Clone Name | bart40a06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_190973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| |||||| |||||| ||||||| | |||||||||||||| Sbjct: 82 cccaagaagaagcctcgcacccatggactcaagtcctaccccgtggtcggcacgctgccg 141 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 || ||| |||| ||| ||||||| ||||| ||||||| |||||||||||| |||||||| Sbjct: 142 catttcatcaataacaaggaccgtttccttgagtggtcgaccggcgtcatgaagcgcagc 201 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||||||||| || | ||||||| | |||| ||||||||||||| |||||||||| || Sbjct: 202 cccacgcacaccatgtcgttcaaggagctcggactcaccggcggcgtcatcaccgccaac 261 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 262 ccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaagggcgagctt 321 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || ||| ||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 322 gccgtgtccttgctcgaggattttcttggccacggcatcttcaattccgacggcgaacag 381 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 382 tggctatggcagcggaaggccgccagttacgagttcaacaagcgctcgctgaggaacttc 441 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgctactcga 587 ||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||| Sbjct: 442 gtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgctgctcga 494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| |||||| |||||| ||||||| | |||||||||||||| Sbjct: 34108441 cccaagaagaagcctcgcacccatggactcaagtcctaccccgtggtcggcacgctgccg 34108500 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 || ||| |||| ||| ||||||| ||||| ||||||| |||||||||||| |||||||| Sbjct: 34108501 catttcatcaataacaaggaccgtttccttgagtggtcgaccggcgtcatgaagcgcagc 34108560 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||||||||| || | ||||||| | |||| ||||||||||||| |||||||||| || Sbjct: 34108561 cccacgcacaccatgtcgttcaaggagctcggactcaccggcggcgtcatcaccgccaac 34108620 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 34108621 ccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaagggcgagctt 34108680 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || ||| ||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 34108681 gccgtgtccttgctcgaggattttcttggccacggcatcttcaattccgacggcgaacag 34108740 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34108741 tggctatggcagcggaaggccgccagttacgagttcaacaagcgctcgctgaggaacttc 34108800 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgctactcga 587 ||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||| Sbjct: 34108801 gtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgctgctcga 34108853 Score = 353 bits (178), Expect = 4e-94 Identities = 352/410 (85%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || ||||||| ||| Sbjct: 34078096 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcacactg 34078155 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgc 291 |||||||||| ||||||| |||| |||||||| |||| |||| ||||| |||| Sbjct: 34078156 ccgcacttcgccaagaacaaggatcgcttccttgagtttataaccgaaatcatgaagcgg 34078215 Query: 292 agccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgcc 351 ||||||||||||||| || | ||||||| | |||||||||||||||||| |||||||||| Sbjct: 34078216 agccccacgcacaccttgtcgttcaaggcgctcggcctcaccggcggcgtcatcaccgcc 34078275 Query: 352 gacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgag 411 ||||||| |||||| | | || ||| ||||||||| || ||||||||||||||| Sbjct: 34078276 aacccggccaatgtcgagtatacgctgaagactaactttggtaactaccccaagggcgag 34078335 Query: 412 ctctcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaa 471 ||| | || |||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 34078336 ctcgccgtgtccatgctcgtcgacttcctcggccatggcatcttcaactccgacggcgag 34078395 Query: 472 cagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaac 531 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 34078396 cagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaac 34078455 Query: 532 ttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 |||||||| ||| ||||| | | ||||||||||||| ||||||||||||| Sbjct: 34078456 ttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgct 34078505 Score = 335 bits (169), Expect = 1e-88 Identities = 343/401 (85%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| ||||| |||||| |||||| | |||||||||||||| Sbjct: 34087960 cccaagaagaagcctcgcattcatggactcaagtcctaccctgtggtcggcacgctgccg 34088019 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 ||| || |||||||| || |||| ||||| |||||| ||| || ||||| || ||||| Sbjct: 34088020 cacatcatcaagaacaagcaccggttccttaagtggtcgaccagcatcatgaagtgcagc 34088079 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||| ||||| || | | ||||| | ||||||||||||| |||| |||||||||| || Sbjct: 34088080 cccacgaacaccatgtcgtacaaggcgctcggcctcaccggtggcgtcatcaccgccaac 34088139 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||| ||||||||| || |||||||||||| ||||| Sbjct: 34088140 ccggccaacgtcgagcacattctcaagactaactttgacaactaccccaagggcaagctc 34088199 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || |||||||||||||| || || ||||||||||||||||| ||||||||||| ||| Sbjct: 34088200 accgtgtccatgctcgaggactttcttggccacggcatcttcaattccgacggcgagcag 34088259 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34088260 tggctatggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 34088319 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgct 575 ||||||||| ||||||| |||||| ||||| || ||||||| Sbjct: 34088320 gtggtcgacaccgtccggttcgagatcgtcaagaggctgct 34088360 Score = 319 bits (161), Expect = 6e-84 Identities = 311/361 (86%) Strand = Plus / Plus Query: 221 tcggcacgctgccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcg 280 ||||||||||||||||||||| ||||||| | || | || |||||||||| |||| || Sbjct: 34082937 tcggcacgctgccgcacttcgccaagaacaggcacaggtttctcgagtggtcgaccgacg 34082996 Query: 281 tcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcg 340 | ||| |||||||||||||||||||| || | ||||||| | | |||||||| ||||||| Sbjct: 34082997 taatgaagcgcagccccacgcacaccatgacgttcaaggcgcttggcctcacaggcggcg 34083056 Query: 341 ccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattacc 400 |||||| ||| || ||| ||||||||||||||| ||| |||||||| || |||| Sbjct: 34083057 tcatcacagccaacgtggccaacgtcgagcacatactaaagactaactttagtaactacc 34083116 Query: 401 ccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaact 460 | || ||||||||||| || ||| |||||||||| || || ||||||||||||||||||| Sbjct: 34083117 cgaaaggcgagctctccgtgtccttgctcgaggacttgcttggccacggcatcttcaact 34083176 Query: 461 ccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgct 520 |||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||| Sbjct: 34083177 ccgacggcgagcagtggctgtggcagcggaaggccgcaagctacgagttcaaccagcgct 34083236 Query: 521 cgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgc 580 ||||||||| ||||||||| ||| ||||||| ||||||||||||||| |||||||||||| Sbjct: 34083237 cgctgaggagcttcgtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgc 34083296 Query: 581 t 581 | Sbjct: 34083297 t 34083297 Score = 270 bits (136), Expect = 5e-69 Identities = 347/414 (83%), Gaps = 5/414 (1%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || |||||| || Sbjct: 34068167 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcatagtg 34068226 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtaca-ccggcgtcatgcagcg 290 ||||||||| ||||||| | ||||||||||| |||| |||| ||| ||||| |||| Sbjct: 34068227 ccgcacttcaccaagaacaacgaccgcttccttgagtt-tacaaccgaaatcatgaagcg 34068285 Query: 291 cagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgcc---atcac 347 ||||||||||| ||| || | ||||||| | || ||||||||||||| | ||||| Sbjct: 34068286 gagccccacgcaaaccatgtcgttcaaggctctaggtctcaccggcggcggcgtcatcac 34068345 Query: 348 cgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaaggg 407 |||| ||||||| |||||| | | || ||| ||||||| | || ||||||||||| Sbjct: 34068346 cgccaacccggccaatgtcgagtatacgctgaagactaacttcggtaactaccccaaggg 34068405 Query: 408 cgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacgg 467 ||||||| | || |||||| ||| ||| ||||||||||| |||||||||||||||||||| Sbjct: 34068406 cgagctcgccgtgtccatggtcgtggacttcctcggccatggcatcttcaactccgacgg 34068465 Query: 468 cgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgag 527 ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 34068466 cgagcagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgag 34068525 Query: 528 gaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 |||||||||||| ||| ||||| | | ||||||||||||| ||||||||||||| Sbjct: 34068526 gaacttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgct 34068579 Score = 230 bits (116), Expect = 4e-57 Identities = 143/152 (94%) Strand = Plus / Plus Query: 430 gaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgc 489 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34125441 gaggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcgg 34125500 Query: 490 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacgccgtc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 34125501 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacaccgtc 34125560 Query: 550 cgcttcgaggtcgtcgagcggctgctgccgct 581 | | |||||||||||| ||||||||||||| Sbjct: 34125561 aggtccgaggtcgtcgataggctgctgccgct 34125592 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 422 ccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgt 481 ||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||| Sbjct: 34093033 ccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtggctgt 34093092 Query: 482 ggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcg 541 |||| || |||||| ||||||||||||||| ||||||| ||||||||||||||||||| | Sbjct: 34093093 ggcaacggaaggccaccagctacgagttcagcaagcgcacgctgaggaacttcgtggtgg 34093152 Query: 542 acgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 || |||| | ||||||||| ||||| |||| |||||||| Sbjct: 34093153 acaccgttcagttcgaggtcatcgagaggcttctgccgct 34093192 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 171 ggaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgct 230 ||||||||||||||||||||| | |||||| |||||| |||||| || | ||||| || Sbjct: 34092782 ggaccccaagaagcagcctcgtgcccatggactcaagtcctaccctgtcgttggcactct 34092841 Query: 231 gccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcg 290 |||||||||| ||||| || || | | | |||||||||||| |||||||| | |||| Sbjct: 34092842 gccgcacttcatcaagcacaagaatcacatcctcgagtggtcggccggcgtcctaaagcg 34092901 Query: 291 cagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgc 350 |||||||| ||||||| || | ||||||| | | |||||||||||||||| | | || || Sbjct: 34092902 cagccccatgcacaccatgtcgttcaaggcgcttggcctcaccggcggcgtctttacggc 34092961 Query: 351 cgacccggcatgcgtcgagcacatactcaaggctaactttg 391 | ||||||| |||||| ||||| |||||| ||||||||| Sbjct: 34092962 caacccggccaacgtcgaacacatgctcaagactaactttg 34093002 Score = 109 bits (55), Expect = 1e-20 Identities = 153/186 (82%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 180 gaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccgcactt 239 |||||||||||||| | | |||||||||| |||||| ||| |||||| ||||| ||||| Sbjct: 34125185 gaagcagcctcgcgccgacggcctcaaggcctacccgatcgtcggcatactgccacactt 34125244 Query: 240 cgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagccccac 299 ||||| ||||||| ||||| |||||||||||| |||||||| || |||| ||||||| Sbjct: 34125245 cgtcaggaaccagcaccgcctcctcgagtggtcggccggcgtcgtggcgcgctgccccac 34125304 Query: 300 gcacaccctggc------cttcaaggtgttcggcctcaccggcggcgccatcaccgccga 353 ||||||| || | |||||||| |||||||||| || |||||||||||||| | | Sbjct: 34125305 gcacaccatgtccttcaacttcaagggcttcggcctcatcgccggcgccatcaccggcaa 34125364 Query: 354 cccggc 359 |||||| Sbjct: 34125365 cccggc 34125370 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||||| ||||||||||||||||||||||| Sbjct: 36833832 tcctcggccagggcatcttcaactccgacggcga 36833865 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 35186233 ctcggcgacggcatcttcaactccgacggcga 35186202 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 tcggcacgctgccgcacttcgtcaagaa 248 ||||||||||||| ||||| |||||||| Sbjct: 31163520 tcggcacgctgccacacttggtcaagaa 31163493 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 4420740 cggcatcttcaacgccgacggcga 4420763
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| |||||| |||||| ||||||| | |||||||||||||| Sbjct: 104919 cccaagaagaagcctcgcacccatggactcaagtcctaccccgtggtcggcacgctgccg 104978 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 || ||| |||| ||| ||||||| ||||| ||||||| |||||||||||| |||||||| Sbjct: 104979 catttcatcaataacaaggaccgtttccttgagtggtcgaccggcgtcatgaagcgcagc 105038 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||||||||| || | ||||||| | |||| ||||||||||||| |||||||||| || Sbjct: 105039 cccacgcacaccatgtcgttcaaggagctcggactcaccggcggcgtcatcaccgccaac 105098 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 105099 ccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaagggcgagctt 105158 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || ||| ||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 105159 gccgtgtccttgctcgaggattttcttggccacggcatcttcaattccgacggcgaacag 105218 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105219 tggctatggcagcggaaggccgccagttacgagttcaacaagcgctcgctgaggaacttc 105278 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgctactcga 587 ||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||| Sbjct: 105279 gtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgctgctcga 105331 Score = 353 bits (178), Expect = 4e-94 Identities = 352/410 (85%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || ||||||| ||| Sbjct: 74574 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcacactg 74633 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgc 291 |||||||||| ||||||| |||| |||||||| |||| |||| ||||| |||| Sbjct: 74634 ccgcacttcgccaagaacaaggatcgcttccttgagtttataaccgaaatcatgaagcgg 74693 Query: 292 agccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgcc 351 ||||||||||||||| || | ||||||| | |||||||||||||||||| |||||||||| Sbjct: 74694 agccccacgcacaccttgtcgttcaaggcgctcggcctcaccggcggcgtcatcaccgcc 74753 Query: 352 gacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgag 411 ||||||| |||||| | | || ||| ||||||||| || ||||||||||||||| Sbjct: 74754 aacccggccaatgtcgagtatacgctgaagactaactttggtaactaccccaagggcgag 74813 Query: 412 ctctcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaa 471 ||| | || |||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 74814 ctcgccgtgtccatgctcgtcgacttcctcggccatggcatcttcaactccgacggcgag 74873 Query: 472 cagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaac 531 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 74874 cagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaac 74933 Query: 532 ttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 |||||||| ||| ||||| | | ||||||||||||| ||||||||||||| Sbjct: 74934 ttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgct 74983 Score = 335 bits (169), Expect = 1e-88 Identities = 343/401 (85%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| ||||| |||||| |||||| | |||||||||||||| Sbjct: 84438 cccaagaagaagcctcgcattcatggactcaagtcctaccctgtggtcggcacgctgccg 84497 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 ||| || |||||||| || |||| ||||| |||||| ||| || ||||| || ||||| Sbjct: 84498 cacatcatcaagaacaagcaccggttccttaagtggtcgaccagcatcatgaagtgcagc 84557 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||| ||||| || | | ||||| | ||||||||||||| |||| |||||||||| || Sbjct: 84558 cccacgaacaccatgtcgtacaaggcgctcggcctcaccggtggcgtcatcaccgccaac 84617 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||| ||||||||| || |||||||||||| ||||| Sbjct: 84618 ccggccaacgtcgagcacattctcaagactaactttgacaactaccccaagggcaagctc 84677 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || |||||||||||||| || || ||||||||||||||||| ||||||||||| ||| Sbjct: 84678 accgtgtccatgctcgaggactttcttggccacggcatcttcaattccgacggcgagcag 84737 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84738 tggctatggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 84797 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgct 575 ||||||||| ||||||| |||||| ||||| || ||||||| Sbjct: 84798 gtggtcgacaccgtccggttcgagatcgtcaagaggctgct 84838 Score = 319 bits (161), Expect = 6e-84 Identities = 311/361 (86%) Strand = Plus / Plus Query: 221 tcggcacgctgccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcg 280 ||||||||||||||||||||| ||||||| | || | || |||||||||| |||| || Sbjct: 79415 tcggcacgctgccgcacttcgccaagaacaggcacaggtttctcgagtggtcgaccgacg 79474 Query: 281 tcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcg 340 | ||| |||||||||||||||||||| || | ||||||| | | |||||||| ||||||| Sbjct: 79475 taatgaagcgcagccccacgcacaccatgacgttcaaggcgcttggcctcacaggcggcg 79534 Query: 341 ccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattacc 400 |||||| ||| || ||| ||||||||||||||| ||| |||||||| || |||| Sbjct: 79535 tcatcacagccaacgtggccaacgtcgagcacatactaaagactaactttagtaactacc 79594 Query: 401 ccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaact 460 | || ||||||||||| || ||| |||||||||| || || ||||||||||||||||||| Sbjct: 79595 cgaaaggcgagctctccgtgtccttgctcgaggacttgcttggccacggcatcttcaact 79654 Query: 461 ccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgct 520 |||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||| Sbjct: 79655 ccgacggcgagcagtggctgtggcagcggaaggccgcaagctacgagttcaaccagcgct 79714 Query: 521 cgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgc 580 ||||||||| ||||||||| ||| ||||||| ||||||||||||||| |||||||||||| Sbjct: 79715 cgctgaggagcttcgtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgc 79774 Query: 581 t 581 | Sbjct: 79775 t 79775 Score = 270 bits (136), Expect = 5e-69 Identities = 347/414 (83%), Gaps = 5/414 (1%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || |||||| || Sbjct: 64645 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcatagtg 64704 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtaca-ccggcgtcatgcagcg 290 ||||||||| ||||||| | ||||||||||| |||| |||| ||| ||||| |||| Sbjct: 64705 ccgcacttcaccaagaacaacgaccgcttccttgagtt-tacaaccgaaatcatgaagcg 64763 Query: 291 cagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgcc---atcac 347 ||||||||||| ||| || | ||||||| | || ||||||||||||| | ||||| Sbjct: 64764 gagccccacgcaaaccatgtcgttcaaggctctaggtctcaccggcggcggcgtcatcac 64823 Query: 348 cgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaaggg 407 |||| ||||||| |||||| | | || ||| ||||||| | || ||||||||||| Sbjct: 64824 cgccaacccggccaatgtcgagtatacgctgaagactaacttcggtaactaccccaaggg 64883 Query: 408 cgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacgg 467 ||||||| | || |||||| ||| ||| ||||||||||| |||||||||||||||||||| Sbjct: 64884 cgagctcgccgtgtccatggtcgtggacttcctcggccatggcatcttcaactccgacgg 64943 Query: 468 cgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgag 527 ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 64944 cgagcagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgag 65003 Query: 528 gaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 |||||||||||| ||| ||||| | | ||||||||||||| ||||||||||||| Sbjct: 65004 gaacttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgct 65057 Score = 230 bits (116), Expect = 4e-57 Identities = 143/152 (94%) Strand = Plus / Plus Query: 430 gaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgc 489 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121919 gaggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcgg 121978 Query: 490 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacgccgtc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 121979 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacaccgtc 122038 Query: 550 cgcttcgaggtcgtcgagcggctgctgccgct 581 | | |||||||||||| ||||||||||||| Sbjct: 122039 aggtccgaggtcgtcgataggctgctgccgct 122070 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 422 ccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgt 481 ||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||| Sbjct: 89511 ccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtggctgt 89570 Query: 482 ggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcg 541 |||| || |||||| ||||||||||||||| ||||||| ||||||||||||||||||| | Sbjct: 89571 ggcaacggaaggccaccagctacgagttcagcaagcgcacgctgaggaacttcgtggtgg 89630 Query: 542 acgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 || |||| | ||||||||| ||||| |||| |||||||| Sbjct: 89631 acaccgttcagttcgaggtcatcgagaggcttctgccgct 89670 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 171 ggaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgct 230 ||||||||||||||||||||| | |||||| |||||| |||||| || | ||||| || Sbjct: 89260 ggaccccaagaagcagcctcgtgcccatggactcaagtcctaccctgtcgttggcactct 89319 Query: 231 gccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcg 290 |||||||||| ||||| || || | | | |||||||||||| |||||||| | |||| Sbjct: 89320 gccgcacttcatcaagcacaagaatcacatcctcgagtggtcggccggcgtcctaaagcg 89379 Query: 291 cagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgc 350 |||||||| ||||||| || | ||||||| | | |||||||||||||||| | | || || Sbjct: 89380 cagccccatgcacaccatgtcgttcaaggcgcttggcctcaccggcggcgtctttacggc 89439 Query: 351 cgacccggcatgcgtcgagcacatactcaaggctaactttg 391 | ||||||| |||||| ||||| |||||| ||||||||| Sbjct: 89440 caacccggccaacgtcgaacacatgctcaagactaactttg 89480 Score = 109 bits (55), Expect = 1e-20 Identities = 153/186 (82%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 180 gaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccgcactt 239 |||||||||||||| | | |||||||||| |||||| ||| |||||| ||||| ||||| Sbjct: 121663 gaagcagcctcgcgccgacggcctcaaggcctacccgatcgtcggcatactgccacactt 121722 Query: 240 cgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagccccac 299 ||||| ||||||| ||||| |||||||||||| |||||||| || |||| ||||||| Sbjct: 121723 cgtcaggaaccagcaccgcctcctcgagtggtcggccggcgtcgtggcgcgctgccccac 121782 Query: 300 gcacaccctggc------cttcaaggtgttcggcctcaccggcggcgccatcaccgccga 353 ||||||| || | |||||||| |||||||||| || |||||||||||||| | | Sbjct: 121783 gcacaccatgtccttcaacttcaagggcttcggcctcatcgccggcgccatcaccggcaa 121842 Query: 354 cccggc 359 |||||| Sbjct: 121843 cccggc 121848
>dbj|AK070931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B22, full insert sequence Length = 1757 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| |||||| |||||| ||||||| | |||||||||||||| Sbjct: 183 cccaagaagaagcctcgcacccatggactcaagtcctaccccgtggtcggcacgctgccg 242 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 || ||| |||| ||| ||||||| ||||| ||||||| |||||||||||| |||||||| Sbjct: 243 catttcatcaataacaaggaccgtttccttgagtggtcgaccggcgtcatgaagcgcagc 302 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||||||||| || | ||||||| | |||| ||||||||||||| |||||||||| || Sbjct: 303 cccacgcacaccatgtcgttcaaggagctcggactcaccggcggcgtcatcaccgccaac 362 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 363 ccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaagggcgagctt 422 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || ||| ||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 423 gccgtgtccttgctcgaggattttcttggccacggcatcttcaattccgacggcgaacag 482 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 tggctatggcagcggaaggccgccagttacgagttcaacaagcgctcgctgaggaacttc 542 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgctactcga 587 ||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||| Sbjct: 543 gtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgctgctcga 595
>ref|NM_190966.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 353 bits (178), Expect = 4e-94 Identities = 352/410 (85%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || ||||||| ||| Sbjct: 82 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcacactg 141 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgc 291 |||||||||| ||||||| |||| |||||||| |||| |||| ||||| |||| Sbjct: 142 ccgcacttcgccaagaacaaggatcgcttccttgagtttataaccgaaatcatgaagcgg 201 Query: 292 agccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgcc 351 ||||||||||||||| || | ||||||| | |||||||||||||||||| |||||||||| Sbjct: 202 agccccacgcacaccttgtcgttcaaggcgctcggcctcaccggcggcgtcatcaccgcc 261 Query: 352 gacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgag 411 ||||||| |||||| | | || ||| ||||||||| || ||||||||||||||| Sbjct: 262 aacccggccaatgtcgagtatacgctgaagactaactttggtaactaccccaagggcgag 321 Query: 412 ctctcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaa 471 ||| | || |||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 322 ctcgccgtgtccatgctcgtcgacttcctcggccatggcatcttcaactccgacggcgag 381 Query: 472 cagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaac 531 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaac 441 Query: 532 ttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 |||||||| ||| ||||| | | ||||||||||||| ||||||||||||| Sbjct: 442 ttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgct 491
>ref|NM_190969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 335 bits (169), Expect = 1e-88 Identities = 343/401 (85%) Strand = Plus / Plus Query: 175 cccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccg 234 ||||||||| |||||||| ||||| |||||| |||||| | |||||||||||||| Sbjct: 94 cccaagaagaagcctcgcattcatggactcaagtcctaccctgtggtcggcacgctgccg 153 Query: 235 cacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagc 294 ||| || |||||||| || |||| ||||| |||||| ||| || ||||| || ||||| Sbjct: 154 cacatcatcaagaacaagcaccggttccttaagtggtcgaccagcatcatgaagtgcagc 213 Query: 295 cccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgccgac 354 |||||| ||||| || | | ||||| | ||||||||||||| |||| |||||||||| || Sbjct: 214 cccacgaacaccatgtcgtacaaggcgctcggcctcaccggtggcgtcatcaccgccaac 273 Query: 355 ccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgagctc 414 ||||| |||||||||||| |||||| ||||||||| || |||||||||||| ||||| Sbjct: 274 ccggccaacgtcgagcacattctcaagactaactttgacaactaccccaagggcaagctc 333 Query: 415 tcggtctccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacag 474 | || |||||||||||||| || || ||||||||||||||||| ||||||||||| ||| Sbjct: 334 accgtgtccatgctcgaggactttcttggccacggcatcttcaattccgacggcgagcag 393 Query: 475 tggctgtggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 534 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 tggctatggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttc 453 Query: 535 gtggtcgacgccgtccgcttcgaggtcgtcgagcggctgct 575 ||||||||| ||||||| |||||| ||||| || ||||||| Sbjct: 454 gtggtcgacaccgtccggttcgagatcgtcaagaggctgct 494
>ref|NM_190967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 319 bits (161), Expect = 6e-84 Identities = 311/361 (86%) Strand = Plus / Plus Query: 221 tcggcacgctgccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcg 280 ||||||||||||||||||||| ||||||| | || | || |||||||||| |||| || Sbjct: 137 tcggcacgctgccgcacttcgccaagaacaggcacaggtttctcgagtggtcgaccgacg 196 Query: 281 tcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcg 340 | ||| |||||||||||||||||||| || | ||||||| | | |||||||| ||||||| Sbjct: 197 taatgaagcgcagccccacgcacaccatgacgttcaaggcgcttggcctcacaggcggcg 256 Query: 341 ccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattacc 400 |||||| ||| || ||| ||||||||||||||| ||| |||||||| || |||| Sbjct: 257 tcatcacagccaacgtggccaacgtcgagcacatactaaagactaactttagtaactacc 316 Query: 401 ccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaact 460 | || ||||||||||| || ||| |||||||||| || || ||||||||||||||||||| Sbjct: 317 cgaaaggcgagctctccgtgtccttgctcgaggacttgcttggccacggcatcttcaact 376 Query: 461 ccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgct 520 |||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||| Sbjct: 377 ccgacggcgagcagtggctgtggcagcggaaggccgcaagctacgagttcaaccagcgct 436 Query: 521 cgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccgc 580 ||||||||| ||||||||| ||| ||||||| ||||||||||||||| |||||||||||| Sbjct: 437 cgctgaggagcttcgtggtggacaccgtccggttcgaggtcgtcgagaggctgctgccgc 496 Query: 581 t 581 | Sbjct: 497 t 497
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 280 gtcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggc 339 |||||| |||| ||||||||||||||| || | ||||||| | ||||||||||||||||| Sbjct: 103699 gtcatgaagcggagccccacgcacaccatgtcgttcaaggcgctcggcctcaccggcggc 103758 Query: 340 gccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattac 399 | |||||||||| ||||||| |||||| | | || ||| ||||||| | || ||| Sbjct: 103759 gtcatcaccgccaacccggccaatgtcgagtatacgctaaagactaacttcggtaactac 103818 Query: 400 cccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaac 459 ||||||||||||||| | || |||||||||| ||| ||||||||||| |||||||||||| Sbjct: 103819 cccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatcttcaac 103878 Query: 460 tccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgc 519 ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 103879 tccgacggcgagcagtggctgtggcagcagaaggccgccagctacaagttcaacaagcgc 103938 Query: 520 tcgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccg 579 ||| |||||||||| ||||||||| ||||| | ||||||||||||||| ||||||||||| Sbjct: 103939 tcgttgaggaactttgtggtcgacaccgtcaggttcgaggtcgtcgagaggctgctgccg 103998 Query: 580 ct 581 || Sbjct: 103999 ct 104000
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Minus Query: 280 gtcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggc 339 |||||| |||| ||||||||||||||| || | ||||||| | ||||||||||||||||| Sbjct: 18891342 gtcatgaagcggagccccacgcacaccatgtcgttcaaggcgctcggcctcaccggcggc 18891283 Query: 340 gccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattac 399 | |||||||||| ||||||| |||||| | | || ||| ||||||| | || ||| Sbjct: 18891282 gtcatcaccgccaacccggccaatgtcgagtatacgctaaagactaacttcggtaactac 18891223 Query: 400 cccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaac 459 ||||||||||||||| | || |||||||||| ||| ||||||||||| |||||||||||| Sbjct: 18891222 cccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatcttcaac 18891163 Query: 460 tccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgc 519 ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 18891162 tccgacggcgagcagtggctgtggcagcagaaggccgccagctacaagttcaacaagcgc 18891103 Query: 520 tcgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccg 579 ||| |||||||||| ||||||||| ||||| | ||||||||||||||| ||||||||||| Sbjct: 18891102 tcgttgaggaactttgtggtcgacaccgtcaggttcgaggtcgtcgagaggctgctgccg 18891043 Query: 580 ct 581 || Sbjct: 18891042 ct 18891041
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Minus Query: 280 gtcatgcagcgcagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggc 339 |||||| |||| ||||||||||||||| || | ||||||| | ||||||||||||||||| Sbjct: 18902596 gtcatgaagcggagccccacgcacaccatgtcgttcaaggcgctcggcctcaccggcggc 18902537 Query: 340 gccatcaccgccgacccggcatgcgtcgagcacatactcaaggctaactttgcgaattac 399 | |||||||||| ||||||| |||||| | | || ||| ||||||| | || ||| Sbjct: 18902536 gtcatcaccgccaacccggccaatgtcgagtatacgctaaagactaacttcggtaactac 18902477 Query: 400 cccaagggcgagctctcggtctccatgctcgaggatttcctcggccacggcatcttcaac 459 ||||||||||||||| | || |||||||||| ||| ||||||||||| |||||||||||| Sbjct: 18902476 cccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatcttcaac 18902417 Query: 460 tccgacggcgaacagtggctgtggcagcgcaaggccgccagctacgagttcaacaagcgc 519 ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 18902416 tccgacggcgagcagtggctgtggcagcagaaggccgccagctacaagttcaacaagcgc 18902357 Query: 520 tcgctgaggaacttcgtggtcgacgccgtccgcttcgaggtcgtcgagcggctgctgccg 579 ||| |||||||||| ||||||||| ||||| | ||||||||||||||| ||||||||||| Sbjct: 18902356 tcgttgaggaactttgtggtcgacaccgtcaggttcgaggtcgtcgagaggctgctgccg 18902297 Query: 580 ct 581 || Sbjct: 18902296 ct 18902295
>dbj|AK102714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105A13, full insert sequence Length = 1564 Score = 230 bits (116), Expect = 4e-57 Identities = 143/152 (94%) Strand = Plus / Plus Query: 430 gaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgc 489 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 299 gaggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcgg 358 Query: 490 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacgccgtc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 359 aaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacaccgtc 418 Query: 550 cgcttcgaggtcgtcgagcggctgctgccgct 581 | | |||||||||||| ||||||||||||| Sbjct: 419 aggtccgaggtcgtcgataggctgctgccgct 450 Score = 109 bits (55), Expect = 1e-20 Identities = 153/186 (82%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 180 gaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctgccgcactt 239 |||||||||||||| | | |||||||||| |||||| ||| |||||| ||||| ||||| Sbjct: 43 gaagcagcctcgcgccgacggcctcaaggcctacccgatcgtcggcatactgccacactt 102 Query: 240 cgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgcagccccac 299 ||||| ||||||| ||||| |||||||||||| |||||||| || |||| ||||||| Sbjct: 103 cgtcaggaaccagcaccgcctcctcgagtggtcggccggcgtcgtggcgcgctgccccac 162 Query: 300 gcacaccctggc------cttcaaggtgttcggcctcaccggcggcgccatcaccgccga 353 ||||||| || | |||||||| |||||||||| || |||||||||||||| | | Sbjct: 163 gcacaccatgtccttcaacttcaagggcttcggcctcatcgccggcgccatcaccggcaa 222 Query: 354 cccggc 359 |||||| Sbjct: 223 cccggc 228
>ref|NM_197264.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450-dependent fatty acid hydroxylase (OSJNBb0015K05.16), mRNA Length = 723 Score = 224 bits (113), Expect = 3e-55 Identities = 206/237 (86%) Strand = Plus / Plus Query: 313 ttcaaggtgttcggcctcaccggcggcgccatcaccgccgacccggcatgcgtcgagcac 372 ||||||| | |||||||||||||||||| |||||||||| ||||||| |||||| | Sbjct: 7 ttcaaggcgctcggcctcaccggcggcgtcatcaccgccaacccggccaatgtcgagtat 66 Query: 373 atactcaaggctaactttgcgaattaccccaagggcgagctctcggtctccatgctcgag 432 | || ||| ||||||| | || |||||||||||||||||| | || |||||||||| | Sbjct: 67 acgctaaagactaacttcggtaactaccccaagggcgagctcgccgtgtccatgctcgtg 126 Query: 433 gatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaag 492 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 127 gacttcctcggccatggcatcttcaactccgacggcgagcagtggctgtggcagcagaag 186 Query: 493 gccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacgccgtc 549 |||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||| Sbjct: 187 gccgccagctacaagttcaacaagcgctcgttgaggaactttgtggtcgacaccgtc 243
>ref|NM_190970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 422 ccatgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgt 481 ||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||| Sbjct: 332 ccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtggctgt 391 Query: 482 ggcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcg 541 |||| || |||||| ||||||||||||||| ||||||| ||||||||||||||||||| | Sbjct: 392 ggcaacggaaggccaccagctacgagttcagcaagcgcacgctgaggaacttcgtggtgg 451 Query: 542 acgccgtccgcttcgaggtcgtcgagcggctgctgccgct 581 || |||| | ||||||||| ||||| |||| |||||||| Sbjct: 452 acaccgttcagttcgaggtcatcgagaggcttctgccgct 491 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 171 ggaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgct 230 ||||||||||||||||||||| | |||||| |||||| |||||| || | ||||| || Sbjct: 81 ggaccccaagaagcagcctcgtgcccatggactcaagtcctaccctgtcgttggcactct 140 Query: 231 gccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcg 290 |||||||||| ||||| || || | | | |||||||||||| |||||||| | |||| Sbjct: 141 gccgcacttcatcaagcacaagaatcacatcctcgagtggtcggccggcgtcctaaagcg 200 Query: 291 cagccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgc 350 |||||||| ||||||| || | ||||||| | | |||||||||||||||| | | || || Sbjct: 201 cagccccatgcacaccatgtcgttcaaggcgcttggcctcaccggcggcgtctttacggc 260 Query: 351 cgacccggcatgcgtcgagcacatactcaaggctaactttg 391 | ||||||| |||||| ||||| |||||| ||||||||| Sbjct: 261 caacccggccaacgtcgaacacatgctcaagactaactttg 301
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| || Sbjct: 7250 catgctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctg 7191 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcga 542 |||||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||| Sbjct: 7190 gcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcga 7131 Query: 543 cg 544 || Sbjct: 7130 cg 7129
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| || Sbjct: 1789420 catgctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctg 1789361 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcga 542 |||||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||| Sbjct: 1789360 gcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcga 1789301 Query: 543 cg 544 || Sbjct: 1789300 cg 1789299 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 1768647 catgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctg 1768706 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||| ||||| Sbjct: 1768707 gcagcgcaagaacgccagctacgagttcagcaaccgctc 1768745 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggc 468 |||||||| |||||||||||||| ||||||| Sbjct: 2374706 tcctcggcgacggcatcttcaacgtcgacggc 2374675
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| || Sbjct: 1787141 catgctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctg 1787082 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcga 542 |||||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||| Sbjct: 1787081 gcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcga 1787022 Query: 543 cg 544 || Sbjct: 1787021 cg 1787020 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 1766368 catgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctg 1766427 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||| ||||| Sbjct: 1766428 gcagcgcaagaacgccagctacgagttcagcaaccgctc 1766466 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggc 468 |||||||| |||||||||||||| ||||||| Sbjct: 2382488 tcctcggcgacggcatcttcaacgtcgacggc 2382457
>dbj|AK064306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B08, full insert sequence Length = 1532 Score = 145 bits (73), Expect = 2e-31 Identities = 199/241 (82%) Strand = Plus / Plus Query: 172 gaccccaagaagcagcctcgcggccatggcctcaaggtctaccccatcctcggcacgctg 231 ||||||||||||||||||| || |||||| |||||| ||||||| || ||||||| ||| Sbjct: 155 gaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcacactg 214 Query: 232 ccgcacttcgtcaagaaccaggaccgcttcctcgagtggtacaccggcgtcatgcagcgc 291 |||||||||| ||||||| |||| |||||||| |||| |||| ||||| |||| Sbjct: 215 ccgcacttcgccaagaacaaggatcgcttccttgagtttataaccgaaatcatgaagcgg 274 Query: 292 agccccacgcacaccctggccttcaaggtgttcggcctcaccggcggcgccatcaccgcc 351 ||||||||||||||| || | ||||||| | |||||||||||||||||| |||||||||| Sbjct: 275 agccccacgcacaccttgtcgttcaaggcgctcggcctcaccggcggcgtcatcaccgcc 334 Query: 352 gacccggcatgcgtcgagcacatactcaaggctaactttgcgaattaccccaagggcgag 411 ||||||| |||||| | | || ||| ||||||||| || ||||||||||||||| Sbjct: 335 aacccggccaatgtcgagtatacgctgaagactaactttggtaactaccccaagggcgag 394 Query: 412 c 412 | Sbjct: 395 c 395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 426 gctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggca 485 ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1724949 gctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctggca 1724890 Query: 486 gcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacg 544 ||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||||| Sbjct: 1724889 gcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcgacg 1724831 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| |||||||| || ||| ||||||||||||||||||| |||||||| || Sbjct: 1715540 catgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctg 1715599 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||||||||| Sbjct: 1715600 gcagcgcaagaacgccagctacgagttcagcaagcgctc 1715638 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||| ||||||||||||||||||||| Sbjct: 6384397 ctcggcgacgacatcttcaactccgacggcga 6384428 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||| |||||||||||||| ||||||||| Sbjct: 2468290 tcctcggcgacggcatcttcaacgtcgacggcga 2468257 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 14911698 cggcatcttcaacgccgacggcga 14911675
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 426 gctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggca 485 ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1724925 gctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctggca 1724866 Query: 486 gcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacg 544 ||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||||| Sbjct: 1724865 gcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcgacg 1724807 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| |||||||| || ||| ||||||||||||||||||| |||||||| || Sbjct: 1715516 catgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctg 1715575 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||||||||| Sbjct: 1715576 gcagcgcaagaacgccagctacgagttcagcaagcgctc 1715614 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||| ||||||||||||||||||||| Sbjct: 6384272 ctcggcgacgacatcttcaactccgacggcga 6384303 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||| |||||||||||||| ||||||||| Sbjct: 2468234 tcctcggcgacggcatcttcaacgtcgacggcga 2468201 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 14865981 cggcatcttcaacgccgacggcga 14865958
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 426 gctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggca 485 ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 115535 gctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctggca 115594 Query: 486 gcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacg 544 ||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||||| Sbjct: 115595 gcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcgacg 115653 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| |||||||| || ||| ||||||||||||||||||| |||||||| || Sbjct: 124944 catgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctg 124885 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||||||||| Sbjct: 124884 gcagcgcaagaacgccagctacgagttcagcaagcgctc 124846
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 426 gctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggca 485 ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 41972 gctcgaggatttcctcggccatggcctcttcaactccgacggcgagcagtggctctggca 42031 Query: 486 gcgcaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtcgacg 544 ||||||| ||||||||||||||||| ||||||||| ||| | || ||||| ||||||| Sbjct: 42032 gcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaagttcgtcgtcgacg 42090 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| |||||||| || ||| ||||||||||||||||||| |||||||| || Sbjct: 51381 catgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctg 51322 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||||||||| Sbjct: 51321 gcagcgcaagaacgccagctacgagttcagcaagcgctc 51283
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 132818 catgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctg 132877 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||| ||||| Sbjct: 132878 gcagcgcaagaacgccagctacgagttcagcaaccgctc 132916
>dbj|AK103307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125E14, full insert sequence Length = 1928 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 423 catgctcgaggatttcctcggccacggcatcttcaactccgacggcgaacagtggctgtg 482 |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 418 catgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctg 477 Query: 483 gcagcgcaaggccgccagctacgagttcaacaagcgctc 521 |||||||||| ||||||||||||||||| ||| ||||| Sbjct: 478 gcagcgcaagaacgccagctacgagttcagcaaccgctc 516
>ref|NM_187695.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 349 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 408 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 409 gcgagctacgagttcaacacgcggtcgct 437
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 6413334 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 6413275 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 6413274 gcgagctacgagttcaacacgcggtcgct 6413246 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcg 488 |||||||| ||||||||||||| |||||||||| | ||||| | ||||||| Sbjct: 2205517 tcctcggcggcggcatcttcaacaccgacggcgagcggtggcggcggcagcg 2205568 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaa 471 |||||||| |||||||||||| | ||||||||||| Sbjct: 2181926 tcctcggcgacggcatcttcagcgccgacggcgaa 2181960 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| ||| |||||||||||||| |||||||||| Sbjct: 2193951 tccttggcaacggcatcttcaacgccgacggcga 2193984
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 93460 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 93401 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 93400 gcgagctacgagttcaacacgcggtcgct 93372
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 6412547 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 6412488 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 6412487 gcgagctacgagttcaacacgcggtcgct 6412459 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcg 488 |||||||| ||||||||||||| |||||||||| | ||||| | ||||||| Sbjct: 2205529 tcctcggcggcggcatcttcaacaccgacggcgagcggtggcggcggcagcg 2205580 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaa 471 |||||||| |||||||||||| | ||||||||||| Sbjct: 2181938 tcctcggcgacggcatcttcagcgccgacggcgaa 2181972 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| ||| |||||||||||||| |||||||||| Sbjct: 2193963 tccttggcaacggcatcttcaacgccgacggcga 2193996
>dbj|AK109504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D01, full insert sequence Length = 2009 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 409 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 468 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 469 gcgagctacgagttcaacacgcggtcgct 497
>dbj|AK105985.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G07, full insert sequence Length = 1672 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 391 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 450 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 451 gcgagctacgagttcaacacgcggtcgct 479
>dbj|AK062585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E07, full insert sequence Length = 1710 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcgcaaggcc 495 |||||||| | ||||||||||||| | |||||||| ||||| || |||||||||||| Sbjct: 409 ttcctcgggcgcggcatcttcaacgctgacggcgaggcgtggcggtcgcagcgcaaggcg 468 Query: 496 gccagctacgagttcaacaagcgctcgct 524 || |||||||||||||||| ||| ||||| Sbjct: 469 gcgagctacgagttcaacacgcggtcgct 497
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||||| ||||||||||||||||||||||| Sbjct: 49410 tcctcggccagggcatcttcaactccgacggcga 49443
>dbj|AK109676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C01, full insert sequence Length = 2038 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||||| ||||||||||||||||||||||| Sbjct: 497 tcctcggccagggcatcttcaactccgacggcga 530
>ref|NM_190387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 770 ctcggcgacggcatcttcaactccgacggcga 739
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 27083251 ctcggcgacggcatcttcaactccgacggcga 27083220
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 65317 ctcggcgacggcatcttcaactccgacggcga 65286
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 54900 ctcggcgacggcatcttcaactccgacggcga 54869
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 136453 ctcggcgacggcatcttcaactccgacggcga 136422
>dbj|AK108946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B12, full insert sequence Length = 1667 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 262 ctcggcgacggcatcttcaactccgacggcga 231
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||||||||||||||| Sbjct: 477 ctcggcgacggcatcttcaactccgacggcga 508
>ref|XM_473482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||||||||||||||||||||| Sbjct: 341 tcctcggcgacggcatcttcaactccgacgg 371
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||||||||||||||||||||| Sbjct: 43501 tcctcggcgacggcatcttcaactccgacgg 43471
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||||||||||||||||||||| Sbjct: 28036275 tcctcggcgacggcatcttcaactccgacgg 28036245 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||| ||||||||||||||||| Sbjct: 22384969 tcctcggcaacgggatcttcaactccgacgg 22384999
>dbj|AK106001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H12, full insert sequence Length = 2095 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||||||||||||||||||||| Sbjct: 639 tcctcggcgacggcatcttcaactccgacgg 669
>gb|DQ340240.1| Glycine max cytochrome P450 monooxygenase CYP86A (CYP86A) mRNA, complete cds Length = 2056 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 433 gatttcctcggccacggcatcttcaactccgacggcga 470 ||||| |||||| | ||||||||||||||||||||||| Sbjct: 545 gatttgctcggcgaaggcatcttcaactccgacggcga 582
>ref|NM_116260.2| Arabidopsis thaliana CYP86A2; oxygen binding AT4G00360 (CYP86A2) mRNA, complete cds Length = 2069 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 523 ttcctcggccaaggtatcttcaactccgacgg 554
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcg 488 |||||||| ||||||||||||| |||||||||| | ||||| | ||||||| Sbjct: 95811 tcctcggcggcggcatcttcaacaccgacggcgagcggtggcggcggcagcg 95862 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaa 471 |||||||| |||||||||||| | ||||||||||| Sbjct: 72220 tcctcggcgacggcatcttcagcgccgacggcgaa 72254 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| ||| |||||||||||||| |||||||||| Sbjct: 84245 tccttggcaacggcatcttcaacgccgacggcga 84278
>emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 1 Length = 197119 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 160290 ttcctcggccaaggtatcttcaactccgacgg 160321
>gb|AY133539.1| Arabidopsis thaliana At4g00360/A_IG005I10_21 mRNA, complete cds Length = 1662 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 340 ttcctcggccaaggtatcttcaactccgacgg 371
>gb|AY074851.1| Arabidopsis thaliana AT4g00360/A_IG005I10_21 mRNA, complete cds Length = 1892 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 425 ttcctcggccaaggtatcttcaactccgacgg 456
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcg 488 |||||||| ||||||||||||| |||||||||| | ||||| | ||||||| Sbjct: 120539 tcctcggcggcggcatcttcaacaccgacggcgagcggtggcggcggcagcg 120488 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| ||| |||||||||||||| |||||||||| Sbjct: 132105 tccttggcaacggcatcttcaacgccgacggcga 132072
>emb|BX827611.1|CNS0A49X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1894 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 406 ttcctcggccaaggtatcttcaactccgacgg 437
>gb|AF123609.1|AF123609 Triticum aestivum clone CYP86-TA cytochrome P450 mRNA, complete cds Length = 2181 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||||||||||||| ||||||||||| Sbjct: 454 ctcggcgacggcatcttcaattccgacggcga 485
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggcgaacagtggctgtggcagcg 488 |||||||| ||||||||||||| |||||||||| | ||||| | ||||||| Sbjct: 1298 tcctcggcggcggcatcttcaacaccgacggcgagcggtggcggcggcagcg 1247
>gb|AF195115.1|F5I10 Arabidopsis thaliana BAC F5I10 Length = 111906 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 60809 ttcctcggccaaggtatcttcaactccgacgg 60840
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 439 ctcggccacggcatcttcaactccgacggcga 470 |||||| ||| ||||||||||||||||||||| Sbjct: 45945 ctcggcgacgacatcttcaactccgacggcga 45976
>gb|AF013293.1|IG005I10 Arabidopsis thaliana BAC IG005I10 Length = 111906 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 436 ttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| || ||||||||||||||||| Sbjct: 51098 ttcctcggccaaggtatcttcaactccgacgg 51067
>gb|AY731528.1| Arachis hypogaea clone PM708 microsatellite sequence Length = 404 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 436 ttcctcggccacggcatcttcaactccgacggcga 470 |||||||| || || |||||||||||||||||||| Sbjct: 72 ttcctcggtcaaggaatcttcaactccgacggcga 38
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 555 cgaggtcgtcgagcggctgctgccgct 581 |||||||| |||||||||||||||||| Sbjct: 722538 cgaggtcgccgagcggctgctgccgct 722564
>dbj|AK119195.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C06, full insert sequence Length = 1658 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaa 471 |||||||| |||||||||||| | ||||||||||| Sbjct: 380 tcctcggcgacggcatcttcagcgccgacggcgaa 414
>dbj|AK067844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125N12, full insert sequence Length = 1549 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcgaa 471 |||||||| |||||||||||| | ||||||||||| Sbjct: 243 tcctcggcgacggcatcttcagcgccgacggcgaa 277
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacgg 467 |||||||| |||| ||||||||||||||||| Sbjct: 135873 tcctcggcaacgggatcttcaactccgacgg 135903
>ref|XM_677561.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9384.2), mRNA Length = 1539 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| |||||||||||||||| ||| |||||||| Sbjct: 395 tcctgggccacggcatcttcacctctgacggcga 428
>emb|AJ582817.3| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain ATCC12853 Length = 47050 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 cggcggcgccatcaccgccgacccgg 358 ||||| |||||||||||||||||||| Sbjct: 27660 cggcgccgccatcaccgccgacccgg 27685
>gb|AF366297.1|AF366297 Zea mays cytochrome P450-like protein (ms*-sb200) mRNA, complete cds Length = 1891 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 ||||||| |||||||||||||| |||||||||| Sbjct: 365 tcctcggtgacggcatcttcaacgccgacggcga 398
>dbj|AB164642.1| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, complete cds Length = 25467 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 cggcggcgccatcaccgccgacccgg 358 ||||| |||||||||||||||||||| Sbjct: 10369 cggcgccgccatcaccgccgacccgg 10394
>dbj|AK064287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H01, full insert sequence Length = 1772 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||| |||||||||||||| ||||||||| Sbjct: 461 tcctcggcgacggcatcttcaacgtcgacggcga 494
>gb|AY110418.1| Zea mays CL308_1 mRNA sequence Length = 2559 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||| ||||| || |||||||||||||||||||| Sbjct: 493 tcctgggccaaggtatcttcaactccgacggcga 526
>gb|AY109756.1| Zea mays CL309_1 mRNA sequence Length = 1914 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||| ||||||||||||| |||||||||| Sbjct: 415 tcctcggcggcggcatcttcaacgccgacggcga 448
>emb|AJ628422.2| Streptomyces kanamyceticus partial kanamycin biosynthesis gene cluster, strain DSM 40500 Length = 41576 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 cggcggcgccatcaccgccgacccgg 358 ||||| |||||||||||||||||||| Sbjct: 24433 cggcgccgccatcaccgccgacccgg 24458
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggcga 470 |||||||| |||||||||||||| ||||||||| Sbjct: 75202 tcctcggcgacggcatcttcaacgtcgacggcga 75235
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 cgccatcaccgccgacccggc 359 ||||||||||||||||||||| Sbjct: 3138029 cgccatcaccgccgacccggc 3138009
>ref|NM_115522.2| Arabidopsis thaliana CYP94D2; heme binding / iron ion binding / monooxygenase/ oxygen binding AT3G56630 (CYP94D2) mRNA, complete cds Length = 1629 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 427 ctcgaggatttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| ||||||| ||| || || ||||||||||| Sbjct: 325 ctcgaggattttctcggccgcgggatttttaactccgacgg 365
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ccggcggcgccatcaccgccg 352 ||||||||||||||||||||| Sbjct: 144549 ccggcggcgccatcaccgccg 144569
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ccggcggcgccatcaccgccg 352 ||||||||||||||||||||| Sbjct: 300339 ccggcggcgccatcaccgccg 300359
>gb|DQ394571.1| Glycine max cytochrome P450 monooxygenase CYP94A (CYP94A) mRNA, partial cds Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 acggcatcttcaactccgacggcga 470 |||| |||||||||||||||||||| Sbjct: 368 acggaatcttcaactccgacggcga 392
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 427 ctcgaggatttcctcggccacggcatcttcaactccgacgg 467 ||||||||||| ||||||| ||| || || ||||||||||| Sbjct: 90062 ctcgaggattttctcggccgcgggatttttaactccgacgg 90102
>gb|DQ080039.1| Gluconacetobacter diazotrophicus PAL5 ABC-type Fe3+ transport system periplasmic protein component (feuA), ABC-type Fe3+ transport system permease component (feuB), and ABC-type Fe3+ transport system ATP-binding component (feuC) genes, complete cds Length = 2852 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 accggcggcgccatcaccgcc 351 ||||||||||||||||||||| Sbjct: 1724 accggcggcgccatcaccgcc 1704
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 gcggccatggcctcaaggtct 211 ||||||||||||||||||||| Sbjct: 2425934 gcggccatggcctcaaggtct 2425914
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 555 cgaggtcgtcgagcggctgctgccg 579 |||||||||||| |||||||||||| Sbjct: 4764973 cgaggtcgtcgaccggctgctgccg 4764949 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgccatcaccgccgacccgg 358 |||||||||||||||||||| Sbjct: 1023779 cgccatcaccgccgacccgg 1023760
>gb|AY826150.1| Aedes albopictus clone AL_337 60S ribosomal protein L11 mRNA, complete cds Length = 552 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 gctcgaggatttcctcggcc 445 |||||||||||||||||||| Sbjct: 262 gctcgaggatttcctcggcc 243
>gb|AY293578.1| Haloarcula sp. D1 amino acid ABC transporter ATP-binding protein (abc) gene, partial cds; acetyl-CoA synthetase (ADP-forming) alpha subunit (acdA), acetyl-CoA synthetase (ADP-forming) beta subunit (acdB), 4-hydroxybenzoyl-CoA thioesterase (tie), and gentisate 1,2-dioxygenase (gdo) genes, complete cds; and Leu/Ile/Val-binding protein gene, partial cds Length = 5709 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 gtccgcttcgaggtcgtcga 566 |||||||||||||||||||| Sbjct: 3652 gtccgcttcgaggtcgtcga 3633
>ref|NM_189587.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 423 cggcatcttcaacgccgacggcga 446
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggc 468 |||||||| |||||||||||||| ||||||| Sbjct: 150705 tcctcggcgacggcatcttcaacgtcgacggc 150674
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 tcctcggccacggcatcttcaactccgacggc 468 |||||||| |||||||||||||| ||||||| Sbjct: 26849 tcctcggcgacggcatcttcaacgtcgacggc 26818
>gb|AC150516.2| Bos taurus BAC CH240-117L9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 237116 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gcagccccacgcacaccctg 309 |||||||||||||||||||| Sbjct: 200605 gcagccccacgcacaccctg 200586
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gttcggcctcaccggcggcg 340 |||||||||||||||||||| Sbjct: 1750534 gttcggcctcaccggcggcg 1750515
>ref|XM_422613.1| PREDICTED: Gallus gallus similar to alpha 3 collagen IV (LOC424797), mRNA Length = 4786 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ccctggccttcaaggtgttc 324 |||||||||||||||||||| Sbjct: 1710 ccctggccttcaaggtgttc 1729
>ref|XM_756734.1| Ustilago maydis 521 hypothetical protein (UM05680.1) partial mRNA Length = 2298 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcctcggccacggcatctt 455 |||||||||||||||||||| Sbjct: 351 ttcctcggccacggcatctt 370
>ref|XM_808667.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053511153.40) partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 caccggcggcgccatcaccg 349 |||||||||||||||||||| Sbjct: 977 caccggcggcgccatcaccg 996
>ref|XM_800901.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053509155.39) partial mRNA Length = 1039 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 caccggcggcgccatcaccg 349 |||||||||||||||||||| Sbjct: 983 caccggcggcgccatcaccg 1002
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gccggaccccaagaagcagc 187 |||||||||||||||||||| Sbjct: 6534 gccggaccccaagaagcagc 6515
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gccatcaccgccgacccggc 359 |||||||||||||||||||| Sbjct: 1480910 gccatcaccgccgacccggc 1480929
>emb|X95586.1|HSMB1GENE H.sapiens MB1 gene Length = 6502 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccctggccttcaaggtgt 322 |||||||||||||||||||| Sbjct: 770 caccctggccttcaaggtgt 789
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cggcgccatcaccgccgacc 355 |||||||||||||||||||| Sbjct: 84012 cggcgccatcaccgccgacc 83993
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cggcgccatcaccgccgacc 355 |||||||||||||||||||| Sbjct: 51499 cggcgccatcaccgccgacc 51480
>emb|CR847811.1| Human DNA sequence from clone XX-NCIH2171_5AI03, complete sequence Length = 109177 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccctggccttcaaggtgt 322 |||||||||||||||||||| Sbjct: 60001 caccctggccttcaaggtgt 60020
>emb|CR847576.1| Human DNA sequence from clone XX-NCIH2171_5M12, complete sequence Length = 98856 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccctggccttcaaggtgt 322 |||||||||||||||||||| Sbjct: 63175 caccctggccttcaaggtgt 63194
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 tcggcacgctgccgcacttcgtcaagaa 248 ||||||||||||| ||||| |||||||| Sbjct: 89865 tcggcacgctgccacacttggtcaagaa 89838
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 80822 cggcatcttcaacgccgacggcga 80845
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 cgaggatttcctcggccacggcat 452 ||||||||||||||||||| |||| Sbjct: 823458 cgaggatttcctcggccaccgcat 823481
>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence Length = 184026 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cggcgccatcaccgccgacc 355 |||||||||||||||||||| Sbjct: 7758 cggcgccatcaccgccgacc 7739
>dbj|AK110852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C07, full insert sequence Length = 1788 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 423 cggcatcttcaacgccgacggcga 446
>dbj|AK106404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G11, full insert sequence Length = 1871 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 tcctcggccacggcatcttcaactccgacggc 468 |||||||| |||||||||||||| ||||||| Sbjct: 425 tcctcggcgacggcatcttcaacgtcgacggc 456
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 gtccgcttcgaggtcgtcga 566 |||||||||||||||||||| Sbjct: 1625186 gtccgcttcgaggtcgtcga 1625205
>gb|AY107088.1| Zea mays PCO113177 mRNA sequence Length = 951 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 caagatcgactcactccctc 87 |||||||||||||||||||| Sbjct: 417 caagatcgactcactccctc 436
>emb|AL132780.5|CNS01DTK Human chromosome 14 DNA sequence BAC R-298I3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191946 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccctggccttcaaggtgt 322 |||||||||||||||||||| Sbjct: 138496 caccctggccttcaaggtgt 138477
>dbj|AB077094.1| Allomyces sp. YT-TT1 RPB1 gene for DNA-dependent RNA polymerase II largest subunit, partial cds Length = 1005 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgctgccgcacttcgtcaag 246 |||||||||||||||||||| Sbjct: 909 cgctgccgcacttcgtcaag 928
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cgcttcgaggtcgtcgagcg 569 |||||||||||||||||||| Sbjct: 861941 cgcttcgaggtcgtcgagcg 861960
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 8188 cggcatcttcaacgccgacggcga 8211
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cggcatcttcaactccgacggcga 470 ||||||||||||| |||||||||| Sbjct: 170149 cggcatcttcaacgccgacggcga 170172
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ctcaaggtctaccccatcct 221 |||||||||||||||||||| Sbjct: 121830 ctcaaggtctaccccatcct 121849
>gb|U95372.1|HVU95372 Haloferax volcanii plasmid pHV3 aminotransferase gene, partial cds, dehydrogenase and hydantoinase genes, complete cds, and oligopeptide ABC transporter gene, partial cds Length = 8455 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 cgcttcgaggtcgtcgagcg 569 |||||||||||||||||||| Sbjct: 4392 cgcttcgaggtcgtcgagcg 4411 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,056,040 Number of Sequences: 3902068 Number of extensions: 3056040 Number of successful extensions: 59072 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57166 Number of HSP's gapped (non-prelim): 1900 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)