ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40a02 |
|---|---|
| Clone Library Name | barley_pub |
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 98.6 bits (244), Expect = 1e-20 Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Frame = +3 Query: 99 AVPGVVDFRGGPAPRASTGRWSAAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXX 278 A G VDF G P + TG W A F+LG E ER AY+G++ NLI+YLT L + Sbjct: 25 AEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSA 84 Query: 279 XXXXXXXXXXXTMLPLLVACVADAWLGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGC 458 + PL+ A +ADA+ GR+ TI S ++ + M LTLS+++P C Sbjct: 85 ATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAEC 144 Query: 459 TSFTSLSGAC-SPSPVQVTIFYVSLYLVAL 545 + C S +P Q +F+ LYL+AL Sbjct: 145 -----IGDFCPSATPAQYAMFFGGLYLIAL 169
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 93.2 bits (230), Expect = 4e-19 Identities = 52/153 (33%), Positives = 79/153 (51%) Frame = +3 Query: 87 RSDGAVPGVVDFRGGPAPRASTGRWSAAMFVLGVEIAERFAYHGVSANLISYLTGPLGES 266 +SD + DF+G PA R+ TG W++A +L +E ER G+ NL++YLTG + Sbjct: 7 KSDDILLDAWDFQGRPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLG 66 Query: 267 TXXXXXXXXXXXXXXTMLPLLVACVADAWLGRFRTIVLASILFVVSMGMLTLSSALPVFH 446 ML LL +AD +LGR+ TI + + + + +LTLS+ +P Sbjct: 67 NATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLR 126 Query: 447 SDGCTSFTSLSGACSPSPVQVTIFYVSLYLVAL 545 C TS S S +Q+T+ Y++LYL AL Sbjct: 127 PPRCNPTTS-SHCEQASGIQLTVLYLALYLTAL 158
>S15A1_MOUSE (Q9JIP7) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 709 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/124 (30%), Positives = 62/124 (50%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A L+ Y LG + P+L A +AD+W Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGACSPSPVQVTIFYVSLY 533 LG+F+TIV SI++ + ++++SS + D +G+ PV V + V L Sbjct: 78 LGKFKTIVSLSIVYTIGQAVISVSSINDLTDHDH-------NGSPDSLPVHVALSMVGLA 130 Query: 534 LVAL 545 L+AL Sbjct: 131 LIAL 134
>S15A1_RABIT (P36836) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 707 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/124 (30%), Positives = 60/124 (48%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A LI Y +G + P+L A +ADAW Sbjct: 18 FIVVNEFCERFSYYGMRALLILYFRNFIGWDDNLSTVIYHTFVALCYLTPILGALIADAW 77 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGACSPSPVQVTIFYVSLY 533 LG+F+TIV SI++ + + +LSS + ++ G PV V + + L Sbjct: 78 LGKFKTIVWLSIVYTIGQAVTSLSSVNELTDNNH-------DGTPDSLPVHVAVCMIGLL 130 Query: 534 LVAL 545 L+AL Sbjct: 131 LIAL 134
>S15A1_RAT (P51574) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 710 Score = 62.4 bits (150), Expect = 8e-10 Identities = 36/124 (29%), Positives = 62/124 (50%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A L+ Y LG + P+L A +AD+W Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGACSPSPVQVTIFYVSLY 533 LG+F+TIV SI++ + ++++SS + D G+ + P+ V + + L Sbjct: 78 LGKFKTIVSLSIVYTIGQAVISVSSINDLTDHDH-------DGSPNNLPLHVALSMIGLA 130 Query: 534 LVAL 545 L+AL Sbjct: 131 LIAL 134
>S15A1_HUMAN (P46059) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 59.7 bits (143), Expect = 5e-09 Identities = 36/124 (29%), Positives = 59/124 (47%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A LI Y T + + P+L A +AD+W Sbjct: 18 FIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGACSPSPVQVTIFYVSLY 533 LG+F+TIV SI++ + + ++SS + + G PV V + + L Sbjct: 78 LGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNH-------DGTPDSLPVHVVLSLIGLA 130 Query: 534 LVAL 545 L+AL Sbjct: 131 LIAL 134
>S15A1_CANFA (Q8WMX5) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 58.5 bits (140), Expect = 1e-08 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 2/126 (1%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A LI Y +G + P+L A +AD+W Sbjct: 18 FIVVNEFCERFSYYGMRALLILYFRRFIGWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSA--LPVFHSDGCTSFTSLSGACSPSPVQVTIFYVS 527 LG+F+TIV SI++ + + +SS L ++ DG S V V + + Sbjct: 78 LGKFKTIVSLSIVYTIGQAVTAVSSINDLTDYNKDGTPDNLS---------VHVALSMIG 128 Query: 528 LYLVAL 545 L L+AL Sbjct: 129 LALIAL 134
>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)| Length = 743 Score = 57.8 bits (138), Expect = 2e-08 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF Y+G+ L+ YLT LG + + PL+ A +AD W Sbjct: 38 FIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGW 97 Query: 354 LGRFRTIVLASILF-----VVSMGMLTLS 425 LG+++TI+ S+++ VVS G + LS Sbjct: 98 LGKYKTILYLSLVYSLGAMVVSFGAVPLS 126
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 53.9 bits (128), Expect = 3e-07 Identities = 32/103 (31%), Positives = 52/103 (50%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A LI Y L + P+L A +AD+W Sbjct: 48 FIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSG 482 LG+F+TI+ S+++V+ + +L ALP+ + SL G Sbjct: 108 LGKFKTIIYLSLVYVLGHVIKSL-GALPILGGQVVHTVLSLIG 149
>S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 52.4 bits (124), Expect = 9e-07 Identities = 32/105 (30%), Positives = 51/105 (48%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A L Y L + P+L A +AD+W Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGAC 488 LG+F+TI+ S++ V+ + +L SA P+ + SL G C Sbjct: 108 LGKFKTIIYLSLVNVLGHVIKSL-SAFPILGGKVVHTVLSLVGLC 151
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/103 (29%), Positives = 50/103 (48%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A L Y L + P+L A +AD+W Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSG 482 LG+F+TI+ S+++V+ +L A+P+ + SL G Sbjct: 108 LGKFKTIIYLSLVYVLGHVFKSL-GAIPILGGKMLHTILSLVG 149
>S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/103 (29%), Positives = 50/103 (48%) Frame = +3 Query: 174 FVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAW 353 F++ E ERF+Y+G+ A L Y L + P+L A +AD+W Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107 Query: 354 LGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSG 482 LG+F+TI+ S+++V+ +L A+P+ + SL G Sbjct: 108 LGKFKTIIYLSLVYVLGHVFKSL-GAIPILGGKMLHTILSLVG 149
>OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3| Length = 701 Score = 46.2 bits (108), Expect = 6e-05 Identities = 33/128 (25%), Positives = 57/128 (44%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A F+LG E ERF+++G+ L YL S + PL+ + +A Sbjct: 16 AVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGSIMA 75 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLSSALPVFHSDGCTSFTSLSGACSPSPVQVTIFYV 524 D+ GRF+ I+ S ++VV +L+L G F S P++ ++ + Sbjct: 76 DSVFGRFKVILYGSSIYVVGHVLLSL----------GAVPFLSY-------PIRSSLDFS 118 Query: 525 SLYLVALA 548 L+++A A Sbjct: 119 GLFVIAFA 126
>OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide transporter| CPTA) Length = 785 Score = 46.2 bits (108), Expect = 6e-05 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +3 Query: 156 RWSAAMF-VLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLV 332 +W F ++G E+ ERF+++G+ A L Y L S PLL Sbjct: 29 KWPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLG 88 Query: 333 ACVADAWLGRFRTIVLASILFVVSMGMLTLSSALP 437 + +AD ++G+F TI SI + +L SS P Sbjct: 89 SILADGYIGKFWTIFFISIFYACGQILLAFSSIAP 123
>PTR2_SCHPO (Q9P380) Probable peptide transporter ptr2 (Peptide permease ptr2)| Length = 618 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 10/100 (10%) Frame = +3 Query: 159 WSAAMFVLGVEIAERFAYHGVSANLISYLT-GP---------LGESTXXXXXXXXXXXXX 308 W A + ++ VE+ ERFAY+G++ +Y+ GP LGES Sbjct: 83 WKAFIIII-VELCERFAYYGLTVPFQNYMQFGPKDATPGALNLGESGADGLSNFFTFWCY 141 Query: 309 XTMLPLLVACVADAWLGRFRTIVLASILFVVSMGMLTLSS 428 T P+ A +AD +LGR+ TIV +++++ + + +LT ++ Sbjct: 142 VT--PVGAALIADQFLGRYNTIVCSAVIYFIGILILTCTA 179
>OPT2_CAEEL (Q21219) Oligopeptide transporter 2 (Di-/tri-peptide transporter| CPTB) Length = 835 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/84 (30%), Positives = 40/84 (47%) Frame = +3 Query: 177 VLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAWL 356 ++ E ERF+Y+G+ L YL L + PLL + VAD ++ Sbjct: 51 IVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGSIVADGYI 110 Query: 357 GRFRTIVLASILFVVSMGMLTLSS 428 G+F TI SIL+ + +L L+S Sbjct: 111 GKFWTIFSVSILYAIGQVVLALAS 134
>YJDL_ECOLI (P39276) Inner membrane transporter yjdL| Length = 485 Score = 39.3 bits (90), Expect = 0.008 Identities = 26/86 (30%), Positives = 44/86 (51%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A +++ ++I E F+++G+ A LI YLT LG + P+L +A Sbjct: 9 AIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTPILGGWLA 68 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTL 422 D LG RT V+A L ++++G + L Sbjct: 69 DRLLGN-RTAVIAGAL-LMTLGHVVL 92
>PTR2_YEAST (P32901) Peptide transporter PTR2 (Peptide permease PTR2)| Length = 601 Score = 36.2 bits (82), Expect = 0.064 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Frame = +3 Query: 186 VEIAERFAYHGVSANLISYL--------TGPLGESTXXXXXXXXXXXXXXTMLPLLVACV 341 VE++ERF+Y+G+SA +Y+ G L ++ + P+ V Sbjct: 88 VELSERFSYYGLSAPFQNYMEYGPNDSPKGVLSLNSQGATGLSYFFQFWCYVTPVFGGYV 147 Query: 342 ADAWLGRFRTIVLASILFVVSMGMLTLSSALPVFHSD 452 AD + G++ TI + +++ + +L ++S V + D Sbjct: 148 ADTFWGKYNTICCGTAIYIAGIFILFITSIPSVGNRD 184
>YHIP_ECOLI (P36837) Inner membrane transporter yhiP| Length = 489 Score = 35.4 bits (80), Expect = 0.11 Identities = 25/84 (29%), Positives = 34/84 (40%) Frame = +3 Query: 186 VEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVADAWLGRF 365 VE+ ERF Y+GV L + LG S L + V D LG Sbjct: 22 VELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTK 81 Query: 366 RTIVLASILFVVSMGMLTLSSALP 437 RTIVL +++ + M +S P Sbjct: 82 RTIVLGALVLAIGYFMTGMSLLKP 105
>TPPB_ECOLI (P77304) Tripeptide permease tppB| Length = 500 Score = 35.4 bits (80), Expect = 0.11 Identities = 21/87 (24%), Positives = 35/87 (40%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A + +E+ ERF Y+G+ + YL LG S L + + Sbjct: 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLG 81 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLS 425 D LG R I+L +I+ + ++ S Sbjct: 82 DKVLGTKRVIMLGAIVLAIGYALVAWS 108
>TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB| Length = 500 Score = 35.4 bits (80), Expect = 0.11 Identities = 21/87 (24%), Positives = 35/87 (40%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A + +E+ ERF Y+G+ + YL LG S L + + Sbjct: 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLG 81 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLS 425 D LG R I+L +I+ + ++ S Sbjct: 82 DKVLGTKRVIMLGAIVLAIGYALVAWS 108
>TPPB_ECO57 (Q8X651) Tripeptide permease tppB| Length = 500 Score = 35.4 bits (80), Expect = 0.11 Identities = 21/87 (24%), Positives = 35/87 (40%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A + +E+ ERF Y+G+ + YL LG S L + + Sbjct: 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLG 81 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLS 425 D LG R I+L +I+ + ++ S Sbjct: 82 DKVLGTKRVIMLGAIVLAIGYALVAWS 108
>TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB| Length = 501 Score = 35.0 bits (79), Expect = 0.14 Identities = 20/87 (22%), Positives = 35/87 (40%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A + +E+ ERF Y+G+ + YL LG S L + + Sbjct: 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLG 81 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLS 425 D LG R I+L +++ + ++ S Sbjct: 82 DKILGTKRVIMLGAVVLAIGYALVAWS 108
>TPPB_SALTI (Q8Z6Q5) Tripeptide permease tppB| Length = 501 Score = 35.0 bits (79), Expect = 0.14 Identities = 20/87 (22%), Positives = 35/87 (40%) Frame = +3 Query: 165 AAMFVLGVEIAERFAYHGVSANLISYLTGPLGESTXXXXXXXXXXXXXXTMLPLLVACVA 344 A + +E+ ERF Y+G+ + YL LG S L + + Sbjct: 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLG 81 Query: 345 DAWLGRFRTIVLASILFVVSMGMLTLS 425 D LG R I+L +++ + ++ S Sbjct: 82 DKILGTKRVIMLGAVVLAIGYALVAWS 108
>DTPT_LACLA (P36574) Di-/tripeptide transporter| Length = 497 Score = 31.6 bits (70), Expect = 1.6 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Frame = +3 Query: 189 EIAERFAYHGVSANLISYL-------TGPLGESTXXXXXXXXXXXXXXTMLPLLVACVAD 347 E ERF+Y+G+ A L+ YL LG + ++ VAD Sbjct: 25 EFWERFSYYGMRAILVYYLYALTTADNAGLGLPKAQAMAIVSIYGALVYLSTIVGGWVAD 84 Query: 348 AWLGRFRTIVLASILFVVSMGMLTLSS 428 LG RTI L IL +++G + L++ Sbjct: 85 RLLGASRTIFLGGIL--ITLGHIALAT 109
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -1 Query: 308 HAAPRVDRRGGAGRRLPQRARQV-ADEVRRHPVVREPLRDLHTEDEHXXXXXXXXXXXXX 132 H VDR G +G Q +D H R R +++ Sbjct: 2477 HYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSGSRHHE 2536 Query: 131 XXAEVDHAGHGAVGPGQEEGAGGVHSW 51 + D +GH VG GQ EG +W Sbjct: 2537 ASSRADSSGHSQVGQGQSEGPRTSRNW 2563 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/99 (24%), Positives = 32/99 (32%), Gaps = 4/99 (4%) Frame = -1 Query: 332 HQQRQHRGHAAPRVDR-RGGAGRRLPQRARQVADEVRRHPVVREPLRDLHTEDEHXXXXX 156 H + G AA ++ R G R R +Q AD R + R + H Sbjct: 1009 HAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSG 1068 Query: 155 XXXXXXXXXXAEVDH---AGHGAVGPGQEEGAGGVHSWS 48 E D +GHG GP Q+ WS Sbjct: 1069 SQASDSEGHSEESDTQSVSGHGQDGPHQQSHQESARDWS 1107
>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A| (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and leucine-rich repeat protein 11) Length = 1146 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 2/63 (3%) Frame = -2 Query: 184 PRTNMAADH--RPVEARGAGPPRKSTTPGTAPSDRGRRRARVASILGQSFRQLRVCAGRL 11 P+ H RP PPR S TP + G RR RV R+ + C R Sbjct: 549 PKIQFTKPHTMRPASRHSTAPPRTSGTPSGTTASSGARRRRVRC------RKCQACVQRE 602 Query: 10 EGT 2 GT Sbjct: 603 CGT 605
>SEM4C_MOUSE (Q64151) Semaphorin-4C precursor (Semaphorin I) (Sema I)| (Semaphorin C-like 1) (M-Sema F) Length = 834 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 284 RGGAGRRLPQRARQVADEVRRHPVVREPLRDLHTED 177 RGG+G LP+ +ADE+RR R+PL D + E+ Sbjct: 800 RGGSGHPLPE----LADELRRKLQQRQPLPDSNPEE 831
>GLNT_BACSU (O31464) Probable sodium/glutamine symporter glnT| Length = 463 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +3 Query: 102 VPGVVDFRGGPAPRASTG---RWSAAMFVLGVEIAERFAYHGVSANLIS 239 V V FRGGPA G RW A+F + + ++ ++ V +N +S Sbjct: 108 VKDVNGFRGGPAYYMEKGLNKRWMGALFAVLITLSFGIVFNSVQSNTVS 156
>LEF11_NPVLD (Q9YMS9) Late expression factor 11| Length = 187 Score = 30.0 bits (66), Expect = 4.6 Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 18/110 (16%) Frame = -1 Query: 347 VGDAGHQQRQHRGHAAPRVDR----------------RGGAGRRLPQRARQV--ADEVRR 222 VGD ++R+H G A R DR G G P R R+ A +VR Sbjct: 79 VGD-NCRERKHLGQHAARFDRVFSLKRRTLYDEYHASAGRYGDTKPCRKRRFSRAAQVRD 137 Query: 221 HPVVREPLRDLHTEDEHXXXXXXXXXXXXXXXAEVDHAGHGAVGPGQEEG 72 P +E L D +D V H G G V PGQE G Sbjct: 138 QPAQQERLGDQSVQDSPLRKEKDL----------VPHQGVGGVRPGQENG 177
>OR2H1_HUMAN (Q9GZK4) Olfactory receptor 2H1 (Hs6M1-16) (Olfactory receptor 6-2)| (OR6-2) (OLFR42A-9004.14/9026.2) Length = 316 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 372 IVLASILFVVSMGMLTLSS----ALPVFHSDGCTSFTSLSGACSPSPVQVTIFYVSLYLV 539 + ++S++FVV L L+S A V + T++ G CS VT+FY S+ V Sbjct: 197 LAVSSVIFVVVPLSLILASYGATAQAVLRINSATAWRKAFGTCSSHLTVVTLFYSSVIAV 256 Query: 540 AL 545 L Sbjct: 257 YL 258
>PITM2_MOUSE (Q6ZPQ6) Membrane-associated phosphatidylinositol transfer protein| 2 (Phosphatidylinositol transfer protein, membrane-associated 2) (Pyk2 N-terminal domain-interacting receptor 3) (NIR-3) (Drosophila retinal degeneration B homolog 2) (RdgB2) Length = 1335 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = -2 Query: 190 STPRTNMAADHRPVEARGAGPPRKSTTPGTAPSDRGRRRARVASILGQ 47 ST ++ H V A P ++PGTAP+ RG RRA SI Q Sbjct: 784 STLLADVLQTHNTVFQEHAAP----SSPGTAPAGRGFRRASEISIASQ 827
>MURB_XANCP (Q8P9R1) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 350 Score = 29.3 bits (64), Expect = 7.9 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -1 Query: 344 GDAGHQQRQHRGHAAPRVDRRGGAGRRLPQRARQVADEVR-RHPVVREP 201 GDAG + HA V+ +G +L ARQVA+ VR R+ V+ EP Sbjct: 297 GDAGISE----AHALVLVNHGSASGAQLLAFARQVAESVRERYSVILEP 341
>MURB_XANC8 (Q4UTX4) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 350 Score = 29.3 bits (64), Expect = 7.9 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -1 Query: 344 GDAGHQQRQHRGHAAPRVDRRGGAGRRLPQRARQVADEVR-RHPVVREP 201 GDAG + HA V+ +G +L ARQVA+ VR R+ V+ EP Sbjct: 297 GDAGISE----AHALVLVNHGSASGAQLLAFARQVAESVRERYSVILEP 341
>SEM4C_HUMAN (Q9C0C4) Semaphorin-4C precursor| Length = 833 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 284 RGGAGRRLPQRARQVADEVRRHPVVREPLRDLHTED 177 RGG G LP+ +ADE+RR R+PL D + E+ Sbjct: 799 RGGLGHPLPE----LADELRRKLQQRQPLPDSNPEE 830 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,055,860 Number of Sequences: 219361 Number of extensions: 1076876 Number of successful extensions: 4663 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4644 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
