>CN138_HUMAN (Q9H867) Protein C14orf138|
          Length = 144

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 26/89 (29%), Positives = 38/89 (42%)
 Frame = +2

Query: 197 QDPNSKHLGTTVWDASMVFAKFLEKNSRKGRFCPSKLKGKRAIEXXXXXXXXXXXXXXXX 376
           Q  +S  +G  VWDA++V +K+LE     G    + L  +  +E                
Sbjct: 31  QQYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHA-LSRRSVLELGSGTGAVGLMAATLG 89

Query: 377 XDVVTTDQVEVLPLLMRNVERNKSWIAQS 463
            DVV TD  E+  LL  N+  NK  +  S
Sbjct: 90  ADVVVTDLEELQDLLKMNINMNKHLVTGS 118

>PIM2_MOUSE (Q62070) Serine/threonine-protein kinase Pim-2 (EC 2.7.11.1)|
          Length = 370

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 5   ASATQLDAAL------PPPVLPQTLAAAASTPPERRPGRSSPDSMD-YDRLNSPSTSA-I 160
           A AT L+AA       PP  LP TLA  +   P   P  S+P  +  +  LN  STS+ +
Sbjct: 2   ARATNLNAAPSAGASGPPDSLPSTLAPPSPGSPAALPRASTPCGLSGFSGLNIRSTSSML 61

Query: 161 TLELMGH 181
           T  L GH
Sbjct: 62  TKPLQGH 68

>AMT3_CAEEL (Q21565) Putative ammonium transporter 3|
          Length = 687

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
 Frame = +2

Query: 11  ATQLDAALPPPVLPQTLAAAASTPPERRPGRSSPDSM----DYDRLNSPSTSAITLELMG 178
           +T ++   P   +P  + AAA  PPE RPG S+  ++      ++  S STS  ++ +  
Sbjct: 569 STAIEIEQPIEAVPPEVVAAAVLPPEERPGPSTNSNVSIEASVEKSPSSSTSRRSISIRS 628

Query: 179 H-RLHI-----SQDPNSKHLGTTVWDASMVFAKFLEKNSRKGRF 292
              +H      +  P+S+    +   A+ + +K   KNS  G+F
Sbjct: 629 SPSIHTVSAISTAAPDSR---PSTASATSIISKKSSKNSTVGKF 669

>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = +2

Query: 2    WASAT--QLDAALPPPVLPQTLAAAASTPP---ERRP 97
            WA AT  QL AA P P  P   AAAAST P   E RP
Sbjct: 907  WAYATLEQLPAAAPTPPPPPASAAAASTAPRAAESRP 943

>NFIC_PIG (P21999) Nuclear factor 1 C-type (Nuclear factor 1/C) (NF1-C)|
           (NFI-C) (NF-I/C) (CCAAT-box-binding transcription
           factor) (CTF) (TGGCA-binding protein)
          Length = 506

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/50 (40%), Positives = 25/50 (50%)
 Frame = +2

Query: 29  ALPPPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSPSTSAITLELMG 178
           A PPP LP+ LA   +T P    G SSP S  Y   ++P TS      +G
Sbjct: 443 APPPPGLPR-LALPPATKPTSEGGSSSPTSPSY---STPGTSPANRSFVG 488

>TILS_SYMTH (Q67JG9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 482

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 26/82 (31%), Positives = 33/82 (40%)
 Frame = +2

Query: 2   WASATQLDAALPPPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSPSTSAITLELMGH 181
           W  A   + A+P   L  T+AA    PP   P R   D M  DR   P   A+     G 
Sbjct: 351 WPVAVPGETAIP--ALGVTVAAEL-VPPSAMPARLPDDEMWLDRDRLPGPLAVRTRRPGD 407

Query: 182 RLHISQDPNSKHLGTTVWDASM 247
           RL  +    SK L   + DA +
Sbjct: 408 RLWPAGMQGSKKLQDILVDAKV 429

>FA86A_MOUSE (Q3UZW7) Protein FAM86A|
          Length = 335

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 3/124 (2%)
 Frame = +2

Query: 221 GTTVWDASMVFAKFLEKNSRKGRFCPSKLKGKRAIEXXXXXXXXXXXXXXX---XXDVVT 391
           G   WDA++  A++  +N       P+    +  +E                     + +
Sbjct: 135 GLVTWDAALYLAEWAIEN-------PAAFTDRTILELGSGAGLTGLAICKACCPRAYIFS 187

Query: 392 TDQVEVLPLLMRNVERNKSWIAQSNPDSGSFGSVTVAELDWGNKEHIRAVEPPFDYIIGT 571
               +VL  L  NV  N   +    P       VTVA+LDW      +      D +I  
Sbjct: 188 DCHAQVLEQLRGNVLLNGFSLEPHTPIDAGSSKVTVAQLDWDEVTASQLSAFQADVVIAA 247

Query: 572 DVVY 583
           DV+Y
Sbjct: 248 DVLY 251

>RRF_RHIME (Q92Q52) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 186

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +2

Query: 92  RPGRSSPDSMDYDRLNSPSTSAITLELMGHRLHISQD-----PNSKHLGTTVWDASMVFA 256
           R GR+S + +D           +T+E  G R+ ++Q      P S+ L  +VWD SMV A
Sbjct: 29  RTGRASANVLD----------PVTVEAYGSRMPLNQVANITVPESRMLSVSVWDKSMVGA 78

>PIM1_MOUSE (P06803) Proto-oncogene serine/threonine-protein kinase Pim-1 (EC|
           2.7.11.1)
          Length = 397

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 19/53 (35%), Positives = 21/53 (39%)
 Frame = +2

Query: 29  ALPPPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSPSTSAITLELMGHRL 187
           ALPPP LP      A   P +RP  SS          S S +A      G RL
Sbjct: 8   ALPPPALPDPAGEPARGQPRQRPQSSSDSPSALRASRSQSRNATRSLSPGRRL 60

>CF015_MACMU (Q9BGL9) Protein C6orf15 homolog precursor (rmSTG)|
          Length = 314

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 24/72 (33%), Positives = 32/72 (44%)
 Frame = +2

Query: 5   ASATQLDAALPPPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSPSTSAITLELMGHR 184
           A+A +L  ALP  +   + AAA +      PG SSPD+ D     SP  S          
Sbjct: 122 AAADRLGEALPEELSYLSSAAALAPGSGPLPGESSPDATDL----SPEAS---------- 167

Query: 185 LHISQDPNSKHL 220
            H+ QD  S+ L
Sbjct: 168 -HLHQDSESRRL 178

>XANP_XANS2 (Q60106) Xanthomonalisin precursor (EC 3.4.21.101) (Xanthomonas|
           aspartic proteinase) (Xanthomonapepsin) (Carboxyl
           proteinase) (XCP)
          Length = 827

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
 Frame = +2

Query: 2   WASATQLDAALPPPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSP--STSAITLELM 175
           W S T   AA+ PP   Q LAA++++        ++ ++   +   SP    +A+T    
Sbjct: 27  WVS-THTQAAMSPPASTQVLAASSTS------ATTTGNAYTLNMTGSPRIDGAAVTALEA 79

Query: 176 GHRLHI-------SQDPNSKHLGTTVWDASMVFAKFLEKNSRKGRFCPSK 304
            H LH+       + D     L       S +F KFL  +    RF P++
Sbjct: 80  DHPLHVEVALKLRNPDALQTFLAGVTTPGSALFGKFLTPSQFTERFGPTQ 129

>COBB_STRCO (Q9RJ16) Cobyrinic acid A,C-diamide synthase|
          Length = 486

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 35  PPPVLPQTLAAAASTPPERRPGRSSPDSMD--YDRLNSPSTSAITLELMGH 181
           PPP LP     AA   P  RPGR  P + D    R+   S +A T     H
Sbjct: 255 PPPPLPVPSPGAAPPDPLVRPGRPRPQAPDGLRRRVAMASGAAFTFSYAEH 305

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 20   LDAALPPPVLPQTLAAAASTPPERRPGRSSPD 115
            L A+ P P   +TLA  A+ PP RR    SPD
Sbjct: 1280 LPASTPAPT--ETLATVAAPPPPRRTAAKSPD 1309

>YDEE_SCHPO (Q10447) Hypothetical protein C12B10.14c in chromosome I|
          Length = 665

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +2

Query: 38  PPVLPQTLAAAASTPPERRPGRSSPDSMDYDRLNSPSTSAITLELMGHRLHISQDPNSKH 217
           P  LP  L + A + P   P  ++PD +  +RL+S ++S     L+    +IS  PN+ +
Sbjct: 180 PSSLPTVLNSQALSSP---PVPTTPDEVSTNRLSSSTSSMNCRNLVPDNFNISIRPNTTN 236

Query: 218 LGTTVWDAS 244
             +++ + S
Sbjct: 237 YRSSIQENS 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,218,659
Number of Sequences: 219361
Number of extensions: 1563268
Number of successful extensions: 5336
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5313
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)