ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39g03 |
|---|---|
| Clone Library Name | barley_pub |
>HAL3A_ARATH (Q9SWE5) Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)| (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (AtCoaC) Length = 209 Score = 184 bits (466), Expect = 2e-46 Identities = 86/108 (79%), Positives = 98/108 (90%) Frame = +3 Query: 246 RPRVLLAASGSVAAIKFESLCRIFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEW 425 +PRVLLAASGSVAAIKF +LC F+EWAEVRAV TKS+LHF+D+ SLP +V LYTD+DEW Sbjct: 19 KPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEW 78 Query: 426 STWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 S+W KIGD VLHIELR+WAD++VIAPLSANTL KIAGGLCDNLLTCII Sbjct: 79 SSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCII 126
>HAL3B_ARATH (P94063) Probable phosphopantothenoylcysteine decarboxylase (EC| 4.1.1.36) (Halotolerance protein Hal3b) (AtHal3b) Length = 201 Score = 183 bits (465), Expect = 3e-46 Identities = 84/108 (77%), Positives = 100/108 (92%) Frame = +3 Query: 246 RPRVLLAASGSVAAIKFESLCRIFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEW 425 +PR+LLAASGSVA+IKF +LC FSEWAEV+AVA+KS+L+FVD+ SLP +V LYTD+DEW Sbjct: 11 KPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVTLYTDEDEW 70 Query: 426 STWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 S+W KIGD VLHIELR+WAD+M+IAPLSANTLAKIAGGLCDNLLTCI+ Sbjct: 71 SSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIV 118
>COAC_MOUSE (Q8BZB2) Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)| (PPC-DC) (CoaC) Length = 204 Score = 110 bits (276), Expect = 2e-24 Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 2/126 (1%) Frame = +3 Query: 198 MATSEPVQQSWELESSRPRVLLAASGSVAAIKFESLCRIFSE--WAEVRAVATKSALHFV 371 M P + E + RVL+ +GSVAA+K L + EV V T+ A HF Sbjct: 1 MEPKAPCPAAVPSEERKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFY 60 Query: 372 DRSSLPSDVVLYTDDDEWSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDN 551 +P V LY+D DEW W + D VLHI+LR+WAD+M++APL ANTL K+A G+CDN Sbjct: 61 SPQDVP--VTLYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDN 118 Query: 552 LLTCII 569 LLTC+I Sbjct: 119 LLTCVI 124
>COAC_HUMAN (Q96CD2) Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)| (PPC-DC) (CoaC) Length = 204 Score = 105 bits (261), Expect = 1e-22 Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 2/107 (1%) Frame = +3 Query: 255 VLLAASGSVAAIKFESLCRIFSE--WAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 VL+ +GSVAA+K L + EV V T+ A HF +P V LY+D DEW Sbjct: 20 VLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSDADEWE 77 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 W D VLHI+LR+WAD++++APL ANTL K+A G+CDNLLTC++ Sbjct: 78 MWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVM 124
>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background protein 3)| Length = 674 Score = 91.7 bits (226), Expect = 1e-18 Identities = 41/62 (66%), Positives = 50/62 (80%) Frame = +3 Query: 384 LPSDVVLYTDDDEWSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTC 563 LP+ + +TD DEW W + D VLHIELR+WADI+V+APL+ANTLAKIA GLCDNLLT Sbjct: 434 LPAHIQFWTDQDEWDVWRQRTDPVLHIELRRWADILVVAPLTANTLAKIALGLCDNLLTS 493 Query: 564 II 569 +I Sbjct: 494 VI 495
>SIS2_YEAST (P36024) Protein SIS2 (Halotolerance protein HAL3)| Length = 562 Score = 91.3 bits (225), Expect = 2e-18 Identities = 41/62 (66%), Positives = 50/62 (80%) Frame = +3 Query: 384 LPSDVVLYTDDDEWSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTC 563 LP + L+TD DEW W + D VLHIELR+WADI+V+APL+ANTL+KIA GLCDNLLT Sbjct: 353 LPPHIQLWTDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTS 412 Query: 564 II 569 +I Sbjct: 413 VI 414
>SIS2_CANTR (Q12600) Protein SIS2 (Halotolerance protein HAL3)| Length = 531 Score = 85.9 bits (211), Expect = 7e-17 Identities = 49/115 (42%), Positives = 74/115 (64%), Gaps = 10/115 (8%) Frame = +3 Query: 255 VLLAASGSVAAIKFE----SLCRIF-SEWAEVRAVATKSALHFVDRSSLP-----SDVVL 404 VL+ G+++ K + L I+ S+ ++ + TKS+ +F+ +L V + Sbjct: 270 VLIGVCGALSVGKVKLIVNKLLEIYTSDKISIQVILTKSSENFLLPETLNVLENVKKVRV 329 Query: 405 YTDDDEWSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 +TD DEW+TW D VLHIELR+WADI+++ PL+ANTLAKI+ G+CDNLLT +I Sbjct: 330 WTDIDEWTTWKTRLDPVLHIELRRWADILLVCPLTANTLAKISLGICDNLLTNVI 384
>YKI8_YEAST (P36076) Hypothetical protein YKL088w| Length = 571 Score = 84.0 bits (206), Expect = 3e-16 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 12/117 (10%) Frame = +3 Query: 255 VLLAASGSVAAIK----FESLCRIFS-EWAEVRAVATKSALHFVDRSSLPSDVVLYTDDD 419 +L+ A+GSVA IK + L +I+ E ++ + TK A HF+ + + V ++ ++D Sbjct: 311 ILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEHFLKGLKMSTHVKIWREED 370 Query: 420 EW------STWTKIG-DEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 W T + + +LH ELRKWADI +IAPLSANTLAK+A G+C+NLLT ++ Sbjct: 371 AWVFDAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLANGICNNLLTSVM 427
>COABC_SYNY3 (P73881) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 402 Score = 67.8 bits (164), Expect = 2e-11 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = +3 Query: 252 RVLLAASGSVAAIKF-ESLCRIFSEWAEVRAVATKSALHFVDRSSLPSDV--VLYTDDDE 422 R+L+ G +AA K E + ++F + AEVR + T A FV + + Y D D Sbjct: 6 RILIGVGGGIAAYKICEVVSQLFQQGAEVRVILTAEAEKFVTPLTFTTLARHPAYGDADF 65 Query: 423 WSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLT 560 W I LHI+L +WADI +IAPL+A+TLAK+ G D+LL+ Sbjct: 66 WQP---IHHRPLHIDLGEWADIFLIAPLTAHTLAKLGHGFADDLLS 108
>COABC_VIBF1 (Q5E8M6) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 409 Score = 59.3 bits (142), Expect = 7e-09 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCR-IFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 R+LL SG +AA K L R + AEVR V TK+A F+ ++ + Sbjct: 8 RILLGISGGIAAYKCAELTRRLIERGAEVRVVMTKAAKEFITPLTMQA-----------V 56 Query: 429 TWTKIGDEVL---------HIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + D +L HIEL KWADI+++AP +A+ +A++A G+ ++LL+ ++ Sbjct: 57 SGHPVADSLLDPAAEASMGHIELAKWADIVLLAPATADLIARMAAGMGNDLLSTLV 112
>COABC_VIBVY (Q7MPS9) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 401 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIFSE-WAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++LL SG +AA K L R E AEV+ V TK+A F+ ++ + D Sbjct: 8 KILLGISGGIAAYKCADLTRRLKERGAEVQVVMTKAAKEFITPLTMQAVSGRPVSDSLLD 67 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + HIEL KWAD++++AP +A+ +A++A G+ ++LLT ++ Sbjct: 68 PAAEAS--MGHIELAKWADLILLAPATADLIARMAAGMGNDLLTTLV 112
>COABC_VIBVU (Q8DDX8) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 401 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIFSE-WAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++LL SG +AA K L R E AEV+ V TK+A F+ ++ + D Sbjct: 8 KILLGISGGIAAYKCADLTRRLKERGAEVQVVMTKAAKEFITPLTMQAVSGRPVSDSLLD 67 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + HIEL KWAD++++AP +A+ +A++A G+ ++LLT ++ Sbjct: 68 PAAEAS--MGHIELAKWADLILLAPATADLIARMAAGMGNDLLTTLV 112
>COABC_VIBPA (Q87T89) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 399 Score = 55.8 bits (133), Expect = 8e-08 Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCR-IFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++LL SG +AA K L R + A+V+ V TK+A F+ ++ + D Sbjct: 8 KILLGISGGIAAYKCAELTRRLIERGAQVQVVMTKAAKEFITPLTMQAVSGRPVSDSLLD 67 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + HIEL KWAD++++AP +A+ +A+++ G+ ++LLT ++ Sbjct: 68 PAAEAS--MGHIELAKWADLVLLAPATADLIARMSAGMGNDLLTTLV 112
>COAC_STRMU (Q54433) Probable phosphopantothenoylcysteine decarboxylase (EC| 4.1.1.36) (PPCDC) Length = 179 Score = 55.5 bits (132), Expect = 1e-07 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIFSEWA-EVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++LLA SGS+AA K L ++ V + T +A F+ P + + + + +S Sbjct: 4 KILLAVSGSIAAYKAADLSHQLTKLGYHVNVLMTNAAKQFIP----PLTLQVLSKNPVYS 59 Query: 429 TWTKIGDE--VLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCI 566 K D + HI L K AD+ ++AP SANTLA +A G DN++T + Sbjct: 60 NVMKEDDPQVINHIALAKQADLFLLAPASANTLAHLAHGFADNIVTSV 107
>COABC_ECOLI (P0ABQ0) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 405 Score = 55.1 bits (131), Expect = 1e-07 Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 2/107 (1%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCR-IFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 +++L SG +AA K L R + A+VR T++A F+ SL + V Y D S Sbjct: 6 KIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQA-VSGYPVSD--S 62 Query: 429 TWTKIGDEVL-HIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCI 566 + + HIEL KWAD++++AP +A+ +A++A G+ ++L++ I Sbjct: 63 LLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTI 109
>COABC_ECOL6 (P0ABQ1) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 405 Score = 55.1 bits (131), Expect = 1e-07 Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 2/107 (1%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCR-IFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 +++L SG +AA K L R + A+VR T++A F+ SL + V Y D S Sbjct: 6 KIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQA-VSGYPVSD--S 62 Query: 429 TWTKIGDEVL-HIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCI 566 + + HIEL KWAD++++AP +A+ +A++A G+ ++L++ I Sbjct: 63 LLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTI 109
>MRSD_BACSY (Q9RC23) Mersacidin decarboxylase (EC 4.1.1.-)| (Mersacidin-modifying enzyme mrsD) Length = 194 Score = 54.3 bits (129), Expect = 2e-07 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIF-SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++L+ GS++++ S F S + E+R V TK+A +P+ V Y D +S Sbjct: 10 KLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTA-----EDLIPAHTVSYFCDHVYS 64 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + G H+E+ +WADI I P +AN L + A G+ NL+ + Sbjct: 65 EHGENGKRHSHVEIGRWADIYCIIPATANILGQTANGVAMNLVATTV 111
>COABC_VIBCH (Q9KVD1) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 399 Score = 53.5 bits (127), Expect = 4e-07 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCR-IFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++LL SG +AA K L R + A V+ V T +A F+ ++ + D Sbjct: 8 KILLGISGGIAAYKCAELTRRLVERGATVQVVMTHAAKEFITPLTMQAVSGRPVSDSLLD 67 Query: 429 TWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + HIEL KWAD++++AP +A+ +A++A G+ ++LLT +I Sbjct: 68 PAAEAS--MGHIELAKWADLVLLAPATADLIARMAAGMGNDLLTTLI 112
>COABC_HAEIN (P44953) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 400 Score = 50.4 bits (119), Expect = 3e-06 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +3 Query: 255 VLLAASGSVAAIKFESLCRIFSEW-AEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWST 431 +++ +G +AA K L R+ + AEVR V T +A FV +L + Sbjct: 8 IVVGITGGIAAYKTIELIRLLRKAEAEVRVVLTPAAAEFVTPLTLQAISGNAVSQSLLDP 67 Query: 432 WTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCI 566 ++ + HIEL KWAD ++IAP SA+ +A++ G+ ++LL+ I Sbjct: 68 QAELA--MGHIELAKWADAIIIAPASADFIARLTIGMANDLLSTI 110
>COABC_BORBU (O51752) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 390 Score = 49.7 bits (117), Expect = 6e-06 Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Frame = +3 Query: 255 VLLAASGSVAAIKFESLCRIFSEWA-EVRAVATKSALHFVDRSSLPSDVVLYTDDDEWST 431 +L+ G +A+ K + + +V+ + T++A F+ +L + + + + Sbjct: 7 ILIGICGGIASYKSVYIVSSLVKLGYKVKVIMTQNATKFITPLTLET---ISKNKIITNL 63 Query: 432 WTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 W +EV HI++ KWA ++++ P + NT++KIA G+ D+ LT II Sbjct: 64 WDLDHNEVEHIKIAKWAHLILVIPATYNTISKIASGIADDALTTII 109
>COABC_MYCTU (P67733) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 418 Score = 48.9 bits (115), Expect = 1e-05 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIFSEWAE-VRAVATKSALHFVDRSSLP--SDVVLYTDDDE 422 +V++ SG +AA K ++ R +E + VR + T+SAL FV ++ S + TD Sbjct: 10 QVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTD--- 66 Query: 423 WSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + V H+ L + AD++V+AP +A+ LA+ A G D+LLT + Sbjct: 67 --VFADV-PAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATL 112
>COABC_MYCBO (P67734) Coenzyme A biosynthesis bifunctional protein coaBC| (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phosp Length = 418 Score = 48.9 bits (115), Expect = 1e-05 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%) Frame = +3 Query: 252 RVLLAASGSVAAIKFESLCRIFSEWAE-VRAVATKSALHFVDRSSLP--SDVVLYTDDDE 422 +V++ SG +AA K ++ R +E + VR + T+SAL FV ++ S + TD Sbjct: 10 QVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTD--- 66 Query: 423 WSTWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCII 569 + + V H+ L + AD++V+AP +A+ LA+ A G D+LLT + Sbjct: 67 --VFADV-PAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATL 112
>EPID_STAEP (P30197) Epidermin decarboxylase (EC 4.1.1.-) (Epidermin-modifying| enzyme epiD) Length = 181 Score = 45.8 bits (107), Expect = 8e-05 Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 2/107 (1%) Frame = +3 Query: 252 RVLLAASGSVAAIKFES-LCRIFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWS 428 ++L+ A+ S+ I + + + EV + + S+ +F++ L L+ D+ Sbjct: 4 KLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTDVLK----LFCDN---- 55 Query: 429 TWTKIGDEVL-HIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCI 566 + +I D +L HI + + + +++ P SANT+ KIA G+CDNLLT + Sbjct: 56 LYDEIKDPLLNHINIVENHEYILVLPASANTINKIANGICDNLLTTV 102
>Y730_METJA (Q58140) Hypothetical protein MJ0730| Length = 186 Score = 33.9 bits (76), Expect = 0.33 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D+ ++AP +ANT AKIA G+ D L+T Sbjct: 82 DLFLVAPATANTTAKIAYGIADTLIT 107
>SYI_FRATT (Q5NGD0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 935 Score = 32.3 bits (72), Expect = 0.97 Identities = 21/87 (24%), Positives = 43/87 (49%) Frame = +3 Query: 282 AAIKFESLCRIFSEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEVLH 461 A + E +I +EV V V ++SL +++ +Y D ++ K+G+E+ Sbjct: 799 AELDLEYWAKIQEIRSEVNRVLEIKRNEDVIKASLEAEITIYADKYNYNLLEKLGNELRF 858 Query: 462 IELRKWADIMVIAPLSANTLAKIAGGL 542 + + AD+ VI +++++A GL Sbjct: 859 LLISSKADLKVIEESTSSSIAANIPGL 885
>PAAD_DEIRA (Q9RR91) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 195 Score = 32.3 bits (72), Expect = 0.97 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +3 Query: 489 MVIAPLSANTLAKIAGGLCDNLLT 560 M+I P SA TLAK+A G DNL++ Sbjct: 88 MLIVPCSAGTLAKVAHGFADNLIS 111
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 32.3 bits (72), Expect = 0.97 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 9/66 (13%) Frame = -2 Query: 400 TTSLGRDDLSTKC---------NADLVATARTSAHSEKIRQRLSNFIAATLPEAARRTRG 248 T SL RD LS C NADL A +A EK+ R N AA+L E+A+R++ Sbjct: 495 TGSLPRDGLSQSCEWVTKVLDDNADLAAQRTVAAKGEKLYMRTRN--AASL-ESAKRSKQ 551 Query: 247 LLDSSS 230 ++ S + Sbjct: 552 VVSSDN 557
>PAAD_THEAC (Q9HJ72) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 180 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D MVI P S T++KIA G+ D L+T Sbjct: 76 DSMVIVPCSITTISKIAAGISDTLIT 101
>PAAD_PYRAB (Q9V030) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 181 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D MVIAP S TL+ IA G +NL+T Sbjct: 71 DAMVIAPCSMKTLSAIANGFSNNLIT 96
>PAAD_NEIMB (Q9JXP4) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 189 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D M++AP S TLA +A G DNLLT Sbjct: 80 DGMLVAPCSMRTLASVAHGFGDNLLT 105
>PAAD_BACSU (P94404) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 204 Score = 31.2 bits (69), Expect = 2.2 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D M++AP S +LA I G+ DNLLT Sbjct: 90 DGMIVAPCSMKSLASIRTGMADNLLT 115
>LHR_ECOLI (P30015) Probable ATP-dependent helicase lhr (EC 3.6.1.-) (Large| helicase-related protein) Length = 1538 Score = 31.2 bits (69), Expect = 2.2 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2 Query: 434 DKDRRRGSAHRAAKVGRHHGDRPLISKHSGQDRRRVMRQPPDV 562 D+ RRRG +VG GD P Q+R ++ R PPD+ Sbjct: 114 DERRRRGETEVNLRVGIRTGDTP------AQERSKLTRNPPDI 150
>DDL_STAAR (Q6GEZ1) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITTEIKSTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>SURE_DEIRA (Q9RRT8) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 268 Score = 30.4 bits (67), Expect = 3.7 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +3 Query: 240 SSRPRVLLAASGSVAAIKFESLCRIFSEWAEVRAVA 347 S+RPRVL+A + A ++L SEWA+V VA Sbjct: 14 SARPRVLVANDDGIFAPGIKALGLALSEWADVVVVA 49
>DDL_STAAW (Q8NVH8) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIISTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>DDL_STAAS (Q6G7M7) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIISTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>DDL_STAAN (P63892) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>DDL_STAAM (P63891) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>DDL_STAAC (Q5HEB7) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV---- 455 E++C +F S EV + ++ L+ +D+ D++ T+D +W I E+ Sbjct: 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTD 63 Query: 456 -LHIE 467 LH+E Sbjct: 64 ELHLE 68
>PYRB_CLOPE (Q8XL59) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 307 Score = 30.4 bits (67), Expect = 3.7 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = -2 Query: 529 ILARVFADKGAITMMSAHFRSSMCRTSSPIFVQVDHSSSSV*RTTSLGRDDLST-KCNAD 353 ILA +F + T +S F S+M R + + +SSSV + SL RD + T C AD Sbjct: 43 ILATLFYEPSTRTRLS--FESAMLRLGGQVIGFSEPNSSSVSKGESL-RDTIKTVNCYAD 99 Query: 352 LVATARTSAHSEKIRQRLSN 293 L+A + K+ S+ Sbjct: 100 LIAMRHPLEGAAKVASMYSD 119
>SECB_PSEPK (Q88CX7) Protein-export protein secB| Length = 161 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 426 STWTKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLL 557 S K GDEV I + A I +IA L A +++ G C N+L Sbjct: 70 SVTVKNGDEVAFIAEVQQAGIFLIANLDAPSMSHTLGAFCPNIL 113
>Y208_METJA (Q57661) Hypothetical protein MJ0208| Length = 246 Score = 30.0 bits (66), Expect = 4.8 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D ++ +P + NT+AK+ G+ D+L+T Sbjct: 96 DYLICSPATGNTVAKVVNGIADSLVT 121
>PAAD_PYRHO (O58742) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 181 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D MVIAP S TL IA G NL+T Sbjct: 71 DAMVIAPCSMKTLGAIANGFSYNLIT 96
>PAAD_NEIMA (Q9JW78) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 189 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 Query: 483 DIMVIAPLSANTLAKIAGGLCDNLLT 560 D M++AP S TLA + G DNLLT Sbjct: 80 DGMLVAPCSMRTLASVVHGFGDNLLT 105
>IF2_LACJO (Q74IS8) Translation initiation factor IF-2| Length = 880 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = -2 Query: 343 TARTSAHSEKIRQRLSNFIAATLPEAARRTRGLLDSSSQLCCTGSDVAICFTWSPQLRGD 164 TA++ A SE + RL N I + + +G+L+ + + TG ++ + TW G Sbjct: 745 TAKSQADSEGVDIRLYNIIYKVMDDVEAAMKGMLEPTYEEKVTG-NLTVRETWKVSKIGT 803 Query: 163 LVGA 152 + GA Sbjct: 804 IAGA 807
>DDL_STAES (Q8CRP5) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 357 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV 455 E++C +F S +V + ++ L+ +D+ D++ T+D EW I E+ Sbjct: 4 ENICIVFGGKSAEHDVSILTAQNVLNAIDKERYQVDIIYITNDGEWKKKDNITQEI 59
>DDL_STAEQ (Q5HMD8) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 357 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 297 ESLCRIF---SEWAEVRAVATKSALHFVDRSSLPSDVVLYTDDDEWSTWTKIGDEV 455 E++C +F S +V + ++ L+ +D+ D++ T+D EW I E+ Sbjct: 4 ENICIVFGGKSAEHDVSILTAQNVLNAIDKERYQVDIIYITNDGEWKKKDNITQEI 59
>PAAD_PSEAE (Q9HX08) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 209 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 489 MVIAPLSANTLAKIAGGLCDNLL 557 MVI P S TL+ +A G C+NL+ Sbjct: 98 MVICPCSTGTLSAVATGACNNLI 120
>RUVX_AZOSE (Q5P6I6) Putative Holliday junction resolvase (EC 3.1.-.-)| Length = 156 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +3 Query: 231 ELESSRPRVLLAASGSVAAIKFESLCRIFSEWAEVRAV 344 ELE+ R LL G +A +F ++ ++ EW V V Sbjct: 34 ELETRRASALLTLHGEASAPRFAAIAKLLDEWRPVGLV 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,160,564 Number of Sequences: 219361 Number of extensions: 1556261 Number of successful extensions: 4594 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4479 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4589 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
