ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39f02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 321 bits (162), Expect = 1e-84 Identities = 369/438 (84%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||| ||||||||||||||||||| ||||| |||||||| || |||||||||| ||| Sbjct: 382 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 441 Query: 178 ctcctccaccgcggctacactgtccgcgccaccgtccgggacaccgccgaccccaagaaa 237 |||||| |||||||||||| |||||||||||| ||||||||||| | ||||| |||||| Sbjct: 442 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 501 Query: 238 acgttgcacctgcaggccctggaaggagccaaggagaggctgcacttgttcaaagcaagc 297 || | ||||||| |||||||| |||||||| || || || || |||||| |||||| Sbjct: 502 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 561 Query: 298 ttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgtgtcttccacacg 357 || ||||||| ||| ||||||||||||| || || || || ||||| ||||| ||| Sbjct: 562 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 621 Query: 358 gcttctcccctttatcacaacgtcaaggaccctaaggctgagttacttgacccagcagtc 417 ||||||||| |||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 622 gcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccctgcagtc 681 Query: 418 aatggtacgcccaatgttctccgttcctgcaagaaggcctcaattaagagagtgatcgta 477 || || || | |||||||| | ||||||||||| || || |||| ||||| ||||| Sbjct: 682 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 741 Query: 478 acctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgtggtagtt 537 || |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 742 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 801 Query: 538 gacgagacatggttttca 555 || ||||||||||||||| Sbjct: 802 gatgagacatggttttca 819
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full insert sequence Length = 1334 Score = 321 bits (162), Expect = 1e-84 Identities = 369/438 (84%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||| ||||||||||||||||||| ||||| |||||||| || |||||||||| ||| Sbjct: 195 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 254 Query: 178 ctcctccaccgcggctacactgtccgcgccaccgtccgggacaccgccgaccccaagaaa 237 |||||| |||||||||||| |||||||||||| ||||||||||| | ||||| |||||| Sbjct: 255 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 314 Query: 238 acgttgcacctgcaggccctggaaggagccaaggagaggctgcacttgttcaaagcaagc 297 || | ||||||| |||||||| |||||||| || || || || |||||| |||||| Sbjct: 315 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 374 Query: 298 ttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgtgtcttccacacg 357 || ||||||| ||| ||||||||||||| || || || || ||||| ||||| ||| Sbjct: 375 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 434 Query: 358 gcttctcccctttatcacaacgtcaaggaccctaaggctgagttacttgacccagcagtc 417 ||||||||| |||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 435 gcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccctgcagtc 494 Query: 418 aatggtacgcccaatgttctccgttcctgcaagaaggcctcaattaagagagtgatcgta 477 || || || | |||||||| | ||||||||||| || || |||| ||||| ||||| Sbjct: 495 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 554 Query: 478 acctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgtggtagtt 537 || |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 555 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 614 Query: 538 gacgagacatggttttca 555 || ||||||||||||||| Sbjct: 615 gatgagacatggttttca 632
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full insert sequence Length = 1322 Score = 313 bits (158), Expect = 3e-82 Identities = 368/438 (84%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||| ||||||||||||||||||| ||||| |||||||| || |||||||||| ||| Sbjct: 207 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 266 Query: 178 ctcctccaccgcggctacactgtccgcgccaccgtccgggacaccgccgaccccaagaaa 237 |||||| |||||||||||| |||||||||||| ||||||||||| | ||||| |||||| Sbjct: 267 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 326 Query: 238 acgttgcacctgcaggccctggaaggagccaaggagaggctgcacttgttcaaagcaagc 297 || | ||||||| |||||||| |||||||| || || || || |||||| |||||| Sbjct: 327 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 386 Query: 298 ttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgtgtcttccacacg 357 || ||||||| ||| ||||||||||||| || || || || ||||| ||||| ||| Sbjct: 387 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 446 Query: 358 gcttctcccctttatcacaacgtcaaggaccctaaggctgagttacttgacccagcagtc 417 ||||||||| |||| ||||| || || || || |||||||||||||||||||| |||||| Sbjct: 447 gcttctcccttttaccacaatgttaaagatcccaaggctgagttacttgaccctgcagtc 506 Query: 418 aatggtacgcccaatgttctccgttcctgcaagaaggcctcaattaagagagtgatcgta 477 || || || | |||||||| | ||||||||||| || || |||| ||||| ||||| Sbjct: 507 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 566 Query: 478 acctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgtggtagtt 537 || |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 567 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 626 Query: 538 gacgagacatggttttca 555 || ||||||||||||||| Sbjct: 627 gatgagacatggttttca 644
>gb|AY106077.1| Zea mays PCO149989 mRNA sequence Length = 1282 Score = 244 bits (123), Expect = 3e-61 Identities = 363/443 (81%) Strand = Plus / Plus Query: 112 gggatggggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtc 171 |||| |||||||||||| |||||||||||||| || || |||||||| |||||| | ||| Sbjct: 138 gggacggggaaggtggtttgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 197 Query: 172 aagctcctcctccaccgcggctacactgtccgcgccaccgtccgggacaccgccgacccc 231 | |||||| ||| ||||||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 198 aggctcctactcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 257 Query: 232 aagaaaacgttgcacctgcaggccctggaaggagccaaggagaggctgcacttgttcaaa 291 |||||||| ||||||||| || |||| || || ||||| ||||||||||| || ||| Sbjct: 258 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 317 Query: 292 gcaagcttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgtgtcttc 351 || ||| || | ||||| || ||||||||||||| | || |||||| ||| || Sbjct: 318 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 377 Query: 352 cacacggcttctcccctttatcacaacgtcaaggaccctaaggctgagttacttgaccca 411 || || || |||||| |||||||||| |||||||| ||||||| ||||||||||||||| Sbjct: 378 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 437 Query: 412 gcagtcaatggtacgcccaatgttctccgttcctgcaagaaggcctcaattaagagagtg 471 ||||| || || || | |||||||||| |||| |||||||| || || ||||| | ||| Sbjct: 438 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 497 Query: 472 atcgtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgtg 531 | ||||| ||||| ||||||||||| |||||||| ||| |||||| |||||||| || Sbjct: 498 gttgtaacatcatctatggctgctgtagcctacaacaggaggccaaggactcctgaggtc 557 Query: 532 gtagttgacgagacatggttttc 554 ||||||||||||||||||||| Sbjct: 558 acagttgacgagacatggttttc 580
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 392 aggctgagttacttgacccagcagtcaatggtacgcccaatgttctccgttcctgcaaga 451 ||||||||||||||||||| |||||||| || || | |||||||| | |||||||||| Sbjct: 19007406 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 19007465 Query: 452 aggcctcaattaagagagtgatcgtaacctcatccatggctgctgttgcctacaatggga 511 | || || |||| ||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct: 19007466 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 19007525 Query: 512 agccaagaactcctgatgtggtagttgacgagacatggttttca 555 | ||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 19007526 aaccaagaactcctgatgtagttgttgatgagacatggttttca 19007569 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||| ||||||||||||||||||| ||||| |||||||| || |||||||||| ||| Sbjct: 19006024 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 19006083 Query: 178 ctcctccaccgcggctacactgtccgcgccaccgtccgggacacc 222 |||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 19006084 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacc 19006128 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 148 ggctacatcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgcc 207 |||| ||||| ||| ||||||||| ||||||||| ||||||||||||| |||| |||| Sbjct: 35424295 ggcttcatcggctcgtggctcgtccgcctcctcctcgaccgcggctacaccgtccacgcc 35424354 Query: 208 accgtc 213 |||||| Sbjct: 35424355 accgtc 35424360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 134/169 (79%) Strand = Plus / Plus Query: 226 gaccccaagaaaacgttgcacctgcaggccctggaaggagccaaggagaggctgcacttg 285 ||||| |||||||| | ||||||| |||||||| |||||||| || || || || ||| Sbjct: 19006525 gacccaaagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttg 19006584 Query: 286 ttcaaagcaagcttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgt 345 ||| |||||| || ||||||| ||| ||||||||||||| || || || || ||| Sbjct: 19006585 ttcgaagcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgt 19006644 Query: 346 gtcttccacacggcttctcccctttatcacaacgtcaaggaccctaagg 394 || ||||| |||||||||||| |||| ||||| || || || ||||||| Sbjct: 19006645 gttttccatacggcttctcccttttaccacaatgttaaagatcctaagg 19006693
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 392 aggctgagttacttgacccagcagtcaatggtacgcccaatgttctccgttcctgcaaga 451 ||||||||||||||||||| |||||||| || || | |||||||| | |||||||||| Sbjct: 64449 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 64508 Query: 452 aggcctcaattaagagagtgatcgtaacctcatccatggctgctgttgcctacaatggga 511 | || || |||| ||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct: 64509 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 64568 Query: 512 agccaagaactcctgatgtggtagttgacgagacatggttttca 555 | ||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 64569 aaccaagaactcctgatgtagttgttgatgagacatggttttca 64612 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||| ||||||||||||||||||| ||||| |||||||| || |||||||||| ||| Sbjct: 63067 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 63126 Query: 178 ctcctccaccgcggctacactgtccgcgccaccgtccgggacacc 222 |||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 63127 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacc 63171 Score = 58.0 bits (29), Expect = 3e-05 Identities = 134/169 (79%) Strand = Plus / Plus Query: 226 gaccccaagaaaacgttgcacctgcaggccctggaaggagccaaggagaggctgcacttg 285 ||||| |||||||| | ||||||| |||||||| |||||||| || || || || ||| Sbjct: 63568 gacccaaagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttg 63627 Query: 286 ttcaaagcaagcttgttggaagaaggcactttcgatgctgccatcgccggctgcgactgt 345 ||| |||||| || ||||||| ||| ||||||||||||| || || || || ||| Sbjct: 63628 ttcgaagcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgt 63687 Query: 346 gtcttccacacggcttctcccctttatcacaacgtcaaggaccctaagg 394 || ||||| |||||||||||| |||| ||||| || || || ||||||| Sbjct: 63688 gttttccatacggcttctcccttttaccacaatgttaaagatcctaagg 63736
>emb|X88797.1|EGRNACAD1 E.gunnii mRNA for cinnamyl alcohol dehydrogenase Length = 1225 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||||| |||||||| ||||| || ||| | ||||||||||| ||||||||||||||| Sbjct: 91 gggaaggttgtgtgcgtgaccggggcgtcgcgttacatcgcctcgtggctcgtcaagctc 150 Query: 178 ctcctccaccgcggctacac 197 ||||| || ||||||||||| Sbjct: 151 ctcctgcagcgcggctacac 170
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccac 186 |||||||||||||||||| || | ||||| ||| ||||||||||||||||||||| | Sbjct: 35497 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcc 35556 Query: 187 cgcggctacactgtccgcgccaccgtccg 215 ||||||||| | |||| |||||||||||| Sbjct: 35557 cgcggctacgccgtccacgccaccgtccg 35585 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 153 catcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgccaccgt 212 |||||||||||||||||||||||| |||||| ||| |||||| | |||| ||||||| | Sbjct: 6436 catcgcctcctggctcgtcaagctgctcctctcccgtggctacgccgtccacgccaccct 6495 Query: 213 ccg 215 ||| Sbjct: 6496 ccg 6498 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | ||||| ||| ||||||||||||||||||||| Sbjct: 26410 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctc 26466 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 163 tggctcgtcaagctcctcctccaccgcggctacactgtccgcgccaccgtccg 215 ||||||||||||||||||||| ||| |||||| | |||| ||||||| |||| Sbjct: 42183 tggctcgtcaagctcctcctctcccgtggctacgccgtccacgccaccctccg 42235 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | ||||| ||| ||||||||||| ||||||||| Sbjct: 21825 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctc 21881 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccac 186 |||||||||||||||||| || | | ||| ||| ||||||||| ||||||||||| | Sbjct: 16255 gtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcctctcc 16314 Query: 187 cgcggctac 195 ||||||||| Sbjct: 16315 cgcggctac 16323
>ref|NM_104019.2| Arabidopsis thaliana alcohol dehydrogenase AT1G51410 mRNA, complete cds Length = 978 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 257 tggaaggagccaaggagaggctgcacttgttcaaagcaagcttgttggaagaaggcactt 316 |||||||||| |||| ||||| | ||||||||||||| |||||| ||||||||| ||| Sbjct: 155 tggaaggagcagaggaaaggcttaaattgttcaaagcaaacttgttagaagaaggctctt 214 Query: 317 tcgatgctgccatcgccggctgcgactgtgtcttccacacggcttctcccctttatcaca 376 ||||| | || |||| || ||||| | || |||||||| || || || | ||||| Sbjct: 215 tcgattcagcaatcgatggttgcgaaggagttttccacaccgcatcgccattctatcatg 274 Query: 377 acgtcaaggaccctaaggctgagttacttgacccagcagt 416 |||||||||||||| |||||||||||||||| || ||||| Sbjct: 275 acgtcaaggaccctcaggctgagttacttgatccggcagt 314
>gb|DQ056491.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase (At1g51410) mRNA, complete cds Length = 978 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 257 tggaaggagccaaggagaggctgcacttgttcaaagcaagcttgttggaagaaggcactt 316 |||||||||| |||| ||||| | ||||||||||||| |||||| ||||||||| ||| Sbjct: 155 tggaaggagcagaggaaaggcttaaattgttcaaagcaaacttgttagaagaaggctctt 214 Query: 317 tcgatgctgccatcgccggctgcgactgtgtcttccacacggcttctcccctttatcaca 376 ||||| | || |||| || ||||| | || |||||||| || || || | ||||| Sbjct: 215 tcgattcagcaatcgatggttgcgaaggagttttccacaccgcatcgccattctatcatg 274 Query: 377 acgtcaaggaccctaaggctgagttacttgacccagcagt 416 |||||||||||||| |||||||||||||||| || ||||| Sbjct: 275 acgtcaaggaccctcaggctgagttacttgatccggcagt 314
>emb|AJ234689.1|HVU234689 Hordeum vulgare genomic DNA fragment; clone MWG0973.uni Length = 218 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||| | |||| ||||| ||||||||||||| ||||||||| ||||| Sbjct: 197 tgcgtcaccggcggcagcggcttcatcggctcctggctcgtccgcctcctcctcgaccgc 138 Query: 190 ggctacactgtccgcgccaccgtcc 214 |||||||| |||| ||||||||||| Sbjct: 137 ggctacaccgtccacgccaccgtcc 113
>gb|AY108351.1| Zea mays PCO122024 mRNA sequence Length = 1233 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 151 tacatcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgccacc 210 ||||||||||| ||||||||||||||||||||| ||| |||||||| |||| || |||| Sbjct: 161 tacatcgcctcgtggctcgtcaagctcctcctctcccgtggctacaccgtccacggcacc 220 Query: 211 gtccg 215 ||||| Sbjct: 221 gtccg 225
>gb|AY109696.1| Zea mays CL11616_3 mRNA sequence Length = 986 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 151 tacatcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgccacc 210 |||||||| |||||| |||| | |||||||||| |||| |||||||| |||||||||||| Sbjct: 737 tacatcgcgtcctggatcgttaggctcctcctcgaccgtggctacaccgtccgcgccacc 678 Query: 211 gtccgggacac 221 || || ||||| Sbjct: 677 gtgcgagacac 667
>gb|DQ142643.1| Eucommia ulmoides cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1243 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccac 186 ||||||||||||||||| || || | ||| ||||||||| |||||||| || | ||||| Sbjct: 76 gtgtgcgtcaccggcgcgtctggtttcatagcctcctggatcgtcaagttcttgctccaa 135 Query: 187 cgcggctacactgtccgcgccaccgt 212 ||||||||||| ||||| || ||||| Sbjct: 136 cgcggctacaccgtccgggctaccgt 161
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA, complete cds Length = 1489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||| Sbjct: 214 ggtgtgcgtcaccggcgccggcggcttcatcgcctcgtggctcgtcaagcgcctcct 270
>gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA reductase mRNA, complete cds Length = 1279 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcct 182 |||||||||||||||||| | || |||||||| || |||||||||||||| ||||| Sbjct: 149 gtgtgcgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctcct 204
>gb|AF053084.1|AF053084 Malus domestica putative cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1262 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 118 gggaaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctc 177 |||||||| |||||||||||||| || || || ||||| || || |||||||| ||||| Sbjct: 31 gggaaggtcgtgtgcgtcaccggtgcgtctggatacattgcttcatggctcgttaagctt 90 Query: 178 ctcctccaccgcggctacac 197 || ||||| ||||||||||| Sbjct: 91 cttctccagcgcggctacac 110 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 505 aatgggaagccaagaactcctgatgtggtagttgacgagacatggttt 552 ||||| ||||| ||||||||||||| |||||||| ||||| |||||| Sbjct: 421 aatggaaagcctcgaactcctgatgtagtagttgatgagacttggttt 468
>gb|AC125481.23| Medicago truncatula clone mth2-15n13, complete sequence Length = 121953 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 490 gctgctgttgcctacaatgggaagccaagaactcctgatgtggtagttgacgagacatgg 549 ||||||||||| || ||||||||||| ||||||||||||| || ||||| ||||| ||| Sbjct: 40409 gctgctgttgcttataatgggaagcctcgaactcctgatgttgttgttgatgagacttgg 40350 Query: 550 ttt 552 ||| Sbjct: 40349 ttt 40347 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Minus Query: 490 gctgctgttgcctacaatgggaagccaagaactcctgatgtggtagttgacgagacatgg 549 ||||||||||| ||||||| ||||| ||||||||||||| || ||||| || || ||| Sbjct: 21045 gctgctgttgcgtacaatgaaaagcctcgaactcctgatgttgttgttgatgaaacttgg 20986 Query: 550 ttt 552 ||| Sbjct: 20985 ttt 20983
>gb|AC147775.5| Medicago truncatula clone mth2-13d20, complete sequence Length = 117523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 490 gctgctgttgcctacaatgggaagccaagaactcctgatgtggtagttgacgagacatgg 549 ||||||||||| |||||||| ||||| ||||||||||||| || ||||| ||||| ||| Sbjct: 62425 gctgctgttgcatacaatggaaagcctcgaactcctgatgttgttgttgatgagacttgg 62484 Query: 550 ttt 552 ||| Sbjct: 62485 ttt 62487
>ref|NM_190422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 981 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 148 ggctacatcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgcc 207 |||| ||||| ||| ||||||||| ||||||||| ||||||||||||| |||| |||| Sbjct: 55 ggcttcatcggctcgtggctcgtccgcctcctcctcgaccgcggctacaccgtccacgcc 114 Query: 208 accgtc 213 |||||| Sbjct: 115 accgtc 120
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 148 ggctacatcgcctcctggctcgtcaagctcctcctccaccgcggctacactgtccgcgcc 207 |||| ||||| ||| ||||||||| ||||||||| ||||||||||||| |||| |||| Sbjct: 48244 ggcttcatcggctcgtggctcgtccgcctcctcctcgaccgcggctacaccgtccacgcc 48303 Query: 208 accgtc 213 |||||| Sbjct: 48304 accgtc 48309
>gb|AF033851.1| Vigna radiata aldehyde reductase mRNA, complete cds Length = 1267 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 ||||||||||| || || |||||||| ||||||||||||||| | || ||| | |||||| Sbjct: 65 gtcaccggcgcttccggttacatcgcttcctggctcgtcaagtttcttctcgaacgcggc 124 Query: 193 tacac 197 ||||| Sbjct: 125 tacac 129
>emb|AJ440712.1|LAL440712 Linum album mRNA for cinnamoyl-CoA reductase (ccr gene) Length = 1488 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcct 182 ||||||||||||||| |||| ||||||||||||| ||||||| |||||||| Sbjct: 163 tgcgtcaccggcgccggcggcttcatcgcctcctggatcgtcaaactcctcct 215
>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete sequence Length = 92652 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 257 tggaaggagccaaggagaggctgcacttgttcaaagcaagcttgttggaagaaggcactt 316 |||||||||| |||| ||||| | ||||||||||||| |||||| ||||||||| ||| Sbjct: 80488 tggaaggagcagaggaaaggcttaaattgttcaaagcaaacttgttagaagaaggctctt 80429 Query: 317 tcgat 321 ||||| Sbjct: 80428 tcgat 80424
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full insert sequence Length = 1452 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | ||||| ||| ||||||||||||||||||||| Sbjct: 131 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctc 187
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full insert sequence Length = 1270 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | ||||| ||| ||||||||||||||||||||| Sbjct: 130 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctc 186
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctcca 185 ||||||||| ||||||||| ||||| | | || || ||||||||||||||||||||| Sbjct: 24706382 ggtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctc 24706323 Query: 186 ccgcggct 193 |||||||| Sbjct: 24706322 ccgcggct 24706315 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtc 171 ||||||||||||||||||| |||| | ||||||| ||||||||| Sbjct: 24687297 ggtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtc 24687252 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||||| | | || | ||||| ||| |||||||||||| Sbjct: 26275426 ggtgtgcgtcaccggcggcgctgggttcatcggctcgtggctcgtcaag 26275378 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgt 170 ||||||||||||||| | | | |||| ||||||||| |||||||| Sbjct: 26268646 ggtgtgcgtcaccggaggcgccggcttcatcgcctcgtggctcgt 26268602
>gb|AF297877.1|AF297877 Eucalyptus saligna cinnamoyl-CoA reductase (ccr) gene, complete cds Length = 3016 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 134 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcgagcga 193 Query: 190 ggctacac 197 |||||||| Sbjct: 194 ggctacac 201
>gb|AY098581.1|AY098581S1 Eucalyptus globulus cinnamoyl CoA reductase (CCR) gene, exons 1 and 2 Length = 771 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 40 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcgagcga 99 Query: 190 ggctacac 197 |||||||| Sbjct: 100 ggctacac 107
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctcca 185 ||||||||| ||||||||| ||||| | | || || ||||||||||||||||||||| Sbjct: 40063 ggtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctc 40004 Query: 186 ccgcggct 193 |||||||| Sbjct: 40003 ccgcggct 39996 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtc 171 ||||||||||||||||||| |||| | ||||||| ||||||||| Sbjct: 20978 ggtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtc 20933
>emb|X97433.1|EGCCR1GEN E.gunnii CCR1 gene Length = 3202 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 231 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcgagcga 290 Query: 190 ggctacac 197 |||||||| Sbjct: 291 ggctacac 298
>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full insert sequence Length = 1232 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctcca 185 ||||||||| ||||||||| ||||| | | || || ||||||||||||||||||||| Sbjct: 54 ggtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctc 113 Query: 186 ccgcggct 193 |||||||| Sbjct: 114 ccgcggct 121
>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full insert sequence Length = 1737 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctcca 185 ||||||||| ||||||||| ||||| | | || || ||||||||||||||||||||| Sbjct: 501 ggtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctc 560 Query: 186 ccgcggct 193 |||||||| Sbjct: 561 ccgcggct 568
>gb|AY656821.1| Eucalyptus globulus voucher UTAS1580 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3213 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 105 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcgagcga 164 Query: 190 ggctacac 197 |||||||| Sbjct: 165 ggctacac 172
>gb|AY656820.1| Eucalyptus globulus voucher UTAS1042 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3230 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 84 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcgagcga 143 Query: 190 ggctacac 197 |||||||| Sbjct: 144 ggctacac 151
>gb|AY656819.1| Eucalyptus globulus voucher UTAS1270 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3051 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 77 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcgagcga 136 Query: 190 ggctacac 197 |||||||| Sbjct: 137 ggctacac 144
>gb|AY656818.1| Eucalyptus globulus voucher UTAS1180 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3074 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| |||| ||||||||||||| | |||||||| |||||| | || Sbjct: 74 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcgagcga 133 Query: 190 ggctacac 197 |||||||| Sbjct: 134 ggctacac 141
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 15024553 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 15024503 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | |||||| || ||||||||||||| ||||||| Sbjct: 2033013 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 2032957
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 16196 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 16146
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 93999 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 93949
>dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A12, full insert sequence Length = 1253 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 118 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 168
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full insert sequence Length = 1245 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 123 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 173
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full insert sequence Length = 1265 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||| |||||||||||| | || |||||||| || |||||||||||||| Sbjct: 124 ggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 174
>gb|AY656817.1| Eucalyptus cordata voucher UTAS1498 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3042 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/71 (83%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccac 186 || || |||||||||||| |||| ||||||||||||| | |||||||| |||||| | Sbjct: 78 gtstgygtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctckag 137 Query: 187 cgcggctacac 197 || |||||||| Sbjct: 138 cgaggctacac 148
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 ||||||||||||||| || | |||||| || ||||||||||||||||||||| Sbjct: 214 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 267
>emb|AJ231134.1|SOF231134 Saccharum officinarum mRNA for cinnamoyl-CoA reductase Length = 1511 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||||||||||| || | || ||||||||||| |||||||||||||| Sbjct: 262 gtgtgcgtcaccggtgcggccgggtacatcgcctcgtggctcgtcaagct 311
>gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gene, complete cds Length = 5799 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||||| ||||||||| | || |||||||| || |||||||||||||| Sbjct: 436 gtgtgcgtgaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 485
>gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRNA, complete cds Length = 1395 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagct 176 |||||||| ||||||||| | || |||||||| || |||||||||||||| Sbjct: 225 gtgtgcgtgaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 274
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 ||||||||||||||| || | |||||| || ||||||||||||||||||||| Sbjct: 10712452 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 10712505 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | | ||||||| ||||| ||||||||||||||| Sbjct: 4893882 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 4893826
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 ||||||||||||||| || | |||||| || ||||||||||||||||||||| Sbjct: 9584 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 9637
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full insert sequence Length = 1420 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 ||||||||||||||| || | |||||| || ||||||||||||||||||||| Sbjct: 214 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 267
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccac 186 |||||||||||||||||| || | | ||| ||| ||||||||| ||||||||||| | Sbjct: 105 gtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcctctcc 164 Query: 187 cgcggctacactgtccgcgccaccgtccgggacaccgccgaccccaagaa 236 ||||||||| | |||| ||||| ||||| ||| | | ||| |||||||| Sbjct: 165 cgcggctacgccgtccatgccacggtccgtgacccagacgatcccaagaa 214
>ref|NM_121949.2| Arabidopsis thaliana alcohol dehydrogenase AT5G19440 mRNA, complete cds Length = 1273 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 124 gtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||| || || || ||||| || ||||||||||| |||||||||||| |||| || Sbjct: 98 gtggtgtgtgtaacaggagcctccggttacatcgcctcatggctcgtcaagttcctactt 157 Query: 184 caccgcggctacactgt 200 ||| ||||||||||| Sbjct: 158 agccgtggctacactgt 174 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 452 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 507
>ref|XM_480400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | | ||||||| ||||| ||||||||||||||| Sbjct: 34 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 90
>ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | |||||| || ||||||||||||| ||||||| Sbjct: 273 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 329
>gb|BT024722.1| Arabidopsis thaliana At5g19440 mRNA, complete cds Length = 981 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 124 gtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||| || || || ||||| || ||||||||||| |||||||||||| |||| || Sbjct: 25 gtggtgtgtgtaacaggagcctccggttacatcgcctcatggctcgtcaagttcctactt 84 Query: 184 caccgcggctacactgt 200 ||| ||||||||||| Sbjct: 85 agccgtggctacactgt 101 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 379 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 434
>emb|BX833200.1|CNS09YNN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1140 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 124 gtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||| || || || ||||| || ||||||||||| |||||||||||| |||| || Sbjct: 66 gtggtgtgtgtaacaggagcctccggttacatcgcctcatggctcgtcaagttcctactt 125 Query: 184 caccgcggctacactgt 200 ||| ||||||||||| Sbjct: 126 agccgtggctacactgt 142 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 420 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 475
>gb|AY088448.1| Arabidopsis thaliana clone 6748 mRNA, complete sequence Length = 1205 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 124 gtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||| || || || ||||| || ||||||||||| |||||||||||| |||| || Sbjct: 91 gtggtgtgtgtaacaggagcctccggttacatcgcctcatggctcgtcaagttcctactt 150 Query: 184 caccgcggctacactgt 200 ||| ||||||||||| Sbjct: 151 agccgtggctacactgt 167 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 445 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 500
>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 Length = 103024 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 124 gtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||| || || || ||||| || ||||||||||| |||||||||||| |||| || Sbjct: 83633 gtggtgtgtgtaacaggagcctccggttacatcgcctcatggctcgtcaagttcctactt 83692 Query: 184 caccgcggctacactgt 200 ||| ||||||||||| Sbjct: 83693 agccgtggctacactgt 83709 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 84325 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 84380
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | |||||| || ||||||||||||| ||||||| Sbjct: 68380 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 68324
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | | ||||||| ||||| ||||||||||||||| Sbjct: 53136 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 53080
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | | ||||||| ||||| ||||||||||||||| Sbjct: 98676 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 98620
>dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051O20, full insert sequence Length = 1612 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctc 183 |||||||||||||||||| || | |||||| || ||||||||||||| ||||||| Sbjct: 273 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 329
>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full insert sequence Length = 1342 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 163 tggctcgtcaagctcctcctccaccgcggctacactgtccgcgccaccgtccg 215 ||||||||||||||||||||| ||| |||||| | |||| ||||||| |||| Sbjct: 127 tggctcgtcaagctcctcctctcccgtggctacgccgtccacgccaccctccg 179
>ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 48.1 bits (24), Expect = 0.031 Identities = 63/76 (82%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| || | ||||| || ||| ||||||||||||||||| |||| Sbjct: 118 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 177 Query: 190 ggctacactgtccgcg 205 |||||| | ||||||| Sbjct: 178 ggctacgccgtccgcg 193
>gb|BT013872.1| Lycopersicon esculentum clone 132852F, mRNA sequence Length = 1147 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 254 ccctggaaggagccaaggagaggctgcacttgttcaaagc 293 ||||||| ||||| |||||||| || |||||||||||||| Sbjct: 177 ccctggatggagctaaggagagactccacttgttcaaagc 216 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 504 caatgggaagccaagaactcctgatgtggtagttgacgagacatggt 550 |||||| ||||||||||| ||||| ||||| ||||| || ||||||| Sbjct: 430 caatggcaagccaagaacccctgaagtggtggttgatgaaacatggt 476
>gb|AF278698.1| Lolium perenne cinnamoyl CoA reductase (CCR) mRNA, complete cds Length = 1207 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 127 gtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcct 182 ||||| ||||||||||| | || |||||||| || |||||||||||||| ||||| Sbjct: 52 gtgtgtgtcaccggcgctgccggatacatcgcgtcttggctcgtcaagctgctcct 107
>emb|AL109811.40|HSJ635E18 Human DNA sequence from clone RP4-635E18 on chromosome 1p36.11-36.31 Contains the TARDBP gene for TAR DNA binding protein, the MASP2 gene for mannan-binding lectin serine protease 2, the SRM gene for spermidine synthase, the PMSCL2 gene for 100kDa polymyositis/scleroderma autoantigen 2 (FLJ41371, FLJ36636, two novel genes (FLJ30609), the 3' end of the FRAP1 gene for FK506 binding protein 12-rapamycin associated protein 1 and a CpG island, complete sequence Length = 112769 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccacccatcct 43 |||||||||||||||||||||||| Sbjct: 36204 cctacctacccacccacccatcct 36181
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.031 Identities = 63/76 (82%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| || | ||||| || ||| ||||||||||||||||| |||| Sbjct: 4497228 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 4497287 Query: 190 ggctacactgtccgcg 205 |||||| | ||||||| Sbjct: 4497288 ggctacgccgtccgcg 4497303
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 48.1 bits (24), Expect = 0.031 Identities = 63/76 (82%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| || | ||||| || ||| ||||||||||||||||| |||| Sbjct: 32607 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 32666 Query: 190 ggctacactgtccgcg 205 |||||| | ||||||| Sbjct: 32667 ggctacgccgtccgcg 32682
>emb|X79566.1|EGCCR E.gunnii CCR mRNA Length = 1210 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| || | ||||||||||||| | |||||||| |||||| | || Sbjct: 85 tgcgtcaccggcgccggcgggttcatcgcctcctggattgtcaagcttctcctcgagcga 144 Query: 190 ggctacac 197 |||||||| Sbjct: 145 ggctacac 152
>dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M01, full insert sequence Length = 1335 Score = 48.1 bits (24), Expect = 0.031 Identities = 63/76 (82%) Strand = Plus / Plus Query: 130 tgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgc 189 ||||||||||||||| || | ||||| || ||| ||||||||||||||||| |||| Sbjct: 118 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 177 Query: 190 ggctacactgtccgcg 205 |||||| | ||||||| Sbjct: 178 ggctacgccgtccgcg 193
>gb|AY911854.1| Nicotiana tabacum cinnamyl alcohol dehydrogenase 1 (CAD1-1) mRNA, complete cds Length = 972 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 262 ggagccaaggagaggctgcacttgttcaaagc 293 ||||| ||||||||||| |||||||||||||| Sbjct: 151 ggagctaaggagaggcttcacttgttcaaagc 182 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 518 gaactcctgatgtggtagttgacgagacatgg 549 |||| ||||| ||||||||||| ||||||||| Sbjct: 410 gaacccctgaagtggtagttgatgagacatgg 441
>dbj|D85102.1|ROZD4R Rosa hybrida mRNA for dihydroflavonol 4-reductase, complete cds Length = 1333 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 185 accgcggctacactgtccgcgccaccgt 212 ||||||||||||||||||| |||||||| Sbjct: 172 accgcggctacactgtccgagccaccgt 199
>gb|BT017258.1| Zea mays clone EL01N0308E04.c mRNA sequence Length = 1137 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 catcgcctcctggctcgtcaagc 175 ||||||||||||||||||||||| Sbjct: 74 catcgcctcctggctcgtcaagc 96
>gb|AC117724.14| Mus musculus chromosome 5, clone RP24-347F19, complete sequence Length = 183083 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatcc 42 ||||||||||||||||||||||| Sbjct: 68593 cctacctacccacccacccatcc 68615
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 490 gctgctgttgcctacaatgggaagccaagaactcctgatgtggtagttgacgagacatgg 549 ||||||||||| ||||||| ||||| ||||||||||||| || ||||| || || ||| Sbjct: 5252 gctgctgttgcgtacaatgaaaagcctcgaactcctgatgttgttgttgatgaaacttgg 5311 Query: 550 ttt 552 ||| Sbjct: 5312 ttt 5314
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 125 tggtgtgcgtcaccggcgcctcgggct 151 |||||||||||||||||| |||||||| Sbjct: 70808 tggtgtgcgtcaccggcgtctcgggct 70782
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 125 tggtgtgcgtcaccggcgcctcgggct 151 |||||||||||||||||| |||||||| Sbjct: 70798 tggtgtgcgtcaccggcgtctcgggct 70772
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 125 tggtgtgcgtcaccggcgcctcgggct 151 |||||||||||||||||| |||||||| Sbjct: 38477 tggtgtgcgtcaccggcgtctcgggct 38451
>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence Length = 199776 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatcc 42 ||||||||||||||||||||||| Sbjct: 46867 cctacctacccacccacccatcc 46889 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 46898 acctacccacccacccatcc 46917
>emb|BX511312.6| Zebrafish DNA sequence from clone DKEY-76K14 in linkage group 15, complete sequence Length = 40687 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatcc 42 ||||||||||||||||||||||| Sbjct: 18845 cctacctacccacccacccatcc 18867
>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence Length = 163503 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tccacagtcctacctacccacccacccatcc 42 ||||| |||||||| |||||||||||||||| Sbjct: 141235 tccactgtcctacccacccacccacccatcc 141205
>gb|AY104257.1| Zea mays PCO144021 mRNA sequence Length = 1213 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 catcgcctcctggctcgtcaagc 175 ||||||||||||||||||||||| Sbjct: 185 catcgcctcctggctcgtcaagc 207
>gb|AC119183.8| Mus musculus chromosome 15, clone RP24-172H2, complete sequence Length = 144236 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tccacagtcctacctacccacccacccatcc 42 ||||| |||||||| |||||||||||||||| Sbjct: 3547 tccactgtcctacccacccacccacccatcc 3517
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatcc 42 ||||||||||||||||||||||| Sbjct: 110567 cctacctacccacccacccatcc 110589
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cctcctggctcgtcaagctcct 179 |||||||||||||||||||||| Sbjct: 128254 cctcctggctcgtcaagctcct 128275
>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence Length = 185786 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 acctacccacccacccatcctctcct 48 |||||||||||||||||||| ||||| Sbjct: 111769 acctacccacccacccatccactcct 111744
>gb|AC128668.4| Mus musculus BAC clone RP24-81D14 from chromosome 8, complete sequence Length = 211075 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 acccacccacccatcctctcct 48 |||||||||||||||||||||| Sbjct: 104571 acccacccacccatcctctcct 104592
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence Length = 227254 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 acctacccacccacccatcctctcct 48 |||||||||||||||||||| ||||| Sbjct: 28320 acctacccacccacccatccactcct 28345
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cctcctggctcgtcaagctcct 179 |||||||||||||||||||||| Sbjct: 21623360 cctcctggctcgtcaagctcct 21623381
>gb|AC132253.5| Mus musculus BAC clone RP24-456H22 from chromosome 19, complete sequence Length = 194083 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 acccacccacccatcctctcct 48 |||||||||||||||||||||| Sbjct: 93137 acccacccacccatcctctcct 93116
>ref|XM_541003.2| PREDICTED: Canis familiaris similar to Secretin receptor precursor (SCT-R) (LOC483883), mRNA Length = 1335 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 caggccctggaaggagccaagg 271 |||||||||||||||||||||| Sbjct: 1119 caggccctggaaggagccaagg 1098
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cctcctggctcgtcaagctcct 179 |||||||||||||||||||||| Sbjct: 11605 cctcctggctcgtcaagctcct 11626
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ggtggtgtgcgtcaccggcgcc 144 |||||||||||||||||||||| Sbjct: 118047 ggtggtgtgcgtcaccggcgcc 118068
>gb|AC157932.8| Mus musculus chromosome 5, clone RP24-188B2, complete sequence Length = 168685 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 19 tcctacctacccacccacccatcctctcct 48 ||||||| |||||||||||||||| ||||| Sbjct: 81278 tcctacccacccacccacccatccgctcct 81249
>dbj|AK126637.1| Homo sapiens cDNA FLJ44679 fis, clone BRACE3009416, highly similar to Homo sapiens testis specific ankyrin-like protein 1 Length = 4762 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 573 ctacctacccacccacccatcc 594
>dbj|AK124879.1| Homo sapiens cDNA FLJ42889 fis, clone BRHIP3008313, highly similar to Homo sapiens testis specific ankyrin-like protein 1 Length = 4310 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 121 ctacctacccacccacccatcc 142
>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete sequence Length = 210153 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 28525 ctacctacccacccacccatcc 28546
>emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in linkage group 7, complete sequence Length = 209042 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 44138 ctacctacccacccacccatcc 44159
>emb|CR352509.1| Gallus gallus finished cDNA, clone ChEST178h13 Length = 1210 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccacccatc 41 |||||||||||||||||||||| Sbjct: 143 cctacctacccacccacccatc 122
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cctcctggctcgtcaagctcct 179 |||||||||||||||||||||| Sbjct: 21616389 cctcctggctcgtcaagctcct 21616410
>gb|AY787020.1| Gallus gallus RING finger protein 13 (RNF13) gene, complete cds Length = 33258 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatc 41 |||||||||||||||||||||| Sbjct: 4651 cctacctacccacccacccatc 4672
>gb|AY227672.1| Zea mays genotype Mo17 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1243 gcctcctggctcgtcaagcgcctcct 1268
>gb|AY227671.1| Zea mays genotype F288 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2942 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1249 gcctcctggctcgtcaagcgcctcct 1274
>gb|AY227670.1| Zea mays genotype MBS847 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1243 gcctcctggctcgtcaagcgcctcct 1268
>gb|AY227669.1| Zea mays genotype F271 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1243 gcctcctggctcgtcaagcgcctcct 1268
>gb|AY227668.1| Zea mays genotype F7025 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1204 gcctcctggctcgtcaagcgcctcct 1229
>gb|AY227029.1| Zea mays genotype B73 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2966 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 1233 gcctcctggctcgtcaagcgcctcct 1258
>gb|AC124862.4| Homo sapiens BAC clone RP11-27M15 from 2, complete sequence Length = 160111 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 107991 ctacctacccacccacccatcc 108012
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtc 171 ||||||||||||||||||| |||| | ||||||| ||||||||| Sbjct: 170490 ggtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtc 170445
>emb|Y15069.1|ZMCCR2 Zea mays mRNA for cinnamoyl-CoA reductase Length = 1468 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctcctggctcgtcaagctcctcct 182 ||||||||||||||||||| |||||| Sbjct: 210 gcctcctggctcgtcaagcgcctcct 235
>dbj|AK107469.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B02, full insert sequence Length = 1507 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtc 171 ||||||||||||||||||| |||| | ||||||| ||||||||| Sbjct: 80 ggtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtc 125
>emb|CR847539.12| Zebrafish DNA sequence from clone DKEY-96K10 in linkage group 7, complete sequence Length = 104861 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctacctacccacccacccatcc 42 |||||||||||||||||||||| Sbjct: 43120 ctacctacccacccacccatcc 43141
>emb|AL591490.12| Mouse DNA sequence from clone RP23-144O20 on chromosome 2, complete sequence Length = 192082 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 acctacccacccacccatcctctcct 48 |||| ||||||||||||||||||||| Sbjct: 93791 acctgcccacccacccatcctctcct 93766
>emb|AL591032.19| Mouse DNA sequence from clone RP22-211A10 on chromosome 4, complete sequence Length = 205573 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 gtcctacctacccacccaccca 39 |||||||||||||||||||||| Sbjct: 128230 gtcctacctacccacccaccca 128209
>emb|AL606977.28| Mouse DNA sequence from clone RP23-284L6 on chromosome 4, complete sequence Length = 199429 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 gtcctacctacccacccaccca 39 |||||||||||||||||||||| Sbjct: 155716 gtcctacctacccacccaccca 155695
>gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosome 19, complete sequence Length = 192550 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 acccacccacccatcctctcc 47 ||||||||||||||||||||| Sbjct: 114071 acccacccacccatcctctcc 114091
>ref|XM_479046.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||| ||| | |||||||| || | |||||||||||| Sbjct: 60 ggtgtgcgtcaccggagccgccggctacattgcgacatggctcgtcaag 108
>gb|AC147233.3| Mus musculus BAC clone RP23-350J18 from chromosome 8, complete sequence Length = 185319 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 acccacccacccatcctctccttcc 51 |||||||||||||||| |||||||| Sbjct: 136156 acccacccacccatccactccttcc 136180
>gb|AC125268.10| Mus musculus chromosome 1, clone RP23-127L7, complete sequence Length = 233529 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 cctacctacccacccacccatcctctcct 48 |||||||||||||||||||| || ||||| Sbjct: 30178 cctacctacccacccacccacccactcct 30206
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 ctcaattaagagagtgatcgt 476 ||||||||||||||||||||| Sbjct: 4251839 ctcaattaagagagtgatcgt 4251819
>gb|AC130837.4| Mus musculus BAC clone RP24-157P23 from chromosome 8, complete sequence Length = 155270 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 acccacccacccatcctctccttcc 51 |||||||||||||||| |||||||| Sbjct: 121307 acccacccacccatccactccttcc 121283
>gb|AC122794.3| Mus musculus BAC clone RP24-202L5 from chromosome 8, complete sequence Length = 157120 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccacccacccatcctctcctt 49 ||||||||||||||||||||| Sbjct: 43443 ccacccacccatcctctcctt 43423
>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence Length = 208678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccacccacccatcctctcct 48 ||||||||||||||||||||| Sbjct: 123763 cccacccacccatcctctcct 123783
>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence Length = 181761 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 acccacccacccatcctctccttcc 51 ||||||||||||| ||||||||||| Sbjct: 76126 acccacccacccaccctctccttcc 76102
>emb|AL353725.14| Human DNA sequence from clone RP11-218C11 on chromosome 10, complete sequence Length = 61524 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 tacctacccacccacccatcctctccttc 50 ||||||| ||||||||||||| ||||||| Sbjct: 32901 tacctactcacccacccatccactccttc 32929
>emb|AL096755.1|HS477J10A Human DNA sequence from clone RP3-477J10 on chromosome 22q13.31-13.33, complete sequence Length = 96678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cccacccacccatcctctcct 48 ||||||||||||||||||||| Sbjct: 49329 cccacccacccatcctctcct 49349
>gb|AC156268.10| Mus musculus 10 BAC RP24-336P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164611 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 cctacccacccacccatcctctcct 48 ||||||||||||||||||| ||||| Sbjct: 74427 cctacccacccacccatccactcct 74403
>gb|AC025183.5| Homo sapiens chromosome 5 clone CTD-2194D22, complete sequence Length = 52443 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 gcacctgcaggccctggaaggagcc 267 |||||||||||||||||| |||||| Sbjct: 27945 gcacctgcaggccctggatggagcc 27921
>dbj|AB218718.1| Prunus mume Pm15 mRNA for Cinnamyl alcohol dehydrogenase, complete cds Length = 1321 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 121 aaggtggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctc 180 ||||| || ||||||||||| || || || ||||| || || |||||||| |||||||| Sbjct: 62 aaggtcgtctgcgtcaccggtgcgtccggttacattgcttcatggctcgtgaagctcctt 121 Query: 181 ctccaccgcggctacactgtc 201 || || |||| ||||||||| Sbjct: 122 cttcaaggcggttacactgtc 142
>gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, complete sequence Length = 270578 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 acccacccacccatcctctccttcc 51 ||||||||||||| ||||||||||| Sbjct: 61810 acccacccacccaccctctccttcc 61834
>emb|AL114020.1|CNS01BBG Botrytis cinerea strain T4 cDNA library Length = 696 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ctcgtcaagctcctcctccac 186 ||||||||||||||||||||| Sbjct: 120 ctcgtcaagctcctcctccac 140
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||| ||| | |||||||| || | |||||||||||| Sbjct: 24474356 ggtgtgcgtcaccggagccgccggctacattgcgacatggctcgtcaag 24474308 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 cctacccacccacccatcctctcc 47 |||| ||||||||||||||||||| Sbjct: 27641030 cctatccacccacccatcctctcc 27641053 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 325 gccatcgccggctgcgactgtgtcttcc 352 ||||||||||||||||||| ||||||| Sbjct: 24524400 gccatcgccggctgcgacttcgtcttcc 24524373 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcctcctccaccgcggctac 195 |||||||||||||||||||| Sbjct: 8320452 tcctcctccaccgcggctac 8320471
>emb|BX293558.19| Mouse DNA sequence from clone RP23-182P17 on chromosome 2, complete sequence Length = 157273 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tcctacctacccacccaccca 39 ||||||||||||||||||||| Sbjct: 15669 tcctacctacccacccaccca 15689
>emb|AL662923.21| Mouse DNA sequence from clone RP23-25A3 on chromosome X, complete sequence Length = 211977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tcctacctacccacccaccca 39 ||||||||||||||||||||| Sbjct: 78184 tcctacctacccacccaccca 78204
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 ctcaattaagagagtgatcgt 476 ||||||||||||||||||||| Sbjct: 4109157 ctcaattaagagagtgatcgt 4109137
>emb|AL592405.7| Mouse DNA sequence from clone RP23-358N17 on chromosome 2, complete sequence Length = 165818 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 cctacccacccacccatcctctcct 48 ||||||||||||||||||| ||||| Sbjct: 126516 cctacccacccacccatccactcct 126492
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||||| | | || | ||||| ||| |||||||||||| Sbjct: 139966 ggtgtgcgtcaccggcggcgctgggttcatcggctcgtggctcgtcaag 139918 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgt 170 ||||||||||||||| | | | |||| ||||||||| |||||||| Sbjct: 133186 ggtgtgcgtcaccggaggcgccggcttcatcgcctcgtggctcgt 133142
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||| ||| | |||||||| || | |||||||||||| Sbjct: 24166 ggtgtgcgtcaccggagccgccggctacattgcgacatggctcgtcaag 24118
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||| ||| | |||||||| || | |||||||||||| Sbjct: 100223 ggtgtgcgtcaccggagccgccggctacattgcgacatggctcgtcaag 100175
>emb|BX572082.4| Mouse DNA sequence from clone RP23-114B24 on chromosome X, complete sequence Length = 88681 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccat 40 ||||||||||||||||||||| Sbjct: 15145 cctacctacccacccacccat 15165
>dbj|AK099340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N22, full insert sequence Length = 1300 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||||| | | || | ||||| ||| |||||||||||| Sbjct: 97 ggtgtgcgtcaccggcggcgctgggttcatcggctcgtggctcgtcaag 145
>dbj|AK065812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038A03, full insert sequence Length = 1389 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgt 170 ||||||||||||||| | | | |||| ||||||||| |||||||| Sbjct: 74 ggtgtgcgtcaccggaggcgccggcttcatcgcctcgtggctcgt 118
>emb|BX649455.14| Zebrafish DNA sequence from clone CH211-151J12 in linkage group 4, complete sequence Length = 116689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccacccat 40 ||||||||||||||||||||| Sbjct: 73008 cctacctacccacccacccat 73028
>dbj|AK063834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B06, full insert sequence Length = 1370 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||||| | | || | ||||| ||| |||||||||||| Sbjct: 154 ggtgtgcgtcaccggcggcgctgggttcatcggctcgtggctcgtcaag 202
>dbj|AK062499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-A06, full insert sequence Length = 1393 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 126 ggtgtgcgtcaccggcgcctcgggctacatcgcctcctggctcgtcaag 174 ||||||||||||||| ||| | |||||||| || | |||||||||||| Sbjct: 60 ggtgtgcgtcaccggagccgccggctacattgcgacatggctcgtcaag 108
>gb|AC144949.5| Mus musculus BAC clone RP23-136C19 from chromosome 19, complete sequence Length = 203311 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 acccacccacccatcctctcc 47 ||||||||||||||||||||| Sbjct: 12366 acccacccacccatcctctcc 12386
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 ctctccttccgagcctccacc 62 ||||||||||||||||||||| Sbjct: 129504 ctctccttccgagcctccacc 129524
>emb|AM159096.1| Plantago major partial mRNA for cinnamoyl alcohol dehydrogenase (cad3 gene) Length = 684 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 490 gctgctgttgcctacaatgggaagccaagaactcctgatgtggtagttgacgagacatgg 549 ||||||||||| |||| ||| || || |||| ||||| ||||||||||| ||||| ||| Sbjct: 44 gctgctgttgcttacagtggtaaacctcgaacacctgacgtggtagttgatgagacttgg 103 Query: 550 t 550 | Sbjct: 104 t 104
>gb|AC144914.18| Mus musculus chromosome 5, clone RP24-210D14, complete sequence Length = 159643 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 cccacccacccatcctctccttccg 52 ||||||||||||||| ||||||||| Sbjct: 105051 cccacccacccatccactccttccg 105075
>gb|AY911855.1| Nicotiana tabacum cinnamyl alcohol dehydrogenase 1 (CAD1-7) mRNA, complete cds Length = 984 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 gagaggctgcacttgttcaaagcaa 295 |||||||| |||||||||||||||| Sbjct: 166 gagaggcttcacttgttcaaagcaa 190
>ref|NM_125235.2| Arabidopsis thaliana cinnamoyl-CoA reductase AT5G58490 mRNA, complete cds Length = 1164 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 77 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 136 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 137 tactccgtccacgccaccgt 156
>gb|AC152978.1| Mus musculus BAC RP23-111A15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180393 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 72917 cctacctacccacccaccca 72936
>gb|AC159309.2| Mus musculus BAC clone RP23-157H14 from chromosome 16, complete sequence Length = 201546 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 178506 cctacctacccacccaccca 178487
>ref|XM_474004.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 537 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tgccatcgccggctgcgact 343 |||||||||||||||||||| Sbjct: 219 tgccatcgccggctgcgact 238
>ref|NM_213588.1| Gallus gallus IL-12p35 subunit (LOC407090), mRNA Length = 618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggccctggaaggagccaagg 271 |||||||||||||||||||| Sbjct: 520 ggccctggaaggagccaagg 501
>ref|NM_186842.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1048 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcctcctccaccgcggctac 195 |||||||||||||||||||| Sbjct: 327 tcctcctccaccgcggctac 346
>ref|XM_506242.1| PREDICTED Oryza sativa (japonica cultivar-group), P0021G06.107 mRNA Length = 1123 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcctcctccaccgcggctac 195 |||||||||||||||||||| Sbjct: 401 tcctcctccaccgcggctac 420
>gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, complete sequence Length = 180715 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 19744 cctacctacccacccaccca 19763
>gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, complete sequence Length = 153996 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 116826 acctacccacccacccatcc 116807
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 acccacccatcctctccttc 50 |||||||||||||||||||| Sbjct: 124058 acccacccatcctctccttc 124077
>gb|AC156992.13| Mus musculus chromosome 7, clone RP23-474C17, complete sequence Length = 178169 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 98371 acctacccacccacccatcc 98390
>gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, complete sequence Length = 186003 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 34557 acctacccacccacccatcc 34576
>gb|BC106958.1| Homo sapiens cDNA clone IMAGE:40036244 Length = 461 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 70 cctacctacccacccaccca 51
>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence Length = 168400 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 122096 acctacccacccacccatcc 122115
>gb|AC122792.10| Mus musculus, clone RP24-268A16, complete sequence Length = 160410 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 152667 cctacctacccacccaccca 152648
>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence Length = 180597 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 128465 cctacctacccacccaccca 128446
>gb|AC124717.3| Mus musculus BAC clone RP24-147K15 from chromosome 18, complete sequence Length = 204165 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 37640 cctacctacccacccaccca 37621
>gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183897 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 8741 acctacccacccacccatcc 8722
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tacctacccacccacccatc 41 |||||||||||||||||||| Sbjct: 5013 tacctacccacccacccatc 4994
>gb|AY262751.1| Gallus gallus IL-12p35 subunit mRNA, complete cds Length = 618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggccctggaaggagccaagg 271 |||||||||||||||||||| Sbjct: 520 ggccctggaaggagccaagg 501
>gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome 19, complete sequence Length = 184164 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 90085 acctacccacccacccatcc 90104 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 89869 acctacccacccacccatcc 89888 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 89765 acctacccacccacccatcc 89784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 89629 acctacccacccacccatcc 89648 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 89481 acctacccacccacccatcc 89500
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 27758 acctacccacccacccatcc 27739 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 27590 acctacccacccacccatcc 27571 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 27234 acctacccacccacccatcc 27215
>gb|AC009127.10| Homo sapiens chromosome 16 clone RP11-498D10, complete sequence Length = 173128 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 152397 cctacctacccacccaccca 152416
>gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome 3, complete sequence Length = 195731 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tacctacccacccacccatc 41 |||||||||||||||||||| Sbjct: 1747 tacctacccacccacccatc 1766
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 84914 cctacctacccacccaccca 84933
>gb|AC126025.4| Mus musculus BAC clone RP24-461L18 from chromosome 14, complete sequence Length = 164636 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cctacccacccacccatcct 43 |||||||||||||||||||| Sbjct: 90099 cctacccacccacccatcct 90080
>gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosome 14, complete sequence Length = 178534 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 ggaaggagccaaggagaggctgca 281 ||||||||||||||||||| |||| Sbjct: 110479 ggaaggagccaaggagaggatgca 110456
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 189063 acctacccacccacccatcc 189082
>gb|AC132379.3| Mus musculus BAC clone RP23-412C9 from chromosome 1, complete sequence Length = 188978 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cctacccacccacccatcctctcc 47 ||||||||||||||||||| |||| Sbjct: 91330 cctacccacccacccatccactcc 91307
>gb|AF349725.1| Desmodesmus pirkollei 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cttgttcaaagcaagcttgt 301 |||||||||||||||||||| Sbjct: 106 cttgttcaaagcaagcttgt 125
>gb|AC122453.4| Mus musculus BAC clone RP24-258A18 from chromosome 17, complete sequence Length = 177389 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cccacccacccatcctctccttcc 51 |||||||||||| ||||||||||| Sbjct: 108557 cccacccacccagcctctccttcc 108534
>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence Length = 165927 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 33337 cctacctacccacccaccca 33318
>gb|BC004563.2| Homo sapiens hypothetical protein LOC55565, mRNA (cDNA clone IMAGE:4053325), partial cds Length = 1981 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 1647 cctacctacccacccaccca 1666
>gb|AC125094.5| Mus musculus BAC clone RP24-176L12 from chromosome 16, complete sequence Length = 170842 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cctacccacccacccatcctctcc 47 ||||||||||||||||||| |||| Sbjct: 65074 cctacccacccacccatccactcc 65051
>emb|CR729544.2|CNS0GPV2 Tetraodon nigroviridis full-length cDNA Length = 1578 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ctcctcctccaccgcggcta 194 |||||||||||||||||||| Sbjct: 569 ctcctcctccaccgcggcta 588
>emb|CR726694.2|CNS0GNNW Tetraodon nigroviridis full-length cDNA Length = 1579 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ctcctcctccaccgcggcta 194 |||||||||||||||||||| Sbjct: 566 ctcctcctccaccgcggcta 585
>emb|CR726036.2|CNS0GN5M Tetraodon nigroviridis full-length cDNA Length = 1567 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ctcctcctccaccgcggcta 194 |||||||||||||||||||| Sbjct: 564 ctcctcctccaccgcggcta 583
>gb|AC098730.3| Mus musculus BAC clone RP23-3J2 from 1, complete sequence Length = 226460 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cctacccacccacccatcctctcc 47 ||||||||||||||||||| |||| Sbjct: 210389 cctacccacccacccatccactcc 210366
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 95981 acctacccacccacccatcc 96000
>gb|AC110240.8| Mus musculus chromosome 3, clone RP23-113O9, complete sequence Length = 237590 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctacctacccacccacccat 40 |||||||||||||||||||| Sbjct: 38267 ctacctacccacccacccat 38248
>gb|AC078791.8| Homo sapiens BAC clone RP11-211J15 from 7, complete sequence Length = 83898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 59397 cctacctacccacccaccca 59416
>gb|BC012116.1| Homo sapiens hypothetical protein LOC55565, mRNA (cDNA clone MGC:20131 IMAGE:4553333), complete cds Length = 1843 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 1524 cctacctacccacccaccca 1543
>gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, complete sequence Length = 212928 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 106250 cctacctacccacccaccca 106231
>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190140 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tcctacctacccacccacccatcc 42 ||||||| |||||||||||||||| Sbjct: 68823 tcctacccacccacccacccatcc 68800
>gb|AC131172.4| Rattus norvegicus 5 BAC CH230-12K15 (Children's Hospital Oakland Research Institute) complete sequence Length = 230561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 163610 cctacctacccacccaccca 163591
>emb|CR392025.7| Zebrafish DNA sequence from clone CH211-248P17 in linkage group 17, complete sequence Length = 158863 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 32931 cctacctacccacccaccca 32912
>gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, complete sequence Length = 186588 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 109692 cctacctacccacccaccca 109711
>gb|BC091492.1| Homo sapiens hypothetical protein LOC55565, mRNA (cDNA clone IMAGE:30387263), with apparent retained intron Length = 1807 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 1420 cctacctacccacccaccca 1439
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggaaggagccaaggagaggc 277 |||||||||||||||||||| Sbjct: 127069 ggaaggagccaaggagaggc 127088
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 92463 acctacccacccacccatcc 92444
>emb|AL160251.29| Human DNA sequence from clone RP11-102K13 on chromosome 13 Contains the gene for a novel protein similar to ADP-ribosylarginine hydrolase (ADPRH), the 3' end of the gene for FLJ10704 (FLJ20092), a novel gene and three CpG islands, complete sequence Length = 71203 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 29875 acctacccacccacccatcc 29894
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23 Contains four novel genes, a novel gene (FLJ33962), a novel gene (MGC10731), the 3' end of a novel gene (KIAA1332), a metallothionein family pseudogene and three CpG islands, complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 91727 acctacccacccacccatcc 91746
>emb|AL079339.11|HSJ906P16 Human DNA sequence from clone RP5-906P16 on chromosome 20q13.12-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 86719 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 64627 acctacccacccacccatcc 64608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 64583 acctacccacccacccatcc 64564
>emb|CR392033.5| Zebrafish DNA sequence from clone DKEY-122A22 in linkage group 16, complete sequence Length = 170291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 112160 cctacctacccacccaccca 112141
>gb|AY070387.1| Arabidopsis thaliana At5g58490 mRNA sequence Length = 1176 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 72 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 131 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 132 tactccgtccacgccaccgt 151
>gb|AY285922.1| Fragaria x ananassa cinnamoyl CoA reductase (CCR) mRNA, CCR-1 allele, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ctggaaggagccaaggagaggctg 279 |||||||||||||| ||||||||| Sbjct: 225 ctggaaggagccaaagagaggctg 248
>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence Length = 211081 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 139375 acctacccacccacccatcc 139394
>gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome 16, complete sequence Length = 213324 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 cctacccacccacccatcctctcc 47 ||||||||||||||||||| |||| Sbjct: 66230 cctacccacccacccatccactcc 66253
>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203981 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 105278 acctacccacccacccatcc 105297
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tgccatcgccggctgcgact 343 |||||||||||||||||||| Sbjct: 15838 tgccatcgccggctgcgact 15857
>emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in linkage group 11, complete sequence Length = 202610 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 aacctcatccatggctgctg 496 |||||||||||||||||||| Sbjct: 122601 aacctcatccatggctgctg 122582
>emb|AL589735.12| Mouse DNA sequence from clone RP23-211M15 on chromosome 13 contains the gene for a novel protein similar to human RU2S or KIAA1154, a ribosomal protein L35A (RPL35A) pseudogene and two CpG islands, complete sequence Length = 199957 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cctacctacccacccacccatcct 43 |||||||||||| ||||||||||| Sbjct: 29547 cctacctacccatccacccatcct 29524
>emb|CR377210.7| Zebrafish DNA sequence from clone CH211-195C22 in linkage group 5, complete sequence Length = 170134 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 77565 cctacctacccacccaccca 77584
>gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, complete sequence Length = 184515 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 2559 cctacctacccacccaccca 2578
>gb|AC008556.5| Homo sapiens chromosome 19 clone CTC-526N19, complete sequence Length = 142515 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctacctacccacccacccat 40 |||||||||||||||||||| Sbjct: 64152 ctacctacccacccacccat 64133 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 63224 acctacccacccacccatcc 63205 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 62689 acctacccacccacccatcc 62670
>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete Sequence, complete sequence Length = 223882 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 170907 acctacccacccacccatcc 170926
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 133809 cctacctacccacccaccca 133790
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 23900562 cctacctacccacccaccca 23900543
>gb|AC008998.5| Homo sapiens chromosome 19 clone LLNLR-262C5, complete sequence Length = 47844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 42175 acctacccacccacccatcc 42194
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 68848 acctacccacccacccatcc 68829
>emb|CR601716.1| full-length cDNA clone CS0DF037YE19 of Fetal brain of Homo sapiens (human) Length = 1748 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 1537 cctacctacccacccaccca 1556
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 gagaggctgcacttgttcaaagca 294 |||||||| ||||||||||||||| Sbjct: 92637 gagaggcttcacttgttcaaagca 92660
>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence Length = 200452 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 66991 acctacccacccacccatcc 66972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctacccacccacccatcctc 44 |||||||||||||||||||| Sbjct: 42747 ctacccacccacccatcctc 42728
>gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complete sequence Length = 116507 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 66942 acctacccacccacccatcc 66961
>ref|NM_017530.1| Homo sapiens hypothetical protein LOC55565 (LOC55565), mRNA Length = 1841 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 1520 cctacctacccacccaccca 1539
>emb|BX571666.10| Zebrafish DNA sequence from clone DKEY-221F8 in linkage group 5, complete sequence Length = 115940 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 6701 cctacctacccacccaccca 6720
>gb|AC159818.2| Mus musculus BAC clone RP23-244M3 from chromosome 12, complete sequence Length = 169374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 9980 acctacccacccacccatcc 9999
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence Length = 180258 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 79102 acctacccacccacccatcc 79121
>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence Length = 256298 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 21105 acctacccacccacccatcc 21124 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 21077 acctacccacccacccatcc 21096
>gb|AC009623.6|AC009623 Homo sapiens chromosome 8, clone RP11-219J21, complete sequence Length = 196953 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 173387 cctacctacccacccaccca 173406
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tgccatcgccggctgcgact 343 |||||||||||||||||||| Sbjct: 32120149 tgccatcgccggctgcgact 32120168
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 acccacccatcctctccttc 50 |||||||||||||||||||| Sbjct: 10030277 acccacccatcctctccttc 10030296
>gb|AC079315.30| Homo sapiens 12 BAC RP11-380L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121450 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 100152 acctacccacccacccatcc 100171
>emb|BX829945.1|CNS0A05K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB48ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1291 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 44 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 103 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 104 tactccgtccacgccaccgt 123
>emb|BX832429.1|CNS09ZW0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1184 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 475 gtaacctcatccatggctgctgttgcctacaatgggaagccaagaactcctgatgt 530 |||||||| ||||||||||| |||| |||||||| || ||| | || |||||||| Sbjct: 438 gtaacctcctccatggctgccgttggttacaatggaaaaccacgcacacctgatgt 493
>emb|BX832502.1|CNS09ZKK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1082 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 48 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 107 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 108 tactccgtccacgccaccgt 127
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186215 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tcctacctacccacccacccatcc 42 ||||||| |||||||||||||||| Sbjct: 181844 tcctacccacccacccacccatcc 181821
>gb|AC148019.5| Mus musculus BAC clone RP23-12B6 from chromosome 18, complete sequence Length = 211149 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 41850 cctacctacccacccaccca 41869
>gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS37502 (LLfos-27A6) and 3' overlapping PCR product, complete sequence Length = 41159 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 35485 acctacccacccacccatcc 35504
>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217112 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 161488 acctacccacccacccatcc 161469
>gb|AC117382.10| Homo sapiens 3 BAC RP11-102M11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106509 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 35920 acctacccacccacccatcc 35901
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 108593 acctacccacccacccatcc 108612
>gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, complete sequence Length = 136002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 39005 acctacccacccacccatcc 39024
>gb|AY086975.1| Arabidopsis thaliana clone 30064 mRNA, complete sequence Length = 1150 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 77 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 136 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 137 tactccgtccacgccaccgt 156
>gb|BT002742.1| Arabidopsis thaliana clone C105311 putative cinnamoyl-CoA reductase (At5g58490) mRNA, complete cds Length = 1006 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 133 gtcaccggcgcctcgggctacatcgcctcctggctcgtcaagctcctcctccaccgcggc 192 |||||||||||| |||| ||||| ||| ||||| ||| | | ||||||| ||||||| Sbjct: 31 gtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggc 90 Query: 193 tacactgtccgcgccaccgt 212 ||| | |||| ||||||||| Sbjct: 91 tactccgtccacgccaccgt 110
>gb|AF342981.1| Panicum virgatum Cad2b acetyl-CoA carboxylase (Acc1) gene, partial cds; nuclear gene for plastid product Length = 1820 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctacctacccacccaccca 39 |||||||||||||||||||| Sbjct: 656 cctacctacccacccaccca 675
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acctacccacccacccatcc 42 |||||||||||||||||||| Sbjct: 30848 acctacccacccacccatcc 30829
>gb|AC124005.13| Mus musculus chromosome 3, clone RP24-149B7, complete sequence Length = 166406 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctacctacccacccacccat 40 |||||||||||||||||||| Sbjct: 127506 ctacctacccacccacccat 127487 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,732,873 Number of Sequences: 3902068 Number of extensions: 4732873 Number of successful extensions: 109615 Number of sequences better than 10.0: 296 Number of HSP's better than 10.0 without gapping: 297 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 107798 Number of HSP's gapped (non-prelim): 1782 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
