ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39g07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104260.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G10, full insert sequence Length = 886 Score = 238 bits (120), Expect = 2e-59 Identities = 237/276 (85%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 143 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 202 Query: 247 agcgacaagaagatcaaagtcggcgactccctcgtgttcaactacgccggcggggcgcac 306 ||||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||| Sbjct: 203 agcgacaagaaattcaaaatgggcgataccctcgtgttcaactacgccggtggggcgcac 262 Query: 307 aacgtggcggaggtgagcgcggcggactacgcgtcgtgctccgccgccaacgcgctcagc 366 |||| ||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 263 tcggtggatgaggtgagcgcagcggactacgctgcgtgcaccgctagcaacgcgctccag 322 Query: 367 agcgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatc 426 |||||| |||||||||| ||||||||| | ||||||||||| || ||||||||||||||| Sbjct: 323 agcgacagcagcggcacgaccaccgtcaccctcaagaccgccggcaagcactacttcatc 382 Query: 427 tgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||| || ||||||||||||||| |||||||||| Sbjct: 383 tgcggcatcgccggccactgcagcaacggcatgaag 418
>dbj|AK104000.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E04, full insert sequence Length = 848 Score = 238 bits (120), Expect = 2e-59 Identities = 237/276 (85%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 143 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 202 Query: 247 agcgacaagaagatcaaagtcggcgactccctcgtgttcaactacgccggcggggcgcac 306 ||||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||| Sbjct: 203 agcgacaagaaattcaaaatgggcgataccctcgtgttcaactacgccggtggggcgcac 262 Query: 307 aacgtggcggaggtgagcgcggcggactacgcgtcgtgctccgccgccaacgcgctcagc 366 |||| ||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 263 tcggtggatgaggtgagcgcagcggactacgctgcgtgcaccgctagcaacgcgctccag 322 Query: 367 agcgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatc 426 |||||| |||||||||| ||||||||| | ||||||||||| || ||||||||||||||| Sbjct: 323 agcgacagcagcggcacgaccaccgtcaccctcaagaccgccggcaagcactacttcatc 382 Query: 427 tgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||| || ||||||||||||||| |||||||||| Sbjct: 383 tgcggcatcgccggccactgcagcaacggcatgaag 418
>dbj|AK072802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E05, full insert sequence Length = 889 Score = 238 bits (120), Expect = 2e-59 Identities = 237/276 (85%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 146 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 205 Query: 247 agcgacaagaagatcaaagtcggcgactccctcgtgttcaactacgccggcggggcgcac 306 ||||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||| Sbjct: 206 agcgacaagaaattcaaaatgggcgataccctcgtgttcaactacgccggtggggcgcac 265 Query: 307 aacgtggcggaggtgagcgcggcggactacgcgtcgtgctccgccgccaacgcgctcagc 366 |||| ||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 266 tcggtggatgaggtgagcgcagcggactacgctgcgtgcaccgctagcaacgcgctccag 325 Query: 367 agcgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatc 426 |||||| |||||||||| ||||||||| | ||||||||||| || ||||||||||||||| Sbjct: 326 agcgacagcagcggcacgaccaccgtcaccctcaagaccgccggcaagcactacttcatc 385 Query: 427 tgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||| || ||||||||||||||| |||||||||| Sbjct: 386 tgcggcatcgccggccactgcagcaacggcatgaag 421
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 157 bits (79), Expect = 5e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| Sbjct: 6098297 gtgttcaactacgccggtggggcgcactcggtggatgaggtgagcgcagcggactacgct 6098356 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| |||| |||||||||| |||||| |||||||||| ||||||||| | ||| Sbjct: 6098357 gcgtgcaccgctagcaacgcgctccagagcgacagcagcggcacgaccaccgtcaccctc 6098416 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 |||||||| || |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 6098417 aagaccgccggcaagcactacttcatctgcggcatcgccggccactgcagcaacggcatg 6098476 Query: 460 aag 462 ||| Sbjct: 6098477 aag 6098479 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 6097820 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 6097879 Query: 247 agcgacaagaa 257 ||||||||||| Sbjct: 6097880 agcgacaagaa 6097890
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 157 bits (79), Expect = 5e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| Sbjct: 12116 gtgttcaactacgccggtggggcgcactcggtggatgaggtgagcgcagcggactacgct 12175 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| |||| |||||||||| |||||| |||||||||| ||||||||| | ||| Sbjct: 12176 gcgtgcaccgctagcaacgcgctccagagcgacagcagcggcacgaccaccgtcaccctc 12235 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 |||||||| || |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 12236 aagaccgccggcaagcactacttcatctgcggcatcgccggccactgcagcaacggcatg 12295 Query: 460 aag 462 ||| Sbjct: 12296 aag 12298 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 11639 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 11698 Query: 247 agcgacaagaa 257 ||||||||||| Sbjct: 11699 agcgacaagaa 11709
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 157 bits (79), Expect = 5e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| Sbjct: 102796 gtgttcaactacgccggtggggcgcactcggtggatgaggtgagcgcagcggactacgct 102855 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| |||| |||||||||| |||||| |||||||||| ||||||||| | ||| Sbjct: 102856 gcgtgcaccgctagcaacgcgctccagagcgacagcagcggcacgaccaccgtcaccctc 102915 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 |||||||| || |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 102916 aagaccgccggcaagcactacttcatctgcggcatcgccggccactgcagcaacggcatg 102975 Query: 460 aag 462 ||| Sbjct: 102976 aag 102978 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggcc 246 ||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||| Sbjct: 102319 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgggcc 102378 Query: 247 agcgacaagaa 257 ||||||||||| Sbjct: 102379 agcgacaagaa 102389
>dbj|AK106768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F05, full insert sequence Length = 1448 Score = 157 bits (79), Expect = 5e-35 Identities = 157/183 (85%) Strand = Plus / Minus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| Sbjct: 1225 gtgttcaactacgccggtggggcgcactcggtggatgaggtgagcgcagcggactacgct 1166 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| |||| |||||||||| |||||| |||||||||| ||||||||| | ||| Sbjct: 1165 gcgtgcaccgctagcaacgcgctccagagcgacagcagcggcacgaccaccgtcaccctc 1106 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 |||||||| || |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 1105 aagaccgccggcaagcactacttcatctgcggcatcgccggccactgcagcaacggcatg 1046 Query: 460 aag 462 ||| Sbjct: 1045 aag 1043
>ref|XM_467895.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1055 Score = 113 bits (57), Expect = 6e-22 Identities = 219/273 (80%) Strand = Plus / Plus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccagc 249 ||||||||||||||| ||||| ||||| | ||| | || ||||||| ||||||| || Sbjct: 262 tacaccgtcggcgacgcgtccgggtggacgatcggcgttgattacaccagctgggccggc 321 Query: 250 gacaagaagatcaaagtcggcgactccctcgtgttcaactacgccggcggggcgcacaac 309 |||| | |||||||||| ||| |||||||||||| ||||| |||| ||||||| Sbjct: 322 tccaagtcgttcaaagtcggagacagcctcgtgttcaagtacgcgagcggagcgcacacg 381 Query: 310 gtggcggaggtgagcgcggcggactacgcgtcgtgctccgccgccaacgcgctcagcagc 369 |||| ||||||||||||||||| ||| | ||||| | || |||||||||||| || | Sbjct: 382 gtggtggaggtgagcgcggcggggtacctggcgtgcgcggcggccaacgcgctcggctcc 441 Query: 370 gacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgc 429 ||| |||||||| | ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 442 gacagcagcggctcgaccaccgtcgccctcaagacgcccggcaagcactacttcatctgc 501 Query: 430 ggtgtcaccggccactgcagcagcggcatgaag 462 || ||||||||||| | ||||||||||| Sbjct: 502 accatcgccggccactgcgccggcggcatgaag 534
>dbj|AK071537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100A12, full insert sequence Length = 1055 Score = 113 bits (57), Expect = 6e-22 Identities = 219/273 (80%) Strand = Plus / Plus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccagc 249 ||||||||||||||| ||||| ||||| | ||| | || ||||||| ||||||| || Sbjct: 262 tacaccgtcggcgacgcgtccgggtggacgatcggcgttgattacaccagctgggccggc 321 Query: 250 gacaagaagatcaaagtcggcgactccctcgtgttcaactacgccggcggggcgcacaac 309 |||| | |||||||||| ||| |||||||||||| ||||| |||| ||||||| Sbjct: 322 tccaagtcgttcaaagtcggagacagcctcgtgttcaagtacgcgagcggagcgcacacg 381 Query: 310 gtggcggaggtgagcgcggcggactacgcgtcgtgctccgccgccaacgcgctcagcagc 369 |||| ||||||||||||||||| ||| | ||||| | || |||||||||||| || | Sbjct: 382 gtggtggaggtgagcgcggcggggtacctggcgtgcgcggcggccaacgcgctcggctcc 441 Query: 370 gacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgc 429 ||| |||||||| | ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 442 gacagcagcggctcgaccaccgtcgccctcaagacgcccggcaagcactacttcatctgc 501 Query: 430 ggtgtcaccggccactgcagcagcggcatgaag 462 || ||||||||||| | ||||||||||| Sbjct: 502 accatcgccggccactgcgccggcggcatgaag 534
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 6e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 |||||||| ||||| |||| ||||||| |||| ||||||||||||||||| ||| | Sbjct: 31971127 gtgttcaagtacgcgagcggagcgcacacggtggtggaggtgagcgcggcggggtacctg 31971068 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| | || |||||||||||| || |||| |||||||| | ||||||||||| ||| Sbjct: 31971067 gcgtgcgcggcggccaacgcgctcggctccgacagcagcggctcgaccaccgtcgccctc 31971008 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 ||||| | || |||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 31971007 aagacgcccggcaagcactacttcatctgcaccatcgccggccactgcgccggcggcatg 31970948 Query: 460 aag 462 ||| Sbjct: 31970947 aag 31970945 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 tacaccgtcggcgacagctccggctgga 217 |||||||||||||||| |||||||||| Sbjct: 26363822 tacaccgtcggcgacacatccggctgga 26363795 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccgtcggcgacagctccggc 213 |||||||||||||||||||| Sbjct: 7097248 ccgtcggcgacagctccggc 7097267
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 93.7 bits (47), Expect = 6e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 280 gtgttcaactacgccggcggggcgcacaacgtggcggaggtgagcgcggcggactacgcg 339 |||||||| ||||| |||| ||||||| |||| ||||||||||||||||| ||| | Sbjct: 132128 gtgttcaagtacgcgagcggagcgcacacggtggtggaggtgagcgcggcggggtacctg 132069 Query: 340 tcgtgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctc 399 ||||| | || |||||||||||| || |||| |||||||| | ||||||||||| ||| Sbjct: 132068 gcgtgcgcggcggccaacgcgctcggctccgacagcagcggctcgaccaccgtcgccctc 132009 Query: 400 aagaccgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatg 459 ||||| | || |||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 132008 aagacgcccggcaagcactacttcatctgcaccatcgccggccactgcgccggcggcatg 131949 Query: 460 aag 462 ||| Sbjct: 131948 aag 131946
>gb|AY105433.1| Zea mays PCO099019 mRNA sequence Length = 843 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 343 tgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctcaag 402 ||||||| |||||||||||||||| ||||| || |||| |||||||| || ||||| || Sbjct: 332 tgctccggcgccaacgcgctcagcgacgacgacaccggctccaccaccatcacgctccag 391 Query: 403 accgcggggaagcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||| |||| | |||||| ||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 392 accccgggcacgcactatttcatctgcaacgtccccggccactgcgccagcggcatgaag 451
>gb|AF093537.1|AF093537 Zea mays blue copper protein mRNA, partial cds Length = 325 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 343 tgctccgccgccaacgcgctcagcagcgacggcagcggcaccaccaccgtcgcgctcaag 402 ||||||| |||||||||||||||| ||||| || |||| |||||||| || ||||| || Sbjct: 232 tgctccggcgccaacgcgctcagcgacgacgacaccggctccaccaccatcacgctccag 291 Query: 403 accgcggggaagcactacttcatctgc 429 ||| |||| | |||||||||||||||| Sbjct: 292 accccgggcacgcactacttcatctgc 318
>ref|XM_479991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 715 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 428 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 473
>ref|XM_507126.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1613_G04.25 mRNA Length = 916 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 602 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 647
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 2110377 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 2110422
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 103907 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 103952
>dbj|AK120571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134F16, full insert sequence Length = 715 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 428 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 473
>dbj|AK066535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068C11, full insert sequence Length = 914 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 600 ctacttcctctgcggcctcaccggccactgcggcagcggcatgaag 645
>ref|XM_450958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 966 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 414 gcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 406 gcactacttcatctgcaccatccccggccactgcagcagcggcatgaag 454
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 414 gcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 17789417 gcactacttcatctgcaccatccccggccactgcagcagcggcatgaag 17789465 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 13947713 tcagcagcgacagcagcggcacca 13947690 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 13928832 tcagcagcgacagcagcggcacca 13928855
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 414 gcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 30061 gcactacttcatctgcaccatccccggccactgcagcagcggcatgaag 30109
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 414 gcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 98051 gcactacttcatctgcaccatccccggccactgcagcagcggcatgaag 98099
>dbj|AK065677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035N16, full insert sequence Length = 3828 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 187 aagtacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgg 243 ||||||||||||||||||| ||||||||| | | |||||||| |||||||||||| Sbjct: 2458 aagtacaccgtcggcgacacgtccggctgggcgatgggggcggattacaccacctgg 2402
>dbj|AK059930.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B02, full insert sequence Length = 966 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 414 gcactacttcatctgcggtgtcaccggccactgcagcagcggcatgaag 462 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 406 gcactacttcatctgcaccatccccggccactgcagcagcggcatgaag 454
>ref|NM_191539.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 369 cgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctg 428 |||| ||||||||| ||||||| ||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 246 cgacagcagcggcagcaccaccatcgtgctcacgacgccggggaagcgctatttcatctg 305 Query: 429 cgg 431 ||| Sbjct: 306 cgg 308
>ref|XM_476370.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 377 gcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtca 436 |||||| |||||||||| |||| | || |||| |||||||||||||||||||| || Sbjct: 266 gcggcagcaccaccgtcaagctcgacgccccgggcaagcactacttcatctgcggcgtgc 325 Query: 437 ccggccactgc 447 ||||||||||| Sbjct: 326 ccggccactgc 336
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 377 gcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtca 436 |||||| |||||||||| |||| | || |||| |||||||||||||||||||| || Sbjct: 290471 gcggcagcaccaccgtcaagctcgacgccccgggcaagcactacttcatctgcggcgtgc 290530 Query: 437 ccggccactgc 447 ||||||||||| Sbjct: 290531 ccggccactgc 290541
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctg 428 |||| ||||||||| ||||||| ||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 33344001 cgacagcagcggcagcaccaccatcgtgctcacgacgccggggaagcgctatttcatctg 33343942 Query: 429 cgg 431 ||| Sbjct: 33343941 cgg 33343939
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctg 428 |||| ||||||||| ||||||| ||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 137248 cgacagcagcggcagcaccaccatcgtgctcacgacgccggggaagcgctatttcatctg 137189 Query: 429 cgg 431 ||| Sbjct: 137188 cgg 137186
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctg 428 |||| ||||||||| ||||||| ||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 20167 cgacagcagcggcagcaccaccatcgtgctcacgacgccggggaagcgctatttcatctg 20108 Query: 429 cgg 431 ||| Sbjct: 20107 cgg 20105
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 377 gcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtca 436 |||||| |||||||||| |||| | || |||| |||||||||||||||||||| || Sbjct: 125335 gcggcagcaccaccgtcaagctcgacgccccgggcaagcactacttcatctgcggcgtgc 125394 Query: 437 ccggccactgc 447 ||||||||||| Sbjct: 125395 ccggccactgc 125405
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 377 gcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtca 436 |||||| |||||||||| |||| | || |||| |||||||||||||||||||| || Sbjct: 14709 gcggcagcaccaccgtcaagctcgacgccccgggcaagcactacttcatctgcggcgtgc 14768 Query: 437 ccggccactgc 447 ||||||||||| Sbjct: 14769 ccggccactgc 14779
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 377 gcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtca 436 |||||| |||||||||| |||| | || |||| |||||||||||||||||||| || Sbjct: 42470 gcggcagcaccaccgtcaagctcgacgccccgggcaagcactacttcatctgcggcgtgc 42529 Query: 437 ccggccactgc 447 ||||||||||| Sbjct: 42530 ccggccactgc 42540
>ref|NM_105882.2| Arabidopsis thaliana copper ion binding / electron transporter AT1G72230 mRNA, complete cds Length = 918 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 415 cactacttcatctgcggtgtcaccggccactgca 448 |||||||||||||||||| || |||||||||||| Sbjct: 510 cactacttcatctgcggtatccccggccactgca 543
>gb|AY052214.1| Arabidopsis thaliana At1g72230/T9N14_17 mRNA, complete cds Length = 797 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 415 cactacttcatctgcggtgtcaccggccactgca 448 |||||||||||||||||| || |||||||||||| Sbjct: 333 cactacttcatctgcggtatccccggccactgca 366
>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete sequence Length = 98874 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 415 cactacttcatctgcggtgtcaccggccactgca 448 |||||||||||||||||| || |||||||||||| Sbjct: 52781 cactacttcatctgcggtatccccggccactgca 52814
>gb|AY085679.1| Arabidopsis thaliana clone 16991 mRNA, complete sequence Length = 706 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 415 cactacttcatctgcggtgtcaccggccactgca 448 |||||||||||||||||| || |||||||||||| Sbjct: 342 cactacttcatctgcggtatccccggccactgca 375
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 174 ggcgtccgcggcgaagtacaccgt 197 |||||||||||||||||||||||| Sbjct: 961937 ggcgtccgcggcgaagtacaccgt 961960
>ref|XM_471828.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6462 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| ||||||||||| Sbjct: 6371 actacttcatctgcggcgtccccggccactgc 6402
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| ||||||||||| Sbjct: 14790173 actacttcatctgcggcgtccccggccactgc 14790142 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccag 248 ||||||||||||||| || || ||||| ||||| | |||||||||| |||||||||| Sbjct: 27308471 tacaccgtcggcgactcgtcggggtggactaccggtgtggactacaccgcctgggccag 27308413
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| ||||||||||| Sbjct: 44111 actacttcatctgcggcgtccccggccactgc 44080
>ref|XM_473394.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 546 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccag 248 ||||||||||||||| || || ||||| ||||| | |||||||||| |||||||||| Sbjct: 76 tacaccgtcggcgactcgtcggggtggactaccggtgtggactacaccgcctgggccag 134
>gb|BT013056.1| Lycopersicon esculentum clone 114312R, mRNA sequence Length = 778 Score = 46.1 bits (23), Expect = 0.12 Identities = 71/87 (81%) Strand = Plus / Plus Query: 376 agcggcaccaccaccgtcgcgctcaagaccgcggggaagcactacttcatctgcggtgtc 435 |||||| ||||||| || | ||||||||||| || | || |||||||| ||||| || Sbjct: 288 agcggcgccaccactatccctctcaagaccgccggcactcattacttcatttgcggcgta 347 Query: 436 accggccactgcagcagcggcatgaag 462 | |||||||||||| ||||||||||| Sbjct: 348 atgggccactgcagcggcggcatgaag 374
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccag 248 ||||||||||||||| || || ||||| ||||| | |||||||||| |||||||||| Sbjct: 44399 tacaccgtcggcgactcgtcggggtggactaccggtgtggactacaccgcctgggccag 44341
>dbj|AK119259.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H05, full insert sequence Length = 827 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 190 tacaccgtcggcgacagctccggctggaccaccggggcggactacaccacctgggccag 248 ||||||||||||||| || || ||||| ||||| | |||||||||| |||||||||| Sbjct: 157 tacaccgtcggcgactcgtcggggtggactaccggtgtggactacaccgcctgggccag 215
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 147 cgacggcagtggcaccaccaccgtcg 122
>ref|XM_445966.1| Candida glabrata CBS138, CAGL0E06358g partial mRNA Length = 744 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 agcagcgacggcagcggcacca 385 |||||||||||||||||||||| Sbjct: 729 agcagcgacggcagcggcacca 708
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 agcagcgacggcagcggcacca 385 |||||||||||||||||||||| Sbjct: 638855 agcagcgacggcagcggcacca 638876
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 66239 cgacggcagtggcaccaccaccgtcg 66214
>gb|DQ073390.1| Heliocidaris erythrogramma homeobox protein Hox11/13 (Hox11/13) mRNA, complete cds Length = 3372 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 368 gcgacggcagcggcaccaccac 389 |||||||||||||||||||||| Sbjct: 543 gcgacggcagcggcaccaccac 522
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 21139467 cgacggcagtggcaccaccaccgtcg 21139492
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 gctcagcagcgacggcagcggc 381 |||||||||||||||||||||| Sbjct: 34075 gctcagcagcgacggcagcggc 34054
>gb|AF031195.1|AF031195 Triticum aestivum blue copper-binding protein homolog (S85) mRNA, complete cds Length = 791 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 417 ctacttcatctgcggtgtcaccggccactgcagc 450 ||||||||||||||| |||| |||||||||||| Sbjct: 386 ctacttcatctgcggcatcactggccactgcagc 419
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 21150731 cgacggcagtggcaccaccaccgtcg 21150756
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 1803 cgacggcagtggcaccaccaccgtcg 1778
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 cgacggcagcggcaccaccaccgtcg 394 ||||||||| |||||||||||||||| Sbjct: 191 cgacggcagtggcaccaccaccgtcg 166
>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete sequence Length = 202733 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 actgttttcacagacgctctgctct 58 |||||||||||||| |||||||||| Sbjct: 42504 actgttttcacagaggctctgctct 42480
>ref|XM_470034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 76 gtcggcgacacctccggctggacca 100 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 cttcatctgcggtgtcaccggccactgc 447 |||||||||||| ||| ||||||||||| Sbjct: 273 cttcatctgcggcgtccccggccactgc 300
>ref|XM_364450.1| Magnaporthe grisea 70-15 hypothetical protein (MG09295.4) partial mRNA Length = 1386 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 cagcgacggcagcggcaccaccaccgtcg 394 ||||||||||||||||| || |||||||| Sbjct: 77 cagcgacggcagcggcagcagcaccgtcg 105
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 33449069 gtcggcgacacctccggctggacca 33449093 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 cttcatctgcggtgtcaccggccactgc 447 |||||||||||| ||| ||||||||||| Sbjct: 33451530 cttcatctgcggcgtccccggccactgc 33451557 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ggcgcacaacgtggcggaggtgagcgcggcgg 331 |||||||||||||| || ||||| |||||||| Sbjct: 28309958 ggcgcacaacgtggtggcggtgaacgcggcgg 28309927
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 49042 gtcggcgacacctccggctggacca 49018 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 cttcatctgcggtgtcaccggccactgc 447 |||||||||||| ||| ||||||||||| Sbjct: 46581 cttcatctgcggcgtccccggccactgc 46554
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 33539579 gtcggcgacacctccggctggacca 33539603 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 cttcatctgcggtgtcaccggccactgc 447 |||||||||||| ||| ||||||||||| Sbjct: 33542040 cttcatctgcggcgtccccggccactgc 33542067 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ggcgcacaacgtggcggaggtgagcgcggcgg 331 |||||||||||||| || ||||| |||||||| Sbjct: 28401282 ggcgcacaacgtggtggcggtgaacgcggcgg 28401251
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gtggcggaggtgagcgcggcg 330 ||||||||||||||||||||| Sbjct: 114903 gtggcggaggtgagcgcggcg 114883
>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full insert sequence Length = 1100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 445 gtcggcgacacctccggctggacca 469 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 gtcggcgacagctccggctggacca 220 |||||||||| |||||||||||||| Sbjct: 195 gtcggcgacacctccggctggacca 219
>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II), histone H2B (ch2b-II) and histone H2A (ch2a-II) genes, complete cds Length = 3777 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 389 ccgtcgcgctcaagaccgcggggaa 413 |||||||||||||||| |||||||| Sbjct: 189 ccgtcgcgctcaagacagcggggaa 213
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 cgacggcagcggcaccacca 388 |||||||||||||||||||| Sbjct: 3050544 cgacggcagcggcaccacca 3050563
>ref|XM_475910.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 330 cagcagcgacggcagcggca 311
>ref|XM_467093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tacaccgtcggcgacagctccggctgga 217 |||||||||||||||| |||||||||| Sbjct: 82 tacaccgtcggcgacacatccggctgga 109
>ref|XM_464749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2148 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccgtcggcgacagctccggc 213 |||||||||||||||||||| Sbjct: 686 ccgtcggcgacagctccggc 705
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gccactgcagcagcggcatg 459 |||||||||||||||||||| Sbjct: 2780473 gccactgcagcagcggcatg 2780454
>ref|XM_469495.1| Oryza sativa (japonica cultivar-group), mRNA Length = 662 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 ggcgcacaacgtggcggaggtgagcgcggcgg 331 |||||||||||||| || ||||| |||||||| Sbjct: 210 ggcgcacaacgtggtggcggtgaacgcggcgg 241
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgctcagcagcgacggcagc 378 |||||||||||||||||||| Sbjct: 1372242 cgctcagcagcgacggcagc 1372261
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 ggcgcacaacgtggcggaggtgagcgcggcgg 331 |||||||||||||| || ||||| |||||||| Sbjct: 103084 ggcgcacaacgtggtggcggtgaacgcggcgg 103115
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||| ||||||||| ||| ||||||||||| Sbjct: 38752 actactacatctgcggcgtccccggccactgc 38721
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| | ||||||||| Sbjct: 53569 actacttcatctgcggcgtcccaggccactgc 53600
>gb|AC008146.10| Trypanosoma brucei chromosome 6 clone RPCI93-30P15, complete sequence Length = 127405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cgctcagcagcgacggcagc 378 |||||||||||||||||||| Sbjct: 92874 cgctcagcagcgacggcagc 92855
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 166769 cagcagcgacggcagcggca 166788
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 17451 cagcagcgacggcagcggca 17470
>ref|XM_821130.1| Trypanosoma brucei TREU927 clone RPCI93-30P15 hypothetical protein (Tb927.6.5000) partial mRNA Length = 1185 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgctcagcagcgacggcagc 378 |||||||||||||||||||| Sbjct: 153 cgctcagcagcgacggcagc 172
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gccactgcagcagcggcatg 459 |||||||||||||||||||| Sbjct: 1112422 gccactgcagcagcggcatg 1112441
>emb|Y07662.1|DMGATAFAC D.melanogaster mRNA for GATA transcription factor Length = 4004 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 446 cagcagcgacggcagcggca 465
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 368 gcgacggcagcggcaccaccaccgtcgc 395 ||||||||| ||||||||||||| |||| Sbjct: 225510 gcgacggcatcggcaccaccaccctcgc 225483
>gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Library D) complete sequence Length = 145729 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tgcggtgtcaccggccactg 446 |||||||||||||||||||| Sbjct: 2307 tgcggtgtcaccggccactg 2288
>gb|AC119731.3| Homo sapiens 3 BAC RP11-135O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 44700 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tgcggtgtcaccggccactg 446 |||||||||||||||||||| Sbjct: 23830 tgcggtgtcaccggccactg 23849
>gb|AE012484.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 392 of 460 of the complete genome Length = 13278 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gtggcggaggtgagcgcggc 329 |||||||||||||||||||| Sbjct: 13007 gtggcggaggtgagcgcggc 13026
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gccactgcagcagcggcatg 459 |||||||||||||||||||| Sbjct: 1720286 gccactgcagcagcggcatg 1720267
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 cgacggcagcggcaccacca 388 |||||||||||||||||||| Sbjct: 2418958 cgacggcagcggcaccacca 2418977
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 agcggcaccaccaccgtcgcgctc 399 |||||||||||||||| ||||||| Sbjct: 342912 agcggcaccaccaccgccgcgctc 342935
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gtggcggaggtgagcgcggc 329 |||||||||||||||||||| Sbjct: 4395051 gtggcggaggtgagcgcggc 4395070
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 gcgacggcagcggcaccaccaccg 391 |||||||| ||||||||||||||| Sbjct: 1214264 gcgacggcggcggcaccaccaccg 1214241
>dbj|AK021402.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130202I16 product:SIMILAR TO SOLUTE CARRIER FAMILY 6 (NEUROTRANSMITTER TRANSPORTER, GABA), MEMBER 13 homolog [Homo sapiens], full insert sequence Length = 1020 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ggcggaggtgagcgcggcgg 331 |||||||||||||||||||| Sbjct: 94 ggcggaggtgagcgcggcgg 113
>gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232002 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ggcggaggtgagcgcggcgg 331 |||||||||||||||||||| Sbjct: 127147 ggcggaggtgagcgcggcgg 127166
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||| ||||||||| ||| ||||||||||| Sbjct: 13145328 actactacatctgcggcgtccccggccactgc 13145359 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| | ||||||||| Sbjct: 12981672 actacttcatctgcggcgtcccaggccactgc 12981703
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 28382527 cagcagcgacggcagcggca 28382546
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 accccggacgcctccgacaccccc 543 |||||||||||||| ||||||||| Sbjct: 3383789 accccggacgcctcggacaccccc 3383812
>gb|AE004802.1| Pseudomonas aeruginosa PAO1, section 363 of 529 of the complete genome Length = 10623 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gcagcgacggcagcggcacc 384 |||||||||||||||||||| Sbjct: 2617 gcagcgacggcagcggcacc 2636
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccgtcggcgacagctccggc 213 |||||||||||||||||||| Sbjct: 100667 ccgtcggcgacagctccggc 100686
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 tacaccgtcggcgacagctccggctgga 217 |||||||||||||||| |||||||||| Sbjct: 96174 tacaccgtcggcgacacatccggctgga 96147
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 101390 tcagcagcgacagcagcggcacca 101367 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 82509 tcagcagcgacagcagcggcacca 82532
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 50187 tcagcagcgacagcagcggcacca 50164 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 31306 tcagcagcgacagcagcggcacca 31329
>dbj|AK109849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F06, full insert sequence Length = 2145 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ccgtcggcgacagctccggc 213 |||||||||||||||||||| Sbjct: 686 ccgtcggcgacagctccggc 705
>dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E01, full insert sequence Length = 1526 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cagcagcgacggcagcggca 382 |||||||||||||||||||| Sbjct: 414 cagcagcgacggcagcggca 395
>dbj|AK100153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015O19, full insert sequence Length = 752 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 ggcgcacaacgtggcggaggtgagcgcggcgg 331 |||||||||||||| || ||||| |||||||| Sbjct: 323 ggcgcacaacgtggtggcggtgaacgcggcgg 354
>ref|NM_209244.1| Eremothecium gossypii ADL205Cp (ADL205C), mRNA Length = 1407 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 agcggcaccaccaccgtcgcgctc 399 |||||||||||||||| ||||||| Sbjct: 392 agcggcaccaccaccgccgcgctc 369
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 acaccacctgggccagcgac 252 |||||||||||||||||||| Sbjct: 1017119 acaccacctgggccagcgac 1017138
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full insert sequence Length = 1407 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 tcagcagcgacggcagcggcacca 385 ||||||||||| |||||||||||| Sbjct: 905 tcagcagcgacagcagcggcacca 882
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 cgctcagcagcgacggcagcggca 382 |||||| ||||||||||||||||| Sbjct: 1539428 cgctcaacagcgacggcagcggca 1539405
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||| ||||||||| ||| ||||||||||| Sbjct: 13225507 actactacatctgcggcgtccccggccactgc 13225538 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 actacttcatctgcggtgtcaccggccactgc 447 |||||||||||||||| ||| | ||||||||| Sbjct: 13061851 actacttcatctgcggcgtcccaggccactgc 13061882
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 tacaccgtcggcgacagctccggctgga 217 |||||||||||||||| |||||||||| Sbjct: 87035 tacaccgtcggcgacacatccggctgga 87008
>emb|CR956367.12| Pig DNA sequence from clone PigE-122C21 on chromosome 17, complete sequence Length = 124577 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gcggtgtcaccggccactgc 447 |||||||||||||||||||| Sbjct: 80662 gcggtgtcaccggccactgc 80681 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,097,999 Number of Sequences: 3902068 Number of extensions: 3097999 Number of successful extensions: 63132 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 60896 Number of HSP's gapped (non-prelim): 2235 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
