ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart39f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468420.1| Oryza sativa (japonica cultivar-group), mRNA 496 e-137
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
3dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4ref|NM_202062.1| Arabidopsis thaliana unknown protein AT1G08125 ... 72 2e-09
5emb|BX817743.1|CNS0ACOH Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
6dbj|AK118816.1| Arabidopsis thaliana At1g08130 mRNA for putative... 72 2e-09
7gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana... 62 2e-06
8emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 48 0.033
9ref|NM_001009799.1| Ovis aries serine (or cysteine) proteinase i... 44 0.52
10ref|NM_173882.1| Bos taurus serine (or cysteine) proteinase inhi... 44 0.52
11gb|BT025459.1| Bos taurus serpin peptidase inhibitor, clade A (a... 44 0.52
12emb|X63129.1|BTA1AT B.taurus mRNA for alpha-1-antitrypsin 44 0.52
13emb|X15555.1|OAPIA1T Sheep mRNA for alpha-1 antitrypsin 44 0.52
14gb|BC102730.1| Bos taurus serine (or cysteine) proteinase inhibi... 44 0.52
15ref|XM_507461.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.0
16ref|XM_464561.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
17ref|XM_506757.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.0
18emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
19gb|AC020894.5| Homo sapiens chromosome 5 clone CTC-293A9, comple... 42 2.0
20dbj|AB017045.1| Paracoccus denitrificans phaZ, phaC, phaP, phaR ... 42 2.0
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
25dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
26dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27dbj|AK121763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
28dbj|AK106217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
29dbj|AK102286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
30dbj|AK061762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
31dbj|AK060395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
32dbj|AB052887.1| Oryza sativa mRNA for 26S proteasome ATPase subu... 42 2.0
33dbj|D43764.1|PDEPHAAC Paracoccus denitrificans phaC gene for pol... 42 2.0
34dbj|AB033537.1| Oryza sativa (japonica cultivar-group) OsRPT6 mR... 42 2.0
35ref|XM_482405.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
36gb|AC107760.9| Mus musculus chromosome 15, clone RP23-189K4, com... 40 8.1
37gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.1
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
39ref|XM_544384.2| PREDICTED: Canis familiaris similar to Zinc fin... 40 8.1
40gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, com... 40 8.1
41gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.1
42emb|X88780.1|SSANTIELA S.scrofa mRNA for alpha-1-antitrypsin 40 8.1
43emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.1
44gb|AC099673.2| Homo sapiens chromosome 1 clone RP11-109H10, comp... 40 8.1
45gb|AE005960.1| Caulobacter crescentus CB15 section 286 of 359 of... 40 8.1
46gb|AC105941.2| Homo sapiens chromosome 1 clone RP11-382E9, compl... 40 8.1
47gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 8.1
48gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 8.1
49gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.1
50dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
52ref|NM_214395.1| Sus scrofa similar to serine (or cysteine) prot... 40 8.1
53gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.1
54dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
55dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.1
56gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cance... 40 8.1
57emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4,... 40 8.1
58emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4,... 40 8.1
59gb|AC154874.9| Mus musculus chromosome 15, clone RP23-227M7, com... 40 8.1
60dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.1 
>ref|XM_468420.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score =  496 bits (250), Expect = e-137
 Identities = 406/458 (88%)
 Strand = Plus / Plus

                                                                       
Query: 135 tgaactccccgagcacgtcggcgatcacgctggagctgatgggccaccgcctgcatattt 194
           ||||||||||||||||||| |||||  |||||||| || ||||||| || ||||| ||||
Sbjct: 62  tgaactccccgagcacgtccgcgatttcgctggagttgctgggccatcggctgcacattt 121

                                                                       
Query: 195 ctcaggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcg 254
           ||||||| |||||||||||||||||||| || ||||| ||||| || || ||||||||||
Sbjct: 122 ctcaggatcctaactcgaagcacctcggaaccacggtctgggatgcatccatggtgttcg 181

                                                                       
Query: 255 ccaagttcctggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaaggga 314
            ||||||| |||||||||||||||| |||||||| |||| ||| |||||||||||||| |
Sbjct: 182 tcaagttcttggaaaagaatagcagaaaaggtagattttctccatctaaactgaaaggaa 241

                                                                       
Query: 315 aaagggcgattgagctaggagctggttgcggtctagccgggctcggaatggcattgctgg 374
           |||||| ||||||||||||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct: 242 aaagggtgattgagctaggagctggttgtggtctagctgggcttggaatggctttgctgg 301

                                                                       
Query: 375 gttgtgacgtcgttacgaccgaccaggttgaggtgctcccgctgctcatgaggaatgttg 434
           |||||||||| ||||| || ||||| ||||||||||||||||||||  ||||||||||||
Sbjct: 302 gttgtgacgtggttacaacagaccaagttgaggtgctcccgctgcttttgaggaatgttg 361

                                                                       
Query: 435 aacgcaacaaatcgtggatcgcgcagtctaatcctgactcaggctcctttggctcagtta 494
           ||||||||||||| |||||  | ||||| ||  |||||||||||||| | ||||| || |
Sbjct: 362 aacgcaacaaatcttggatttcacagtcaaactctgactcaggctccatcggctctgtca 421

                                                                       
Query: 495 cggttgcagaattggattggggaaacaaagaacatatcagagccgttgaacctccattcg 554
           | |||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 422 ccgttgcagaattggactggggtaacaaagatcatataagagctgttgatcctccattcg 481

                                                 
Query: 555 attacatcattggaactgatgtcgtttattcagaacat 592
           |||||||||||||||||||||| |||||||||||||||
Sbjct: 482 attacatcattggaactgatgttgtttattcagaacat 519
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  125 bits (63), Expect = 2e-25
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                            
Query: 359      ggaatggcattgctgggttgtgacgtcgttacgaccgaccaggttgaggtgctcccgctg 418
                |||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 35140217 ggaatggctttgctgggttgtgacgtggttacaacagaccaagttgaggtgctcccgctg 35140158

                                                   
Query: 419      ctcatgaggaatgttgaacgcaacaaatcgtggat 453
                ||  ||||||||||||||||||||||||| |||||
Sbjct: 35140157 cttttgaggaatgttgaacgcaacaaatcttggat 35140123



 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                            
Query: 265      ggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaagggaaaagggcgat 324
                ||||||||||||||| |||||||| |||| ||| |||||||||||||| ||||||| |||
Sbjct: 35140394 ggaaaagaatagcagaaaaggtagattttctccatctaaactgaaaggaaaaagggtgat 35140335

                                                 
Query: 325      tgagctaggagctggttgcggtctagccgggct 357
                |||||||||||||||||| |||||||| |||||
Sbjct: 35140334 tgagctaggagctggttgtggtctagctgggct 35140302



 Score =  117 bits (59), Expect = 4e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                            
Query: 474      caggctcctttggctcagttacggttgcagaattggattggggaaacaaagaacatatca 533
                |||||||| | ||||| || || |||||||||||||| ||||| |||||||| ||||| |
Sbjct: 35139858 caggctccatcggctctgtcaccgttgcagaattggactggggtaacaaagatcatataa 35139799

                                                           
Query: 534      gagccgttgaacctccattcgattacatcattggaactgatgt 576
                |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 35139798 gagctgttgatcctccattcgattacatcattggaactgatgt 35139756



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                            
Query: 135      tgaactccccgagcacgtcggcgatcacgctggagctgatgggccaccgcctgcatattt 194
                ||||||||||||||||||| |||||  |||||||| || ||||||| || ||||| ||||
Sbjct: 35140914 tgaactccccgagcacgtccgcgatttcgctggagttgctgggccatcggctgcacattt 35140855

                      
Query: 195      ctcagg 200
                ||||||
Sbjct: 35140854 ctcagg 35140849



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 198      aggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcgcca 257
                |||| |||||||||||||||||||| || ||||| ||||| || || |||||||||| ||
Sbjct: 35140738 aggatcctaactcgaagcacctcggaaccacggtctgggatgcatccatggtgttcgtca 35140679

                     
Query: 258      agttc 262
                |||||
Sbjct: 35140678 agttc 35140674



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 60      tcgccgccgcagcctcgacgccgcc 84
               ||||||||||||||||| |||||||
Sbjct: 5923430 tcgccgccgcagcctcgtcgccgcc 5923454
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score =  125 bits (63), Expect = 2e-25
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                         
Query: 359   ggaatggcattgctgggttgtgacgtcgttacgaccgaccaggttgaggtgctcccgctg 418
             |||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 35573 ggaatggctttgctgggttgtgacgtggttacaacagaccaagttgaggtgctcccgctg 35514

                                                
Query: 419   ctcatgaggaatgttgaacgcaacaaatcgtggat 453
             ||  ||||||||||||||||||||||||| |||||
Sbjct: 35513 cttttgaggaatgttgaacgcaacaaatcttggat 35479



 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                         
Query: 265   ggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaagggaaaagggcgat 324
             ||||||||||||||| |||||||| |||| ||| |||||||||||||| ||||||| |||
Sbjct: 35750 ggaaaagaatagcagaaaaggtagattttctccatctaaactgaaaggaaaaagggtgat 35691

                                              
Query: 325   tgagctaggagctggttgcggtctagccgggct 357
             |||||||||||||||||| |||||||| |||||
Sbjct: 35690 tgagctaggagctggttgtggtctagctgggct 35658



 Score =  117 bits (59), Expect = 4e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                         
Query: 474   caggctcctttggctcagttacggttgcagaattggattggggaaacaaagaacatatca 533
             |||||||| | ||||| || || |||||||||||||| ||||| |||||||| ||||| |
Sbjct: 35214 caggctccatcggctctgtcaccgttgcagaattggactggggtaacaaagatcatataa 35155

                                                        
Query: 534   gagccgttgaacctccattcgattacatcattggaactgatgt 576
             |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 35154 gagctgttgatcctccattcgattacatcattggaactgatgt 35112



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 135   tgaactccccgagcacgtcggcgatcacgctggagctgatgggccaccgcctgcatattt 194
             ||||||||||||||||||| |||||  |||||||| || ||||||| || ||||| ||||
Sbjct: 36270 tgaactccccgagcacgtccgcgatttcgctggagttgctgggccatcggctgcacattt 36211

                   
Query: 195   ctcagg 200
             ||||||
Sbjct: 36210 ctcagg 36205



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 198   aggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcgcca 257
             |||| |||||||||||||||||||| || ||||| ||||| || || |||||||||| ||
Sbjct: 36094 aggatcctaactcgaagcacctcggaaccacggtctgggatgcatccatggtgttcgtca 36035

                  
Query: 258   agttc 262
             |||||
Sbjct: 36034 agttc 36030
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>ref|NM_202062.1| Arabidopsis thaliana unknown protein AT1G08125 mRNA, complete cds
          Length = 1105

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctcaggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcg 254
           ||||||| || || ||||||||  | || ||||| || ||||| ||||| |||||||| |
Sbjct: 127 ctcaggatccaaattcgaagcatttaggaacgaccgtgtgggatgcgtccatggtgtttg 186

                                                                       
Query: 255 ccaagttcctggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaaggga 314
           |||| |  ||||  || ||||||||||| || |||||| || | ||||||||||||||||
Sbjct: 187 ccaaatatctggggaaaaatagcaggaagggaaggtttagttcatctaaactgaaaggga 246

                                       
Query: 315 aaagggcgattgagctaggagctggttg 342
           || | || ||||| |||||||| |||||
Sbjct: 247 aacgtgctattgaactaggagcaggttg 274
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>emb|BX817743.1|CNS0ACOH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL39ZH08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1066

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctcaggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcg 254
           ||||||| || || ||||||||  | || ||||| || ||||| ||||| |||||||| |
Sbjct: 127 ctcaggatccaaattcgaagcatttaggaacgaccgtgtgggatgcgtccatggtgtttg 186

                                                                       
Query: 255 ccaagttcctggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaaggga 314
           |||| |  ||||  || ||||||||||| || |||||| || | ||||||||||||||||
Sbjct: 187 ccaaatatctggggaaaaatagcaggaagggaaggtttagttcatctaaactgaaaggga 246

                                       
Query: 315 aaagggcgattgagctaggagctggttg 342
           || | || ||||| |||||||| |||||
Sbjct: 247 aacgtgctattgaactaggagcaggttg 274
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>dbj|AK118816.1| Arabidopsis thaliana At1g08130 mRNA for putative DNA ligase,
           complete cds, clone: RAFL21-15-C15
          Length = 1180

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctcaggaccctaactcgaagcacctcggcacgacggtatgggacgcgtcgatggtgttcg 254
           ||||||| || || ||||||||  | || ||||| || ||||| ||||| |||||||| |
Sbjct: 182 ctcaggatccaaattcgaagcatttaggaacgaccgtgtgggatgcgtccatggtgtttg 241

                                                                       
Query: 255 ccaagttcctggaaaagaatagcaggaaaggtaggttttgtccgtctaaactgaaaggga 314
           |||| |  ||||  || ||||||||||| || |||||| || | ||||||||||||||||
Sbjct: 242 ccaaatatctggggaaaaatagcaggaagggaaggtttagttcatctaaactgaaaggga 301

                                       
Query: 315 aaagggcgattgagctaggagctggttg 342
           || | || ||||| |||||||| |||||
Sbjct: 302 aacgtgctattgaactaggagcaggttg 329
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>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I,
             complete sequence
          Length = 120965

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 272   aatagcaggaaaggtaggttttgtccgtctaaactgaaagggaaaagggcgattgagcta 331
             ||||||||||| || |||||| || | |||||||||||||||||| | || ||||| |||
Sbjct: 97098 aatagcaggaagggaaggtttagttcatctaaactgaaagggaaacgtgctattgaacta 97039

                        
Query: 332   ggagctggttg 342
             ||||| |||||
Sbjct: 97038 ggagcaggttg 97028
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 88     gcgccggccgggcagaagctcgcc 111
              ||||||||||||||||||||||||
Sbjct: 142384 gcgccggccgggcagaagctcgcc 142407
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>ref|NM_001009799.1| Ovis aries serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1antiproteinase, antitrypsin), member 1
           (SERPINA1), mRNA
          Length = 1334

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tcgccaagttcctggaaaagaa 273
           ||||||||||||||||||||||
Sbjct: 886 tcgccaagttcctggaaaagaa 907
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>ref|NM_173882.1| Bos taurus serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1antiproteinase, antitrypsin), member 1
           (SERPINA1), mRNA
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tcgccaagttcctggaaaagaa 273
           ||||||||||||||||||||||
Sbjct: 913 tcgccaagttcctggaaaagaa 934
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>gb|BT025459.1| Bos taurus serpin peptidase inhibitor, clade A (alpha-1
            antiproteinase, antitrypsin), member 1 (SERPINA1), mRNA,
            complete cds
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 252  tcgccaagttcctggaaaagaa 273
            ||||||||||||||||||||||
Sbjct: 1022 tcgccaagttcctggaaaagaa 1043
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>emb|X63129.1|BTA1AT B.taurus mRNA for alpha-1-antitrypsin
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tcgccaagttcctggaaaagaa 273
           ||||||||||||||||||||||
Sbjct: 913 tcgccaagttcctggaaaagaa 934
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>emb|X15555.1|OAPIA1T Sheep mRNA for alpha-1 antitrypsin
          Length = 1334

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tcgccaagttcctggaaaagaa 273
           ||||||||||||||||||||||
Sbjct: 886 tcgccaagttcctggaaaagaa 907
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>gb|BC102730.1| Bos taurus serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1antiproteinase, antitrypsin), member 1, mRNA
           (cDNA clone MGC:127781 IMAGE:30957372), complete cds
          Length = 1400

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tcgccaagttcctggaaaagaa 273
           ||||||||||||||||||||||
Sbjct: 930 tcgccaagttcctggaaaagaa 951
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>ref|XM_507461.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 126 tcgccgccgcagcctcgtcgccgcc 102
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>ref|XM_464561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 126 tcgccgccgcagcctcgtcgccgcc 102
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>ref|XM_506757.2| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA
          Length = 1771

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 226 tcgccgccgcagcctcgtcgccgcc 202
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>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03,
             complete sequence
          Length = 140948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cccccaaaccctcgccgccgc 69
             |||||||||||||||||||||
Sbjct: 76925 cccccaaaccctcgccgccgc 76905
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>gb|AC020894.5| Homo sapiens chromosome 5 clone CTC-293A9, complete sequence
          Length = 166983

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 359   ggaatggcattgctgggttgt 379
             |||||||||||||||||||||
Sbjct: 68279 ggaatggcattgctgggttgt 68299
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>dbj|AB017045.1| Paracoccus denitrificans phaZ, phaC, phaP, phaR genes for
            intracellular poly(3-hydroxyalkanoate) depolymerase, poly
            (3-hydroxyalkanoate) synthase, granule-associated
            protein, PHA responsive repressor, complete cds
          Length = 6523

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 170  ctgatgggccaccgcctgcat 190
            |||||||||||||||||||||
Sbjct: 3600 ctgatgggccaccgcctgcat 3620
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     cccccaaaccctcgccgccgc 69
              |||||||||||||||||||||
Sbjct: 997206 cccccaaaccctcgccgccgc 997186



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 163      gctggagctgatgggccacc 182
                ||||||||||||||||||||
Sbjct: 17524893 gctggagctgatgggccacc 17524874
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 515      ggaaacaaagaacatatcaga 535
                |||||||||||||||||||||
Sbjct: 23744592 ggaaacaaagaacatatcaga 23744572
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 515    ggaaacaaagaacatatcaga 535
              |||||||||||||||||||||
Sbjct: 122296 ggaaacaaagaacatatcaga 122276
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   ggaaacaaagaacatatcaga 535
             |||||||||||||||||||||
Sbjct: 25177 ggaaacaaagaacatatcaga 25157
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0056C19
          Length = 147739

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 60     tcgccgccgcagcctcgacgccgcc 84
              ||||||||||||||||| |||||||
Sbjct: 101651 tcgccgccgcagcctcgtcgccgcc 101675
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 60     tcgccgccgcagcctcgacgccgcc 84
              ||||||||||||||||| |||||||
Sbjct: 153232 tcgccgccgcagcctcgtcgccgcc 153256
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>dbj|AK121763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090J17,
          full insert sequence
          Length = 470

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 49 cccccaaaccctcgccgccgc 69
          |||||||||||||||||||||
Sbjct: 60 cccccaaaccctcgccgccgc 80
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>dbj|AK106217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H03, full
           insert sequence
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 126 tcgccgccgcagcctcgtcgccgcc 102
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>dbj|AK102286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I16, full
           insert sequence
          Length = 1772

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 226 tcgccgccgcagcctcgtcgccgcc 202
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>dbj|AK061762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B03, full
           insert sequence
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 126 tcgccgccgcagcctcgtcgccgcc 102
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>dbj|AK060395.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B01,
          full insert sequence
          Length = 401

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 49 cccccaaaccctcgccgccgc 69
          |||||||||||||||||||||
Sbjct: 54 cccccaaaccctcgccgccgc 74
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>dbj|AB052887.1| Oryza sativa mRNA for 26S proteasome ATPase subunit Rpt6, complete
           cds
          Length = 1516

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 108 tcgccgccgcagcctcgtcgccgcc 84
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>dbj|D43764.1|PDEPHAAC Paracoccus denitrificans phaC gene for poly (3-hydroxyalkanoate)
            synthase, complete cds
          Length = 2712

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 170  ctgatgggccaccgcctgcat 190
            |||||||||||||||||||||
Sbjct: 2147 ctgatgggccaccgcctgcat 2167
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>dbj|AB033537.1| Oryza sativa (japonica cultivar-group) OsRPT6 mRNA for 26S
           proteasome regulatory particle triple-A ATPase subunit6,
           complete cds
          Length = 1625

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 60  tcgccgccgcagcctcgacgccgcc 84
           ||||||||||||||||| |||||||
Sbjct: 219 tcgccgccgcagcctcgtcgccgcc 195
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>ref|XM_482405.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2073

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 cgatcacgctggagctgatg 175
           ||||||||||||||||||||
Sbjct: 869 cgatcacgctggagctgatg 888
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>gb|AC107760.9| Mus musculus chromosome 15, clone RP23-189K4, complete sequence
          Length = 178900

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   aggctcctttggctcagtta 494
             ||||||||||||||||||||
Sbjct: 97598 aggctcctttggctcagtta 97617
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     cgccgccggagcgccggccg 97
              ||||||||||||||||||||
Sbjct: 823429 cgccgccggagcgccggccg 823448
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 231      tatgggacgcgtcgatggtg 250
                ||||||||||||||||||||
Sbjct: 35923559 tatgggacgcgtcgatggtg 35923540
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>ref|XM_544384.2| PREDICTED: Canis familiaris similar to Zinc finger protein 319
            (LOC487258), mRNA
          Length = 1825

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  gttgaggtgctcccgctgct 420
            ||||||||||||||||||||
Sbjct: 1666 gttgaggtgctcccgctgct 1647
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>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence
          Length = 218109

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  aggctcctttggctcagtta 494
            ||||||||||||||||||||
Sbjct: 2220 aggctcctttggctcagtta 2201
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gccgccggagcgccggccgg 98
               ||||||||||||||||||||
Sbjct: 3843050 gccgccggagcgccggccgg 3843069
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>emb|X88780.1|SSANTIELA S.scrofa mRNA for alpha-1-antitrypsin
          Length = 1351

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cgccaagttcctggaaaaga 272
           ||||||||||||||||||||
Sbjct: 907 cgccaagttcctggaaaaga 926
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      cgccgccggagcgccggccg 97
               ||||||||||||||||||||
Sbjct: 2143657 cgccgccggagcgccggccg 2143676
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>gb|AC099673.2| Homo sapiens chromosome 1 clone RP11-109H10, complete sequence
          Length = 193749

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   tgcagaattggattggggaa 518
             ||||||||||||||||||||
Sbjct: 38985 tgcagaattggattggggaa 38966
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>gb|AE005960.1| Caulobacter crescentus CB15 section 286 of 359 of the complete genome
          Length = 11271

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tcgacgccgccggagcgccg 93
             ||||||||||||||||||||
Sbjct: 10445 tcgacgccgccggagcgccg 10426
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>gb|AC105941.2| Homo sapiens chromosome 1 clone RP11-382E9, complete sequence
          Length = 177743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    tgcagaattggattggggaa 518
              ||||||||||||||||||||
Sbjct: 176272 tgcagaattggattggggaa 176253
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 73      ctcgacgccgccggagcgccggccgggc 100
               |||||||||||||| | |||||||||||
Sbjct: 3031805 ctcgacgccgccggcgtgccggccgggc 3031832
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tatgggacgcgtcgatggtg 250
             ||||||||||||||||||||
Sbjct: 37566 tatgggacgcgtcgatggtg 37585
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      cgccgccggagcgccggccg 97
               ||||||||||||||||||||
Sbjct: 1716924 cgccgccggagcgccggccg 1716943
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 156      cgatcacgctggagctgatg 175
                ||||||||||||||||||||
Sbjct: 19868975 cgatcacgctggagctgatg 19868994
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 231      tatgggacgcgtcgatggtg 250
                ||||||||||||||||||||
Sbjct: 36013689 tatgggacgcgtcgatggtg 36013670
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>ref|NM_214395.1| Sus scrofa similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1antiproteinase, antitrypsin), member 1
           (PI), mRNA
          Length = 1351

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 cgccaagttcctggaaaaga 272
           ||||||||||||||||||||
Sbjct: 907 cgccaagttcctggaaaaga 926
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     cgccggagcgccggccgggc 100
              ||||||||||||||||||||
Sbjct: 110042 cgccggagcgccggccgggc 110061
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>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cgatcacgctggagctgatg 175
             ||||||||||||||||||||
Sbjct: 37153 cgatcacgctggagctgatg 37172
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 160     cacgctggagctgatgggccaccgcctg 187
               ||||||||||| |||||||||| |||||
Sbjct: 5305188 cacgctggagcagatgggccacggcctg 5305215
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>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 185001

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ggaaaagaatagcaggaaag 284
             ||||||||||||||||||||
Sbjct: 39405 ggaaaagaatagcaggaaag 39386
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>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05,
            complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  gctggagctgatgggccacc 182
            ||||||||||||||||||||
Sbjct: 5633 gctggagctgatgggccacc 5614
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>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20,
              complete sequence
          Length = 191218

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gctggagctgatgggccacc 182
              ||||||||||||||||||||
Sbjct: 183659 gctggagctgatgggccacc 183640
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>gb|AC154874.9| Mus musculus chromosome 15, clone RP23-227M7, complete sequence
          Length = 206926

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    aggctcctttggctcagtta 494
              ||||||||||||||||||||
Sbjct: 199830 aggctcctttggctcagtta 199811
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>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete
             sequence
          Length = 175872

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ccgcagcctcgacgccgccg 85
             ||||||||||||||||||||
Sbjct: 87221 ccgcagcctcgacgccgccg 87202


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,109,059
Number of Sequences: 3902068
Number of extensions: 4109059
Number of successful extensions: 85126
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84268
Number of HSP's gapped (non-prelim): 858
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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