ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart39g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CJ022_MOUSE (Q6PDY2) Protein C10orf22 homolog 67 3e-11
2CJ022_HUMAN (Q96SZ5) Protein C10orf22 65 1e-10
3CCDC7_MACFA (Q95J40) Coiled-coil domain-containing protein 7 29 8.1
4BCL9_DROME (Q961D9) Bcl-9 homolog (Protein legless) 29 8.1

>CJ022_MOUSE (Q6PDY2) Protein C10orf22 homolog|
          Length = 256

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 34/91 (37%), Positives = 55/91 (60%)
 Frame = +3

Query: 288 APGFVPPPDAVARLAAILNDLKSQDVGIDASMTCFKRSDSRASPAVTYLHFYDCSKFSFG 467
           APGF   P+ ++ L ++L  ++++D+ I A      +   R  P VTY+H Y+   FS G
Sbjct: 32  APGF---PENLSLLKSLLTQVRAEDLNI-APRKALPQPLPRNLPPVTYMHIYETEGFSLG 87

Query: 468 IFCLPKSSVIPLHNHPGMTVFSKMLFGSMRL 560
           +F L   + IPLH+HPGM    K+L+G++R+
Sbjct: 88  VFLLKSGTCIPLHDHPGMHGMLKVLYGTVRI 118



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>CJ022_HUMAN (Q96SZ5) Protein C10orf22|
          Length = 270

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 32/90 (35%), Positives = 53/90 (58%)
 Frame = +3

Query: 291 PGFVPPPDAVARLAAILNDLKSQDVGIDASMTCFKRSDSRASPAVTYLHFYDCSKFSFGI 470
           PGF   P+ +++L ++L  L+++D+ I       +       P VTY+H Y+   FS G+
Sbjct: 45  PGF---PENLSKLKSLLTQLRAEDLNIAPRKATLQPLPPNLPP-VTYMHIYETDGFSLGV 100

Query: 471 FCLPKSSVIPLHNHPGMTVFSKMLFGSMRL 560
           F L   + IPLH+HPGM    K+L+G++R+
Sbjct: 101 FLLKSGTSIPLHDHPGMHGMLKVLYGTVRI 130



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>CCDC7_MACFA (Q95J40) Coiled-coil domain-containing protein 7|
          Length = 477

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/42 (35%), Positives = 28/42 (66%)
 Frame = -3

Query: 506 VQRNDRRLGQAEDAERKLGAVVEMQIGDSRRRPRVAALEAGH 381
           V++ D+  G++ED+E+K+ +  E +I D  +  +VA LE G+
Sbjct: 338 VKKKDK--GKSEDSEKKMSSEKEFKIKDLDQVQKVARLEIGN 377



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>BCL9_DROME (Q961D9) Bcl-9 homolog (Protein legless)|
          Length = 1469

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 237  SPMQRLFDTSREV-FSASAPGFVPPPDAVARLAAILNDLKSQDVGI 371
            SP+  L + +++V F+AS+PGF P P   +   + LN  K     I
Sbjct: 911  SPVNSLIEANKDVRFAASSPGFNPHPHMQSNSNSALNAYKMGSTNI 956


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,783,002
Number of Sequences: 219361
Number of extensions: 761900
Number of successful extensions: 3090
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3090
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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