein kinase C and casein kinase substrate in neurons protein 1 (LOC672014), mRNA Length = 893 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 101 gcgggcggcggcggcggcccagcc 78
>ref|XM_544986.2| PREDICTED: Canis familiaris similar to Atonal protein homolog 1 (Helix-loop-helix protein hATH-1) (LOC487864), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgcgggcggcggcggcggct 145 |||||||||||||||||||| Sbjct: 693 tgcgggcggcggcggcggct 674
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acttgcctgcctctgtctcc 20 |||||||||||||||||||| Sbjct: 253458 acttgcctgcctctgtctcc 253477
>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete sequence Length = 44761 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aggtgcgggcggcggcggcg 142 |||||||||||||||||||| Sbjct: 22660 aggtgcgggcggcggcggcg 22641
>ref|XM_570229.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND02740) partial mRNA Length = 4833 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 agaaggagaacttgtgcctgtacg 280 ||||||||||||||| |||||||| Sbjct: 1800 agaaggagaacttgtccctgtacg 1777
>gb|AY458599.1| Bos taurus C/EBP mRNA, complete cds Length = 1231 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 947 gtgcgggcggcggcggcggc 966
>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete sequence Length = 162663 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 74812 ttgcctgcctctgtctcccg 74831
>gb|AC145510.2| Gasterosteus aculeatus clone CH213-60G7, complete sequence Length = 183847 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cggcggcggctcagcccccc 154 |||||||||||||||||||| Sbjct: 107825 cggcggcggctcagcccccc 107844
>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete sequence Length = 156807 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 69909 ttgcctgcctctgtctcccg 69890
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence Length = 183554 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 181041 ttgcctgcctctgtctcccg 181060
>gb|AC098885.3| Mus musculus BAC clone RP23-122L17 from 5, complete sequence Length = 211112 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 130634 ttgcctgcctctgtctcccg 130615
>emb|CR709606.2|CNS0GAHE Tetraodon nigroviridis full-length cDNA Length = 1621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 208 gcgggcggcggcggcggctc 227
>emb|CR707886.2|CNS0G95M Tetraodon nigroviridis full-length cDNA Length = 1624 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 208 gcgggcggcggcggcggctc 227
>emb|CR701735.2|CNS0G4ER Tetraodon nigroviridis full-length cDNA Length = 1495 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 734 gcgggcggcggcggcggctc 753
>gb|BC014698.1| Mus musculus protein kinase C and casein kinase substrate in neurons 1, mRNA (cDNA clone MGC:25285 IMAGE:4527708), complete cds Length = 1648 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 72 gcgggcggcggcggcggcccagcc 49
>gb|BC050663.2| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone IMAGE:4421051), partial cds Length = 1370 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 83 ggcggcggcggcggctcagc 64
>gb|BC025658.1| Homo sapiens glycine/arginine rich protein 1, mRNA (cDNA clone MGC:34152 IMAGE:5198480), complete cds Length = 1554 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 843 gcgggcggcggcggcggctc 862
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 18088 ggcggcggcggcggctcagc 18107
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cccccgcctcgccggagatcacga 75 |||||||||||||||| ||||||| Sbjct: 1735818 cccccgcctcgccggaaatcacga 1735841
>emb|AL391650.18| Human DNA sequence from clone RP11-96L14 on chromosome 1 Contains the EXTL1 gene for exostoses (multiple)-like 1, the SLC30A2 gene for solute carrier family 30 (zinc transporter) member 2, the RNF28 gene for ring finger protein 28, a novel gene, a novel gene (FLJ14050), the gene for zinc finger protein (ZT86), a novel gene, the 5' end of the gene for connector enhancer of KSR-like (Drosophila kinase suppressor of ras) (CNK1) and four CpG islands, complete sequence Length = 176006 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 147462 gcgggcggcggcggcggctc 147481
>emb|AL355477.14| Human DNA sequence from clone RP11-113D13 on chromosome 1 Contains the 5' end of the MACF1 gene for microtubule-actin crosslinking factor 1 and two CpG islands, complete sequence Length = 63187 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 35724 gcgggcggcggcggcggctc 35705
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 15807 gcgggcggcggcggcggctc 15788
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 63956 ggcggcggcggcggctcagc 63937
>emb|AL096766.12|HSDA59H18 Human DNA sequence from clone RP6-59H18 on chromosome 22, complete sequence Length = 70890 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 ggcatgagacaatcgaaggagagg 558 |||||||||||||| ||||||||| Sbjct: 60445 ggcatgagacaatctaaggagagg 60468
>emb|AL035415.22|HS705F19 Human DNA sequence from clone RP4-705F19 on chromosome 1p32.2-34.2 Contains the 5' end of the SSBP3 gene for single stranded DNA binding protein 3, two novel genes and a CpG island, complete sequence Length = 136502 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 61754 gtgcgggcggcggcggcggc 61773
>emb|AL031721.1|HS399E4 Human DNA sequence from clone LA16c-399E4 on chromosome 16 Contains part of a gene similar to D.melanogaster unkempt protein, ESTs, GSSs and CpG Islands, complete sequence Length = 36655 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gagctgccggagccggcgct 353 |||||||||||||||||||| Sbjct: 15983 gagctgccggagccggcgct 16002
>emb|Z48540.2|PAATSAGN Pseudomonas aeruginosa atsR, atsB, atsC & atsA genes Length = 6315 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tcacccacgacgtcgaggag 234 |||||||||||||||||||| Sbjct: 3762 tcacccacgacgtcgaggag 3781
>emb|X85124.1|MH74GENE M.musculus pacsin gene Length = 4091 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 33 gcgggcggcggcggcggcccagcc 10
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 28655 ggtgcgggcggcggcggcgg 28674
>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene cluster, partial sequence Length = 17455 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cgcgctcgtcgccgtccact 418 |||||||||||||||||||| Sbjct: 12383 cgcgctcgtcgccgtccact 12402
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24, complete sequence Length = 132465 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 59627 gcgggcggcggcggcggctc 59646
>emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chromosome 13 Contains the 3' end of the Slc17a1 gene for solute carrier family 17 vesicular glutamate transporter) member 1, the gene for a novel solute carrier family 17 (Slc17a) member, a U1 small nuclear ribonucleoprotein 1C (Snrp1c) pseudogene, a H2B histone family (H2b) pseudogene, the gene for a novel H2A histone family (H2a) member, a novel gene, the gene for the ortholog of human secretagogin, EF-hand calcium binding protein SCGN and the 3' end of a novel gene, complete sequence Length = 183698 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cttgcctgcctctgtctccc 21 |||||||||||||||||||| Sbjct: 11109 cttgcctgcctctgtctccc 11090
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccgcctcgccggagatcacg 74 |||||||||||||||||||| Sbjct: 18751 ccgcctcgccggagatcacg 18770
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 115368 ggtgcgggcggcggcggcgg 115387
>emb|AJ293306.1|BCE293306 Burkholderia cepacia alkB gene, minD gene (partial), minC gene and serS gene Length = 6237 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 accgcgcccgccgcaacgcc 201 |||||||||||||||||||| Sbjct: 5394 accgcgcccgccgcaacgcc 5413
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 211589 ttgcctgcctctgtctcccg 211570
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gagctgccggagccggcgct 353 |||||||||||||||||||| Sbjct: 55191 gagctgccggagccggcgct 55210
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 158319 ggcggcggcggcggcgcagccccc 158342
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 3786491 ggtgcgggcggcggcggcgg 3786510 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 1750224 ggtgcgggcggcggcggcgg 1750243
>gb|AY957499.1| Bos taurus glutamate-cysteine ligase catalytic subunit (GCLC), MHC class II antigen (DSB), MHC class II antigen (DYA), MHC class II antigen (DYB), MHC class II antigen (DOB), transporter 2 ATP-binding cassette sub-family B (TAP2), proteasome subunit beta type 8 (PSMB8), transporter 1 ATP-binding cassette sub-family B (TAP1), proteosome subunit beta type 9 (PSMB9), histone H2B-like (H2B), MHC class II antigen (DMB), MHC class II antigen (DMA), bromodomain containing 2 (BRD2), MHC class II antigen (DOA), collagen type XI alpha 2 (COL11A2), retinoid X receptor beta (RXRB), solute carrier family 39 zinc transporter member 7 (HKE4), and hydroxysteroid (17-beta) dehydrogenase 8 (HKE6) genes, complete cds; and ring finger protein 1 (RING1) gene, partial cds Length = 447010 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggcggcggcggctcagcccc 152 |||||||||||||||||||| Sbjct: 35940 ggcggcggcggctcagcccc 35921
>gb|AE005862.1| Caulobacter crescentus CB15 section 188 of 359 of the complete genome Length = 10016 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccgcgcccgccgcaacgcca 202 |||||||||||||||||||| Sbjct: 4900 ccgcgcccgccgcaacgcca 4881
>emb|CR612361.1| full-length cDNA clone CS0DI060YG16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1486 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 849 gcgggcggcggcggcggctc 868
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gggcggcggcggcggctcag 148 |||||||||||||||||||| Sbjct: 31240 gggcggcggcggcggctcag 31221
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 40976 gtgcgggcggcggcggcggc 40957
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gggcggcggcggcggctcag 148 |||||||||||||||||||| Sbjct: 91222 gggcggcggcggcggctcag 91203
>emb|CR594191.1| full-length cDNA clone CS0DI040YM04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1415 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 785 gcgggcggcggcggcggctc 804
>dbj|AK024112.1| Homo sapiens cDNA FLJ14050 fis, clone HEMBA1006796 Length = 1512 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 846 gcgggcggcggcggcggctc 865
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 461372 ggtgcgggcggcggcggcgg 461391
>gb|AC099325.4| Oryza sativa chromosome 10 BAC OSJNBb0048O22 genomic sequence, complete sequence Length = 134825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cccccgcactgtcgaggaca 169 |||||||||||||||||||| Sbjct: 45428 cccccgcactgtcgaggaca 45409
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 44719 gcgggcggcggcggcggctc 44738
>gb|AC099343.3| Homo sapiens BAC clone RP11-326I11 from 4, complete sequence Length = 196216 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 87805 ggcggcggcggcggcccagccccc 87828
>gb|AC104630.1| Drosophila melanogaster, chromosome 2L, region 22B-22C, BAC clone BACR19B15, complete sequence Length = 180088 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 156214 gcgggcggcggcggcggctc 156233
>dbj|AK158686.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230054C04 product:protein kinase C and casein kinase substrate in neurons 1, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 127 gcgggcggcggcggcggcccagcc 104
>ref|NM_001009955.1| Homo sapiens single stranded DNA binding protein 3 (SSBP3), transcript variant 3, mRNA Length = 1993 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 83 gtgcgggcggcggcggcggc 102
>ref|NM_018070.3| Homo sapiens single stranded DNA binding protein 3 (SSBP3), transcript variant 2, mRNA Length = 2014 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 19 gtgcgggcggcggcggcggc 38
>ref|NM_145716.2| Homo sapiens single stranded DNA binding protein 3 (SSBP3), transcript variant 1, mRNA Length = 2074 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 19 gtgcgggcggcggcggcggc 38
>ref|NM_031892.1| Homo sapiens SH3-domain kinase binding protein 1 (SH3KBP1), transcript variant 1, mRNA Length = 3348 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 148 ggcggcggcggcggctcagc 129
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 30332 ttgcctgcctctgtctcccg 30313
>gb|DQ068270.1| Bos taurus C/EBP alpha protein gene, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 947 gtgcgggcggcggcggcggc 966
>gb|AC092188.1|AC092188 Drosophila melanogaster, chromosome 2L, region 22B-22C, BAC clone BACR28O09, complete sequence Length = 177326 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 46267 gcgggcggcggcggcggctc 46286
>ref|NM_176784.2| Bos taurus CCAAT/enhancer binding protein, alpha (CEBPA), mRNA Length = 1231 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 947 gtgcgggcggcggcggcggc 966
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 26328144 ggcggcggcggcggctcagc 26328125
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 16631587 ggtgcgggcggcggcggcgg 16631568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 7219361 gcgggcggcggcggcggctc 7219380 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccccgcactgtcgaggaca 169 |||||||||||||||||||| Sbjct: 7121380 cccccgcactgtcgaggaca 7121399
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gggcggcggcggcggctcag 148 |||||||||||||||||||| Sbjct: 6863718 gggcggcggcggcggctcag 6863737
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ggaggtggcgctgcccgcggagga 323 |||||||||||||||||| ||||| Sbjct: 21413987 ggaggtggcgctgcccgccgagga 21413964 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gggaggtggcgctgcccgcggagg 322 |||||||||||||||| ||||||| Sbjct: 7952127 gggaggtggcgctgccggcggagg 7952104
>gb|AC154307.2| Mus musculus BAC clone RP23-377C12 from chromosome 9, complete sequence Length = 186985 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acttgcctgcctctgtctcc 20 |||||||||||||||||||| Sbjct: 107236 acttgcctgcctctgtctcc 107255
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 202616 ttgcctgcctctgtctcccg 202635
>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence Length = 124060 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 16836 gcgggcggcggcggcggctc 16855
>gb|AC138696.4| Homo sapiens chromosome 8, clone RP13-582O9, complete sequence Length = 165019 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 128698 gcgggcggcggcggcggctc 128717
>gb|AE004456.1| Pseudomonas aeruginosa PAO1, section 17 of 529 of the complete genome Length = 12534 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tcacccacgacgtcgaggag 234 |||||||||||||||||||| Sbjct: 5332 tcacccacgacgtcgaggag 5313
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 137859 ggcggcggcggcggcgcagccccc 137882
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 2780300 ggtgcgggcggcggcggcgg 2780319
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 107187 ggtgcgggcggcggcggcgg 107168
>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111E11 Length = 152835 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 atgaatgatttgccaaccgt 518 |||||||||||||||||||| Sbjct: 79231 atgaatgatttgccaaccgt 79250
>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0676G08 Length = 153154 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 4157 ggcggcggcggcggctcagc 4138
>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0093M23 Length = 134578 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 83913 ggcggcggcggcggctcagc 83894
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 94469 ggtgcgggcggcggcggcgg 94450
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ggaggtggcgctgcccgcggagga 323 |||||||||||||||||| ||||| Sbjct: 48487 ggaggtggcgctgcccgccgagga 48464
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gggaggtggcgctgcccgcggagg 322 |||||||||||||||| ||||||| Sbjct: 59645 gggaggtggcgctgccggcggagg 59622
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gggcggcggcggcggctcag 148 |||||||||||||||||||| Sbjct: 91613 gggcggcggcggcggctcag 91632
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgcgggcggcggcggcggct 145 |||||||||||||||||||| Sbjct: 136044 tgcgggcggcggcggcggct 136025
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgcgggcggcggcggcggct 145 |||||||||||||||||||| Sbjct: 29488 tgcgggcggcggcggcggct 29469
>dbj|AK109424.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A09, full insert sequence Length = 1112 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 114 ggtgcgggcggcggcggcgg 133
>gb|AF230904.1|AF230904 Homo sapiens c-Cbl-interacting protein (CIN85) mRNA, complete cds Length = 3348 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 148 ggcggcggcggcggctcagc 129
>dbj|AK109716.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H10, full insert sequence Length = 2443 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccgcctcgccggagatcacg 74 |||||||||||||||||||| Sbjct: 1454 ccgcctcgccggagatcacg 1473
>dbj|AK106185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D07, full insert sequence Length = 1087 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 73 ggtgcgggcggcggcggcgg 92
>dbj|AK106173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C03, full insert sequence Length = 1122 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 133 ggtgcgggcggcggcggcgg 152
>dbj|AK069381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M02, full insert sequence Length = 1092 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 94 ggtgcgggcggcggcggcgg 113
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 172 ggcggcggcggcggctcagc 153
>dbj|AK065762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042H11, full insert sequence Length = 1876 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggcggcggcggcggctcagccccc 153 ||||||||||||||| |||||||| Sbjct: 248 ggcggcggcggcggcgcagccccc 271
>dbj|AK064201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D11, full insert sequence Length = 1479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 152 ggtgcgggcggcggcggcgg 133
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 3680 ggtgcgggcggcggcggcgg 3661
>gb|AY108533.1| Zea mays PCO147142 mRNA sequence Length = 1128 Score = 40.1 bits (20), Expect = 7.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 214 ctcacccacgacgtcgaggagttctacgcgcagtgcgatccagagaaggagaacttgtgc 273 |||||| |||| || ||| |||||||| || |||||| || || ||||| ||||||||| Sbjct: 189 ctcaccaacgatgtggagaagttctaccagctgtgcgaccccgaaaaggaaaacttgtgc 248 Query: 274 ctgtacgggtacgccaacga 293 || || || ||| ||||||| Sbjct: 249 ctttatggctaccccaacga 268
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 2803225 ggtgcgggcggcggcggcgg 2803244
>gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 of 83 of the complete sequence Length = 343161 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 57818 gcgggcggcggcggcggctc 57799
>emb|CT573099.7| Mouse DNA sequence from clone CH29-15F19 on chromosome 17, complete sequence Length = 82473 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 275 gcgggcggcggcggcggcccagcc 252
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 ggaggaggtgcccaccgagctgcc 341 ||||||||||||| |||||||||| Sbjct: 1806963 ggaggaggtgcccgccgagctgcc 1806940
>emb|CT027568.16| Mouse DNA sequence from clone CH29-70E9 on chromosome 17, complete sequence Length = 90722 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 88997 gcgggcggcggcggcggcccagcc 88974
>gb|AC174773.1| Gasterosteus aculeatus clone VMRC28-91K14, complete sequence Length = 153630 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cggcggcggctcagcccccc 154 |||||||||||||||||||| Sbjct: 119252 cggcggcggctcagcccccc 119233
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 16639828 ggtgcgggcggcggcggcgg 16639809 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 7222657 gcgggcggcggcggcggctc 7222676 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccccgcactgtcgaggaca 169 |||||||||||||||||||| Sbjct: 7124666 cccccgcactgtcgaggaca 7124685
>gb|AY656839.1| Leishmania donovani chagasi genomic sequence Length = 31876 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 15883 gcgggcggcggcggcggctc 15864
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 26256312 ggcggcggcggcggctcagc 26256293
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 92128 ggcggcggcggcggctcagc 92109
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcggcggcggcggctcagc 149 |||||||||||||||||||| Sbjct: 42416 ggcggcggcggcggctcagc 42397
>gb|AC004445.1|AC004445 Drosophila melanogaster DNA sequence (P1 DS00445 (D93)), complete sequence Length = 61852 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctc 146 |||||||||||||||||||| Sbjct: 14112 gcgggcggcggcggcggctc 14093
>emb|AM179854.1| Sorghum bicolor partial mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 1369 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgcgggcggcggcggcggct 145 |||||||||||||||||||| Sbjct: 156 tgcgggcggcggcggcggct 175
>ref|NM_011861.1| Mus musculus protein kinase C and casein kinase substrate in neurons 1 (Pacsin1), mRNA Length = 4091 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gcgggcggcggcggcggctcagcc 150 |||||||||||||||||| ||||| Sbjct: 33 gcgggcggcggcggcggcccagcc 10
>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acttgcctgcctctgtctcc 20 |||||||||||||||||||| Sbjct: 127410 acttgcctgcctctgtctcc 127391
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 109654 ttgcctgcctctgtctcccg 109635
>emb|BX000691.12| Mouse DNA sequence from clone RP23-107A12 on chromosome X, complete sequence Length = 117743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 catctcctctcagcctcccc 55 |||||||||||||||||||| Sbjct: 14088 catctcctctcagcctcccc 14069
>emb|AL845495.9| Mouse DNA sequence from clone RP23-234E8 on chromosome 2, complete sequence Length = 201479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tgcctgcctctgtctcccgc 23 |||||||||||||||||||| Sbjct: 108074 tgcctgcctctgtctcccgc 108055
>emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on chromosome 11, complete sequence Length = 233204 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgcctgcctctgtctcccg 22 |||||||||||||||||||| Sbjct: 161448 ttgcctgcctctgtctcccg 161467
>gb|AY843142.1| Fungal sp. TRN444 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 512 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cccgtccccgcgacggacgc 107 |||||||||||||||||||| Sbjct: 376 cccgtccccgcgacggacgc 395
>dbj|D85415.2| Pseudomonas putida UCC22 plasmid pTDN1 genes for conversion of aniline to catechol, aniline degradation lower-pathway gene cluster, regulatory protein and transposase, partial and complete cds Length = 25404 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggtgcgggcggcggcggcgg 143 |||||||||||||||||||| Sbjct: 19797 ggtgcgggcggcggcggcgg 19778
>dbj|D82984.1| Bos taurus DNA for C/EBP alpha protein, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gtgcgggcggcggcggcggc 144 |||||||||||||||||||| Sbjct: 947 gtgcgggcggcggcggcggc 966
>emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chromosome 2, complete sequence Length = 96128 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acttgcctgcctctgtctcc 20 |||||||||||||||||||| Sbjct: 32783 acttgcctgcctctgtctcc 32802 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,363,309 Number of Sequences: 3902068 Number of extensions: 5363309 Number of successful extensions: 335023 Number of sequences better than 10.0: 249 Number of HSP's better than 10.0 without gapping: 265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 316174 Number of HSP's gapped (non-prelim): 18840 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
