ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39f08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 595 bits (300), Expect = e-167 Identities = 441/488 (90%) Strand = Plus / Plus Query: 99 gccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgcc 158 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6676293 gccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctgatctgcgcc 6676352 Query: 159 gtccccgtcatcgcctcgggcgtctggttcgcgtcggctcagggggaggagtgcgcgcgg 218 ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| || Sbjct: 6676353 gtcccggtgatcgcctcgggcgtgtggttcgcgtcggcgcagggggaggagtgcgcccgc 6676412 Query: 219 ctggcgcgctggccagtggccatcctgggcgggctcatcctgctggcggcgctggcgggt 278 |||||||| ||||| |||||||||||||| || |||||||| || || || || || || Sbjct: 6676413 ctggcgcggtggccggtggccatcctggggggcctcatcctccttgccgccctcgccggc 6676472 Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | Sbjct: 6676473 ttcgtcggcgcctactggaaccgccgccgcctcctcgcgttctacctcttcgccatggcg 6676532 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6676533 tcgctcatcgcgctgctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 6676592 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| Sbjct: 6676593 ggcgcctacccggtgctcggccgcgcctacgacgagtaccacctcgatggcttctccatg 6676652 Query: 459 tggctgcgcgggtacgtctccgacgaccccgccaggtgggaggggatcaggtcctgcatc 518 ||||| || || ||||||||||||||||| || |||||||| |||||| | | ||| || Sbjct: 6676653 tggctccggggctacgtctccgacgacccggcgcggtgggagcggatcaaggcgtgcctc 6676712 Query: 519 gccgtctctgacacctgcaagaagctcgcccgacaggccagcttcgtcaccgccgaccag 578 | |||||| ||||||||||||||||| || || |||||| | ||| |||||||||||||| Sbjct: 6676713 gtcgtctccgacacctgcaagaagctggcgcgccaggccgggttcctcaccgccgaccag 6676772 Query: 579 ttctacca 586 |||||||| Sbjct: 6676773 ttctacca 6676780
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 595 bits (300), Expect = e-167 Identities = 441/488 (90%) Strand = Plus / Plus Query: 99 gccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgcc 158 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110668 gccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctgatctgcgcc 110727 Query: 159 gtccccgtcatcgcctcgggcgtctggttcgcgtcggctcagggggaggagtgcgcgcgg 218 ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| || Sbjct: 110728 gtcccggtgatcgcctcgggcgtgtggttcgcgtcggcgcagggggaggagtgcgcccgc 110787 Query: 219 ctggcgcgctggccagtggccatcctgggcgggctcatcctgctggcggcgctggcgggt 278 |||||||| ||||| |||||||||||||| || |||||||| || || || || || || Sbjct: 110788 ctggcgcggtggccggtggccatcctggggggcctcatcctccttgccgccctcgccggc 110847 Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | Sbjct: 110848 ttcgtcggcgcctactggaaccgccgccgcctcctcgcgttctacctcttcgccatggcg 110907 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110908 tcgctcatcgcgctgctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 110967 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| Sbjct: 110968 ggcgcctacccggtgctcggccgcgcctacgacgagtaccacctcgatggcttctccatg 111027 Query: 459 tggctgcgcgggtacgtctccgacgaccccgccaggtgggaggggatcaggtcctgcatc 518 ||||| || || ||||||||||||||||| || |||||||| |||||| | | ||| || Sbjct: 111028 tggctccggggctacgtctccgacgacccggcgcggtgggagcggatcaaggcgtgcctc 111087 Query: 519 gccgtctctgacacctgcaagaagctcgcccgacaggccagcttcgtcaccgccgaccag 578 | |||||| ||||||||||||||||| || || |||||| | ||| |||||||||||||| Sbjct: 111088 gtcgtctccgacacctgcaagaagctggcgcgccaggccgggttcctcaccgccgaccag 111147 Query: 579 ttctacca 586 |||||||| Sbjct: 111148 ttctacca 111155
>ref|XM_464681.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 589 bits (297), Expect = e-165 Identities = 438/485 (90%) Strand = Plus / Plus Query: 102 atggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgccgtc 161 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1 atggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctgatctgcgccgtc 60 Query: 162 cccgtcatcgcctcgggcgtctggttcgcgtcggctcagggggaggagtgcgcgcggctg 221 || || |||||||||||||| |||||||||||||| ||||||||||||||||| || ||| Sbjct: 61 ccggtgatcgcctcgggcgtgtggttcgcgtcggcgcagggggaggagtgcgcccgcctg 120 Query: 222 gcgcgctggccagtggccatcctgggcgggctcatcctgctggcggcgctggcgggtttc 281 ||||| ||||| |||||||||||||| || |||||||| || || || || || || ||| Sbjct: 121 gcgcggtggccggtggccatcctggggggcctcatcctccttgccgccctcgccggcttc 180 Query: 282 gtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggggcg 341 |||||||||||||||||||||||||||||||| || ||||||||||||||||||| | || Sbjct: 181 gtcggcgcctactggaaccgccgccgcctcctcgcgttctacctcttcgccatggcgtcg 240 Query: 342 ctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctccggc 401 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcatcgcgctgctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctccggc 300 Query: 402 gcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatgtgg 461 |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| Sbjct: 301 gcctacccggtgctcggccgcgcctacgacgagtaccacctcgatggcttctccatgtgg 360 Query: 462 ctgcgcgggtacgtctccgacgaccccgccaggtgggaggggatcaggtcctgcatcgcc 521 || || || ||||||||||||||||| || |||||||| |||||| | | ||| ||| | Sbjct: 361 ctccggggctacgtctccgacgacccggcgcggtgggagcggatcaaggcgtgcctcgtc 420 Query: 522 gtctctgacacctgcaagaagctcgcccgacaggccagcttcgtcaccgccgaccagttc 581 ||||| ||||||||||||||||| || || |||||| | ||| ||||||||||||||||| Sbjct: 421 gtctccgacacctgcaagaagctggcgcgccaggccgggttcctcaccgccgaccagttc 480 Query: 582 tacca 586 ||||| Sbjct: 481 tacca 485
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 204 bits (103), Expect = 2e-49 Identities = 228/267 (85%), Gaps = 2/267 (0%) Strand = Plus / Minus Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 21851944 ttcgccggcgcctactggaaccgccggggcctcctcgccgcctacctcttcgccatggcc 21851885 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 ||||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| Sbjct: 21851884 gcgctcatcaccctcctcctcgccctcctcgtcttcgccttcgccgtcacccgcccctcc 21851825 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||| | ||| ||||| |||||||| |||||||||||||||| ||||| Sbjct: 21851824 ggcgcctaccccgccttcgcccgcgcctacgacgactaccgcctcgacggctactccacc 21851765 Query: 459 tggctgcgcgggtacgtctccgacgaccc-cgccaggtgggaggggatcaggtcctgcat 517 |||||||| | |||| ||| |||||| |||| ||||||||||||||||| | ||| | Sbjct: 21851764 tggctgcgggaccgcgtcgccggcgaccctcgcc-ggtgggaggggatcagggcttgcct 21851706 Query: 518 cgccgtctctgacacctgcaagaagct 544 ||||| ||| |||||||||| |||||| Sbjct: 21851705 cgccgcctccgacacctgcaggaagct 21851679 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 100 ccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgccg 159 |||||||||||||||||||||||||||||||||| | | ||||||| | ||||||| Sbjct: 21852123 ccatggcggtgagcaacaacatcacggcgtgcgtcaacttcctggcgctggtgtgcgccg 21852064 Query: 160 tccccgtcatcgcctcgggcgtctggttcgc 190 |||| || | ||| |||||||||||||||| Sbjct: 21852063 tcccggtggtggccacgggcgtctggttcgc 21852033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 13647250 acgagtaccgcctcgacggc 13647269 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgccgcctccttgcct 318 |||||||||||||||||||| Sbjct: 10263821 ccgccgccgcctccttgcct 10263840
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 204 bits (103), Expect = 2e-49 Identities = 228/267 (85%), Gaps = 2/267 (0%) Strand = Plus / Minus Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 110025 ttcgccggcgcctactggaaccgccggggcctcctcgccgcctacctcttcgccatggcc 109966 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 ||||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| Sbjct: 109965 gcgctcatcaccctcctcctcgccctcctcgtcttcgccttcgccgtcacccgcccctcc 109906 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||| | ||| ||||| |||||||| |||||||||||||||| ||||| Sbjct: 109905 ggcgcctaccccgccttcgcccgcgcctacgacgactaccgcctcgacggctactccacc 109846 Query: 459 tggctgcgcgggtacgtctccgacgaccc-cgccaggtgggaggggatcaggtcctgcat 517 |||||||| | |||| ||| |||||| |||| ||||||||||||||||| | ||| | Sbjct: 109845 tggctgcgggaccgcgtcgccggcgaccctcgcc-ggtgggaggggatcagggcttgcct 109787 Query: 518 cgccgtctctgacacctgcaagaagct 544 ||||| ||| |||||||||| |||||| Sbjct: 109786 cgccgcctccgacacctgcaggaagct 109760 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 100 ccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgccg 159 |||||||||||||||||||||||||||||||||| | | ||||||| | ||||||| Sbjct: 110204 ccatggcggtgagcaacaacatcacggcgtgcgtcaacttcctggcgctggtgtgcgccg 110145 Query: 160 tccccgtcatcgcctcgggcgtctggttcgc 190 |||| || | ||| |||||||||||||||| Sbjct: 110144 tcccggtggtggccacgggcgtctggttcgc 110114
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 204 bits (103), Expect = 2e-49 Identities = 228/267 (85%), Gaps = 2/267 (0%) Strand = Plus / Minus Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 74429 ttcgccggcgcctactggaaccgccggggcctcctcgccgcctacctcttcgccatggcc 74370 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 ||||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| Sbjct: 74369 gcgctcatcaccctcctcctcgccctcctcgtcttcgccttcgccgtcacccgcccctcc 74310 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||| | ||| ||||| |||||||| |||||||||||||||| ||||| Sbjct: 74309 ggcgcctaccccgccttcgcccgcgcctacgacgactaccgcctcgacggctactccacc 74250 Query: 459 tggctgcgcgggtacgtctccgacgaccc-cgccaggtgggaggggatcaggtcctgcat 517 |||||||| | |||| ||| |||||| |||| ||||||||||||||||| | ||| | Sbjct: 74249 tggctgcgggaccgcgtcgccggcgaccctcgcc-ggtgggaggggatcagggcttgcct 74191 Query: 518 cgccgtctctgacacctgcaagaagct 544 ||||| ||| |||||||||| |||||| Sbjct: 74190 cgccgcctccgacacctgcaggaagct 74164 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 100 ccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgccg 159 |||||||||||||||||||||||||||||||||| | | ||||||| | ||||||| Sbjct: 74608 ccatggcggtgagcaacaacatcacggcgtgcgtcaacttcctggcgctggtgtgcgccg 74549 Query: 160 tccccgtcatcgcctcgggcgtctggttcgc 190 |||| || | ||| |||||||||||||||| Sbjct: 74548 tcccggtggtggccacgggcgtctggttcgc 74518
>dbj|AK070273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046E08, full insert sequence Length = 1216 Score = 204 bits (103), Expect = 2e-49 Identities = 228/267 (85%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 279 ttcgtcggcgcctactggaaccgccgccgcctccttgccttctacctcttcgccatgggg 338 |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 246 ttcgccggcgcctactggaaccgccggggcctcctcgccgcctacctcttcgccatggcc 305 Query: 339 gcgctcatcgccctcctcatcgcgctcctcgtcttcgccttcgccgtcacccgcggctcc 398 ||||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| Sbjct: 306 gcgctcatcaccctcctcctcgccctcctcgtcttcgccttcgccgtcacccgcccctcc 365 Query: 399 ggcgcctacccggtgctcggccgcgagtacgacgagtaccgcctcgacggcttctccatg 458 ||||||||||| | ||| ||||| |||||||| |||||||||||||||| ||||| Sbjct: 366 ggcgcctaccccgccttcgcccgcgcctacgacgactaccgcctcgacggctactccacc 425 Query: 459 tggctgcgcgggtacgtctccgacgaccc-cgccaggtgggaggggatcaggtcctgcat 517 |||||||| | |||| ||| |||||| |||| ||||||||||||||||| | ||| | Sbjct: 426 tggctgcgggaccgcgtcgccggcgaccctcgcc-ggtgggaggggatcagggcttgcct 484 Query: 518 cgccgtctctgacacctgcaagaagct 544 ||||| ||| |||||||||| |||||| Sbjct: 485 cgccgcctccgacacctgcaggaagct 511 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 100 ccatggcggtgagcaacaacatcacggcgtgcgtgacgctgatggcgctcatctgcgccg 159 |||||||||||||||||||||||||||||||||| | | ||||||| | ||||||| Sbjct: 67 ccatggcggtgagcaacaacatcacggcgtgcgtcaacttcctggcgctggtgtgcgccg 126 Query: 160 tccccgtcatcgcctcgggcgtctggttcgc 190 |||| || | ||| |||||||||||||||| Sbjct: 127 tcccggtggtggccacgggcgtctggttcgc 157
>ref|XM_470340.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1000 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 354 ctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| |||||||||||||||||||||| Sbjct: 273 ctcatcgtgctcctcgtcttcgccttcgcc 302
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 354 ctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| |||||||||||||||||||||| Sbjct: 34836581 ctcatcgtgctcctcgtcttcgccttcgcc 34836610 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 18298255 tcgccgtcaccggcggctccggcg 18298232
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 ctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| |||||||||||||||||||||| Sbjct: 26069 ctcatcgtgctcctcgtcttcgccttcgcc 26040
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 354 ctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| |||||||||||||||||||||| Sbjct: 34926653 ctcatcgtgctcctcgtcttcgccttcgcc 34926682 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 18292255 tcgccgtcaccggcggctccggcg 18292232
>dbj|AK061174.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C03, full insert sequence Length = 982 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 354 ctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| |||||||||||||||||||||| Sbjct: 252 ctcatcgtgctcctcgtcttcgccttcgcc 281
>ref|XM_475522.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 367 tcgtcttcgccttcgccgtcacc 389 ||||||||||||||||||||||| Sbjct: 272 tcgtcttcgccttcgccgtcacc 294
>gb|AC124237.13| Mus musculus chromosome 17, clone RP23-281A8, complete sequence Length = 200410 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 31 aagaacacacagcacagcacagc 53 ||||||||||||||||||||||| Sbjct: 96480 aagaacacacagcacagcacagc 96458
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 367 tcgtcttcgccttcgccgtcacc 389 ||||||||||||||||||||||| Sbjct: 1194672 tcgtcttcgccttcgccgtcacc 1194694 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctcctcgtcttcgccttcg 381 |||||||||||||||||||| Sbjct: 28818473 gctcctcgtcttcgccttcg 28818492
>dbj|AK101005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147M12, full insert sequence Length = 2183 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 367 tcgtcttcgccttcgccgtcacc 389 ||||||||||||||||||||||| Sbjct: 421 tcgtcttcgccttcgccgtcacc 443
>dbj|AK068516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M14, full insert sequence Length = 1458 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 367 tcgtcttcgccttcgccgtcacc 389 ||||||||||||||||||||||| Sbjct: 471 tcgtcttcgccttcgccgtcacc 493
>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence Length = 159591 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcaggcacggt 64 ||||||||||||||| ||||||||||| Sbjct: 49310 cacagcacagcacagggcaggcacggt 49336
>emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chromosome 17, complete sequence Length = 193217 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 31 aagaacacacagcacagcacagc 53 ||||||||||||||||||||||| Sbjct: 172554 aagaacacacagcacagcacagc 172532
>gb|AC154433.2| Mus musculus BAC clone RP24-182L23 from chromosome 14, complete sequence Length = 166650 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcaggcacggt 64 ||||||||||||||| ||||||||||| Sbjct: 159997 cacagcacagcacagggcaggcacggt 160023
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 367 tcgtcttcgccttcgccgtcacc 389 ||||||||||||||||||||||| Sbjct: 44958 tcgtcttcgccttcgccgtcacc 44980
>gb|AC069469.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence Length = 172786 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 agaacacacagcacagcacagc 53 |||||||||||||||||||||| Sbjct: 122749 agaacacacagcacagcacagc 122728
>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence Length = 191823 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 agaacacacagcacagcacagc 53 |||||||||||||||||||||| Sbjct: 91553 agaacacacagcacagcacagc 91532 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 agaacacacagcacagcacagc 53 |||||||||||||||||||||| Sbjct: 90925 agaacacacagcacagcacagc 90904
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 368 cgtcttcgccttcgccgtcacccgcg 393 ||||||||||||||||||| |||||| Sbjct: 2212692 cgtcttcgccttcgccgtcgcccgcg 2212667 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 acccggtgctcggccgcgag 425 |||||||||||||||||||| Sbjct: 2555646 acccggtgctcggccgcgag 2555665
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 atcctgctggcggcgctggcgg 276 |||||||||||||||||||||| Sbjct: 4888013 atcctgctggcggcgctggcgg 4887992
>gb|AC093435.3| Drosophila melanogaster 3L BAC RP98-7A5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171689 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 acacacagcacagcacagcgcaggca 60 ||||||||||||||||||| |||||| Sbjct: 49049 acacacagcacagcacagcacaggca 49074
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 259 tgctggcggcgctggcgggtttcgtcggcg 288 ||||||||||||||||||| |||| ||||| Sbjct: 4747720 tgctggcggcgctggcgggattcggcggcg 4747749 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gcacagcacagcgcaggcac 61 |||||||||||||||||||| Sbjct: 3937857 gcacagcacagcgcaggcac 3937876 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gcacagcacagcgcaggcac 61 |||||||||||||||||||| Sbjct: 3937713 gcacagcacagcgcaggcac 3937732 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcgcggctggcgcgctggc 231 |||||||||||||||||||| Sbjct: 3116374 cgcgcggctggcgcgctggc 3116393
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cacacagcacagcacagcgcag 57 |||||||||||||||||||||| Sbjct: 118894 cacacagcacagcacagcgcag 118873
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cacacagcacagcacagcgcag 57 |||||||||||||||||||||| Sbjct: 144713 cacacagcacagcacagcgcag 144692
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete sequence Length = 304975 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 35 acacacagcacagcacagcgcaggca 60 ||||||||||||||||||| |||||| Sbjct: 156098 acacacagcacagcacagcacaggca 156073
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cacacagcacagcacagcgcag 57 |||||||||||||||||||||| Sbjct: 212261 cacacagcacagcacagcgcag 212240
>emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf2r gene for insulin-like growth factor type 2 and L41ps and Au76 pseudogenes Length = 138490 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 cacacagcacagcacagcgcag 57 |||||||||||||||||||||| Sbjct: 128646 cacacagcacagcacagcgcag 128667
>ref|XM_416708.1| PREDICTED: Gallus gallus similar to GC-rich sequence DNA-binding factor candidate isoform 4; GC-rich sequence DNA-binding factor candidate (LOC418500), mRNA Length = 1448 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 ctcctcatcgcgctcctcgtc 371 ||||||||||||||||||||| Sbjct: 78 ctcctcatcgcgctcctcgtc 58
>ref|XM_877096.1| PREDICTED: Bos taurus hypothetical protein LOC614349 (LOC614349), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 tgggggcgctcatcgccctcctcat 358 ||||||||||| ||||||||||||| Sbjct: 902 tgggggcgctcttcgccctcctcat 878
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atcctgctggcggcgctggcg 275 ||||||||||||||||||||| Sbjct: 1147104 atcctgctggcggcgctggcg 1147084
>gb|AE008892.1| Salmonella typhimurium LT2, section 196 of 220 of the complete genome Length = 20385 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cctgctggcggcgctggcggg 277 ||||||||||||||||||||| Sbjct: 1584 cctgctggcggcgctggcggg 1564
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 tcgcgctcctcgtcttcgccttcgc 382 |||||| |||||||||||||||||| Sbjct: 82814 tcgcgcacctcgtcttcgccttcgc 82790
>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 15/20 Length = 264050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cctgctggcggcgctggcggg 277 ||||||||||||||||||||| Sbjct: 155484 cctgctggcggcgctggcggg 155504
>emb|AJ586887.1| Escherichia coli Genomic Island I, strain Nissle 1917 Length = 97552 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atcctgctggcggcgctggcg 275 ||||||||||||||||||||| Sbjct: 7932 atcctgctggcggcgctggcg 7912
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 tgatggcgctcatctgcgccg 159 ||||||||||||||||||||| Sbjct: 659036 tgatggcgctcatctgcgccg 659016
>gb|AE006031.1| Caulobacter crescentus CB15 section 357 of 359 of the complete genome Length = 10388 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tccccgtcatcgcctcgggcg 180 ||||||||||||||||||||| Sbjct: 3905 tccccgtcatcgcctcgggcg 3925
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 tggcggcgctggcgggtttcg 282 ||||||||||||||||||||| Sbjct: 439527 tggcggcgctggcgggtttcg 439507
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 tcatcctgctggcggcgctggcggg 277 |||| |||||||||||||||||||| Sbjct: 1416925 tcattctgctggcggcgctggcggg 1416949
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gtcggcgcctactggaaccgc 302 ||||||||||||||||||||| Sbjct: 984085 gtcggcgcctactggaaccgc 984065
>emb|BX005093.22| Zebrafish DNA sequence from clone CH211-210G13 in linkage group 3, complete sequence Length = 155392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gaacacacagcacagcacagc 53 ||||||||||||||||||||| Sbjct: 154846 gaacacacagcacagcacagc 154866
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 tcgcgctcctcgtcttcgccttcgc 382 |||||| |||||||||||||||||| Sbjct: 20112909 tcgcgcacctcgtcttcgccttcgc 20112885 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcgccgtccccgtcatcgcc 173 |||||||||||||||||||| Sbjct: 24047442 gcgccgtccccgtcatcgcc 24047461
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ctggaaccgccgccgcctcct 313 ||||||||||||||||||||| Sbjct: 1783034 ctggaaccgccgccgcctcct 1783014
>gb|AC084606.1|CBRG44A09 Caenorhabditis briggsae cosmid G44A09, complete sequence Length = 37840 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcggtgagcaacaacatcacg 125 ||||||||||||||||||||| Sbjct: 4914 gcggtgagcaacaacatcacg 4934
>gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome unknown, complete sequence Length = 250515 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 ctcctcatcgcgctcctcgtc 371 ||||||||||||||||||||| Sbjct: 76972 ctcctcatcgcgctcctcgtc 76952
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cctgctggcggcgctggcggg 277 ||||||||||||||||||||| Sbjct: 4105457 cctgctggcggcgctggcggg 4105437
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ctggaaccgccgccgcctcct 313 ||||||||||||||||||||| Sbjct: 35253 ctggaaccgccgccgcctcct 35233
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 ctgctggcggcgctggcgggt 278 ||||||||||||||||||||| Sbjct: 34291 ctgctggcggcgctggcgggt 34311
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cctgctggcggcgctggcggg 277 ||||||||||||||||||||| Sbjct: 3605144 cctgctggcggcgctggcggg 3605164
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cctgctggcggcgctggcggg 277 ||||||||||||||||||||| Sbjct: 4258498 cctgctggcggcgctggcggg 4258478
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcctgctggcggcgctggcg 275 ||||||||||||||||||||| Sbjct: 4411416 atcctgctggcggcgctggcg 4411436
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcctgctggcggcgctggcg 275 ||||||||||||||||||||| Sbjct: 4344195 atcctgctggcggcgctggcg 4344215
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tgcgtgacgctgatggcgct 148 |||||||||||||||||||| Sbjct: 1636376 tgcgtgacgctgatggcgct 1636395
>gb|AC164620.5| Mus musculus BAC clone RP23-64H20 from chromosome 18, complete sequence Length = 182838 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 17708 aacacacagcacagcacagc 17727
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 220902 cacagcacagcacagcgcag 220921
>ref|XM_483796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>ref|XM_483795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>ref|XM_507343.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.48-1 mRNA Length = 2626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>ref|XM_483299.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 452 acgagtaccgcctcgacggc 471
>ref|XM_475957.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3411 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctcctcgtcttcgccttcg 381 |||||||||||||||||||| Sbjct: 78 gctcctcgtcttcgccttcg 97
>ref|XM_468844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1265 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 608 tcgccgtcaccggcggctccggcg 631
>ref|NM_007722.2| Mus musculus chemokine orphan receptor 1 (Cmkor1), mRNA Length = 2581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 1475 cacagcacagcacagcgcag 1456
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgacgagtaccgcctcgacg 447 |||||||||||||||||||| Sbjct: 19720 cgacgagtaccgcctcgacg 19739
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 catcctgctggcggcgctggcggg 277 ||||| |||||||||||||||||| Sbjct: 2322230 catcccgctggcggcgctggcggg 2322207
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 cagggggaggagtgcgcgcggctggcgc 225 ||||||||||||||| ||| |||||||| Sbjct: 28623 cagggggaggagtgctcgctgctggcgc 28650
>gb|AC084326.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-329J17, complete sequence Length = 149941 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 766 cacagcacagcacagcgcag 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 506 cacagcacagcacagcgcag 487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 461 cacagcacagcacagcgcag 442 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 441 cacagcacagcacagcgcag 422
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gcgctcatcgccctcctcatcgcg 362 ||||||||||| |||||||||||| Sbjct: 1903714 gcgctcatcgcgctcctcatcgcg 1903737
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gccctcctcatcgcgctcctcgtc 371 |||||||||||| ||||||||||| Sbjct: 1172353 gccctcctcatctcgctcctcgtc 1172330
>ref|XM_418256.1| PREDICTED: Gallus gallus similar to coagulation factor II receptor-like 3 (LOC420139), mRNA Length = 1569 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cacacagcacagcacagcgc 55 |||||||||||||||||||| Sbjct: 645 cacacagcacagcacagcgc 626
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 32583 cacagcacagcacagcgcag 32602
>gb|AC140315.3| Mus musculus BAC clone RP23-396I19 from chromosome 3, complete sequence Length = 205029 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 105231 cacagcacagcacagcgcag 105250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 105178 cacagcacagcacagcgcag 105197 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 105143 cacagcacagcacagcgcag 105162
>gb|BC015254.1| Mus musculus chemokine orphan receptor 1, mRNA (cDNA clone MGC:18378 IMAGE:4242244), complete cds Length = 1960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 1398 cacagcacagcacagcgcag 1379
>gb|AC135121.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0089M05, complete sequence Length = 131308 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 cagggggaggagtgcgcgcggctggcgc 225 ||||||||||||||| ||| |||||||| Sbjct: 129647 cagggggaggagtgctcgctgctggcgc 129674
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 cgctgatggcgctcatctgcgccg 159 ||||||||||||||| |||||||| Sbjct: 4257255 cgctgatggcgctcaactgcgccg 4257232
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 64686 tcgccgtcaccggcggctccggcg 64663
>gb|AC132944.3| Mus musculus BAC clone RP24-284N8 from chromosome 3, complete sequence Length = 145784 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 35298 cacagcacagcacagcgcag 35317
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 49348 cacagcacagcacagcgcag 49329
>ref|XM_741230.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g01350) partial mRNA Length = 1470 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcgtgcgtgacgctgatg 143 |||||||||||||||||||| Sbjct: 1105 cggcgtgcgtgacgctgatg 1086
>emb|AJ833968.1| Zea mays partial mRNA for hypothetical protein (cuc3 gene), and 3' UTR Length = 1300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 398 acgagtaccgcctcgacggc 417
>emb|AJ833967.1| Zea mays partial mRNA for hypothetical protein (nam2 gene) Length = 1331 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 410 acgagtaccgcctcgacggc 429
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 37015 cacagcacagcacagcgcag 36996
>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence Length = 166128 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 8916 cacagcacagcacagcgcag 8935
>gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosome 18, complete sequence Length = 198519 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 166736 aacacacagcacagcacagc 166755
>gb|AC098881.3| Mus musculus BAC clone RP23-122B20 from 18, complete sequence Length = 226736 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 145364 aacacacagcacagcacagc 145383
>gb|AC122258.4| Mus musculus BAC clone RP23-182F18 from 7, complete sequence Length = 186441 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 70763 cacagcacagcacagcgcag 70782
>emb|CR354389.15| Zebrafish DNA sequence from clone CH211-220J14 in linkage group 8, complete sequence Length = 123378 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctccagccatggcggtgagc 113 |||||||||||||||||||| Sbjct: 44024 ctccagccatggcggtgagc 44043
>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence Length = 195985 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 11734 cacagcacagcacagcgcag 11715
>emb|AL591292.1| Human DNA sequence from clone RP11-99J16 on chromosome 1 Contains the 3' end of the TTC13 gene for tetratricopeptide repeat domain 13, complete sequence Length = 57697 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 26006 aacacacagcacagcacagc 26025
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 catcctgctggcggcgctggcggg 277 |||||||| ||||||||||||||| Sbjct: 637566 catcctgcaggcggcgctggcggg 637589
>gb|AF000236.1| Mus musculus RDC1 orphan chemokine receptor mRNA, complete cds Length = 1861 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 1437 cacagcacagcacagcgcag 1418
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ggcagcggcgagggcgagcc 94 |||||||||||||||||||| Sbjct: 1055414 ggcagcggcgagggcgagcc 1055395
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ccgtccccgtcatcgcctcgggcg 180 |||| ||||||||||||||||||| Sbjct: 301429 ccgtgcccgtcatcgcctcgggcg 301452
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cctgctggcggcgctggcgg 276 |||||||||||||||||||| Sbjct: 336742 cctgctggcggcgctggcgg 336761
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ccgtccccgtcatcgcctcgggcg 180 |||| ||||||||||||||||||| Sbjct: 93794 ccgtgcccgtcatcgcctcgggcg 93817
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cctgctggcggcgctggcgg 276 |||||||||||||||||||| Sbjct: 281987 cctgctggcggcgctggcgg 282006
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ccgtccccgtcatcgcctcgggcg 180 |||| ||||||||||||||||||| Sbjct: 154882 ccgtgcccgtcatcgcctcgggcg 154905
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctgctggcggcgctggcgg 276 |||||||||||||||||||| Sbjct: 84863 cctgctggcggcgctggcgg 84844
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctgctggcggcgctggcgg 276 |||||||||||||||||||| Sbjct: 262645 cctgctggcggcgctggcgg 262626 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 tcgccttcgccgtcacccgcggctccggcgcc 404 ||||| ||||||||| | |||||||||||||| Sbjct: 44813 tcgccgtcgccgtcagcggcggctccggcgcc 44844
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cccgcggctccggcgcctac 407 |||||||||||||||||||| Sbjct: 236063 cccgcggctccggcgcctac 236044
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcgccgtccccgtcatcgcc 173 |||||||||||||||||||| Sbjct: 44421 gcgccgtccccgtcatcgcc 44440
>emb|AJ720396.1| Gallus gallus mRNA for hypothetical protein, clone 16o1 Length = 1455 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ctgctggcggcgctggcggg 277 |||||||||||||||||||| Sbjct: 49 ctgctggcggcgctggcggg 68
>ref|NM_001006557.2| Gallus gallus selenoprotein T (SELT), mRNA Length = 1462 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ctgctggcggcgctggcggg 277 |||||||||||||||||||| Sbjct: 73 ctgctggcggcgctggcggg 92
>gb|AC147797.35| Mus musculus strain C57BL/6J clone rp23-223d3, complete sequence Length = 179282 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 caagaacacacagcacagcacagc 53 |||||||| ||||||||||||||| Sbjct: 314 caagaacagacagcacagcacagc 337
>gb|AE012293.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 201 of 460 of the complete genome Length = 9485 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ctcggccgcgagtacgacga 433 |||||||||||||||||||| Sbjct: 9008 ctcggccgcgagtacgacga 9027
>gb|AE012192.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 100 of 460 of the complete genome Length = 11053 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgcgcggctggcgcgctggc 231 |||||||||||||||||||| Sbjct: 2908 cgcgcggctggcgcgctggc 2889
>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence Length = 191499 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 accagttctaccatcccacc 593 |||||||||||||||||||| Sbjct: 46397 accagttctaccatcccacc 46378
>gb|AC098657.2| Homo sapiens chromosome 1 clone RP11-339A11, complete sequence Length = 158859 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 accagttctaccatcccacc 593 |||||||||||||||||||| Sbjct: 87675 accagttctaccatcccacc 87656
>ref|XM_692793.1| PREDICTED: Danio rerio similar to FKBP12-rapamycin complex-associated protein (FK506-binding protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) (LOC569410), mRNA Length = 4262 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctccagccatggcggtgagc 113 |||||||||||||||||||| Sbjct: 547 ctccagccatggcggtgagc 528
>ref|XM_683827.1| PREDICTED: Danio rerio similar to Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple epidermal growth factor-like domains 3) (LOC560426), mRNA Length = 3642 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tcatcgcgctcctcgtcttc 374 |||||||||||||||||||| Sbjct: 2318 tcatcgcgctcctcgtcttc 2337
>gb|DQ099576.1| Taenia serialis isolate KAP710 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 524 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 348 cacagcacagcacagcgcag 367
>gb|DQ099575.1| Taenia serialis isolate KAP408 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 341 cacagcacagcacagcgcag 360
>gb|DQ099573.1| Taenia serialis isolate KAP407 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 341 cacagcacagcacagcgcag 360
>gb|DQ099572.1| Taenia serialis isolate KAP212 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 341 cacagcacagcacagcgcag 360
>gb|DQ099571.1| Taenia serialis isolate KAP404 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 339 cacagcacagcacagcgcag 358
>gb|AC159296.2| Mus musculus BAC clone RP23-278O17 from chromosome 12, complete sequence Length = 194140 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 61671 cacagcacagcacagcgcag 61652
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcgcggctggcgcgctggc 231 |||||||||||||||||||| Sbjct: 3949522 cgcgcggctggcgcgctggc 3949541 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 ctcggccgcgagtacgacga 433 |||||||||||||||||||| Sbjct: 2753018 ctcggccgcgagtacgacga 2752999
>dbj|AK031100.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930404N18 product:chemokine orphan receptor 1, full insert sequence Length = 2581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 1475 cacagcacagcacagcgcag 1456
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 cagggggaggagtgcgcgcggctggcgc 225 ||||||||||||||| ||| |||||||| Sbjct: 16961901 cagggggaggagtgctcgctgctggcgc 16961928
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 28141473 acgagtaccgcctcgacggc 28141454 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 25346060 acgagtaccgcctcgacggc 25346041
>gb|AC124392.6| Mus musculus BAC clone RP24-441F24 from chromosome 13, complete sequence Length = 159514 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 111558 cacagcacagcacagcgcag 111539 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 111426 cacagcacagcacagcgcag 111407 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 111401 cacagcacagcacagcgcag 111382
>gb|AY130455.1| Petromyzon marinus ribosomal protein L18 mRNA, partial cds Length = 564 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgccttcgccgtcacccgc 392 |||||||||||||||||||| Sbjct: 328 tcgccttcgccgtcacccgc 309
>gb|AE004469.1| Pseudomonas aeruginosa PAO1, section 30 of 529 of the complete genome Length = 10034 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ctggcgggtttcgtcggcgc 289 |||||||||||||||||||| Sbjct: 5962 ctggcgggtttcgtcggcgc 5981
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete sequence Length = 228371 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 222498 cacagcacagcacagcgcag 222479 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 222238 cacagcacagcacagcgcag 222219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 222188 cacagcacagcacagcgcag 222169 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 222168 cacagcacagcacagcgcag 222149
>gb|AF249855.1|AF249855 Plectropomus laevis clone 6.39TG, microsatellite sequence Length = 133 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cacacagcacagcacagcgc 55 |||||||||||||||||||| Sbjct: 96 cacacagcacagcacagcgc 115
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence Length = 208487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 179133 cacagcacagcacagcgcag 179114
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 tcctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| || ||||||||||||||| ||||| Sbjct: 1565195 tcctcatggccctcctcgtcttcgccctcgcc 1565164
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgccgcctccttgcct 318 |||||||||||||||||||| Sbjct: 68048 ccgccgccgcctccttgcct 68067
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 54583 acgagtaccgcctcgacggc 54602
>dbj|AB118785.1| Malassezia pachydermatis gene for intergenic spacer (IGS) 1 region of rRNA gene, partial sequence, strain:IFM52744 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118637.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:CBS 1879 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118622.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52776 Length = 749 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 614 aacacacagcacagcacagc 633
>dbj|AB118621.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52775 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118620.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52774 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118619.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52773 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118617.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52771 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118616.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52770 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118615.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52769 Length = 859 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 615 aacacacagcacagcacagc 634
>dbj|AB118614.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52768 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118613.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52767 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118612.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52766 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118611.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52765 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118605.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52759 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118604.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52758 Length = 898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AB118597.1| Malassezia pachydermatis gene for IGS1, partial sequence, strain:IFM 52750 Length = 862 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aacacacagcacagcacagc 53 |||||||||||||||||||| Sbjct: 619 aacacacagcacagcacagc 638
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 138968 acgagtaccgcctcgacggc 138949
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 24946 acgagtaccgcctcgacggc 24927
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 121245 acgagtaccgcctcgacggc 121226
>dbj|AK120773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008J18, full insert sequence Length = 2626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>emb|AJ493664.1|OSA493664 Oryza sativa mRNA for allene oxide cyclase (aoc gene) Length = 1171 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 583 tcgccgtcaccggcggctccggcg 606
>dbj|AK100131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010A16, full insert sequence Length = 4022 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctcctcgtcttcgccttcg 381 |||||||||||||||||||| Sbjct: 251 gctcctcgtcttcgccttcg 270
>dbj|AK099629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057D07, full insert sequence Length = 2439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>dbj|AK071443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091K18, full insert sequence Length = 1207 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 tcgccgtcacccgcggctccggcg 402 ||||||||||| |||||||||||| Sbjct: 624 tcgccgtcaccggcggctccggcg 647
>dbj|AK069733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H12, full insert sequence Length = 1998 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgagtaccgcctcgacggc 449 |||||||||||||||||||| Sbjct: 514 acgagtaccgcctcgacggc 533
>emb|AL645789.14| Zebrafish DNA sequence from clone RP71-11B17 in linkage group 22, complete sequence Length = 167635 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tcatcgcgctcctcgtcttc 374 |||||||||||||||||||| Sbjct: 23287 tcatcgcgctcctcgtcttc 23306
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 163370 cacagcacagcacagcgcag 163351 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 163287 cacagcacagcacagcgcag 163268
>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete sequence Length = 90767 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcgccgtccccgtcatcgcc 173 |||||||||||||||||||| Sbjct: 13685 gcgccgtccccgtcatcgcc 13704
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 cgctgatggcgctcatctgcgccg 159 ||||||||||||||| |||||||| Sbjct: 5100852 cgctgatggcgctcaactgcgccg 5100829
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tcctgctggcggcgctggcg 275 |||||||||||||||||||| Sbjct: 2475061 tcctgctggcggcgctggcg 2475042
>gb|AC173344.2| Mus musculus BAC clone RP23-222L16 from chromosome 17, complete sequence Length = 191106 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 caagaacacacagcacagcacagc 53 |||||||| ||||||||||||||| Sbjct: 10128 caagaacagacagcacagcacagc 10151
>emb|AL844179.12| Zebrafish DNA sequence from clone DKEY-218M22, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctccagccatggcggtgagc 113 |||||||||||||||||||| Sbjct: 105071 ctccagccatggcggtgagc 105090
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 cagggggaggagtgcgcgcggctggcgc 225 ||||||||||||||| ||| |||||||| Sbjct: 17055668 cagggggaggagtgctcgctgctggcgc 17055695
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 tcctcatcgcgctcctcgtcttcgccttcgcc 383 ||||||| || ||||||||||||||| ||||| Sbjct: 1241065 tcctcatggccctcctcgtcttcgccctcgcc 1241034
>gb|AC122435.5| Mus musculus BAC clone RP24-199D4 from 8, complete sequence Length = 161717 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 71397 cacagcacagcacagcgcag 71416
>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence Length = 198130 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 19402 cacagcacagcacagcgcag 19383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 19270 cacagcacagcacagcgcag 19251 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 19245 cacagcacagcacagcgcag 19226
>emb|BX248132.4| Mouse DNA sequence from clone RP23-209A19 on chromosome 11, complete sequence Length = 30745 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 17226 cacagcacagcacagcgcag 17207 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 17086 cacagcacagcacagcgcag 17067
>emb|AL772358.6| Mouse DNA sequence from clone RP23-397K2 on chromosome 4, complete sequence Length = 173518 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 70028 cacagcacagcacagcgcag 70009 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 69983 cacagcacagcacagcgcag 69964 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 69958 cacagcacagcacagcgcag 69939
>dbj|AP002414.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-815J4, complete sequence Length = 122000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cacagcacagcacagcgcag 57 |||||||||||||||||||| Sbjct: 92947 cacagcacagcacagcgcag 92966
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 cgggctcatcctgctggcggcgct 271 |||| ||||||||||||||||||| Sbjct: 13950 cgggttcatcctgctggcggcgct 13927
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gctcctcgtcttcgccttcg 381 |||||||||||||||||||| Sbjct: 54994 gctcctcgtcttcgccttcg 54975
>dbj|D49553.1|SYOGCR Cyanobacterium DNA Length = 893 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 ccgtccccgtcatcgcctcgggcg 180 ||||||| |||||||||||||||| Sbjct: 863 ccgtcccggtcatcgcctcgggcg 840 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,185,375 Number of Sequences: 3902068 Number of extensions: 4185375 Number of successful extensions: 122969 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116162 Number of HSP's gapped (non-prelim): 6797 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
