ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39h07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ421947.1|TAE421947 Triticum aestivum mRNA for NADPH-thioredoxin reductase (ntr gene) Length = 1045 Score = 638 bits (322), Expect = e-180 Identities = 343/350 (98%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggccgccaacggcatggaggaggcggccgcgggcccgc 265 ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 3 ccgcgactgccaccgccgccgcggccgccaacgggatggaggaggcggccgcgggcccgc 62 Query: 266 tgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtctacg 325 ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 63 tgcacacgcgcgtgtgcatcattgggagcggccccgccgcgcacacggcggccgtctacg 122 Query: 326 cggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatcgcgg 385 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 cggcacgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatcgcgg 182 Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggca 242 Query: 446 tcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggaccaaga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggaccaaga 302 Query: 506 tcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 352
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 537 bits (271), Expect = e-149 Identities = 393/433 (90%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 123 cttgatgcgcctctgctccaagctcgccgcgctgctccggaggtcccgcccgtttgcggc 182 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | Sbjct: 12695551 cttgatgcgcctctgctccaagctcgcggcgctgctccggaggtcccgccagttcgcgcc 12695492 Query: 183 agccaccgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgccaacggcat 242 || ||||||||||||||| || ||||| ||| | |||||| |||| ||||| || Sbjct: 12695491 cgcagccgccgccgcgtccgggtcagcgacggccgcggccgcgtcggcg---aacgggat 12695435 Query: 243 ggaggaggcggccgcgggcccgctgcgcacccgcgtgtgcatcatcgggagcggccccgc 302 ||||||||||||||||||||||||||| | ||||||||||||||||||||||| || || Sbjct: 12695434 ggaggaggcggccgcgggcccgctgcgggcgcgcgtgtgcatcatcgggagcgggccggc 12695375 Query: 303 cgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 362 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12695374 ggcgcacacggcggcggtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 12695315 Query: 363 ctggctcgccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaa 422 || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 12695314 cttcctcgccaacgacatcgccgcgggggggcagctcaccaccaccaccgacgtcgagaa 12695255 Query: 423 cttccccggcttccccgacggcatcctcggcatcgacctcatggaccgctgccgcgcgca 482 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 12695254 cttcccgggcttccccgacggcatcctcggcgccgacctcatggaccgctgccgcgccca 12695195 Query: 483 gtccgtgcgcttcgggaccaagatcttctccgagaccgtcacctccgtcgacttctcctc 542 |||||||||||||||||||| |||| || |||||||||||||| |||||||| |||| || Sbjct: 12695194 gtccgtgcgcttcgggaccaggatcctcaccgagaccgtcaccgccgtcgacctctcgtc 12695135 Query: 543 ccgccccttccgc 555 ||||||||||||| Sbjct: 12695134 ccgccccttccgc 12695122 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 ccgcgtccgtctccgcgaccgccaccgcc 222 |||| |||| ||||||||||||||||||| Sbjct: 2395982 ccgcctccgcctccgcgaccgccaccgcc 2396010
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 537 bits (271), Expect = e-149 Identities = 393/433 (90%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 123 cttgatgcgcctctgctccaagctcgccgcgctgctccggaggtcccgcccgtttgcggc 182 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | Sbjct: 49072 cttgatgcgcctctgctccaagctcgcggcgctgctccggaggtcccgccagttcgcgcc 49013 Query: 183 agccaccgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgccaacggcat 242 || ||||||||||||||| || ||||| ||| | |||||| |||| ||||| || Sbjct: 49012 cgcagccgccgccgcgtccgggtcagcgacggccgcggccgcgtcggcg---aacgggat 48956 Query: 243 ggaggaggcggccgcgggcccgctgcgcacccgcgtgtgcatcatcgggagcggccccgc 302 ||||||||||||||||||||||||||| | ||||||||||||||||||||||| || || Sbjct: 48955 ggaggaggcggccgcgggcccgctgcgggcgcgcgtgtgcatcatcgggagcgggccggc 48896 Query: 303 cgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 362 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48895 ggcgcacacggcggcggtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 48836 Query: 363 ctggctcgccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaa 422 || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 48835 cttcctcgccaacgacatcgccgcgggggggcagctcaccaccaccaccgacgtcgagaa 48776 Query: 423 cttccccggcttccccgacggcatcctcggcatcgacctcatggaccgctgccgcgcgca 482 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 48775 cttcccgggcttccccgacggcatcctcggcgccgacctcatggaccgctgccgcgccca 48716 Query: 483 gtccgtgcgcttcgggaccaagatcttctccgagaccgtcacctccgtcgacttctcctc 542 |||||||||||||||||||| |||| || |||||||||||||| |||||||| |||| || Sbjct: 48715 gtccgtgcgcttcgggaccaggatcctcaccgagaccgtcaccgccgtcgacctctcgtc 48656 Query: 543 ccgccccttccgc 555 ||||||||||||| Sbjct: 48655 ccgccccttccgc 48643
>dbj|AK106368.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-C03, full insert sequence Length = 1383 Score = 432 bits (218), Expect = e-118 Identities = 281/302 (93%) Strand = Plus / Plus Query: 254 ccgcgggcccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacgg 313 |||||||||||||||| | ||||||||||||||||||||||| || || |||||||||| Sbjct: 177 ccgcgggcccgctgcgggcgcgcgtgtgcatcatcgggagcgggccggcggcgcacacgg 236 Query: 314 cggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgcca 373 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 237 cggcggtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggcttcctcgcca 296 Query: 374 acgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggct 433 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 297 acgacatcgccgcgggagggcagctcaccaccaccaccgacgtcgagaacttcccgggct 356 Query: 434 tccccgacggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgct 493 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 357 tccccgacggcatcctcggcgccgacctcatggaccgctgccgcgcccagtccgtgcgct 416 Query: 494 tcgggaccaagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttcc 553 ||||||||| |||| || |||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 417 tcgggaccaggatcctcaccgagaccgtcaccgccgtcgacctctcgtcccgccccttcc 476 Query: 554 gc 555 || Sbjct: 477 gc 478 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 123 cttgatgcgcctctgctccaagctcgccgcgctgctccggaggtcccgc 171 |||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 132 cttgatgcgcctctactccaagctcgcggcgctgctccggaggtcccgc 180 Score = 40.1 bits (20), Expect = 7.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 161 ggaggtcccgcccgtttgcggcagccaccgccgccgcgtccgtctccgcgaccgccaccg 220 |||||||||||| ||| ||| | || ||||||||||||||| || ||||| ||| ||| Sbjct: 64 ggaggtcccgccagttcgcgcccgcagccgccgccgcgtccgggtcagcgacggccgccg 123 Query: 221 ccgc 224 |||| Sbjct: 124 ccgc 127
>gb|AY104846.1| Zea mays PCO061833 mRNA sequence Length = 1380 Score = 323 bits (163), Expect = 3e-85 Identities = 247/275 (89%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||| | ||||||||||||||||| ||||| ||||||||||| ||| || Sbjct: 144 ccgctccgcacgcgcatctgcatcatcgggagcggtcccgctgcgcacacggcagccatc 203 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 |||||||| ||||| ||||||||||| |||||||||||||||||| | |||||||||||| Sbjct: 204 tacgcggcccgcgcggagctcaagcctgtgctcttcgagggctggatggccaacgacatc 263 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 264 gccgcgggcgggcagctcaccaccaccaccgacgtcgagaacttcccgggcttccccaac 323 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 |||||| | ||| ||||||||||||| |||||||||||||||| ||||||| || ||| Sbjct: 324 ggcatcatgggcgccgacctcatggacaactgccgcgcgcagtccctgcgctttggcacc 383 Query: 502 aagatcttctccgagaccgtcacctccgtcgactt 536 || ||| ||||||||||||||||| |||||||||| Sbjct: 384 aacatcctctccgagaccgtcaccgccgtcgactt 418
>ref|XM_467446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 129 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 188 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 248 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 249 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 308 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 309 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 368 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 369 agcatcatctccgagaccgtcaccgcggtcgacttctccgcccgccccttccgc 422
>ref|XM_506936.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.9 mRNA Length = 1503 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 146 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 205 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 265 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 266 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 325 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 326 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 385 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 386 agcatcatctccgagaccgtcaccgcggtcgacttctccgcccgccccttccgc 439
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 29569584 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 29569643 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29569644 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 29569703 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 29569704 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 29569763 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 29569764 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 29569823 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 29569824 agcatcatctccgagaccgtcaccgcggtcgacttctccgcccgccccttccgc 29569877 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 476 gcgcgcagtccgtgcgcttcgggaccaagatcttctccgagaccgtcacctccgtcgact 535 |||| ||||| || ||||||||||||| |||| |||||||||| |||||| |||||||| Sbjct: 16025766 gcgcacagtctgtacgcttcgggaccaggatcctctccgagactgtcaccgccgtcgacc 16025707 Query: 536 tctcctcccgccccttc 552 |||||| |||||||| Sbjct: 16025706 cctcctcgtgccccttc 16025690 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 189 cgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgc 233 |||||||||||||| | ||||| | || |||||||||||||||| Sbjct: 13300693 cgccgccgcgtccgccgccgcgttcacctccgccgcggcggccgc 13300737 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 33564965 ccgccaccgccaccgccgcggccgccgc 33564938 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gcgaccgccaccgccgcggcggcc 231 ||||||||| |||||||||||||| Sbjct: 31632533 gcgaccgccgccgccgcggcggcc 31632556 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 24178033 accgccaccgccgcggccgccgcc 24178010 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 accgccgccgcgtccgtctccgcgaccg 214 ||||||||||| |||| ||||||||||| Sbjct: 19299171 accgccgccgcctccgcctccgcgaccg 19299144 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 4171157 accgccaccgccgcggccgccgcc 4171134
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 27305 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 27364 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27365 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 27424 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 27425 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 27484 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 27485 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 27544 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 27545 agcatcatctccgagaccgtcaccgcggtcgacttctccgcccgccccttccgc 27598
>dbj|AK071251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H21, full insert sequence Length = 1502 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 145 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 204 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 264 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 265 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 324 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 325 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 384 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 385 agcatcatctccgagaccgtcaccgcggtcgacttctccgcccgccccttccgc 438
>dbj|AK104317.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C03, full insert sequence Length = 1389 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Plus Query: 262 ccgctgcgcacccgcgtgtgcatcatcgggagcggccccgccgcgcacacggcggccgtc 321 ||||| ||||| ||||||||||||||||||||||| || | |||||||||||||| || Sbjct: 129 ccgctccgcacgcgcgtgtgcatcatcgggagcgggccgtcggcgcacacggcggcgatc 188 Query: 322 tacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 381 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tacgccgcccgcgcggagctcaagcccgtgctcttcgagggctggctcgccaacgacatc 248 Query: 382 gcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgac 441 |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 249 gcggcggggggccagctcaccaccaccaccgacgtcgagaacttcccggggttccccgag 308 Query: 442 ggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttcgggacc 501 || ||||||||| ||| |||||||| || |||||||| |||||| | || ||||| ||| Sbjct: 309 gggatcctcggcggcgagctcatggatcggtgccgcgcccagtccctccggttcggcacc 368 Query: 502 aagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 | ||| ||||||||||||||||| | |||||||||||| || ||||||||||| Sbjct: 369 agcatcatctccgagaccgtcaccgcggtcgacttctccgcctgccccttccgc 422
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 210 bits (106), Expect = 4e-51 Identities = 207/240 (86%), Gaps = 3/240 (1%) Strand = Plus / Plus Query: 319 gtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgac 378 ||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 79093 gtctacgtggcgtgcgccgagctcaagcccgtgctcttcgagggcttcttcgggaacgac 79152 Query: 379 atcgcggcgggcgggcagctcaccaccacca---ccgacgtcgagaacttccccggcttc 435 ||||| ||||| |||||||||||||||||| |||| || ||||| ||||| |||||| Sbjct: 79153 atcgccacgggccggcagctcaccaccaccagcaccgatgttgagaatttcccaggcttc 79212 Query: 436 cccgacggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttc 495 ||| |||| ||||||| | |||||||||||||||||||||||||||| | |||| |||| Sbjct: 79213 cccaacggtatcctcgacgccgacctcatggaccgctgccgcgcgcagcctgtgcacttc 79272 Query: 496 gggaccaagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 ||||||| |||| |||||||||| |||||| |||||||| |||||| ||||||||||| Sbjct: 79273 gggaccaggatcgtctccgagactgtcaccgccgtcgacccctcctcgtgccccttccgc 79332
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 210 bits (106), Expect = 4e-51 Identities = 207/240 (86%), Gaps = 3/240 (1%) Strand = Plus / Plus Query: 319 gtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgac 378 ||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 26191908 gtctacgtggcgtgcgccgagctcaagcccgtgctcttcgagggcttcttcgggaacgac 26191967 Query: 379 atcgcggcgggcgggcagctcaccaccacca---ccgacgtcgagaacttccccggcttc 435 ||||| ||||| |||||||||||||||||| |||| || ||||| ||||| |||||| Sbjct: 26191968 atcgccacgggccggcagctcaccaccaccagcaccgatgttgagaatttcccaggcttc 26192027 Query: 436 cccgacggcatcctcggcatcgacctcatggaccgctgccgcgcgcagtccgtgcgcttc 495 ||| |||| ||||||| | |||||||||||||||||||||||||||| | |||| |||| Sbjct: 26192028 cccaacggtatcctcgacgccgacctcatggaccgctgccgcgcgcagcctgtgcacttc 26192087 Query: 496 gggaccaagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccgc 555 ||||||| |||| |||||||||| |||||| |||||||| |||||| ||||||||||| Sbjct: 26192088 gggaccaggatcgtctccgagactgtcaccgccgtcgacccctcctcgtgccccttccgc 26192147 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 tccgtctccgcgaccgccaccgccgc 224 ||||||||||| |||||||||||||| Sbjct: 33811054 tccgtctccgccaccgccaccgccgc 33811029
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 280 tgcatcatcgggagcggccccgccgcgcacacggcggccgtctacgcggcgcgcgccgag 339 ||||||||||| |||||||||||||| ||||| || || |||||||| || || ||||| Sbjct: 209461 tgcatcatcggcagcggccccgccgcccacaccgccgctgtctacgccgcccgtgccgaa 209520 Query: 340 ctcaagcccgtgctcttcgagggctggctcgccaacgacatcgcggcgggcgggcagctc 399 ||||| || | |||||||| || ||| | |||||||||||||| |||| || || ||| Sbjct: 209521 ctcaaaccaatcctcttcgaaggatggatggccaacgacatcgctccgggaggccaactc 209580 Query: 400 accaccaccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgac 459 ||||| || |||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 209581 accactacaaccgacgtcgagaatttccccggcttccccgacggcatcctcggcggcgaa 209640 Query: 460 ctcatggaccgctgccg 476 |||||||| || ||||| Sbjct: 209641 ctcatggaacgttgccg 209657
>emb|CR955012.2| Medicago truncatula chromosome 5 clone mth2-84f14, COMPLETE SEQUENCE Length = 117704 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 280 tgcatcatcgggagcggccccgccgcgcacacggcggccgtctacgcggcgcgcgccgag 339 ||||||||||| |||||||||||||| ||||| || || |||||||| || || ||||| Sbjct: 13264 tgcatcatcggcagcggccccgccgcccacaccgccgctgtctacgccgcccgtgccgaa 13323 Query: 340 ctcaagcccgtgctcttcgagggctggctcgccaacgacatcgcggcgggcgggcagctc 399 ||||| || | |||||||| || ||| | |||||||||||||| |||| || || ||| Sbjct: 13324 ctcaaaccaatcctcttcgaaggatggatggccaacgacatcgctccgggaggccaactc 13383 Query: 400 accaccaccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgac 459 ||||| || |||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 13384 accactacaaccgacgtcgagaatttccccggcttccccgacggcatcctcggcggcgaa 13443 Query: 460 ctcatggaccgctgccg 476 |||||||| || ||||| Sbjct: 13444 ctcatggaacgttgccg 13460
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggca 445 ||||||||||||| |||| ||||| ||| || ||||||||||||||||||||||| |||| Sbjct: 4563805 cgggcgggcagctgaccatcaccagcgaggtggagaacttccccggcttccccgagggca 4563864 Query: 446 tcctcgg 452 ||||||| Sbjct: 4563865 tcctcgg 4563871
>dbj|AB225345.1| Aspergillus oryzae cDNA, contig sequence: AoEST2197 Length = 1013 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccc 437 ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 371 ggcggtcagctcaccaccaccaccgacatcgagaacttccccggcttccc 420
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccc 437 ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 768040 ggcggtcagctcaccaccaccaccgacatcgagaacttccccggcttccc 767991
>gb|AY943951.1| Streptomyces sp. F2 arsenic gene cluster, partial sequence Length = 7932 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 396 gctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcatc 447 ||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 259 gctcaccacgaccaccgaggtcgagaacttccccggcttccccgagggcatc 208
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacg 442 ||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 2490807 ggcggccagctcaccatcaccaccgacgtcgagaactaccccggcttccgcgacg 2490753
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 394 cagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcatc 447 |||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 1185250 cagctcaccaccaccaccgaggtggagaacttccccggtttcccggacggcatc 1185303 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 ggaggcggccgcgggcccgctgcgc 270 |||||||||||||||| |||||||| Sbjct: 1415043 ggaggcggccgcgggcgcgctgcgc 1415067 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 caccgccgcggcggccgcca 235 |||||||||||||||||||| Sbjct: 1097700 caccgccgcggcggccgcca 1097681
>emb|X76119.1|PCTRXB Penicillium chrysogenum trxB gene Length = 1423 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 329 cgcgcgccgagctcaagcccgtgctcttcgagggctggctcgccaacgacatcgcggcgg 388 ||||||| |||||| |||| || || | ||||||| ||||||||||| | ||| || | Sbjct: 269 cgcgcgcagagctccagccagtcctttacgagggcatgctcgccaacggtaccgccgccg 328 Query: 389 gcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcatcc 448 | || |||||||| || ||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 329 gtggtcagctcacgacgaccactgacgtcgagaacttccccggattccccagcggcatcg 388 Query: 449 tcggcatcgacctcatggac 468 |||| ||| ||||||||| Sbjct: 389 gcggcgccgagctcatggac 408
>ref|XM_960162.1| Neurospora crassa OR74A THIOREDOXIN REDUCTASE (NCU08352.1) partial mRNA Length = 1005 Score = 69.9 bits (35), Expect = 8e-09 Identities = 119/147 (80%) Strand = Plus / Plus Query: 301 gccgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgag 360 ||||| ||||| || ||| ||||| ||| ||||||||||| ||||| || |||| |||| Sbjct: 37 gccgcccacactgccgccatctacctggcccgcgccgagctgaagcctgtactctacgag 96 Query: 361 ggctggctcgccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgag 420 |||| | ||||| | ||||| || || || |||||||||||||| ||||| ||||| Sbjct: 97 ggcttcatggccaatggtatcgccgccggtggccagctcaccaccacgaccgagatcgag 156 Query: 421 aacttccccggcttccccgacggcatc 447 ||||| ||||| |||||||| |||||| Sbjct: 157 aactttcccggtttccccgatggcatc 183
>ref|XM_329397.1| Neurospora crassa OR74A THIOREDOXIN REDUCTASE (NCU08352.1) partial mRNA Length = 1005 Score = 69.9 bits (35), Expect = 8e-09 Identities = 119/147 (80%) Strand = Plus / Plus Query: 301 gccgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgag 360 ||||| ||||| || ||| ||||| ||| ||||||||||| ||||| || |||| |||| Sbjct: 37 gccgcccacactgccgccatctacctggcccgcgccgagctgaagcctgtactctacgag 96 Query: 361 ggctggctcgccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgag 420 |||| | ||||| | ||||| || || || |||||||||||||| ||||| ||||| Sbjct: 97 ggcttcatggccaatggtatcgccgccggtggccagctcaccaccacgaccgagatcgag 156 Query: 421 aacttccccggcttccccgacggcatc 447 ||||| ||||| |||||||| |||||| Sbjct: 157 aactttcccggtttccccgatggcatc 183
>ref|XM_746439.1| Aspergillus fumigatus Af293 thioredoxin reductase (Afu4g12990) partial mRNA Length = 1179 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcat 446 ||||| ||||||||||| || |||||| |||||||||||||||| |||||||| ||||| Sbjct: 184 ggcggccagctcaccactacgaccgacatcgagaacttccccgggttccccgatggcat 242
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccga 440 ||||||| |||||||||| ||||||||||||||| |||| |||||||||| |||| Sbjct: 76965 cgggcggccagctcaccatcaccaccgacgtcgaaaactaccccggcttcgccga 77019
>gb|AY105128.1| Zea mays PCO155238 mRNA sequence Length = 958 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 500 ccaagatcttctccgagaccgtcacctccgtcgacttctcctcccgccccttccg 554 |||||||| || |||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 1 ccaagatcctcaccgagaccgtcaccaccgtggacttctccgcccgccccttccg 55
>ref|XM_503348.1| Yarrowia lipolytica CLIB122, YALI0D27126g predicted mRNA Length = 960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 370 gccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttcccc 429 ||||||| ||| || || ||||| ||||||||||| ||||| || | |||||||||||| Sbjct: 109 gccaacggcattgctgccggcggtcagctcaccactaccactgagattgagaacttcccc 168 Query: 430 ggcttccccgacgg 443 |||||||||||||| Sbjct: 169 ggcttccccgacgg 182
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 370 gccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttcccc 429 ||||||| ||| || || ||||| ||||||||||| ||||| || | |||||||||||| Sbjct: 3608999 gccaacggcattgctgccggcggtcagctcaccactaccactgagattgagaacttcccc 3609058 Query: 430 ggcttccccgacgg 443 |||||||||||||| Sbjct: 3609059 ggcttccccgacgg 3609072
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacg 442 ||||||| |||||||||| |||||||||||||||||| | ||| |||||| |||||| Sbjct: 4269806 cgggcggccagctcaccatcaccaccgacgtcgagaattacccgggcttcgccgacg 4269862 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggccgcc 234 |||||| ||||||||||||||||| Sbjct: 3060642 accgccgccgccgcggcggccgcc 3060619
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcatc 447 |||||||||||||||| ||||||||| |||||||||| || |||||| |||||| |||| Sbjct: 1705661 ggcgggcagctcaccatcaccaccgatgtcgagaactatccgggcttcgccgacgtcatc 1705602 Query: 448 c 448 | Sbjct: 1705601 c 1705601
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 476 gcgcgcagtccgtgcgcttcgggaccaagatcttctccgagaccgtcacctccgtcgact 535 |||| ||||| || ||||||||||||| |||| |||||||||| |||||| |||||||| Sbjct: 56701 gcgcacagtctgtacgcttcgggaccaggatcctctccgagactgtcaccgccgtcgacc 56642 Query: 536 tctcctcccgccccttc 552 |||||| |||||||| Sbjct: 56641 cctcctcgtgccccttc 56625
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 476 gcgcgcagtccgtgcgcttcgggaccaagatcttctccgagaccgtcacctccgtcgact 535 |||| ||||| || ||||||||||||| |||| |||||||||| |||||| |||||||| Sbjct: 24000 gcgcacagtctgtacgcttcgggaccaggatcctctccgagactgtcaccgccgtcgacc 23941 Query: 536 tctcctcccgccccttc 552 |||||| |||||||| Sbjct: 23940 cctcctcgtgccccttc 23924
>ref|XM_381047.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00871.1) partial mRNA Length = 993 Score = 63.9 bits (32), Expect = 5e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 307 cacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggctgg 366 |||||||| || |||||| ||| || |||||||| |||||||| |||| |||||| | Sbjct: 43 cacacggctgctgtctacttggcacgagccgagctgaagcccgttctctacgagggtttc 102 Query: 367 ctcgccaacgacatcgcggcgggcgggcagctcaccaccaccaccgacgtcgagaacttc 426 | ||||||| ||||| || ||||| || | |||||||||||||| || ||||||||| Sbjct: 103 atggccaacggtatcgccgctggcggtcaattgaccaccaccaccgaagttgagaacttc 162 Query: 427 cccggcttcccc 438 ||||| |||||| Sbjct: 163 cccggtttcccc 174
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 396 gctcaccaccaccaccgacgtcgagaacttccccggcttccccgacgg 443 |||||| ||||| || || ||||||||||||||||||||||||||||| Sbjct: 139657 gctcacgaccacgactgaggtcgagaacttccccggcttccccgacgg 139610
>emb|AJ251005.1|SCO251005 Streptomyces coelicolor arsC gene, trxB gene and arsR gene (partial) Length = 1800 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 396 gctcaccaccaccaccgacgtcgagaacttccccggcttccccgacgg 443 |||||| ||||| || || ||||||||||||||||||||||||||||| Sbjct: 918 gctcacgaccacgactgaggtcgagaacttccccggcttccccgacgg 965
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 406 accaccgacgtcgagaacttccccggcttccccgacggc 444 |||||||| || ||||||||||||||||||||||||||| Sbjct: 2575194 accaccgaggtagagaacttccccggcttccccgacggc 2575232
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 406 accaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcatg 465 ||||| || |||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct: 6007106 accacggaggtcgagaacttccccggcttccgcaacggcatcatgggccccgacctcatg 6007165 Query: 466 ga 467 || Sbjct: 6007166 ga 6007167 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 209 cgaccgccaccgccgcggcggcc 231 ||||||||||||||||||||||| Sbjct: 3943946 cgaccgccaccgccgcggcggcc 3943924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 ccgccaccgccgcggcggccg 232 ||||||||||||||||||||| Sbjct: 993290 ccgccaccgccgcggcggccg 993310 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggccgcc 234 |||||||||||||||||| ||||| Sbjct: 190066 accgccaccgccgcggcgcccgcc 190089
>gb|AE005170.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 31 of 32 of the complete genome Length = 12787 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 409 accgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctc 462 |||||||||||||||| || |||||||||||||||| || |||||| |||||| Sbjct: 3519 accgacgtcgagaactacctcggcttccccgacggcgtcggcggcatggacctc 3466
>gb|AE005144.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 5 of 32 of the complete genome Length = 10846 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 409 accgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctc 462 |||||||||||||||| || |||||||||||||||| || |||||| |||||| Sbjct: 10274 accgacgtcgagaactacctcggcttccccgacggcgtcggcggcatggacctc 10327
>dbj|D45049.1|NEUCYS9 Neurospora crassa cys-9 gene for NADPH thioredoxin reductase, complete cds Length = 2425 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 394 cagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggcatc 447 |||||||||||||| ||||| |||||||||| ||||| |||||||| |||||| Sbjct: 1339 cagctcaccaccacgaccgagatcgagaactttcccggtttccccgatggcatc 1392
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 409 accgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctc 462 |||||||||||||||| || |||||||||||||||| || |||||| |||||| Sbjct: 168393 accgacgtcgagaactacctcggcttccccgacggcgtcggcggcatggacctc 168340 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 409 accgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctc 462 |||||||||||||||| || |||||||||||||||| || |||||| |||||| Sbjct: 54996 accgacgtcgagaactacctcggcttccccgacggcgtcggcggcatggacctc 55049
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccga 440 ||||| || ||||||||||| || ||||||||||||||||| || |||||||| Sbjct: 378275 ggcggtcaactcaccaccacgactgacgtcgagaacttccctggtttccccga 378223
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacg 442 ||||||| |||||||||| |||||||||||| || || | |||||||||| |||||| Sbjct: 2678427 cgggcggccagctcaccatcaccaccgacgttgaaaattaccccggcttcgccgacg 2678483
>ref|XM_571270.1| Cryptococcus neoformans var. neoformans JEC21 thioredoxin-disulfide reductase (CNF01260) partial mRNA Length = 1695 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccga 440 ||||| || ||||||||||| || ||||||||||||||||| || |||||||| Sbjct: 543 ggcggtcaactcaccaccacgactgacgtcgagaacttccctggtttccccga 595
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || ||||||||||||||||||| ||||||||| | ||| ||| ||||| Sbjct: 5277201 caccaccgaggtggagaacttccccggcttccaggacggcatcatgggccccgagctcat 5277260 Query: 465 ggaccgctgccgcgcgcagtccgtgcgcttcgg 497 |||| | ||||||||| ||| ||||||||| Sbjct: 5277261 ggacaacatgcgcgcgcaggccgagcgcttcgg 5277293 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 gccaacggcatggaggaggcggccg 256 ||||||| ||||||||||||||||| Sbjct: 4552399 gccaacgccatggaggaggcggccg 4552375 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 gccgccgcgtccgtctccgcgacc 213 ||||||||| |||||||||||||| Sbjct: 7896307 gccgccgcgcccgtctccgcgacc 7896284 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ccgccaccgccgcggcggccgcca 235 |||||||| ||||||||||||||| Sbjct: 1022760 ccgccacctccgcggcggccgcca 1022783
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacg 442 ||||||| |||||||||| ||||||||||||||| |||| || |||||| |||||| Sbjct: 8119387 cgggcggccagctcaccatcaccaccgacgtcgaaaactatccgggcttcgccgacg 8119443
>gb|AY796185.1| Cryptococcus neoformans var. grubii thioredoxin reductase (TRR1) mRNA, complete cds Length = 1032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccga 440 ||||| || ||||||||||| || ||||||||||||||||| || |||||||| Sbjct: 124 ggcggtcaactcaccaccactactgacgtcgagaacttccctggtttccccga 176
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcccgtgct 353 ||||||||||| |||||||||||||||| ||||| |||||| | ||||||||| |||| Sbjct: 3297267 cggccccgccggctacacggcggccgtctatgcggcacgcgccaatctcaagcccctgct 3297208
>emb|X92105.1|SCTRXABGN Streptomyces coelicolor trxA and trxB gene cluster Length = 1898 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || ||||||||||||||||||| ||||||||| | ||| ||| ||||| Sbjct: 210 caccaccgaggtggagaacttccccggcttccaggacggcatcatgggccccgagctcat 269 Query: 465 ggac 468 |||| Sbjct: 270 ggac 273
>emb|AJ007313.1|SCO007313 Streptomyces coelicolor sigT, trxB and trxA genes, and ORF1 and ORF2 Length = 4026 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || ||||||||||||||||||| ||||||||| | ||| ||| ||||| Sbjct: 2746 caccaccgaggtggagaacttccccggcttccaggacggcatcatgggccccgagctcat 2805 Query: 465 ggac 468 |||| Sbjct: 2806 ggac 2809
>emb|X92104.1|SCTRXBGEN S.coelicolor trxB gene Length = 963 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || ||||||||||||||||||| ||||||||| | ||| ||| ||||| Sbjct: 135 caccaccgaggtggagaacttccccggcttccaggacggcatcatgggccccgagctcat 194 Query: 465 ggac 468 |||| Sbjct: 195 ggac 198
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || ||||||||||||||||||| ||||||||| | ||| ||| ||||| Sbjct: 54467 caccaccgaggtggagaacttccccggcttccaggacggcatcatgggccccgagctcat 54408 Query: 465 ggac 468 |||| Sbjct: 54407 ggac 54404
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaact 424 ||||||| ||||| |||||||||||||| |||||||||| Sbjct: 959405 cgggcggccagctgaccaccaccaccgaggtcgagaact 959367
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgc 335 ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 2211478 cggccccgccggctacacggcggccgtctacgcggcccgcgc 2211519
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgc 335 ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 3384936 cggccccgccggctacacggcggccgtctacgcggcccgcgc 3384977 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggc 230 |||||||||||||||||||| Sbjct: 3227742 accgccaccgccgcggcggc 3227761 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 cgccgcgcacacggcggccgtctacgcg 327 |||||||| | ||||||||||||||||| Sbjct: 2213515 cgccgcgcgcgcggcggccgtctacgcg 2213542
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttcc 436 ||||||||||| ||||||||||||||||| |||| Sbjct: 137472 accaccaccgaggtcgagaacttccccggattcc 137505 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 319 gtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 362 |||||| | |||||||| |||||| ||||| ||||||||||||| Sbjct: 137403 gtctacaccgcgcgcgctgagctccagcccctgctcttcgaggg 137446
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgc 335 ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 3126024 cggccccgccggctacacggcggccgtctacgcggcccgcgc 3126065 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggc 230 |||||||||||||||||||| Sbjct: 2957607 accgccaccgccgcggcggc 2957626 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 cgccgcgcacacggcggccgtctacgcg 327 |||||||| | ||||||||||||||||| Sbjct: 2161137 cgccgcgcgcgcggcggccgtctacgcg 2161110
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttcc 436 ||||||||||| ||||||||||||||||| |||| Sbjct: 155999 accaccaccgaggtcgagaacttccccggattcc 156032 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 gtctacgcggcgcgcgccgagctcaagcccgtgctcttcgaggg 362 |||||| | |||||||| |||||| |||| ||||||||||||| Sbjct: 155930 gtctacaccgcgcgcgctgagctcgcgcccctgctcttcgaggg 155973
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgc 335 ||||||||||| |||||||||||||||||||||| ||||| Sbjct: 1761497 cggccccgccggctacacggcggccgtctacgcggcccgcgc 1761456
>ref|NM_119711.3| Arabidopsis thaliana NTR1 AT4G35460 (NTR1) mRNA, complete cds Length = 1500 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccgg 431 |||||||||||||||||||| |||||||| Sbjct: 313 accaccaccgacgtcgagaatttccccgg 341
>gb|DQ231520.1| Streptomyces sp. FR-008 ArsR2 (arsR2), ArsO (arsO), ArsB (arsB), ArsR1 (arsR1), ArsC (arsC), and ArsT (arsT) genes, complete cds; and unknown genes Length = 7568 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 400 accaccaccaccgacgtcgagaacttccccggcttccccga 440 |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 5081 accaccacgaccgaggtggagaacttccctggcttccccga 5121
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccgg 431 |||||||||||||||||||| |||||||| Sbjct: 107117 accaccaccgacgtcgagaatttccccgg 107145
>emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J1, partial sequence (ESSA project) Length = 27408 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccgg 431 |||||||||||||||||||| |||||||| Sbjct: 8766 accaccaccgacgtcgagaatttccccgg 8794
>emb|BX826366.1|CNS0A2D8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1293 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccgg 431 |||||||||||||||||||| |||||||| Sbjct: 313 accaccaccgacgtcgagaatttccccgg 341
>gb|BT004322.1| Arabidopsis thaliana clone RAFL16-02-L06 (R50174) putative thioredoxin reductase (NADPH) 2 (At4g35460) mRNA, complete cds Length = 1433 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccgg 431 |||||||||||||||||||| |||||||| Sbjct: 230 accaccaccgacgtcgagaatttccccgg 258
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccga 440 ||||| ||||||||||| || |||||||| || |||| ||||||||| ||||| Sbjct: 3295341 ggcggccagctcaccacgacgaccgacgtggaaaactaccccggctttcccga 3295393
>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete sequence Length = 129440 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 24805 ctccgagcccgtcacctccgtcgacttc 24832
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 29192944 ctccgagcccgtcacctccgtcgacttc 29192971 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggc 230 ||||| ||||||||||||||||||| Sbjct: 35363041 ccgcggccgccaccgccgcggcggc 35363065
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 29284366 ctccgagcccgtcacctccgtcgacttc 29284393 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggc 230 ||||| ||||||||||||||||||| Sbjct: 35453113 ccgcggccgccaccgccgcggcggc 35453137
>dbj|AK112085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-C04, full insert sequence Length = 1296 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 508 ctccgagcccgtcacctccgtcgacttc 535
>dbj|AK111860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025A12, full insert sequence Length = 1349 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 568 ctccgagcccgtcacctccgtcgacttc 595
>dbj|AK105499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D02, full insert sequence Length = 1350 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||||||||| Sbjct: 527 ctccgagcccgtcacctccgtcgacttc 554
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccgccaccgccgcggcggccgcc 234 ||||||||||||||||||||||| Sbjct: 81490 ccgccaccgccgcggcggccgcc 81512
>gb|AY658578.1| Synthetic construct Peudomonas aeruginosa clone FLH033996.01F PA3382 gene, partial cds Length = 795 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 ccaccgccgcggcggccgccaacggca 241 ||||||||||||||||||||| ||||| Sbjct: 17 ccaccgccgcggcggccgccaccggca 43
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 406 accaccgacgtcgagaacttccccggcttcc 436 |||||||| || ||||||||||||||||||| Sbjct: 2451878 accaccgaggtggagaacttccccggcttcc 2451908
>emb|Z21946.1|SCTRXABA S.clavuligerus trxB gene encoding thioredoxin reductase and trxA gene encoding thioredoxin Length = 1806 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacgg 443 ||||||||| || |||||||||||||| |||| |||||| Sbjct: 478 caccaccgatgtggagaacttccccgggttccgcgacgg 516
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 ccgccaccgccgcggcggccgcc 234 ||||||||||||||||||||||| Sbjct: 16582751 ccgccaccgccgcggcggccgcc 16582773 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctccgcgaccgc 215 |||||||||| |||||||||||| |||| Sbjct: 6335205 ccgccgccgcctccgtctccgcggccgc 6335178
>gb|AE004759.1| Pseudomonas aeruginosa PAO1, section 320 of 529 of the complete genome Length = 14309 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 ccaccgccgcggcggccgccaacggca 241 ||||||||||||||||||||| ||||| Sbjct: 12123 ccaccgccgcggcggccgccaccggca 12097
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 gtcgagaacttccccggcttccc 437 ||||||||||||||||||||||| Sbjct: 1007623 gtcgagaacttccccggcttccc 1007645
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 cgtcgagaacttccccggcttccccg 439 |||||||| ||||||||||||||||| Sbjct: 421446 cgtcgagatcttccccggcttccccg 421471
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 cgtcgagaacttccccggcttccccg 439 |||||||| ||||||||||||||||| Sbjct: 1589083 cgtcgagatcttccccggcttccccg 1589058
>gb|AF030453.1| Homo sapiens chromosome 7 clone PAC 76h2 map 7q22, complete sequence Length = 125108 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 8757 ctccgcgaccgccaccgccgcg 8778
>gb|AF024533.1| Homo sapiens cosmid 123E15, complete sequence Length = 84912 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 1603 ctccgcgaccgccaccgccgcg 1582
>ref|XM_363358.1| Magnaporthe grisea 70-15 hypothetical protein (MG01284.4) partial mRNA Length = 1050 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Plus Query: 385 gcgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttcccc 438 ||||| || ||||| ||||| ||||| ||||| ||||||||||| || |||||| Sbjct: 34 gcgggtggccagctgaccacgaccacggacgtggagaacttccctggtttcccc 87
>gb|BC066592.1| Homo sapiens cut-like 1, CCAAT displacement protein (Drosophila), mRNA (cDNA clone MGC:75164 IMAGE:5740343), complete cds Length = 5164 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 4271 ctccgcgaccgccaccgccgcg 4292
>gb|AC005088.3| Homo sapiens BAC clone CTA-313A17 from 7, complete sequence Length = 158663 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 43686 ctccgcgaccgccaccgccgcg 43707
>ref|NM_181552.1| Homo sapiens cut-like 1, CCAAT displacement protein (Drosophila) (CUTL1), transcript variant 1, mRNA Length = 5379 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 4261 ctccgcgaccgccaccgccgcg 4282
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 cccgccgcgcacacggcggccg 319 |||||||||||||||||||||| Sbjct: 25672 cccgccgcgcacacggcggccg 25693
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cccgccgcgcacacggcggccg 319 |||||||||||||||||||||| Sbjct: 257238 cccgccgcgcacacggcggccg 257217
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 tccgtctccgcgaccgccaccgccgc 224 ||||||||||| |||||||||||||| Sbjct: 22953 tccgtctccgccaccgccaccgccgc 22928
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaacttccccggcttccccgacggca 445 |||||||||| || | ||||||||||| || |||||||| || ||||| ||||| |||| Sbjct: 2905092 cgggcgggcaactgatgaccaccaccgaggtggagaactttccgggctttcccgagggca 2905151 Query: 446 tc 447 || Sbjct: 2905152 tc 2905153
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 191 ccgccgcgtccgtctccgcgaccgccaccgccgc 224 |||||||||| | ||||||| ||||||||||||| Sbjct: 75654 ccgccgcgtcggcctccgcggccgccaccgccgc 75687 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 caccgccgcggcggccgcca 235 |||||||||||||||||||| Sbjct: 43131 caccgccgcggcggccgcca 43112
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 accaccgacgtcgagaacttccccggcttccccgacggcatc 447 |||||||| || |||||||||||||| |||| ||||||||| Sbjct: 3134928 accaccgatgtggagaacttccccggtttccaggacggcatc 3134969 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Plus Query: 294 cggccccgccgcgcacacggcggccgtctacgcggcgcgcgccgagctcaagcc 347 ||||||||||| |||| |||||| ||||||| ||||| ||||| |||||||| Sbjct: 3134831 cggccccgccggatacaccgcggccatctacgccgcgcgtgccgatctcaagcc 3134884
>gb|M74099.1|HUMCDP Human displacement protein (CCAAT) mRNA Length = 5376 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcg 225 |||||||||||||||||||||| Sbjct: 4261 ctccgcgaccgccaccgccgcg 4282
>ref|NM_115315.2| Arabidopsis thaliana structural constituent of cell wall AT3G54580 mRNA, complete cds Length = 3095 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cagctcaccaccaccaccgac 414 ||||||||||||||||||||| Sbjct: 231 cagctcaccaccaccaccgac 251
>ref|XM_465308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgc 233 |||||||||||||| | ||||| | || |||||||||||||||| Sbjct: 381 cgccgccgcgtccgccgccgcgttcacctccgccgcggcggccgc 337
>ref|NM_189725.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 ccgtcgacttctcctcccgcc 547 ||||||||||||||||||||| Sbjct: 215 ccgtcgacttctcctcccgcc 235
>ref|XM_470408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1845 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggc 230 ||||| ||||||||||||||||||| Sbjct: 55 ccgcggccgccaccgccgcggcggc 31
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 gcatcctcggcatcgacctcatggaccgc 471 |||||||||||||||||||| || ||||| Sbjct: 466822 gcatcctcggcatcgacctcctgaaccgc 466794 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggc 230 |||||||||||||||||||| Sbjct: 1532717 accgccaccgccgcggcggc 1532698
>ref|XM_418403.1| PREDICTED: Gallus gallus similar to Zinc finger transcription factor Trps1 (Zinc finger protein GC79) (Tricho-rhino-phalangeal syndrome type I protein) (LOC420290), mRNA Length = 3500 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcggcggccgccaa 236 |||||| |||||| ||||| ||||||||||||| Sbjct: 2256 ctccgccaccgccgccgccacggcggccgccaa 2288
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cgggcagctcaccaccaccaccgac 414 ||||||||||||||||| ||||||| Sbjct: 665170 cgggcagctcaccaccagcaccgac 665146
>emb|AL391361.18| Human DNA sequence from clone RP11-235G24 on chromosome 6 Contains a novel gene, a pseudogene similar to lipoproteins (contains kringle domains), a novel gene and part of a novel gene, complete sequence Length = 99162 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ggcggccgcgggcccgctgcg 269 ||||||||||||||||||||| Sbjct: 97309 ggcggccgcgggcccgctgcg 97289
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cgtctacgcggcgcgcgccga 338 ||||||||||||||||||||| Sbjct: 3345841 cgtctacgcggcgcgcgccga 3345821 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcg 225 |||||||||||||||||||| Sbjct: 1079439 ccgcgaccgccaccgccgcg 1079420
>emb|BX248361.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 8/8 Length = 53793 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttccccgacggcatc 447 ||||||||||| || || |||||||| || |||||||| |||||| Sbjct: 45612 accaccaccgaggtagaaaacttcccaggtttccccgagggcatc 45656
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 416 tcgagaacttccccggcttccccgacggc 444 ||||||||| || |||||||||||||||| Sbjct: 44247 tcgagaactacctcggcttccccgacggc 44219
>emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, BAC clone T14E10 Length = 94911 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 cagctcaccaccaccaccgac 414 ||||||||||||||||||||| Sbjct: 72280 cagctcaccaccaccaccgac 72260
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 439 gacggcatcctcggcatcgacctca 463 ||||||||| ||||||||||||||| Sbjct: 3769642 gacggcatcgtcggcatcgacctca 3769666 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 313 gcggccgtctacgcggcgcgcgccgagctcaagcccgtgct 353 |||||| ||||||||||||||||| | ||| ||||| |||| Sbjct: 715357 gcggccatctacgcggcgcgcgccaatctcgagcccatgct 715317
>gb|AF418548.1|AF418548 Mycobacterium avium subsp. paratuberculosis thioredoxin reductase (trxB), thioredoxin (trxA), and N-acetylmuramoyl-l-alanine amidase (cwlM) genes, complete cds; and ParA (parA) gene, partial cds Length = 4900 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttccccgacgg 443 ||||||||||| || ||||||| |||||| |||| |||||| Sbjct: 496 accaccaccgaggtggagaactaccccggtttccgcgacgg 536
>emb|CR352830.1| Gallus gallus finished cDNA, clone ChEST124g22 Length = 1303 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccgcggcggccgccaa 236 |||||| |||||| ||||| ||||||||||||| Sbjct: 48 ctccgccaccgccgccgccacggcggccgccaa 80
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cgccaccgccgcggcggccgc 233 ||||||||||||||||||||| Sbjct: 22044598 cgccaccgccgcggcggccgc 22044578 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 199 tccgtctccgcgaccgccaccgccgcggcggccgcc 234 |||| |||||| |||||||||||||| || |||||| Sbjct: 26711842 tccgcctccgccaccgccaccgccgccgccgccgcc 26711877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 19948173 ccgccgccgcgtccgtctcc 19948154 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 14930449 ccgccgccgcgtccgtctcc 14930468
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 ccgtcgacttctcctcccgcc 547 ||||||||||||||||||||| Sbjct: 41388274 ccgtcgacttctcctcccgcc 41388254 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 21042698 gccaccgccgcggcggccgc 21042717 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccaccgccgccgcgtccgtctccg 208 |||||||||||||||||| ||||| Sbjct: 15544851 ccaccgccgccgcgtccgactccg 15544828
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggc 230 ||||| ||||||||||||||||||| Sbjct: 5413 ccgcggccgccaccgccgcggcggc 5389
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 ccgtcgacttctcctcccgcc 547 ||||||||||||||||||||| Sbjct: 79767 ccgtcgacttctcctcccgcc 79747
>gb|AE004690.1| Pseudomonas aeruginosa PAO1, section 251 of 529 of the complete genome Length = 10325 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 388 ggcgggcagctcaccaccaccaccgacgtcgagaact 424 ||||| ||||| |||||||||||||| ||||| |||| Sbjct: 4862 ggcggccagctgaccaccaccaccgaagtcgacaact 4898
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggc 230 ||||| ||||||||||||||||||| Sbjct: 124585 ccgcggccgccaccgccgcggcggc 124561
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 gcggccgtctacgcggcgcgcgccg 337 ||||||| ||||||||||||||||| Sbjct: 2990174 gcggccgcctacgcggcgcgcgccg 2990150
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 ccgcgtccgtctccgcgaccgccaccgcc 222 |||| |||| ||||||||||||||||||| Sbjct: 27440 ccgcctccgcctccgcgaccgccaccgcc 27468
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 ccgcgtccgtctccgcgaccgccaccgcc 222 |||| |||| ||||||||||||||||||| Sbjct: 117783 ccgcctccgcctccgcgaccgccaccgcc 117811
>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0622F08 Length = 140628 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 189 cgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgc 233 |||||||||||||| | ||||| | || |||||||||||||||| Sbjct: 108620 cgccgccgcgtccgccgccgcgttcacctccgccgcggcggccgc 108664
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 189 cgccgccgcgtccgtctccgcgaccgccaccgccgcggcggccgc 233 |||||||||||||| | ||||| | || |||||||||||||||| Sbjct: 25944 cgccgccgcgtccgccgccgcgttcacctccgccgcggcggccgc 25988
>dbj|AK063265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A12, full insert sequence Length = 1465 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 ccgtcgacttctcctcccgcc 547 ||||||||||||||||||||| Sbjct: 289 ccgtcgacttctcctcccgcc 309
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 cgtctacgcggcgcgcgccgagctc 342 |||| |||||||||||||||||||| Sbjct: 282890 cgtcgacgcggcgcgcgccgagctc 282914
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 384 ggcgggcgggcagctcaccaccaccaccgacgtcgagaact 424 |||||| || ||||| |||||||||||||| ||||| |||| Sbjct: 901726 ggcgggtggccagctgaccaccaccaccgaagtcgacaact 901766
>gb|AY673057.1| Marantochloa purpurea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 862 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 gacacggcccggcccgacgac 59 ||||||||||||||||||||| Sbjct: 103 gacacggcccggcccgacgac 83
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttccccgacgg 443 ||||||||||| || ||||||| |||||| |||| |||||| Sbjct: 4820070 accaccaccgaggtggagaactaccccggtttccgcgacgg 4820110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gccaccgccgcggcggccgcc 234 ||||||||||||||||||||| Sbjct: 2567818 gccaccgccgcggcggccgcc 2567838 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcg 225 |||||||||||||||||||| Sbjct: 4665055 ccgcgaccgccaccgccgcg 4665036 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 ctcggcatcgacctcatggaccgc 471 ||||||||||||||||| |||||| Sbjct: 877679 ctcggcatcgacctcatcgaccgc 877656 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccgccgcggcggccgccaac 237 |||||||||||||||||||| Sbjct: 169823 ccgccgcggcggccgccaac 169842
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cgccaccgccgcggcggccgc 233 ||||||||||||||||||||| Sbjct: 21972943 cgccaccgccgcggcggccgc 21972923 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 199 tccgtctccgcgaccgccaccgccgcggcggccgcc 234 |||| |||||| |||||||||||||| || |||||| Sbjct: 26640012 tccgcctccgccaccgccaccgccgccgccgccgcc 26640047 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 19874387 ccgccgccgcgtccgtctcc 19874368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 14884732 ccgccgccgcgtccgtctcc 14884751
>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69648 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cgccaccgccgcggcggccgc 233 ||||||||||||||||||||| Sbjct: 14800 cgccaccgccgcggcggccgc 14780
>ref|XM_476127.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctccgcgaccgc 215 |||||||||| |||||||||||| |||| Sbjct: 11 ccgccgccgcctccgtctccgcggccgc 38
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 386 cgggcgggcagctcaccaccaccaccgacgtcgagaactt 425 |||||||||| |||| ||||| ||| ||||||||||||| Sbjct: 689804 cgggcgggcaactcatgaccacgacccacgtcgagaactt 689765
>gb|AY145410.1| Histioteuthis sp. YJP-2002 28S ribosomal RNA gene, partial sequence Length = 3604 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcgcctctgctccaagctcgccgc 152 ||||||||||||||| |||||||| Sbjct: 626 gcgcctctgctccaacctcgccgc 649
>ref|XM_468193.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 59 ccgccaccgccaccgccgcggccgccgc 86
>ref|XM_507018.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.35 mRNA Length = 1394 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 64 ccgccaccgccaccgccgcggccgccgc 91
>ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 gcgaccgccaccgccgcggcggcc 231 ||||||||| |||||||||||||| Sbjct: 130 gcgaccgccgccgccgcggcggcc 107
>ref|NM_193875.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 516 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccaccgccgccgcgtccgtctccg 208 |||||||||||||||||| ||||| Sbjct: 82 ccaccgccgccgcgtccgactccg 59
>ref|NM_193466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 432 gccaccgccgcggcggccgc 413
>ref|XM_478782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||| ||||| Sbjct: 522 ctccgagcccgtcacctccgtccacttc 549
>ref|XM_476383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 821 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 198 tcaccaccaccaccgacgtc 179
>ref|XM_476382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 779 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 463 tcaccaccaccaccgacgtc 482
>ref|NM_019371.1| Rattus norvegicus EGL nine homolog 3 (C. elegans) (Egln3), mRNA Length = 2825 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 257 gccaccgccgcggcggccgc 238
>gb|AY023136.1| Oryza sativa microsatellite MRG5461 containing (GCC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 59 gccaccgccgcggcggccgc 40
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 10117 ccgccgccgcgtccgtctcc 10136
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 86499 ccgccgccgcgtccgtctcc 86480
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctccgcgaccgc 215 |||||||||| |||||||||||| |||| Sbjct: 36944 ccgccgccgcctccgtctccgcggccgc 36917
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 403 accaccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctc 462 ||||||||||| || || |||| |||||| |||||||||| | ||||| ||||||| Sbjct: 518911 accaccaccgaggtggacaactggcccggcgaccccgacggcgtgctcggtcccgacctc 518970 Query: 463 atggaccg 470 |||||||| Sbjct: 518971 atggaccg 518978
>ref|XM_323563.1| Neurospora crassa OR74A predicted protein (NCU04224.1) partial mRNA Length = 1353 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccg 223 |||||||||||||||||||| Sbjct: 577 ctccgcgaccgccaccgccg 596
>ref|XM_955755.1| Neurospora crassa OR74A hypothetical protein (NCU04224.1) partial mRNA Length = 1353 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccg 223 |||||||||||||||||||| Sbjct: 577 ctccgcgaccgccaccgccg 596
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctccgcgaccgc 215 |||||||||| |||||||||||| |||| Sbjct: 165560 ccgccgccgcctccgtctccgcggccgc 165533
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 acgcggcgcgcgccgagctc 342 |||||||||||||||||||| Sbjct: 2809937 acgcggcgcgcgccgagctc 2809918
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agccaccgccgccgcgtccg 202 |||||||||||||||||||| Sbjct: 1169542 agccaccgccgccgcgtccg 1169561
>gb|AC142405.4| Mus musculus BAC clone RP24-559P3 from chromosome 5, complete sequence Length = 144109 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggcagctcaccaccaccacc 411 |||||||||||||||||||| Sbjct: 142024 ggcagctcaccaccaccacc 142005
>gb|AF537033.1| Phalaenopsis violacea KDAIS KC-16 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 670 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcggcagccaccgccgccgc 197 |||||||||||||||||||| Sbjct: 68 gcggcagccaccgccgccgc 49
>emb|CR712462.2|CNS0GCOQ Tetraodon nigroviridis full-length cDNA Length = 636 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cagccaccgccgccgcgtccgtctccgc 209 |||| ||||||||||||||||| ||||| Sbjct: 235 cagcgaccgccgccgcgtccgtgtccgc 262
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 acacggcggccgtctacgcggcgcgcgc 335 ||||||| || ||||||||||||||||| Sbjct: 1127816 acacggcagcggtctacgcggcgcgcgc 1127789
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 acggcatggaggaggcggcc 255 |||||||||||||||||||| Sbjct: 19875 acggcatggaggaggcggcc 19856
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 405 caccaccgacgtcgagaacttccccggcttccccgacggcatcctcggcatcgacctcat 464 ||||||||| || |||||||||||||| || || ||||| ||| | ||| ||| ||||| Sbjct: 3634715 caccaccgaggtggagaacttccccggttttccggacgggatcatgggccccgagctcat 3634774 Query: 465 ggac 468 |||| Sbjct: 3634775 ggac 3634778 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 gcggcagccaccgccgccgcgtcc 201 |||||||||||||| ||||||||| Sbjct: 3314772 gcggcagccaccgcggccgcgtcc 3314749
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 acgcggcgcgcgccgagctc 342 |||||||||||||||||||| Sbjct: 992162 acgcggcgcgcgccgagctc 992143
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccaccgccgccgcgtccgtc 204 |||||||||||||||||||| Sbjct: 26233 ccaccgccgccgcgtccgtc 26252
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cgccaccgccgcggcggccg 232 |||||||||||||||||||| Sbjct: 13805 cgccaccgccgcggcggccg 13786
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccg 223 |||||||||||||||||||| Sbjct: 32050 ctccgcgaccgccaccgccg 32069
>emb|AL807368.1|NC62D11 Neurospora crassa DNA linkage group V cosmid contig 62D11 Length = 102165 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctccgcgaccgccaccgccg 223 |||||||||||||||||||| Sbjct: 96731 ctccgcgaccgccaccgccg 96750
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 119034 ccgccgccgcgtccgtctcc 119053
>gb|AF226003.1| Riccia papulosa 26S ribosomal RNA gene, partial sequence Length = 1000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 ttccccggcttccccgacggcatc 447 |||| ||||||||||||||||||| Sbjct: 524 ttcctcggcttccccgacggcatc 501
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 acgcggcgcgcgccgagctc 342 |||||||||||||||||||| Sbjct: 1491046 acgcggcgcgcgccgagctc 1491065
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 11808386 ccgccgccgcgtccgtctcc 11808405
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 18232136 ccgccgccgcgtccgtctcc 18232117
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 gcagctcaccaccaccaccg 412 |||||||||||||||||||| Sbjct: 22491331 gcagctcaccaccaccaccg 22491312 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccgccgcggcggccgcc 234 |||||||||||||||||||| Sbjct: 2331027 ccaccgccgcggcggccgcc 2331046
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||| ||||| Sbjct: 23038930 ctccgagcccgtcacctccgtccacttc 23038957 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 383548 tcaccaccaccaccgacgtc 383529
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cgcgaccgccaccgccgcggcggc 230 |||||||||| ||||||||||||| Sbjct: 68646 cgcgaccgccgccgccgcggcggc 68623
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 10243 gccaccgccgcggcggccgc 10262
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 105900 gccaccgccgcggcggccgc 105919
>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence Length = 192732 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cgcggcgggcgggcagctca 400 |||||||||||||||||||| Sbjct: 86190 cgcggcgggcgggcagctca 86209
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 205 tccgcgaccgccaccgccgcggcggccg 232 ||||||||||| |||||| ||||||||| Sbjct: 2753901 tccgcgaccgcgaccgcctcggcggccg 2753928
>ref|XM_579438.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_019371 (LOC497816), mRNA Length = 2817 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 253 gccaccgccgcggcggccgc 234
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 ccgccaccgccgcggcggccgcca 235 ||||| |||||||||||||||||| Sbjct: 720026 ccgcctccgccgcggcggccgcca 720003
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccgccgcggcggccgcc 234 |||||||||||||||||||| Sbjct: 9437 ccaccgccgcggcggccgcc 9456
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccaccgccgccgcgtccgtctccg 208 |||||||||||||||||| ||||| Sbjct: 102360 ccaccgccgccgcgtccgactccg 102337
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 gcagctcaccaccaccaccg 412 |||||||||||||||||||| Sbjct: 6532 gcagctcaccaccaccaccg 6513
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 81171 accgccaccgccgcggccgccgcc 81148
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 107786 tcaccaccaccaccgacgtc 107767
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||| ||||| Sbjct: 114144 ctccgagcccgtcacctccgtccacttc 114171
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 135547 tcaccaccaccaccgacgtc 135528
>dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0433B06 Length = 126258 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccgccgcggcggccgcc 234 |||||||||||||||||||| Sbjct: 70066 ccaccgccgcggcggccgcc 70085
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 accgccgccgcgtccgtctccgcgaccg 214 ||||||||||| |||| ||||||||||| Sbjct: 66969 accgccgccgcctccgcctccgcgaccg 66942
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 139840 ccgccaccgccaccgccgcggccgccgc 139813
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 136774 accgccaccgccgcggccgccgcc 136751
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 35636 ccgccaccgccaccgccgcggccgccgc 35609
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gcgaccgccaccgccgcggcggcc 231 ||||||||| |||||||||||||| Sbjct: 123093 gcgaccgccgccgccgcggcggcc 123116
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gcgaccgccaccgccgcggcggcc 231 ||||||||| |||||||||||||| Sbjct: 12320 gcgaccgccgccgccgcggcggcc 12343
>dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H05, full insert sequence Length = 2628 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 gcgaccgccaccgccgcggcggcc 231 ||||||||| |||||||||||||| Sbjct: 130 gcgaccgccgccgccgcggcggcc 107
>dbj|AK111653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133P16, full insert sequence Length = 1344 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 ctccgagaccgtcacctccgtcgacttc 537 ||||||| |||||||||||||| ||||| Sbjct: 619 ctccgagcccgtcacctccgtccacttc 646
>dbj|AK108599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E06, full insert sequence Length = 1438 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 53 ccgccgccgcgtccgtctcc 34
>dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F12, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gcagctcaccaccaccaccg 412 |||||||||||||||||||| Sbjct: 508 gcagctcaccaccaccaccg 527
>dbj|AK073210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005C22, full insert sequence Length = 909 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ccgcgaccgccaccgccgcggcggccgc 233 |||| ||||||||||||||||| ||||| Sbjct: 59 ccgccaccgccaccgccgcggccgccgc 86
>dbj|AK070086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040E15, full insert sequence Length = 2100 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 1582 accgccaccgccgcggccgccgcc 1605
>dbj|AK065027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G12, full insert sequence Length = 779 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 463 tcaccaccaccaccgacgtc 482
>dbj|AK063386.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G09, full insert sequence Length = 2760 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||||| |||||| Sbjct: 1393 accgccaccgccgcggccgccgcc 1416
>dbj|AK062751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-G03, full insert sequence Length = 820 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcaccaccaccaccgacgtc 417 |||||||||||||||||||| Sbjct: 199 tcaccaccaccaccgacgtc 180
>gb|AC118926.13| Mus musculus chromosome 5, clone RP23-323D23, complete sequence Length = 232698 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggcagctcaccaccaccacc 411 |||||||||||||||||||| Sbjct: 57872 ggcagctcaccaccaccacc 57853
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 accgccaccgccgcggcggccgcc 234 ||||||||||||||| |||||||| Sbjct: 1824871 accgccaccgccgcgccggccgcc 1824894
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgccgcggcggccgccaacggca 241 |||||||||||| ||||||||||| Sbjct: 2220474 ccgccgcggcggtcgccaacggca 2220451
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 aacttccccggcttccccga 440 |||||||||||||||||||| Sbjct: 2005127 aacttccccggcttccccga 2005108
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 18241389 ccgccgccgcgtccgtctcc 18241370
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 11886797 ccgccgccgcgtccgtctcc 11886816
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 199 tccgtctccgcgaccgccaccgccgcggcggccgcc 234 |||| |||||| |||||||||||||| || |||||| Sbjct: 59282 tccgcctccgccaccgccaccgccgccgccgccgcc 59247
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 151398 ccgccgccgcgtccgtctcc 151379
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgccgccgcgtccgtctcc 207 |||||||||||||||||||| Sbjct: 79087 ccgccgccgcgtccgtctcc 79106
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 199 tccgtctccgcgaccgccaccgccgcggcggccgcc 234 |||| |||||| |||||||||||||| || |||||| Sbjct: 87136 tccgcctccgccaccgccaccgccgccgccgccgcc 87101
>gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromosome unknown, complete sequence Length = 224974 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 gccaccgccgccgcgtccgtctcc 207 |||||||||||||||||| ||||| Sbjct: 160352 gccaccgccgccgcgtccctctcc 160375
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 acggcatggaggaggcggcc 255 |||||||||||||||||||| Sbjct: 69888 acggcatggaggaggcggcc 69907
>emb|AJ291309.1|OCU291309 Oryctolagus cuniculus partial mRNA for eHAND basic helix-loop-helix transcription factor (eHAND gene) Length = 660 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccgccgcggcggccgcc 234 |||||||||||||||||||| Sbjct: 197 ccaccgccgcggcggccgcc 216
>gb|M24638.1|BOVMARCKS Bovine 80-87 kd myristoylated alanine-rich C kinase substrate (MARCKS) protein gene, complete cds Length = 4363 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 cgcgcgcagtccgtgcgcttcggg 498 |||||||||||| ||||||||||| Sbjct: 1753 cgcgcgcagtccatgcgcttcggg 1776
>gb|U06713.1|RNU06713 Rattus norvegicus Sprague-Dawley SM-20 mRNA, complete cds Length = 2825 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gccaccgccgcggcggccgc 233 |||||||||||||||||||| Sbjct: 257 gccaccgccgcggcggccgc 238
>dbj|AB070956.1| Streptomyces avermitilis peptide-7 biosynthetic gene cluster Length = 54101 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ccgccaccgccgcggcggccgcca 235 |||||||| ||||||||||||||| Sbjct: 34592 ccgccacctccgcggcggccgcca 34615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,672,669 Number of Sequences: 3902068 Number of extensions: 3672669 Number of successful extensions: 134331 Number of sequences better than 10.0: 214 Number of HSP's better than 10.0 without gapping: 236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118797 Number of HSP's gapped (non-prelim): 15525 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
