Clone Name | bart40b03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 105 bits (53), Expect = 1e-19 Identities = 105/121 (86%), Gaps = 6/121 (4%) Strand = Plus / Minus Query: 125 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 184 |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 108981 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 108925 Query: 185 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 241 |||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| Sbjct: 108924 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 108865 Query: 242 c 242 | Sbjct: 108864 c 108864 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 295 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccagcta 346 |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105899 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 105848 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 402 cagcagcagcagtgcggcagcaagggcaccggtgtcttcatcccccggtccacgcccggc 461 |||||||||| ||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 105783 cagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggga 105724 Query: 462 tccgcgcaccccaagaggaagggca 486 |||| |||||||||| ||||||| Sbjct: 105723 tccgttcaccccaagaaaaagggca 105699
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 105 bits (53), Expect = 1e-19 Identities = 105/121 (86%), Gaps = 6/121 (4%) Strand = Plus / Minus Query: 125 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 184 |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 19187083 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 19187027 Query: 185 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 241 |||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| Sbjct: 19187026 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 19186967 Query: 242 c 242 | Sbjct: 19186966 c 19186966 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 295 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccagcta 346 |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19184001 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 19183950 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 402 cagcagcagcagtgcggcagcaagggcaccggtgtcttcatcccccggtccacgcccggc 461 |||||||||| ||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 19183885 cagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggga 19183826 Query: 462 tccgcgcaccccaagaggaagggca 486 |||| |||||||||| ||||||| Sbjct: 19183825 tccgttcaccccaagaaaaagggca 19183801 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagcctcagcagcagcagtg 415 |||||||||||||||||||| Sbjct: 26281849 cagcctcagcagcagcagtg 26281830
>dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066C05, full insert sequence Length = 1104 Score = 105 bits (53), Expect = 1e-19 Identities = 105/121 (86%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 125 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 184 |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 158 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 214 Query: 185 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 241 |||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| Sbjct: 215 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 274 Query: 242 c 242 | Sbjct: 275 c 275 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 295 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccagcta 346 |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 328 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 379 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagcaagggcaccggtgtcttcatcccccggtccacgcccggc 461 |||||||||| ||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 444 cagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggga 503 Query: 462 tccgcgcaccccaagaggaagggca 486 |||| |||||||||| ||||||| Sbjct: 504 tccgttcaccccaagaaaaagggca 528
>dbj|AK066003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E21, full insert sequence Length = 2279 Score = 105 bits (53), Expect = 1e-19 Identities = 105/121 (86%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 125 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 184 |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 158 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 214 Query: 185 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 241 |||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| Sbjct: 215 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 274 Query: 242 c 242 | Sbjct: 275 c 275
>dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B09, full insert sequence Length = 603 Score = 105 bits (53), Expect = 1e-19 Identities = 105/121 (86%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 125 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 184 |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 157 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 213 Query: 185 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 241 |||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| Sbjct: 214 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 273 Query: 242 c 242 | Sbjct: 274 c 274 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 295 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccagcta 346 |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 327 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 378 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagcaagggcaccggtgtcttcatcccccggtccacgcccggc 461 |||||||||| ||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 443 cagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggga 502 Query: 462 tccgcgcaccccaagaggaagggca 486 |||| |||||||||| ||||||| Sbjct: 503 tccgttcaccccaagaaaaagggca 527
>ref|XM_475199.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 103 bits (52), Expect = 6e-19 Identities = 104/120 (86%), Gaps = 6/120 (5%) Strand = Plus / Plus Query: 126 atggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggatt 185 ||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| Sbjct: 1 atggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggata 57 Query: 186 tcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgcc 242 |||||||||||||| ||||||||||| ||||||||||||| |||| | ||||||||| Sbjct: 58 tcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgcc 117 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 295 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccagcta 346 |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 170 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 221 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagcaagggcaccggtgtcttcatcccccggtccacgcccggc 461 |||||||||| ||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 286 cagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggga 345 Query: 462 tccgcgcaccccaagaggaagggca 486 |||| |||||||||| ||||||| Sbjct: 346 tccgttcaccccaagaaaaagggca 370
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 112 agaggaggaggaagatggaggtggagatg 140 |||||||||||||||||||||||| |||| Sbjct: 93653 agaggaggaggaagatggaggtggggatg 93625
>ref|XM_572517.1| Cryptococcus neoformans var. neoformans JEC21 histone deacetylase 1 (hd1) (CNH03520) partial mRNA Length = 2099 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 112 agaggaggaggaagatggaggtggagatg 140 |||||||||||||||||||||||| |||| Sbjct: 195 agaggaggaggaagatggaggtggggatg 167
>gb|AY303939.1| Pichia angusta global transcription activator Snf2p (SNF2) gene, complete cds Length = 5118 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagca 409 |||||||||||||||||||||||| Sbjct: 874 gcagcaacaacagcctcagcagca 897
>ref|XM_808026.1| Trypanosoma cruzi strain CL Brener glycosyl hydrolase (Tc00.1047053506155.120) partial mRNA Length = 3510 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 |||||||||||||||||||||||| Sbjct: 1015 caacaacagcctcagcagcagcag 1038
>ref|XM_369667.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05797.4) partial mRNA Length = 1626 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 323 gttgttccaccacgccgccagct 345 ||||||||||||||||||||||| Sbjct: 1101 gttgttccaccacgccgccagct 1079
>ref|XM_462483.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G22924g) partial mRNA Length = 2064 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagca 412 ||||||||||||||||||||||| Sbjct: 1927 caacaacagcctcagcagcagca 1949
>ref|XM_453660.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D13398g predicted mRNA Length = 3975 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 ||||||||||||||||| ||||||||| Sbjct: 2857 cagcaacaacagcctcaacagcagcag 2883
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 506 ggccgccgtgcacaaggccaagg 528 ||||||||||||||||||||||| Sbjct: 3451246 ggccgccgtgcacaaggccaagg 3451268
>ref|XM_500419.1| Yarrowia lipolytica CLIB122, YALI0B02266g predicted mRNA Length = 2751 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 259 cagcaacaacagccacagcagcagcag 285
>ref|XM_501137.1| Yarrowia lipolytica CLIB122, YALI0B20460g predicted mRNA Length = 1461 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 265 cagcaacaacagccgcagcagcagcag 291
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 506 ggccgccgtgcacaaggccaagg 528 ||||||||||||||||||||||| Sbjct: 3325836 ggccgccgtgcacaaggccaagg 3325858
>emb|Y07908.1|DMSTPK D.melanogaster mRNA for serine/threonine protein kinase Length = 4519 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1149 cagcaacaacagccgcagcagcagcag 1175
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 390 caacaacagcctcagcagcagca 412 ||||||||||||||||||||||| Sbjct: 1755659 caacaacagcctcagcagcagca 1755637
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 ||||||||||||||||| ||||||||| Sbjct: 1156227 cagcaacaacagcctcaacagcagcag 1156253
>gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 190353 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 105962 cagcaacaacagccgcagcagcagcag 105988
>gb|AC093501.4| Drosophila melanogaster 3L BAC RP98-48E9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173497 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 73654 cagcaacaacagccgcagcagcagcag 73680
>ref|NM_167792.1| Drosophila melanogaster Protein kinase 61C CG1210-RH, transcript variant H (Pk61C), mRNA Length = 4005 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 640 cagcaacaacagccgcagcagcagcag 666
>ref|NM_167791.1| Drosophila melanogaster Protein kinase 61C CG1210-RF, transcript variant F (Pk61C), mRNA Length = 4137 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 772 cagcaacaacagccgcagcagcagcag 798
>ref|NM_167790.1| Drosophila melanogaster Protein kinase 61C CG1210-RD, transcript variant D (Pk61C), mRNA Length = 4367 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1002 cagcaacaacagccgcagcagcagcag 1028
>ref|NM_167789.1| Drosophila melanogaster Protein kinase 61C CG1210-RC, transcript variant C (Pk61C), mRNA Length = 4007 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 642 cagcaacaacagccgcagcagcagcag 668
>ref|NM_080382.2| Drosophila melanogaster Protein kinase 61C CG1210-RA, transcript variant A (Pk61C), mRNA Length = 4627 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1262 cagcaacaacagccgcagcagcagcag 1288
>gb|BT004489.1| Drosophila melanogaster LD22131 full insert cDNA Length = 3979 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1259 cagcaacaacagccgcagcagcagcag 1285
>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete sequence Length = 303512 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 119678 cagcaacaacagccgcagcagcagcag 119704
>gb|BT001263.1| Drosophila melanogaster AT02760 full insert cDNA Length = 2774 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 642 cagcaacaacagccgcagcagcagcag 668
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2698011 cagcaacaacagccgcagcagcagcag 2698037 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 387 cagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 336566 cagcaacaacagccacagcagcagcag 336540 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 906794 gcagcaacagcagccgcagcagcagcag 906767
>gb|DQ114456.1| Drosophila simulans #251.178 bicoid gene, partial sequence Length = 3586 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1495 gcagcaacaacaggctcagcagcagca 1521
>gb|DQ114455.1| Drosophila simulans #251.177 bicoid gene, partial sequence Length = 3584 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114454.1| Drosophila simulans #251.005 bicoid gene, partial sequence Length = 3595 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114453.1| Drosophila simulans #251.169 bicoid gene, partial sequence Length = 3595 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114452.1| Drosophila simulans #251.175 bicoid gene, partial sequence Length = 3595 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114451.1| Drosophila simulans #251.009 bicoid gene, partial sequence Length = 3586 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114450.1| Drosophila simulans #251.006 bicoid gene, partial sequence Length = 3595 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114449.1| Drosophila simulans #251.007 bicoid gene, partial sequence Length = 3586 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|DQ114448.1| Drosophila simulans #251.001 bicoid gene, partial sequence Length = 3586 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagca 412 ||||||||||||| ||||||||||||| Sbjct: 1504 gcagcaacaacaggctcagcagcagca 1530
>gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome 14, complete sequence Length = 207510 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcag 407 |||||||||||||||||||||| Sbjct: 151788 gcagcaacaacagcctcagcag 151809
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 388 agcaacaacagcctcagcagcagcag 413 ||||||| |||||||||||||||||| Sbjct: 119607 agcaacagcagcctcagcagcagcag 119632
>ref|XM_712328.1| Candida albicans SC5314 hypothetical protein (CaO19_8098), mRNA Length = 1929 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagca 412 |||||||||||||||||||| ||||| Sbjct: 649 cagcaacaacagcctcagcaacagca 674
>ref|XM_712238.1| Candida albicans SC5314 hypothetical protein (CaO19_467), mRNA Length = 1929 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagca 412 |||||||||||||||||||| ||||| Sbjct: 649 cagcaacaacagcctcagcaacagca 674
>ref|XM_781510.1| PREDICTED: Strongylocentrotus purpuratus similar to ataxin 2 (LOC581517), mRNA Length = 2697 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagca 412 ||||||||||||||||| |||||||| Sbjct: 2239 cagcaacaacagcctcatcagcagca 2264
>gb|AC130797.5| Chlamydomonas reinhardtii clone cr-1j6b, complete sequence Length = 80650 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagc 411 |||||||||||||||||| ||||||| Sbjct: 74472 gcagcaacaacagcctcaccagcagc 74447
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 tggcagcaacaacagcctcagcagca 409 ||||||||||| |||||||||||||| Sbjct: 1545492 tggcagcaacatcagcctcagcagca 1545467
>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete sequence Length = 224155 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 aagaggaggaggaagatggagg 132 |||||||||||||||||||||| Sbjct: 72518 aagaggaggaggaagatggagg 72497
>emb|CR387058.1| Gallus gallus finished cDNA, clone ChEST118g23 Length = 1587 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagc 411 ||||||||||||||||| |||||||| Sbjct: 172 gcagcaacaacagcctctgcagcagc 197
>gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y, complete sequence Length = 148342 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 cacctcccaccgggtttctcca 270 |||||||||||||||||||||| Sbjct: 25648 cacctcccaccgggtttctcca 25627
>emb|X72385.1|DCB2P D.carota mRNA for B2 protein Length = 935 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 caacagcctcagcagcagcagt 414 |||||||||||||||||||||| Sbjct: 72 caacagcctcagcagcagcagt 93
>gb|AY269976.1| Onychomys leucogaster dentin matrix protein 1 (DMP1) gene, exon 6 and partial cds Length = 1107 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tttccctgctactgctgtctg 38 ||||||||||||||||||||| Sbjct: 496 tttccctgctactgctgtctg 476
>gb|AY269975.1| Onychomys arenicola dentin matrix protein 1 (DMP1) gene, exon 6 and partial cds Length = 1095 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tttccctgctactgctgtctg 38 ||||||||||||||||||||| Sbjct: 502 tttccctgctactgctgtctg 482
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gctgctccgtccgtccttgcc 58 ||||||||||||||||||||| Sbjct: 1124238 gctgctccgtccgtccttgcc 1124218
>gb|AF064857.1| Homo sapiens BAC derived from chromosome 21q22.3, complete sequence, containing PEP19 (PCP4) gene Length = 199665 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 ccacctcccaccgggtttctccatg 272 ||||||||||||||||| ||||||| Sbjct: 182730 ccacctcccaccgggttcctccatg 182754
>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence Length = 172393 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 171739 gcagcaacaacagcagcagcagcagcagt 171711
>ref|XM_363776.1| Magnaporthe grisea 70-15 hypothetical protein (MG01702.4) partial mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcagc 411 ||||||||||||||||||| ||||| Sbjct: 862 cagcaacaacagcctcagccgcagc 886
>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence Length = 177788 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 caacagcctcagcagcagcag 413 ||||||||||||||||||||| Sbjct: 72319 caacagcctcagcagcagcag 72299
>ref|XM_871807.1| PREDICTED: Bos taurus similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, transcript variant 4 (LOC510552), mRNA Length = 2990 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagc 422 ||||||||||||||||||||| Sbjct: 342 cagcagcagcagtgcggcagc 362
>ref|XM_587705.2| PREDICTED: Bos taurus similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, transcript variant 1 (LOC510552), mRNA Length = 3190 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagc 422 ||||||||||||||||||||| Sbjct: 342 cagcagcagcagtgcggcagc 362
>ref|XM_871533.1| PREDICTED: Bos taurus similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, transcript variant 2 (LOC510552), mRNA Length = 728 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 cagcagcagcagtgcggcagc 422 ||||||||||||||||||||| Sbjct: 198 cagcagcagcagtgcggcagc 218
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 ccgccgtgcacaaggccaagg 528 ||||||||||||||||||||| Sbjct: 3917914 ccgccgtgcacaaggccaagg 3917894
>gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, complete sequence Length = 214848 Score = 42.1 bits (21), Expect = 1.8 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggaggtggagatgcagctggac 149 |||||||||||||| ||||| ||||| |||||||||| Sbjct: 191973 gaggaggaggaaga-ggaggaggagaagcagctggac 192008
>ref|XM_822158.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.1070) partial mRNA Length = 3093 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 385 ggcagcaacaacagcctcagcagcagcag 413 ||||||||||||||| |||||||||||| Sbjct: 2435 ggcagcaacaacagcaacagcagcagcag 2463
>ref|XM_566779.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA04170) partial mRNA Length = 1092 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 gctgctccgtccgtccttgcc 58 ||||||||||||||||||||| Sbjct: 76 gctgctccgtccgtccttgcc 96
>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence Length = 209508 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 gaggaggaggaagatggaggtggag 137 ||||||||||||||||| ||||||| Sbjct: 96989 gaggaggaggaagatggtggtggag 96965
>gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, complete sequence Length = 171990 Score = 42.1 bits (21), Expect = 1.8 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 113 gaggaggaggaagatggaggtggagatgcagctggac 149 |||||||||||||| ||||| ||||| |||||||||| Sbjct: 119261 gaggaggaggaaga-ggaggaggagaagcagctggac 119226
>gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence Length = 197860 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 383 gtggcagcaacaacagcctcagcagcagcagtg 415 |||||||||||| |||| |||||||||||||| Sbjct: 10693 gtggcagcaacagcagcagcagcagcagcagtg 10661
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 ccacctcccaccgggtttctccatg 272 ||||||||||||||||| ||||||| Sbjct: 130431 ccacctcccaccgggttcctccatg 130455
>emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 in linkage group 16, complete sequence Length = 169758 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 ctgttttccctgctactgctgtctg 38 |||||||||||||| |||||||||| Sbjct: 53830 ctgttttccctgctgctgctgtctg 53854
>emb|AL139038.18| Human DNA sequence from clone RP11-456B18 on chromosome 13, complete sequence Length = 140756 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cacctcccaccgggtttctcc 269 ||||||||||||||||||||| Sbjct: 15076 cacctcccaccgggtttctcc 15096
>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence Length = 187936 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cacctcccaccgggtttctcc 269 ||||||||||||||||||||| Sbjct: 99921 cacctcccaccgggtttctcc 99901
>ref|NM_001005083.1| Xenopus tropicalis small nuclear ribonucleoprotein polypeptide F (MGC89662), mRNA Length = 576 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggag 131 ||||||||||||||||||||| Sbjct: 359 aagaggaggaggaagatggag 379
>gb|BC077006.1| Xenopus tropicalis small nuclear ribonucleoprotein polypeptide F, mRNA (cDNA clone MGC:89662 IMAGE:7026112), complete cds Length = 576 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggag 131 ||||||||||||||||||||| Sbjct: 359 aagaggaggaggaagatggag 379
>gb|AY118689.1| Drosophila melanogaster AT15637 full insert cDNA Length = 3773 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 2356 gcagcaacaacagcagcagcagcagcagt 2384
>ref|NM_176241.1| Drosophila melanogaster CG10543-RC, transcript variant C (CG10543), mRNA Length = 3722 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 2352 gcagcaacaacagcagcagcagcagcagt 2380
>ref|NM_166416.1| Drosophila melanogaster CG10543-RB, transcript variant B (CG10543), mRNA Length = 3726 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 2356 gcagcaacaacagcagcagcagcagcagt 2384
>ref|NM_137690.2| Drosophila melanogaster CG10543-RA, transcript variant A (CG10543), mRNA Length = 5552 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 4182 gcagcaacaacagcagcagcagcagcagt 4210
>gb|AC023134.5| Homo sapiens chromosome 5 clone RP11-463C5, complete sequence Length = 172805 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ctcctcatcaccgacgacgacgagg 213 |||||||||||||| |||||||||| Sbjct: 104700 ctcctcatcaccgatgacgacgagg 104676
>gb|AC099310.1| Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR05G05, complete sequence Length = 163979 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 385 ggcagcaacaacagcctcagcagcagcag 413 ||||||||||||||| |||||||||||| Sbjct: 47036 ggcagcaacaacagcagcagcagcagcag 47008
>gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, complete sequence Length = 220932 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 ctcctcatcaccgacgacgacgagg 213 |||||||||||||| |||||||||| Sbjct: 141981 ctcctcatcaccgatgacgacgagg 142005
>gb|AC025439.5| Homo sapiens chromosome 5 clone CTC-480E9, complete sequence Length = 125278 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ctcctcatcaccgacgacgacgagg 213 |||||||||||||| |||||||||| Sbjct: 95584 ctcctcatcaccgatgacgacgagg 95560
>gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosome 17, complete sequence Length = 208266 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 aagaggaggaggaagatggaggtgg 135 |||||||||||||||| |||||||| Sbjct: 67787 aagaggaggaggaagagggaggtgg 67763
>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence Length = 190044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cacctcccaccgggtttctcc 269 ||||||||||||||||||||| Sbjct: 104343 cacctcccaccgggtttctcc 104363
>dbj|AK044004.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830080E23 product:unclassifiable, full insert sequence Length = 1839 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 caacagcctcagcagcagcag 413 ||||||||||||||||||||| Sbjct: 1520 caacagcctcagcagcagcag 1540
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcatcaccgacgacgacga 211 ||||||||||||||||||||| Sbjct: 10777407 cctcatcaccgacgacgacga 10777387
>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR28F20, complete sequence Length = 158895 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcaacaacagcctcagcagcagcag 413 |||||||||||| |||||||||||| Sbjct: 66158 gcaacaacagccgcagcagcagcag 66134 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 28948 gcagcaacaacagcagcagcagcagcag 28975
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 30868 gcagcaacaacagcagcagcagcagcagt 30840
>gb|AC016732.7| Homo sapiens BAC clone RP11-389E16 from 2, complete sequence Length = 176741 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctgttttccctgctac 29 ||||||||||||||||||||| Sbjct: 58316 tccctctgttttccctgctac 58336
>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 4 (XRCC4) gene, complete cds Length = 279061 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ctcctcatcaccgacgacgacgagg 213 |||||||||||||| |||||||||| Sbjct: 267147 ctcctcatcaccgatgacgacgagg 267123
>emb|AL954229.2|PTB103H04 Pan troglodytes chromosome 22 BAC PTB-103H04, complete sequence Length = 187866 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 ccacctcccaccgggtttctccatg 272 ||||||||||||||||| ||||||| Sbjct: 49003 ccacctcccaccgggttcctccatg 49027
>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete sequence Length = 231455 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gcaacaacagcctcagcagcagcag 413 |||||||||||| |||||||||||| Sbjct: 176447 gcaacaacagccgcagcagcagcag 176423 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 139237 gcagcaacaacagcagcagcagcagcag 139264
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 385 ggcagcaacaacagcctcagcagcagcag 413 ||||||||||||||| |||||||||||| Sbjct: 224461 ggcagcaacaacagcagcagcagcagcag 224489
>emb|CR942765.2| Xenopus tropicalis finished cDNA, clone TNeu139h07 Length = 567 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggag 131 ||||||||||||||||||||| Sbjct: 252 aagaggaggaggaagatggag 272
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 220400 gcagcaacaacagcagcagcagcagcagt 220428
>gb|AC131231.10| Mus musculus chromosome 19, clone RP24-395L19, complete sequence Length = 181700 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 383 gtggcagcaacaacagcctcagcagcagcagtg 415 |||||||||||| |||| |||||||||||||| Sbjct: 20490 gtggcagcaacagcagcagcagcagcagcagtg 20522
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcatcaccgacgacgacga 211 ||||||||||||||||||||| Sbjct: 10777106 cctcatcaccgacgacgacga 10777086
>gb|AC005268.1|AC005268 Drosophila melanogaster DNA sequence (P1s DS03550 (D225) and DS02397 (D206)), complete sequence Length = 89791 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcagt 414 |||||||||||||| ||||||||||||| Sbjct: 59329 gcagcaacaacagcagcagcagcagcagt 59301
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcatcaccgacgacgacga 211 ||||||||||||||||||||| Sbjct: 43756 cctcatcaccgacgacgacga 43736
>gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, complete sequence Length = 192877 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggag 131 ||||||||||||||||||||| Sbjct: 11866 aagaggaggaggaagatggag 11886
>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence Length = 189288 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggag 131 ||||||||||||||||||||| Sbjct: 188974 aagaggaggaggaagatggag 188994
>gb|AY854873.1| Drosophila ezoana strain 15010-0971.2 embryonic lethal abnormal vision protein (elav) gene, partial cds Length = 1033 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 185 gcagcaacaacagcagcagcagcagcag 212
>gb|AY653187.1| Pan troglodytes Thap11 (Thap11) gene, partial cds Length = 145 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 31 gcagcaacaacagcaacagcagcagcag 58
>gb|AY653184.1| Papio hamadryas Thap11 (Thap11) gene, partial cds Length = 143 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 31 gcagcaacaacagcagcagcagcagcag 58
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 59923 gcagcaacaacagcagcagcagcagcag 59950
>gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like protein doppel (PRND) genes, complete cds; PRNT (PRNT) gene, exons 1 and 2; and putative protein gene, complete cds Length = 104027 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tccctgctactgctgtctgctgct 43 |||||||||||||| ||||||||| Sbjct: 42272 tccctgctactgctctctgctgct 42295
>ref|NM_122744.2| Arabidopsis thaliana unknown protein AT5G28610 mRNA, complete cds Length = 389 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggaggtggagatg 140 |||||||||||||||| |||||||||| Sbjct: 300 gaggaggaggaagatgatggtggagatg 327
>ref|NM_113793.2| Arabidopsis thaliana unknown protein AT3G28720 mRNA, complete cds Length = 2172 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 63 gaggaggaggaagatggagg 44
>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence Length = 236139 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||| || |||||||||||||||||| Sbjct: 55126 gcagcagcagcagcctcagcagcagcag 55099
>gb|AY653191.1| Presbytis entellus brm (brm) gene, partial cds Length = 254 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 170 gcagcaacagcagccgcagcagcagcag 197
>gb|AY653190.1| Papio hamadryas brm (brm) gene, partial cds Length = 254 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 170 gcagcaacagcagccgcagcagcagcag 197
>gb|AY653189.1| Macaca mulatta brm (brm) gene, partial cds Length = 257 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 170 gcagcaacagcagccgcagcagcagcag 197
>gb|AY653188.1| Macaca radiata brm (brm) gene, partial cds Length = 257 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 170 gcagcaacagcagccgcagcagcagcag 197
>gb|AC165299.13| Mus musculus chromosome 15, clone RP23-266F2, complete sequence Length = 186266 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 gaggaggaggaagatggaggtggagatg 140 |||||||||||||| ||||| ||||||| Sbjct: 57702 gaggaggaggaagaaggaggaggagatg 57675
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence Length = 258544 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gaggaggaagatggaggtgg 135 |||||||||||||||||||| Sbjct: 7532 gaggaggaagatggaggtgg 7551
>gb|AC152889.1| Ornithorhynchus anatinus chromosome UNK clone OABb-513A1, complete sequence Length = 115833 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctgctactgctgtctgctg 41 |||||||||||||||||||| Sbjct: 72356 cctgctactgctgtctgctg 72337
>gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, complete sequence Length = 153700 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagc 405 |||||||||||||||||||| Sbjct: 134640 gcagcaacaacagcctcagc 134659
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence Length = 212628 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 55953 gaggaggaggaagatggagg 55972
>ref|XM_511041.1| PREDICTED: Pan troglodytes similar to THAP domain protein 11 (HRIHFB2206) (LOC454176), mRNA Length = 1222 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 321 gcagcaacaacagcaacagcagcagcag 348
>ref|XM_522550.1| PREDICTED: Pan troglodytes nuclear receptor co-repressor 2 (LOC467150), mRNA Length = 15642 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 5880 gcagcaacaacagcagcagcagcagcag 5907
>ref|XM_469981.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gcaacaacagcctcagcagcagca 412 ||||||||||| |||||||||||| Sbjct: 1680 gcaacaacagcatcagcagcagca 1703
>ref|XM_469962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1796 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tggacgacgacgtcttcttc 164 |||||||||||||||||||| Sbjct: 62 tggacgacgacgtcttcttc 43
>ref|NM_001003321.1| Canis familiaris dolichyl-diphosphooligosaccharide-protein glycosyltransferase (DDOST), mRNA Length = 1597 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 9 gaggaggaggaagatggagg 28
>ref|XM_450368.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||| ||||||| |||||||||||| Sbjct: 470 gcagcaagaacagccgcagcagcagcag 497
>ref|NM_015409.3| Homo sapiens E1A binding protein p400 (EP400), mRNA Length = 12265 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 8278 gcagcaacaacagcagcagcagcagcag 8305
>gb|BC046535.1| Mus musculus polyhomeotic-like 1 (Drosophila), mRNA (cDNA clone MGC:51580 IMAGE:4935713), complete cds Length = 3901 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1387 gcagcaacaacagcaacagcagcagcag 1414
>ref|NM_021521.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast) (Med12), mRNA Length = 6462 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 6153 gcagcaacaacagcaacagcagcagcag 6180
>gb|BT016106.1| Drosophila melanogaster LD20133 full insert cDNA Length = 4346 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1324 gcagcaacaacagcagcagcagcagcag 1351
>gb|U80761.1|HSU80761 Homo sapiens CTG26 alternate open reading frame mRNA, complete cds Length = 560 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 351 gcagcaacaacagcagcagcagcagcag 324
>gb|U80750.1|HSU80750 Homo sapiens CTG26 mRNA, partial cds Length = 560 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 203 gcagcaacaacagcagcagcagcagcag 230
>gb|AY368204.1| Homo sapiens TATA box binding protein (TBP) gene, partial cds Length = 234 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 63 gcagcaacaacagcagcagcagcagcag 90
>gb|AF380993.1| Musca domestica microsatellite MdCAG78 sequence Length = 413 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 99 gcagcaacaacagcagcagcagcagcag 126
>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete sequence Length = 202729 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagc 405 |||||||||||||||||||| Sbjct: 25924 gcagcaacaacagcctcagc 25943
>gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-549H18, CT7-552o8, proximal part, complete sequence Length = 107641 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 57867 gcagcaacaacagcaacagcagcagcag 57894
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 213443 gaggaggaggaagatggagg 213462
>gb|AC121511.12| Mus musculus chromosome 18, clone RP24-389K16, complete sequence Length = 151000 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 45901 gcagcaacaacagcaacagcagcagcag 45874
>gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete sequence Length = 172939 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||||||||| || ||||||||| Sbjct: 164503 gcagcaacaacagccacaacagcagcag 164476
>gb|AC008345.4| Drosophila melanogaster clone BACR22J12, complete sequence Length = 156404 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 42637 gcagcaacaacagcagcagcagcagcag 42610
>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence Length = 185786 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 acagcctcagcagcagcagt 414 |||||||||||||||||||| Sbjct: 21577 acagcctcagcagcagcagt 21558
>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence Length = 166423 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||||||||| || ||||||||| Sbjct: 94668 gcagcaacaacagccacaacagcagcag 94641
>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence Length = 186333 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 148868 gcagcaacaacagcaacagcagcagcag 148841
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 161058 gcagcaacaacagcagcagcagcagcag 161085
>gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete sequence Length = 176231 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||| ||||||| ||||||||||||| Sbjct: 160169 gcagcagcaacagcatcagcagcagcag 160142
>ref|XM_423998.1| PREDICTED: Gallus gallus similar to qMEF2D protein (LOC426338), partial mRNA Length = 575 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 158 gcagcaacaacagcagcagcagcagcag 185 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 131 gcagcaacaacagcaacagcagcagcag 158
>ref|XM_366932.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG03008.4) partial mRNA Length = 2910 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 ||||||||||| |||||||||||| Sbjct: 2302 caacaacagccgcagcagcagcag 2325
>ref|XM_367703.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07614.4) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 171 gcagcaacaacagcagcagcagcagcag 198
>gb|DQ507811.1| Phyllotreta nemorum clone AB12 microsatellite sequence Length = 267 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 156 gcagcaacaacagcagcagcagcagcag 129
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tggacgacgacgtcttcttc 164 |||||||||||||||||||| Sbjct: 27735 tggacgacgacgtcttcttc 27754
>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence Length = 185801 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 12463 aagaggaggaggaagaggaaggtggaga 12436
>gb|BC019366.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone MGC:30552 IMAGE:5066908), complete cds Length = 2610 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 2285 aagaggaggaggaagaggaaggtggaga 2312
>gb|BC031846.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone MGC:30551 IMAGE:5066822), complete cds Length = 2609 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 2285 aagaggaggaggaagaggaaggtggaga 2312
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagcctcagcagcagcagtg 415 |||||||||||||||||||| Sbjct: 132897 cagcctcagcagcagcagtg 132878
>ref|XM_601446.2| PREDICTED: Bos taurus similar to transcription factor 20 isoform 1 (LOC523151), mRNA Length = 7318 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1011 gcagcaacaacagcagcagcagcagcag 1038
>gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-like protein doppel preproprotein (PRND) genes, complete cds; and RASSF2 gene, complete sequence Length = 207929 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tccctgctactgctgtctgctgct 43 |||||||||||||| ||||||||| Sbjct: 54537 tccctgctactgctctctgctgct 54560
>ref|NM_006312.2| Homo sapiens nuclear receptor co-repressor 2 (NCOR2), mRNA Length = 8854 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1754 gcagcaacaacagcagcagcagcagcag 1781
>ref|NM_011424.1| Mus musculus nuclear receptor co-repressor 2 (Ncor2), mRNA Length = 8544 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1653 gcagcaacaacagcagcagcagcagcag 1680
>ref|NM_153055.2| Mus musculus SEC63-like (S. cerevisiae) (Sec63), mRNA Length = 2631 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 2291 aagaggaggaggaagaggaaggtggaga 2318
>ref|XM_652665.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0153.2), mRNA Length = 2559 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 cagcaacaacagcctcagcagcag 410 |||||||||||| ||||||||||| Sbjct: 1627 cagcaacaacaggctcagcagcag 1650
>ref|XM_451236.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A05346g predicted mRNA Length = 2625 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1563 gcagcaacaacagcaacagcagcagcag 1590
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence Length = 191100 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 163381 gcagcaacaacagcagcagcagcagcag 163354
>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence Length = 227127 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 202063 gcagcaacaacagcagcagcagcagcag 202090 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 201850 gcagcaacaacagcagcagcagcagcag 201877 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 201631 gcagcaacaacagcagcagcagcagcag 201658
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 6297 gaggaggaggaagatggagg 6316
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 gcagcagtgcggcagcaagggcac 430 |||||||||| ||||||||||||| Sbjct: 4178940 gcagcagtgcagcagcaagggcac 4178963
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctgttttccctgcta 28 |||||||||||||||||||| Sbjct: 139832 tccctctgttttccctgcta 139813
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 |||||||| ||||||||||||||| Sbjct: 72499 caacaacaacctcagcagcagcag 72522
>gb|BC057119.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:6830443), partial cds Length = 6642 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 6216 gcagcaacaacagcaacagcagcagcag 6243
>gb|BC057085.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:5719350), complete cds Length = 3321 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2790 gcagcaacaacagcaacagcagcagcag 2817
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence Length = 227254 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 acagcctcagcagcagcagt 414 |||||||||||||||||||| Sbjct: 118516 acagcctcagcagcagcagt 118535
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gcaacaacagcctcagcagcagca 412 ||||||||||| |||||||||||| Sbjct: 33171149 gcaacaacagcatcagcagcagca 33171126 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tggacgacgacgtcttcttc 164 |||||||||||||||||||| Sbjct: 32716172 tggacgacgacgtcttcttc 32716153
>ref|XM_850318.1| PREDICTED: Canis familiaris similar to shroom (LOC612585), mRNA Length = 5145 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 4029 gcagcaacaacagcagcagcagcagcag 4056
>ref|XM_898704.2| PREDICTED: Mus musculus RIKEN cDNA G630014P10 gene, transcript variant 2 (G630014P10Rik), mRNA Length = 3352 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1573 gcagcaacaacagcaacagcagcagcag 1600
>ref|XM_990775.1| PREDICTED: Mus musculus RIKEN cDNA G630014P10 gene (G630014P10Rik), mRNA Length = 3352 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1573 gcagcaacaacagcaacagcagcagcag 1600
>ref|XM_972820.1| PREDICTED: Mus musculus RIKEN cDNA G630014P10 gene (G630014P10Rik), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1272 gcagcaacaacagcaacagcagcagcag 1299
>ref|XM_975371.1| PREDICTED: Mus musculus RIKEN cDNA G630014P10 gene (G630014P10Rik), mRNA Length = 3325 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1573 gcagcaacaacagcaacagcagcagcag 1600
>gb|BT011527.1| Drosophila melanogaster RE32262 full insert cDNA Length = 3390 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2064 gcagcaacaacagcagcagcagcagcag 2091
>ref|XM_972625.1| PREDICTED: Mus musculus coiled-coil domain containing 16 (Ccdc16), mRNA Length = 1773 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||| ||||| ||||||||||| Sbjct: 498 aagaggaggaagaagagggaggtggaga 525
>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence Length = 176109 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 acctcccaccgggtttctcc 269 |||||||||||||||||||| Sbjct: 67538 acctcccaccgggtttctcc 67557
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 160508 gcagcaacaacagcagcagcagcagcag 160535
>gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, complete cds Length = 65476 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tccctgctactgctgtctgctgct 43 |||||||||||||| ||||||||| Sbjct: 17343 tccctgctactgctctctgctgct 17366
>ref|XM_534801.2| PREDICTED: Canis familiaris similar to transcription factor CP2 (LOC477607), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1494 gcagcaacaacagcagcagcagcagcag 1521
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ggaagatggaggtggagatg 140 |||||||||||||||||||| Sbjct: 152723 ggaagatggaggtggagatg 152742
>ref|XM_856835.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 10 (LOC612838), mRNA Length = 5810 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3773 gcagcaacaacagcaacagcagcagcag 3800
>ref|XM_856810.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 9 (LOC612838), mRNA Length = 5597 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3560 gcagcaacaacagcaacagcagcagcag 3587
>ref|XM_845523.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 1 (LOC612838), mRNA Length = 5906 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3869 gcagcaacaacagcaacagcagcagcag 3896
>ref|XM_856753.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 8 (LOC612838), mRNA Length = 5156 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3119 gcagcaacaacagcaacagcagcagcag 3146
>ref|XM_856725.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 7 (LOC612838), mRNA Length = 5738 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3701 gcagcaacaacagcaacagcagcagcag 3728
>ref|XM_856695.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 6 (LOC612838), mRNA Length = 5777 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3740 gcagcaacaacagcaacagcagcagcag 3767
>ref|XM_856669.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 5 (LOC612838), mRNA Length = 3778 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1741 gcagcaacaacagcaacagcagcagcag 1768
>ref|XM_856639.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 4 (LOC612838), mRNA Length = 5279 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3242 gcagcaacaacagcaacagcagcagcag 3269
>ref|XM_856609.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 15, transcript variant 3 (LOC612838), mRNA Length = 5828 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3791 gcagcaacaacagcaacagcagcagcag 3818
>ref|XM_756908.1| Ustilago maydis 521 hypothetical protein (UM05854.1) partial mRNA Length = 4965 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 4773 gcagcaacaacagcagcagcagcagcag 4800
>ref|XM_751543.1| Ustilago maydis 521 hypothetical protein (UM00489.1) partial mRNA Length = 2874 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 43 gcagcaacaacagcagcagcagcagcag 16
>ref|XM_752147.1| Ustilago maydis 521 hypothetical protein (UM01093.1) partial mRNA Length = 4551 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 ||||| |||||||||||||||||| Sbjct: 3304 caacagcagcctcagcagcagcag 3327
>emb|AJ297292.1|PNI297292 Populus nigra microsatellite DNA, clone WPMS19 Length = 451 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 |||||||||| ||||||||||||| Sbjct: 180 caacaacagcatcagcagcagcag 203
>emb|AJ297287.1|PNI297287 Populus nigra microsatellite DNA, clone WPMS14 Length = 451 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagcagcag 413 |||||||||| ||||||||||||| Sbjct: 180 caacaacagcatcagcagcagcag 203
>emb|AJ875064.1| Helicoverpa armigera microsatellite DNA, CryiAc susceptible individual Length = 491 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 293 gcagcaacaacagcagcagcagcagcag 320 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 141 gcagcaacaacagcagcagcagcagcag 114
>emb|AJ875063.1| Helicoverpa armigera microsatellite DNA, CryiAc resistant individual Length = 479 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 275 gcagcaacaacagcagcagcagcagcag 302 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 147 gcagcaacaacagcagcagcagcagcag 120
>emb|AJ504788.1|HAR504788 Helicoverpa armigera microsatellite DNA, clone C53 Length = 435 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 353 gcagcaacaacagcagcagcagcagcag 326
>emb|BX936329.9| Zebrafish DNA sequence from clone CH211-1F1 in linkage group 3, complete sequence Length = 76179 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||| |||||| Sbjct: 52709 gcagcaacaacagcttcagcaacagcag 52682
>gb|BT010797.1| Arabidopsis thaliana At5g28610 mRNA, complete cds Length = 473 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggaggtggagatg 140 |||||||||||||||| |||||||||| Sbjct: 285 gaggaggaggaagatgatggtggagatg 312
>gb|AC132118.3| Mus musculus BAC clone RP23-467C14 from chromosome 5, complete sequence Length = 175070 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 18599 gcagcaacaacagcagcagcagcagcag 18572
>gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosome 1, complete sequence Length = 152726 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 100954 gaggaggaggaagatggagg 100973
>gb|AY300798.1| Ulmus laevis clone Ulm3 mirosatellite sequence Length = 175 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 104 gcagcaacaacagcagcagcagcagcag 131 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 32 gcagcaacaacagcagcagcagcagcag 59
>emb|Z49888.1|CEF47A4 Caenorhabditis elegans Cosmid F47A4, complete sequence Length = 37680 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcaacaacagcctcagcagc 408 |||||||||||||||||||| Sbjct: 7331 gcaacaacagcctcagcagc 7312
>gb|AC104095.4| Mus musculus BAC clone RP23-403G12 from chromosome 19, complete sequence Length = 187859 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 71364 gcagcaacaacagcagcagcagcagcag 71391
>emb|CR956396.6| Pig DNA sequence from clone CH242-205N12 on chromosome 7, complete sequence Length = 175108 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 8892 gcagcaacaacagcagcagcagcagcag 8865
>emb|CR847546.6| Zebrafish DNA sequence from clone CH211-261D5 in linkage group 1, complete sequence Length = 147811 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 104242 gcagcaacaacagcagcagcagcagcag 104269
>gb|AC125206.3| Mus musculus BAC clone RP23-240G3 from 10, complete sequence Length = 184252 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 21943 aagaggaggaggaagaggaaggtggaga 21970
>gb|BC029774.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone IMAGE:4952348), partial cds Length = 2921 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||||||||| | ||||||||| Sbjct: 1522 aagaggaggaggaagaggaaggtggaga 1549
>gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, complete sequence Length = 147837 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 acctcccaccgggtttctcc 269 |||||||||||||||||||| Sbjct: 43891 acctcccaccgggtttctcc 43910
>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence Length = 233476 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctgttttccctgcta 28 |||||||||||||||||||| Sbjct: 226325 tccctctgttttccctgcta 226306
>gb|AF098501.2| Caenorhabditis elegans fosmid H28G03, complete sequence Length = 44352 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 caacaacagcctcagcagca 409 |||||||||||||||||||| Sbjct: 2025 caacaacagcctcagcagca 2044
>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence Length = 206979 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 caacaacagcctcagcagcagcag 413 |||||||| ||||||||||||||| Sbjct: 3108 caacaacaacctcagcagcagcag 3085
>gb|DQ139979.1| Simian immunodeficiency virus isolate DT97 envelope glycoprotein (env) gene, partial cds Length = 2658 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gacagctccaagaggaggag 121 |||||||||||||||||||| Sbjct: 1140 gacagctccaagaggaggag 1159
>gb|AY098743.2| Oryza sativa (japonica cultivar-group) globulin-like protein mRNA, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tggacgacgacgtcttcttc 164 |||||||||||||||||||| Sbjct: 28 tggacgacgacgtcttcttc 9
>gb|BC110696.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:5702212), partial cds Length = 3818 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1955 gcagcaacaacagcaacagcagcagcag 1982
>ref|XM_500582.1| Yarrowia lipolytica CLIB122, YALI0B06809g predicted mRNA Length = 1122 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 ||||||||| ||||| |||||||||||| Sbjct: 1047 gcagcaacagcagccgcagcagcagcag 1074
>gb|BT010236.1| Drosophila melanogaster RE53556 full insert cDNA Length = 3426 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2409 gcagcaacaacagcagcagcagcagcag 2436
>gb|BT010004.1| Drosophila melanogaster RE29225 full insert cDNA Length = 1792 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 558 gcagcaacaacagcaacagcagcagcag 585 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 333 gcagcaacaacagcaacagcagcagcag 360
>emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on chromosome 10 Contains the 5' end of the gene for KIAA0940 protein, a succinate dehydrogenase complex pseudogene, the 5' end of a novel gene (FLJ20445), a nucleolar protein family A member 2 pseudogene 1 (NOLA2P1) and a CpG island, complete sequence Length = 213648 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 acctcccaccgggtttctcc 269 |||||||||||||||||||| Sbjct: 86475 acctcccaccgggtttctcc 86456
>gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102102 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 gatggaggtggagatgcagctgga 148 ||||||| |||||||||||||||| Sbjct: 10274 gatggagctggagatgcagctgga 10297
>emb|AL080250.11|HSJ234P15 Human DNA sequence from clone RP1-234P15 on chromosome 6q13-14.3 contains the 5' end of the COL12A1 gene for collagen type XII alpha 1, the COX7A2 gene for cytochrome c oxidase subunit VIIa polypeptide 2 (liver), two novel genes and three CpG islands, complete sequence Length = 125641 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 agaggaggaggaagatggaggtgg 135 ||||| |||||||||||||||||| Sbjct: 25145 agagggggaggaagatggaggtgg 25122
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence Length = 238599 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gaggaggaggaagatggagg 132 |||||||||||||||||||| Sbjct: 33931 gaggaggaggaagatggagg 33912
>emb|AL021367.1|HS443E24 Human DNA sequence from clone RP3-443E24 on chromosome 6q16 Contains the 3' end of a novel gene, complete sequence Length = 139350 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagatggaggtggagatgca 142 |||||||||||||||||||| Sbjct: 93700 aagatggaggtggagatgca 93681
>gb|AC130388.6| Drosophila melanogaster X BAC CH221-14P20 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 117795 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 88913 gcagcaacaacagcagcagcagcagcag 88886
>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160100 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 113036 gcagcaacaacagcagcagcagcagcag 113063
>emb|X54674.1|SGHBEX S. gregaria DNA homologue of Drosophila abdominal-A homeobox exon Length = 657 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 363 gcagcaacaacagcaacagcagcagcag 390
>emb|X53275.1|DMBIBGENE D.melanogaster RNA for big brain neurogenic gene Length = 3315 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1776 gcagcaacaacagcagcagcagcagcag 1803
>ref|NM_001031600.1| Gallus gallus similar to SRF-related protein (LOC431059), mRNA Length = 3845 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1562 gcagcaacaacagcaacagcagcagcag 1589
>emb|CR861221.1| Pongo pygmaeus mRNA; cDNA DKFZp459H173 (from clone DKFZp459H173) Length = 3120 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatgga 130 |||||||||||||||||||| Sbjct: 493 aagaggaggaggaagatgga 512
>gb|BT023751.1| Drosophila melanogaster RH56202 full insert cDNA Length = 7622 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2782 gcagcaacaacagcaacagcagcagcag 2809
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 487448 gcagcaacaacagcaacagcagcagcag 487475
>gb|AY587038.1| Anas platyrhynchos microsatellite CAUD119 sequence Length = 327 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 184 gcagcaacaacagcagcagcagcagcag 211
>emb|AL645594.9| Mouse DNA sequence from clone RP23-316C11 on chromosome 11 Contains the Cct6b gene for chaperonin subunit 6b (zeta), a barrier to autointegration factor 1 (Banf1) pseudogene, a GTP binding protein 3 (Gtpbp3) pseudogene, a ribosomal protein S20 (Rps20) pseudogene, three novel genes, the Lig3 gene for ATP-dependent DNA ligase III,, complete sequence Length = 178364 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 aagaggaggaggaagatggaggtggaga 138 |||||||||| ||||| ||||||||||| Sbjct: 85518 aagaggaggaagaagagggaggtggaga 85545
>emb|AL133504.2|DMBH7M4 Drosophila melanogaster BAC clone BACH7M4 Length = 48553 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 45474 gcagcaacaacagcaacagcagcagcag 45447 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 45249 gcagcaacaacagcaacagcagcagcag 45222
>emb|AJ002238.1|CCJ002238 Coturnix coturnix japonica qMEF2D gene Length = 3149 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1188 gcagcaacaacagcaacagcagcagcag 1215 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1164 gcagcaacaacagcagcagcagcagcag 1191
>gb|AF351096.1| Genista tinctoria isolate GENTIN_239 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 546 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gcacaaggccaaggcgcagg 534 |||||||||||||||||||| Sbjct: 425 gcacaaggccaaggcgcagg 406
>gb|AF351095.1| Genista tinctoria isolate GENTIN_234 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gcacaaggccaaggcgcagg 534 |||||||||||||||||||| Sbjct: 424 gcacaaggccaaggcgcagg 405
>gb|AF351094.2| Genista tinctoria isolate GENTIN_230 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 613 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gcacaaggccaaggcgcagg 534 |||||||||||||||||||| Sbjct: 425 gcacaaggccaaggcgcagg 406
>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21) pseudogene and the 3' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1, complete sequence Length = 238358 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aagaggaggaggaagatgga 130 |||||||||||||||||||| Sbjct: 32662 aagaggaggaggaagatgga 32643
>emb|AJ719684.1| Gallus gallus mRNA for hypothetical protein, clone 5e9 Length = 3845 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 1562 gcagcaacaacagcaacagcagcagcag 1589
>gb|AC010043.7| Drosophila melanogaster 3L BAC RP98-12K4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184657 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 116125 gcagcaacaacagcagcagcagcagcag 116152
>gb|AC104142.6| Drosophila melanogaster X BAC RP98-13K19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186753 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 185287 gcagcaacaacagcaacagcagcagcag 185260 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 185062 gcagcaacaacagcaacagcagcagcag 185035
>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 178770 gcagcaacaacagcagcagcagcagcag 178743
>gb|AC023736.4| Drosophila melanogaster X BAC RP98-4P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165052 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 127338 gcagcaacaacagcagcagcagcagcag 127365
>gb|AC104054.6| Drosophila melanogaster X BAC RP98-21G11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170347 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 34094 gcagcaacaacagcaacagcagcagcag 34067 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 33869 gcagcaacaacagcaacagcagcagcag 33842
>gb|AY129453.1| Drosophila melanogaster RE25591 full insert cDNA Length = 3918 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 2290 gcagcaacaacagcagcagcagcagcag 2317
>gb|AC100835.2| Homo sapiens chromosome 15, clone CTD-3154N5, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 caacagcctcagcagcagca 412 |||||||||||||||||||| Sbjct: 129915 caacagcctcagcagcagca 129934
>dbj|AK220216.1| Mus musculus mRNA for mKIAA0192 protein Length = 3463 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3180 gcagcaacaacagcaacagcagcagcag 3207
>gb|AC010023.6| Drosophila melanogaster 3L BAC RP98-19G23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161175 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 gcagcaacaacagcctcagcagcagcag 413 |||||||||||||| |||||||||||| Sbjct: 3335 gcagcaacaacagcagcagcagcagcag 3308 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,899,538 Number of Sequences: 3902068 Number of extensions: 5899538 Number of successful extensions: 258755 Number of sequences better than 10.0: 572 Number of HSP's better than 10.0 without gapping: 571 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 255138 Number of HSP's gapped (non-prelim): 3610 length of query: 535 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 512 effective length of database: 17,143,297,704 effective search space: 8777368424448 effective search space used: 8777368424448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)