Clone Name | bart39h10 |
---|---|
Clone Library Name | barley_pub |
>TLP_ORYSA (P31110) Thaumatin-like protein precursor| Length = 177 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 140 APGATWPTRVPMATAVGRARGRTIAGYGVRGGGKC 36 +PG TW VP T+ GR GRT + G G C Sbjct: 53 SPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSC 87
>SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2)| Length = 1004 Score = 32.3 bits (72), Expect = 0.95 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -1 Query: 201 PQREQPDVVEQLPQAYEEEAGARRDVADEGAHGYRGRESARTDNRGVRSE 52 PQ +QP E++ + EE+ DV DE + RG ES VR + Sbjct: 749 PQSQQPSPEEEMSEEEEEDEEEEEDVTDEDSLAGRGSESGGEKAISVRGD 798
>PTPRG_MOUSE (Q05909) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1442 Score = 31.6 bits (70), Expect = 1.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 137 PGATWPTRVPMATAVGRARGRTI 69 P WPTR+P A+A + GRT+ Sbjct: 530 PSTVWPTRLPTASAASKQAGRTV 552
>LRTM4_MOUSE (Q80XG9) Leucine-rich repeat transmembrane neuronal protein 4| precursor Length = 590 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +1 Query: 46 PPLTPYPAIVRPRALPTAVAMGTLVGHVAPGAGFLLIGLWQLFNHIRLFSLRPGSYA 216 PP P P I +P A+P + V+P GF + G + H+ + GS A Sbjct: 381 PPFIPKPTIFKPDAVPATLEA------VSPSPGFQIPGTDHEYEHVSFHKIIAGSVA 431
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -1 Query: 192 EQPDVVEQLPQAYEEEAGARRDVADEGAHGYRGRESARTDNRGVRSEGRR 43 E+ D E+L + EE+ RD +EGA G+R +SA + R ++G++ Sbjct: 331 EEVDYTEKLKFSDEEDG---RDSDEEGAEGHRDSQSASGEERPPEADGKK 377
>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Frame = -1 Query: 234 GEPDRRGVGAG--------PQREQPDVVEQLPQAYEEEAGARRDVADEGAHGYRGRESAR 79 G DRRG G G PQ Q + E L A + +RR +EG G G +S+ Sbjct: 894 GTEDRRGTGRGSGGGRHNLPQAAQVEEDEPLLFAMSDFGASRRSF-EEGRQGNHGPDSSG 952 Query: 78 TDNRGVRSEGRREML 34 R G+R L Sbjct: 953 NTGSSRRGSGKRGTL 967
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 30.4 bits (67), Expect = 3.6 Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 1/147 (0%) Frame = -2 Query: 467 TASRIGARTLSMWMVTAANASRASEMDACSKLWRWSDGMVPSSSNGWCFAGPITSSIRMD 288 + S T S W +A+ ++ A W+ S M PS ++ W Sbjct: 169 SGSSSAGSTGSRW-TSASTRGASTSPRATPPTWQRSTSMPPSRASPW------------- 214 Query: 287 IDVPTMTRMSSRWRTPRAGNQTGAA*EPGRSENSRMWLNSCHRPM-RRKPAPGATWPTRV 111 R RWRT ++T GRS ++ +++ M RR +P T Sbjct: 215 ------PRYGRRWRTAGTASRTTTRTRTGRSWSTGSIVSAAPTAMPRRSTSPPRASSTSP 268 Query: 110 PMATAVGRARGRTIAGYGVRGGGKCWW 30 A + R RG G+ G WW Sbjct: 269 WRAIELWRLRGEDGKAPGMIG----WW 291
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = -2 Query: 242 PRAGNQTGAA*EPGRSENSRMWLNSCHRPMRRKPAPGATWPTRVPMATAVGRARGRTIAG 63 PR G++ EPGRS + S P RR P+PGAT TR + R + + Sbjct: 2026 PRVGSR-----EPGRSLHKAA---SVELPQRRSPSPGATRLTRGGLGEGEYAQRLQALRQ 2077 Query: 62 YGVRGG 45 +RGG Sbjct: 2078 RLLRGG 2083
>RL18_NOCFA (Q5Z1Q6) 50S ribosomal protein L18| Length = 135 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -1 Query: 231 EPDRRGVGAGPQREQPDVVEQLPQAYEEEAGARRDVADEGAHGYRGRESARTD 73 EPD R V G + + V +L A + AG V D G H Y GR +A D Sbjct: 75 EPDVRAV-EGDKTAKGKKVGELIAARAKAAGVEAVVFDRGGHDYHGRIAALAD 126
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = -2 Query: 242 PRAGNQTGAA*EPGRSENSRMWLNSCHRPMRRKPAPGATWPTRVPMATAVGRARGRTIAG 63 PR G++ EPGRS + S P RR P+PGAT TR + R + + Sbjct: 2026 PRVGSR-----EPGRSLHKAA---SVELPQRRSPSPGATRLTRGGLGEGEYAQRLQALRQ 2077 Query: 62 YGVRGG 45 +RGG Sbjct: 2078 RLLRGG 2083
>MRGX2_MACMU (Q4QXU5) Mas-related G-protein coupled receptor member X2| Length = 329 Score = 30.0 bits (66), Expect = 4.7 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = +1 Query: 220 PVWFPARGVRHLELILVIVGTSMSILMELVIGPAKHQPFDDD 345 P+W+ R RHL ++ ++ ++S+L+ ++ G F DD Sbjct: 133 PIWYRCRRPRHLSAVMCVLLWALSLLLSILEGKFCGFLFSDD 174
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/71 (32%), Positives = 30/71 (42%) Frame = +1 Query: 13 PNAADHHQHFPPPLTPYPAIVRPRALPTAVAMGTLVGHVAPGAGFLLIGLWQLFNHIRLF 192 P A + P P PA R A A A G + APG+ LL G+ L Sbjct: 75 PAAPPEPRPQPQPQPRSPAARRAAARSRAAAAGGMRRDPAPGSSMLLFGVSLACYSPSLK 134 Query: 193 SLRPGSYAAPV 225 S++ +Y APV Sbjct: 135 SVQDQAYKAPV 145
>GLR36_ARATH (Q84W41) Glutamate receptor 3.6 precursor (Ligand-gated ion channel| 3.6) Length = 903 Score = 29.6 bits (65), Expect = 6.1 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Frame = -2 Query: 341 SSNGWCFAGPITSSIRMDIDVP--------TMTRMSSRWRTPRAGNQTGAA*EPGRSENS 186 + NGW FA P S + +D+ M R+ +W +A + GA E R E Sbjct: 758 TKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELK 817 Query: 185 RMW 177 W Sbjct: 818 SFW 820
>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)| (BSU1-like protein 3) Length = 715 Score = 29.6 bits (65), Expect = 6.1 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 3/96 (3%) Frame = +1 Query: 52 LTPYPAIVRPRALPTAVAMGTLV---GHVAPGAGFLLIGLWQLFNHIRLFSLRPGSYAAP 222 LTPY PRA A A+GT+V G + P AG L + + L RP + Sbjct: 143 LTPYGEPPSPRAAHVATAVGTMVVIQGGIGP-AGLSAEDL----HVLDLTQQRPRWHRVV 197 Query: 223 VWFPARGVRHLELILVIVGTSMSILMELVIGPAKHQ 330 V P G R+ ++ +VG + + G AKH+ Sbjct: 198 VQGPGPGPRYGH-VMALVGQRYLMPLASAYGLAKHR 232
>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)| Length = 529 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/57 (29%), Positives = 22/57 (38%) Frame = -2 Query: 365 WSDGMVPSSSNGWCFAGPITSSIRMDIDVPTMTRMSSRWRTPRAGNQTGAA*EPGRS 195 W P +GW GP TS I + P+ + S W P G + PG S Sbjct: 214 WEHPNTPRGLSGW--EGPSTSRILSGWEGPSASWALSAWEGPSTSRALGLSESPGSS 268
>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (CaVT.3) Length = 2201 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 234 GEPDRRGVGAGPQREQPDVVEQLPQAYEEEAGARR---DVADEGAHGYRGRESARTDNRG 64 G + G GPQ + V L + E+E GA R DV E RG ++ NRG Sbjct: 544 GSAEAEANGDGPQSSEDGVSSDLGKEEEQEDGAARLCGDVWRETREKLRGIVDSKYFNRG 603 Query: 63 V 61 + Sbjct: 604 I 604
>OS81_SOLCO (P50702) Osmotin-like protein OSML81 precursor (PA81)| Length = 247 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/38 (34%), Positives = 16/38 (42%) Frame = -2 Query: 149 RKPAPGATWPTRVPMATAVGRARGRTIAGYGVRGGGKC 36 R+ G TW P T + R GRT + G G C Sbjct: 45 RRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSC 82
>MRGX2_PYGBI (Q4QXU2) Mas-related G-protein coupled receptor member X2| Length = 330 Score = 29.3 bits (64), Expect = 8.0 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +1 Query: 220 PVWFPARGVRHLELILVIVGTSMSILMELVIG 315 P+W+ R RHL +L ++ ++S+L+ ++ G Sbjct: 134 PIWYRCRRPRHLSAVLCVLLWALSLLLSILEG 165
>TM45A_HUMAN (Q9NWC5) Transmembrane protein 45a (Dermal papilla-derived protein| 7) (DNA polymerase-transactivated protein 4) Length = 275 Score = 29.3 bits (64), Expect = 8.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 Query: 106 MGTLVGHVAPGAGFLLIGLW 165 MG GH PG F +IGLW Sbjct: 1 MGNFRGHALPGTFFFIIGLW 20
>POLG_HCVJT (Q00269) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +1 Query: 121 GHVAPGAGFLLIGLWQLFNHIRLFSLRPGSYAAPVWFPAR--GVRHLELILVIVGTSMSI 294 G + PGA + L G+W L + L +L P +YA A GV + LIL+ + + Sbjct: 779 GRLVPGAAYALYGVWPLL--LLLLALPPRAYAMDREMAASCGGVVFVGLILLTLSPHYKV 836 Query: 295 LMELVI 312 + +I Sbjct: 837 FLARLI 842
>OSMO_TOBAC (P14170) Osmotin precursor| Length = 246 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = -2 Query: 134 GATWPTRVPMATAVGRARGRTIAGYGVRGGGKC 36 G TW P T + R GRT + G G C Sbjct: 50 GQTWVINAPRGTKMARVWGRTNCNFNAAGRGTC 82
>GPDA_BORPA (Q7W1R0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 351 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 216 GVGAGPQREQPDVVEQLPQAYE--EEAGARRDVADEGAHGYRGRESARTDNRGVRSEGRR 43 GV +GP + +V + LP A E+ A RD HG R A TD GV G Sbjct: 149 GVLSGPSFAR-EVAQGLPVALTVASESSAVRDAVTTALHGAAVRIYASTDVVGVEVGGAL 207 Query: 42 EMLVVIGC 19 + ++ + C Sbjct: 208 KNVIAVAC 215
>GPDA_BORBR (Q7WQN6) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 351 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 216 GVGAGPQREQPDVVEQLPQAYE--EEAGARRDVADEGAHGYRGRESARTDNRGVRSEGRR 43 GV +GP + +V + LP A E+ A RD HG R A TD GV G Sbjct: 149 GVLSGPSFAR-EVAQGLPVALTVASESSAVRDAVTTALHGAAVRIYASTDVVGVEVGGAL 207 Query: 42 EMLVVIGC 19 + ++ + C Sbjct: 208 KNVIAVAC 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,550,646 Number of Sequences: 219361 Number of extensions: 995514 Number of successful extensions: 4060 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3850 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4049 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)