ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 121 ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 180 ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | Sbjct: 862 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 803 Query: 181 tcctcgtcggcgccatcgc 199 || | ||||||||| |||| Sbjct: 802 tcgttgtcggcgccgtcgc 784
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 255 cgcaccgcctcgaccgtcgtgctggagagcctgcgttccgtctccaacttccccttcca 313 |||||||| |||||||| ||| ||||||| || || |||||| |||||||||||||||| Sbjct: 19199694 cgcaccgcgtcgaccgttgtgatggagaggctccggtccgtcgccaacttccccttcca 19199752 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 121 ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 180 ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | Sbjct: 19178975 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 19178916 Query: 181 tcctcgtcggcgccatcgc 199 || | ||||||||| |||| Sbjct: 19178915 tcgttgtcggcgccgtcgc 19178897
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 255 cgcaccgcctcgaccgtcgtgctggagagcctgcgttccgtctccaacttccccttcca 313 |||||||| |||||||| ||| ||||||| || || |||||| |||||||||||||||| Sbjct: 122059 cgcaccgcgtcgaccgttgtgatggagaggctccggtccgtcgccaacttccccttcca 122117 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 121 ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 180 ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | Sbjct: 101340 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 101281 Query: 181 tcctcgtcggcgccatcgc 199 || | ||||||||| |||| Sbjct: 101280 tcgttgtcggcgccgtcgc 101262
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gggccagaaccggccgcccggcgc 245 |||||||||||||||||||||||| Sbjct: 3951764 gggccagaaccggccgcccggcgc 3951787
>ref|XM_788149.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7334-PA, isoform A (LOC588467), mRNA Length = 2202 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcggc 191 ||||||||||||||||| |||||||| Sbjct: 215 tcatcctcttcaacctcgtcgtcggc 190
>dbj|AB112586.1| Streptomyces sp. WA46 genes for salicylate degradation related proteins, complete cds Length = 27521 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 cgatgtcgccgtggctgagcccgggc 155 ||||||||||||||| |||||||||| Sbjct: 3368 cgatgtcgccgtggcggagcccgggc 3393
>ref|XM_822847.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.2060) partial mRNA Length = 3312 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ttcatcctcttcaacctcctcgtcg 189 ||||||||||||| ||||||||||| Sbjct: 1227 ttcatcctcttcatcctcctcgtcg 1203
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 atcgcgctcatgtcgtcgtcg 215 ||||||||||||||||||||| Sbjct: 1081549 atcgcgctcatgtcgtcgtcg 1081569
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 cgttcatcctcttcaacctcc 183 ||||||||||||||||||||| Sbjct: 727990 cgttcatcctcttcaacctcc 727970
>ref|XM_481849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 catcctcttcaacctcctcgtcgg 190 |||||||||||||||||| ||||| Sbjct: 442 catcctcttcaacctccttgtcgg 419
>ref|XM_474146.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1890 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 45 cgtgctctgcgccggcggcg 26
>ref|NM_196105.1| Oryza sativa (japonica cultivar-group) putative protein phosphatase 2C (OJ1003C07.6), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 222 gtcgtcgtcgtcccgggggc 203
>gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93599 IMAGE:7132958), complete cds Length = 2256 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 647 tcatcctcttcatcctcctcgtcg 624
>gb|DQ021908.1| Triticum aestivum DRE binding factor (DBF) mRNA, complete cds Length = 999 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gtcgcagctccaccacgtgc 375 |||||||||||||||||||| Sbjct: 279 gtcgcagctccaccacgtgc 298
>gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:72533 IMAGE:5623285), complete cds Length = 1214 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 635 tcatcctcttcatcctcctcgtcg 612
>gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome Length = 25260 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tcctcttcaacctcctcgtc 188 |||||||||||||||||||| Sbjct: 23563 tcctcttcaacctcctcgtc 23582
>emb|AL772208.4| Human DNA sequence from clone RP6-29F5 on chromosome X Contains the 3' end of a novel gene (FLJ35046, FLJ34279, FLJ38843, FLJ33130, DKFZp667C011) and two CpG islands, complete sequence Length = 40735 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gcgggaggcgagcagggtgg 432 |||||||||||||||||||| Sbjct: 16963 gcgggaggcgagcagggtgg 16944
>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3 Contains the 3' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, the 3' end of a novel gene, a novel gene for a protein similar to ribosomal protein 26, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 179804 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gtctccaacttccccttcca 313 |||||||||||||||||||| Sbjct: 136854 gtctccaacttccccttcca 136873
>emb|X72382.1|RCNIFR3 R.capsulatus nifR3 DNA Length = 5847 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagaaccggccgcccggc 243 |||||||||||||||||||| Sbjct: 1318 gccagaaccggccgcccggc 1337
>emb|X12359.1|RCNIFR12 Rhodobacter capsulatus nifR1 and nifR2 gene Length = 8030 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagaaccggccgcccggc 243 |||||||||||||||||||| Sbjct: 3510 gccagaaccggccgcccggc 3529
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 26522 cgtgctctgcgccggcggcg 26541
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagagcaagaagatcaggaggag 87 ||||||||||||||| |||||||| Sbjct: 4321 gcagagcaagaagatgaggaggag 4298
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tgctggagagcctgcgttcc 293 |||||||||||||||||||| Sbjct: 3282644 tgctggagagcctgcgttcc 3282625
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 accggccgcccggcgcaggc 249 |||||||||||||||||||| Sbjct: 714632 accggccgcccggcgcaggc 714651
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 40693 gtcgtcgtcgtcccgggggc 40674
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcgtcggcgccatcgcgctc 203 |||||||||||||||||||| Sbjct: 2868741 tcgtcggcgccatcgcgctc 2868760
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagagcaagaagatcaggaggag 87 ||||||||||||||| |||||||| Sbjct: 35379518 gcagagcaagaagatgaggaggag 35379495 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 33254261 cgtgctctgcgccggcggcg 33254280
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 11118364 gtcgtcgtcgtcccgggggc 11118383
>gb|AY035806.1|Y035786S21 Homo sapiens propionyl-CoA carboxylase alpha polypeptide precursor (PCCA) gene, exon 22 Length = 318 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gtctccaacttccccttcca 313 |||||||||||||||||||| Sbjct: 258 gtctccaacttccccttcca 277
>ref|XM_573095.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC497907), mRNA Length = 1297 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 710 tcatcctcttcatcctcctcgtcg 687
>ref|XM_575891.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC500530), mRNA Length = 1226 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 713 tcatcctcttcatcctcctcgtcg 690
>ref|XM_345376.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC366086), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 1355 tcatcctcttcatcctcctcgtcg 1332
>ref|XM_574476.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (LOC499183), mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 722 tcatcctcttcatcctcctcgtcg 699
>ref|XM_574383.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC499092), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 691 tcatcctcttcatcctcctcgtcg 668
>gb|AF275734.1|AF275734 Rattus norvegicus amphoterin mRNA, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 679 tcatcctcttcatcctcctcgtcg 656
>dbj|AB125306.1| Oryza sativa (japonica cultivar-group) SAPK5 mRNA for serine/threonine protein kinase SAPK5, complete cds Length = 1604 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagagcaagaagatcaggaggag 87 ||||||||||||||| |||||||| Sbjct: 25 gcagagcaagaagatgaggaggag 2
>gb|L49336.1|CLOABG Clostridium longisporum methyl-accepting chemotaxis protein (macA) gene, partial cds; and tryptophanyl-tRNA synthetase (trsA), regulatory protein (abgG), PTS-dependent enzyme II (abgF), phospho-beta-glucosidase (abgA), ORF; putative, and PII-like protein genes, complete cds Length = 7518 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ttccgtctccaacttcccct 309 |||||||||||||||||||| Sbjct: 7125 ttccgtctccaacttcccct 7106
>dbj|AK107225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D09, full insert sequence Length = 1297 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 218 cgtgctctgcgccggcggcg 199
>dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A04, full insert sequence Length = 2181 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 215 cgtgctctgcgccggcggcg 196
>dbj|AK100269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065E10, full insert sequence Length = 1636 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagagcaagaagatcaggaggag 87 ||||||||||||||| |||||||| Sbjct: 57 gcagagcaagaagatgaggaggag 34
>dbj|AK100049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155A10, full insert sequence Length = 1876 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 280 gtcgtcgtcgtcccgggggc 261
>dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I19, full insert sequence Length = 2338 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 221 cgtgctctgcgccggcggcg 202
>dbj|AK071987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J19, full insert sequence Length = 1857 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 341 gtcgtcgtcgtcccgggggc 322
>gb|U70376.2|U70376 Streptomyces flavopersicus spectinomycin biosynthesis gene cluster, complete sequence Length = 29606 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctcgtccgcaccgcctcga 267 |||||||||||||||||||| Sbjct: 17073 gctcgtccgcaccgcctcga 17054
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagagcaagaagatcaggaggag 87 ||||||||||||||| |||||||| Sbjct: 11325 gcagagcaagaagatgaggaggag 11302
>emb|Y00463.1|RNHMG1 Rat mRNA for high mobility group protein HMG1 Length = 825 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 617 tcatcctcttcatcctcctcgtcg 594
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gtcgtcgtcgtcccgggggc 225 |||||||||||||||||||| Sbjct: 11124804 gtcgtcgtcgtcccgggggc 11124823
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgtgctctgcgccggcggcg 356 |||||||||||||||||||| Sbjct: 136910 cgtgctctgcgccggcggcg 136929
>gb|AY781345.1| Triticum aestivum DREB2 (DREB2) mRNA, complete cds Length = 847 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gtcgcagctccaccacgtgc 375 |||||||||||||||||||| Sbjct: 14 gtcgcagctccaccacgtgc 33
>gb|BC088402.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93598 IMAGE:7128547), complete cds Length = 1361 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 723 tcatcctcttcatcctcctcgtcg 700
>ref|NM_012963.2| Rattus norvegicus high mobility group box 1 (Hmgb1), mRNA Length = 2256 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 647 tcatcctcttcatcctcctcgtcg 624
>gb|M63852.1|SYNHMG1 Rat high mobility group 1 protein synthetic gene, complete cds Length = 924 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 678 tcatcctcttcatcctcctcgtcg 655
>emb|AL671492.12| Mouse DNA sequence from clone RP23-286H11 on chromosome X, complete sequence Length = 202638 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cagagcaagaagatcaggag 84 |||||||||||||||||||| Sbjct: 169217 cagagcaagaagatcaggag 169236
>emb|AL122056.1|HSM801288 Homo sapiens mRNA; cDNA DKFZp434P088 (from clone DKFZp434P088) Length = 4369 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gtctccaacttccccttcca 313 |||||||||||||||||||| Sbjct: 899 gtctccaacttccccttcca 918
>gb|M64986.1|RATAMPHO Rat amphoterin mRNA, complete cds Length = 1225 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcatcctcttcaacctcctcgtcg 189 |||||||||||| ||||||||||| Sbjct: 712 tcatcctcttcatcctcctcgtcg 689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,436,784 Number of Sequences: 3902068 Number of extensions: 3436784 Number of successful extensions: 74256 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73361 Number of HSP's gapped (non-prelim): 895 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
