ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39e12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor Length = 1255 Score = 971 bits (490), Expect = 0.0 Identities = 520/530 (98%) Strand = Plus / Plus Query: 43 atggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaag 102 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 16 atggcacgggtgctcctcctcgccctggccgccacgctcgccgcgcaggcgtcgtccaag 75 Query: 103 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatcccc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 76 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacacaatcccc 135 Query: 163 ttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 ttccacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 195 Query: 223 gacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctc 282 ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 196 gacggcggccagcggccgccgccggctgagatcacctgcagcagccccacctgcctcctc 255 Query: 283 gccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgac 342 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gccaacgcctaccccgccccgggctgccccgcgcccagctgcggcagcgacaggcacgac 315 Query: 343 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 375 Query: 403 ttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgacc 462 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 376 ttccgcgcgaggctcgtggccaacatcaccgacgggaaccgcccggtgagcgcggtgacc 435 Query: 463 gtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctcc 522 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 436 gtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgcttccccgcggctcc 495 Query: 523 acgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 acgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 545
>dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhibitor TAXI-IV, complete cds Length = 1387 Score = 670 bits (338), Expect = 0.0 Identities = 484/533 (90%), Gaps = 6/533 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 ||||||||||| || ||||||||||||||||||||| ||||||| |||| |||||||||| Sbjct: 49 aagatggcacgagtcctcctcctcgtcctggccgcctcgctcgctgcgctggcgtcgtcc 108 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 109 aaaggtcttccggtgctcgctccggtcaccaaggacaccgctacctccctctacacaatc 168 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 cccttccacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 228 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 229 tgcgacggcggccagccgccggcggag------atcccgtgcagcagccccacctgcctc 282 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctcgccaacgcctaccctgccccgggctgccccgcgcccagctgcggcagcgacaggcac 342 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 343 gacaagccgtgcacggcctacccatacaacccggtcaccggcgcgtgcgccgccgggagc 402 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtg 459 ||||||| | ||| | ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 403 ctcttccacacgaagttcgtggccaacaccaccgacgggaataaaccggtgagcaaggtg 462 Query: 460 accgtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggc 519 | |||||||||| | |||||||||||||||| ||||| || |||||| ||||||| ||| Sbjct: 463 aacgtcggggtcgtggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggc 522 Query: 520 tccacgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 523 tccacgggcgtggccgggctcgcggactccggcctagcgctgccggcgcaggt 575
>emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibitor precursor, exon 1 Length = 1206 Score = 617 bits (311), Expect = e-173 Identities = 475/530 (89%), Gaps = 6/530 (1%) Strand = Plus / Plus Query: 43 atggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaag 102 |||||||| || ||||||||||||||||||||| ||||||| |||| |||||||||||| Sbjct: 1 atggcacgagtcctcctcctcgtcctggccgcctcgctcgctgcgctggcgtcgtccaaa 60 Query: 103 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatcccc 162 | ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| Sbjct: 61 ggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatcccc 120 Query: 163 ttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 180 Query: 223 gacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctc 282 || || | ||||||||| ||| | ||| | |||||||||||||||||||||||| Sbjct: 181 gagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgcctcctc 234 Query: 283 gccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgac 342 ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 235 tccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcacgac 294 Query: 343 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 402 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 295 aagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagcctc 354 Query: 403 ttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgacc 462 |||| | ||| | ||| |||||||||||||||||||| ||||| |||| ||||| | Sbjct: 355 ttccacacgaagttcgcagccaacaccaccgacgggaataaaccggttagcgaggtgaac 414 Query: 463 gtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctcc 522 ||||||||||| |||||||||||||||| ||||| || |||||| ||||||| |||||| Sbjct: 415 gtcggggtcctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggctcc 474 Query: 523 acgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 475 acgggcgtggccgggctcgcgaactccggcctagcgctgccggcgcaggt 524
>emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 603 bits (304), Expect = e-169 Identities = 426/467 (91%), Gaps = 6/467 (1%) Strand = Plus / Plus Query: 106 cttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttc 165 |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| Sbjct: 7 cttccggtgctcgctccggtcaccaaggacaccgctacctccctctacacaatccccttc 66 Query: 166 cacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 225 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 cacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 126 Query: 226 ggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgcc 285 ||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 127 ggcggccagccgccggcggag------atcccgtgcagcagccccacctgcctcctcgcc 180 Query: 286 aacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 345 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aacgcctaccctgccccgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 240 Query: 346 ccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 405 || |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgtgcacggcctacccatacaacccggtcaccggcgcgtgcgccgccgggagcctcttc 300 Query: 406 cgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtc 465 | | ||| | ||||||||||||||||||||||||| ||||||||| ||||| |||| Sbjct: 301 cacacgaagttcgtggccaacaccaccgacgggaataaaccggtgagcaaggtgaacgtc 360 Query: 466 ggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacg 525 |||||| | |||||||||||||||| ||||| || |||||| ||||||| ||||||||| Sbjct: 361 ggggtcgtggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggctccacg 420 Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 421 ggcgtggccgggctcgcggactccggcctagcgctgccggcgcaggt 467
>dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inhibitor, complete cds, upstream region Length = 2322 Score = 599 bits (302), Expect = e-168 Identities = 475/533 (89%), Gaps = 6/533 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 |||||||||||||| |||||||| || ||||||||| |||||| |||| |||||||||| Sbjct: 1074 aagatggcacgggtcctcctcctggtgctggccgcctcgctcgttgcgctggcgtcgtcc 1133 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| Sbjct: 1134 aaaggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatc 1193 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 cccttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacg 1253 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||| || | ||||||||| ||| | ||| | ||||||||||||||||| ||| Sbjct: 1254 tgcgagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgtctc 1307 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 1308 ctctccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcac 1367 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1368 gacaagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagc 1427 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtg 459 ||||||| | ||| | ||| |||||||||||||||||||| ||||| |||| |||| Sbjct: 1428 ctcttccacacgaagttcgcagccaacaccaccgacgggaataaaccggttagcgaggtg 1487 Query: 460 accgtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggc 519 | |||||||||||| |||||||||||||||| ||||| || |||||| ||||||| ||| Sbjct: 1488 aacgtcggggtcctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggc 1547 Query: 520 tccacgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 |||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 1548 tccacgggcgtggccgggctcgcgaactccggcctagcgctgccggcgcaggt 1600
>dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inhibitor TAXI-III, complete cds Length = 1411 Score = 599 bits (302), Expect = e-168 Identities = 475/533 (89%), Gaps = 6/533 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 |||||||||||||| |||||||| || ||||||||| |||||| |||| |||||||||| Sbjct: 77 aagatggcacgggtcctcctcctggtgctggccgcctcgctcgttgcgctggcgtcgtcc 136 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| Sbjct: 137 aaaggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatc 196 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 197 cccttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacg 256 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||| || | ||||||||| ||| | ||| | ||||||||||||||||| ||| Sbjct: 257 tgcgagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgtctc 310 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 311 ctctccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcac 370 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 371 gacaagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagc 430 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtg 459 ||||||| | ||| | ||| |||||||||||||||||||| ||||| |||| |||| Sbjct: 431 ctcttccacacgaagttcgcagccaacaccaccgacgggaataaaccggttagcgaggtg 490 Query: 460 accgtcggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggc 519 | |||||||||||| |||||||||||||||| ||||| || |||||| ||||||| ||| Sbjct: 491 aacgtcggggtcctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggc 550 Query: 520 tccacgggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 |||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 551 tccacgggcgtggccgggctcgcgaactccggcctagcgctgccggcgcaggt 603
>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete cds Length = 1374 Score = 577 bits (291), Expect = e-161 Identities = 466/522 (89%), Gaps = 8/522 (1%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| |||| ||| |||| Sbjct: 68 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccaaagcc-ttcc 126 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 127 ggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccacga 186 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 187 cggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgcgatggcgg 246 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||| Sbjct: 247 ccagccgcccgcggag------atcccgtgcagcagccccacctgcctcctcgccaacgc 300 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||| || || Sbjct: 301 ctaccccgccccgggctgccccgctcccagctgcggcagcgataagcacgacaaaccgtg 360 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||||||||| ||||||||||| ||||||||||||||| |||||||||| || | | Sbjct: 361 cacggcgtacccgtacaacccggtcagcggcgcgtgcgccgcagggagcctctcccacac 420 Query: 411 gaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtcggggt 470 ||| |||||||||||||||||||||||| | ||||||||| ||||| ||||||||| Sbjct: 421 gagattcgtggccaacaccaccgacgggagcaagccggtgagcaaggtgaacgtcggggt 480 Query: 471 ccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgt 530 ||| |||||||||||||||| ||||| || |||||| ||||||| |||||||||||||| Sbjct: 481 cctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggctccacgggcgt 540 Query: 531 ggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 541 ggccgggctcgcgaactccggcttggcgctgccggcgcaggt 582
>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor Length = 1298 Score = 577 bits (291), Expect = e-161 Identities = 466/522 (89%), Gaps = 8/522 (1%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| |||| ||| |||| Sbjct: 60 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccaaagcc-ttcc 118 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 119 ggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccacga 178 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 179 cggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgcgatggcgg 238 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||| Sbjct: 239 ccagccgcccgcggag------atcccgtgcagcagccccacctgcctcctcgccaacgc 292 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||| || || Sbjct: 293 ctaccccgccccgggctgccccgctcccagctgcggcagcgataagcacgacaaaccgtg 352 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||||||||| ||||||||||| ||||||||||||||| |||||||||| || | | Sbjct: 353 cacggcgtacccgtacaacccggtcagcggcgcgtgcgccgcagggagcctctcccacac 412 Query: 411 gaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtcggggt 470 ||| |||||||||||||||||||||||| | ||||||||| ||||| ||||||||| Sbjct: 413 gagattcgtggccaacaccaccgacgggagcaagccggtgagcaaggtgaacgtcggggt 472 Query: 471 ccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgt 530 ||| |||||||||||||||| ||||| || |||||| ||||||| |||||||||||||| Sbjct: 473 cctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccggggctccacgggcgt 532 Query: 531 ggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 533 ggccgggctcgcgaactccggcttggcgctgccggcgcaggt 574
>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 555 bits (280), Expect = e-155 Identities = 420/467 (89%), Gaps = 6/467 (1%) Strand = Plus / Plus Query: 106 cttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttc 165 |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| Sbjct: 7 cttccggtgctcgctccggtcaccaaggacacggccacctccctctacacaatccccttc 66 Query: 166 cacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 225 |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 67 cacgacggagccagcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgcgag 126 Query: 226 ggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgcc 285 ||||||||| ||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 127 ggcggccagtcgccggcggag------atcgcgtgcagcagccccacctgcctcctcgcc 180 Query: 286 aacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 345 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aacgcctaccccgccccgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 240 Query: 346 ccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 405 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 300 Query: 406 cgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtc 465 | | | ||| ||| ||||||||||||||||| || |||||||||| ||||| |||| Sbjct: 301 cacaccaggttcgcagccaacaccaccgacggcaataaaccggtgagcgaggtgaacgtc 360 Query: 466 ggggtccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacg 525 |||| || |||||||||||||||| ||||| || |||||| |||| || ||||||||| Sbjct: 361 cgggtactggcggcgtgcgcgccgagcaagctcctggcgtcgctgccgcggggctccacg 420 Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 421 ggcgtggccgggctcgcgggctccggcctagcgctgccgtcgcaggt 467
>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA sequence Length = 1343 Score = 547 bits (276), Expect = e-152 Identities = 455/515 (88%), Gaps = 6/515 (1%) Strand = Plus / Minus Query: 58 ctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaaggcccttccggtgctc 117 |||||||||||||||||| ||||||| |||| || ||| ||| | | |||||||||||| Sbjct: 1329 ctcctcgtcctggccgcctcgctcgctgcgctggtgtcttccgaaggtcttccggtgctc 1270 Query: 118 gctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacgacggcacc 177 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||| || Sbjct: 1269 gctccggtcaccaaggacacggccacctccctctacacaatccccttccacgacggagcc 1210 Query: 178 aacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcggccagccg 237 | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || Sbjct: 1209 agcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgcgagggcggccagtcg 1150 Query: 238 ccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgcctacccc 297 ||| ||| | ||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 ccggcggag------atcgcgtgcagcagccccacctgcctcctcgccaacgcctacccc 1096 Query: 298 gccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctgcacggcg 357 ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 1095 gccccgggctgccccgcgcccacctgcggcagcgacaggcacgacaagccgtgcacggcg 1036 Query: 358 tacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgcgaggctc 417 ||||| |||||||||||||||||||| |||||||||||||||||||||| | | ||| || Sbjct: 1035 tacccatccaacccggtcaccggcgcatgcgccgccgggagcctcttccacaccaggttc 976 Query: 418 gtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtcggggtccttgcg 477 | ||||||||||||||||| || |||||||||| ||||| |||| |||| || ||| Sbjct: 975 gcagccaacaccaccgacggcaataaaccggtgagcgaggtgaacgtccgggtactggcg 916 Query: 478 gcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgtggccggg 537 ||||||||||||| ||||| || |||||| |||| || |||||||||||||||| |||| Sbjct: 915 gcgtgcgcgccgagcaagctcctggcgtcgctgccgcggggctccacgggcgtgggcggg 856 Query: 538 ctcgcgggctccggcctggcgctgccggcgcaggt 572 |||||||||||||| || ||||||||| ||||||| Sbjct: 855 ctcgcgggctccgggctagcgctgccgtcgcaggt 821
>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor Length = 1245 Score = 490 bits (247), Expect = e-135 Identities = 454/522 (86%), Gaps = 17/522 (3%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| || | ||| | || Sbjct: 18 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccgaagcc-tgcc 76 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 77 ggtgcaagctccggtcaccaaggaccccgccacctccctctacaccatccccttccacga 136 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| | ||| Sbjct: 137 cggcgccagcctcgtcctcgacgccgccggcccgctcgtctggtccacctgcgaggccgg 196 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 |||||||||| ||| | ||| | ||| |||||||||||||||||||||||||||| Sbjct: 197 ccagccgccggcgggg------atcccgtgcggcagccccacctgcctcctcgccaacgc 250 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| |||||||||||||||||| ||||||||||| |||||||||| Sbjct: 251 ctaccccgccccgggctgccccgcgcccacctgcggcagcg---------acaagccctg 301 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| | | Sbjct: 302 cacggcgttcccatccaacccggtcaccggcgcctgcgccgccgggagcctcttccacac 361 Query: 411 gaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggtgaccgtcggggt 470 || |||| ||||||||||||||||||| | |||||||||| ||||| |||||||| Sbjct: 362 cagcttcgtcgccaacaccaccgacgggaccaagccggtgagcgaggtgaaagtcggggt 421 Query: 471 ccttgcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgt 530 ||| |||||||||||||||| ||||| || |||||| |||||||||||||||||||||| Sbjct: 422 cctggcggcgtgcgcgccgagcaagctcctggcgtcgctgccccgcggctccacgggcgt 481 Query: 531 ggccgggctcgcgggctccggcctggcgctgccggcgcaggt 572 ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 482 ggccgggctcgcgaactccggcctcgcgctgccggcgcaggt 523
>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full insert sequence Length = 1520 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 204 ctcgtcctcgacctcgccggcccgctcgtctggtccacgtgc 245
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 177 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 223 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 475 gcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgtggcc 534 |||||||||||||| | || ||| || ||| | |||| |||||| |||||||||| ||| Sbjct: 469 gcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgcc 528 Query: 535 gggctcgcgggctccggcctggcgctgccggcgcaggt 572 || ||||| | ||||||||| ||||| ||||||||||| Sbjct: 529 ggcctcgccgcctccggcctcgcgctcccggcgcaggt 566 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 343 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 402 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 403 acgaggttcatcgccaacaccaccgacgg 431
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 41135587 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 41135541 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 475 gcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgtggcc 534 |||||||||||||| | || ||| || ||| | |||| |||||| |||||||||| ||| Sbjct: 41135295 gcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgcc 41135236 Query: 535 gggctcgcgggctccggcctggcgctgccggcgcaggt 572 || ||||| | ||||||||| ||||| ||||||||||| Sbjct: 41135235 ggcctcgccgcctccggcctcgcgctcccggcgcaggt 41135198 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 41135421 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 41135362 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 41135361 acgaggttcatcgccaacaccaccgacgg 41135333 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 41120013 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 41119971 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 41162100 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 41162141 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 41158840 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 41158881 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 41132817 ctcgtcctcgacctcgccggcgcgctcgtctgg 41132785 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 41168921 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 41168962 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 41162284 acccgttcaacccggtcaccggcgagtgc 41162312 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 34981754 cgtcctcgacgtcgccggcc 34981773
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 32642 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 32596 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 475 gcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgtggcc 534 |||||||||||||| | || ||| || ||| | |||| |||||| |||||||||| ||| Sbjct: 32350 gcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgcc 32291 Query: 535 gggctcgcgggctccggcctggcgctgccggcgcaggt 572 || ||||| | ||||||||| ||||| ||||||||||| Sbjct: 32290 ggcctcgccgcctccggcctcgcgctcccggcgcaggt 32253 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 32476 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 32417 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 32416 acgaggttcatcgccaacaccaccgacgg 32388 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 17068 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 17026 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 59155 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 59196 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 55895 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 55936 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 29872 ctcgtcctcgacctcgccggcgcgctcgtctgg 29840 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 65976 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 66017 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 59339 acccgttcaacccggtcaccggcgagtgc 59367
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full insert sequence Length = 1404 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 189 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 235 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 475 gcggcgtgcgcgccgacgaagctgctcgcgtcgttgccccgcggctccacgggcgtggcc 534 |||||||||||||| | || ||| || ||| | |||| |||||| |||||||||| ||| Sbjct: 481 gcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgcc 540 Query: 535 gggctcgcgggctccggcctggcgctgccggcgcaggt 572 || ||||| | ||||||||| ||||| ||||||||||| Sbjct: 541 ggcctcgccgcctccggcctcgcgctcccggcgcaggt 578 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 355 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 414 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 415 acgaggttcatcgccaacaccaccgacgg 443
>ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 171 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 213
>ref|NM_190076.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 178 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 219 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 362 acccgttcaacccggtcaccggcgagtgc 390
>ref|NM_190075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 175 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 216
>dbj|AK108977.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E08, full insert sequence Length = 1601 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 247 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 288
>dbj|AK064091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-D09, full insert sequence Length = 1478 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 217 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 258 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 401 acccgttcaacccggtcaccggcgagtgc 429
>ref|XM_476216.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 375 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgc 562 |||||||| ||||||||| ||||||||||||||||| Sbjct: 160 ggcgtggcacggctcgcggactccggcctggcgctgc 196
>ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 172 ctcgtcctcgacctcgccggcgcgctcgtctgg 204
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgc 562 |||||||| ||||||||| ||||||||||||||||| Sbjct: 14603 ggcgtggcacggctcgcggactccggcctggcgctgc 14639
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgc 562 |||||||| ||||||||| ||||||||||||||||| Sbjct: 7737017 ggcgtggcacggctcgcggactccggcctggcgctgc 7737053 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 27288468 cccgcgcccagctgcggcag 27288449
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 526 ggcgtggccgggctcgcgggctccggcctggcgctgc 562 |||||||| ||||||||| ||||||||||||||||| Sbjct: 47525 ggcgtggcacggctcgcggactccggcctggcgctgc 47561
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 gtcaccaaggacgccgccacctccctctaca 154 |||||||||||||| ||||||||||||||| Sbjct: 164 gtcaccaaggacgcgtccacctccctctaca 194
>ref|NM_190078.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 172 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 213
>gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 404 of 460 of the complete genome Length = 12103 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 ctggccgccacgctcgccgcgcaggc 92 ||||||||||||||| |||||||||| Sbjct: 8310 ctggccgccacgctcaccgcgcaggc 8335
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 ctggccgccacgctcgccgcgcaggc 92 ||||||||||||||| |||||||||| Sbjct: 4523744 ctggccgccacgctcaccgcgcaggc 4523769
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full insert sequence Length = 1372 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| ||||||||||||| ||||||| |||||| Sbjct: 198 ctcgtcgtcgacctcgccggcccgctgctctggtcgacgtgc 239
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 tgcggcagcgacaggcacgac 342 ||||||||||||||||||||| Sbjct: 3436747 tgcggcagcgacaggcacgac 3436727
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccg 379 ||||||||||||||||||||| Sbjct: 92566 acccgtccaacccggtcaccg 92586
>emb|AL355500.20| Human DNA sequence from clone RP11-540N6 on chromosome 10 Contains a novel gene, complete sequence Length = 114694 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 agcagccccacctgcctcctc 282 ||||||||||||||||||||| Sbjct: 101609 agcagccccacctgcctcctc 101589
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 542 cgggctccggcctggcgctgccggc 566 |||||||||||||| |||||||||| Sbjct: 886456 cgggctccggcctgacgctgccggc 886432
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 476 cggcgtgcgcgccgacgaagctgctcgcg 504 |||| |||||||||||||||||| ||||| Sbjct: 2047199 cggcatgcgcgccgacgaagctgttcgcg 2047227
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 ctccggcctggcgctgccggc 566 ||||||||||||||||||||| Sbjct: 328871 ctccggcctggcgctgccggc 328891
>gb|AC048337.28| Homo sapiens 12 BAC RP11-711D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107515 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cctccctctacaaaatcccct 163 ||||||||||||||||||||| Sbjct: 72368 cctccctctacaaaatcccct 72348
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 cacgctcgccgcgcaggcgtcgtcc 99 ||||||| ||||||||||||||||| Sbjct: 406648 cacgctcaccgcgcaggcgtcgtcc 406672
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 acccggtcaccggcgcgtgcg 388 ||||||||||||||||||||| Sbjct: 96007 acccggtcaccggcgcgtgcg 95987
>gb|AF053745.1|AF053745 Mus dunni endogenous virus complete genome Length = 8655 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cacctgcagcagccccacctg 275 ||||||||||||||||||||| Sbjct: 1170 cacctgcagcagccccacctg 1190
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gcgacggcggccagccgccgccgg 244 |||||||||||||||||| ||||| Sbjct: 403229 gcgacggcggccagccgctgccgg 403252
>ref|XM_472429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2634 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 1319 acaccaccgatgggaaccgcccgg 1342
>ref|NM_197079.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.21), mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 704 agccgccgccggcggctgac 723
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ggccgccacgctcgccgcgc 88 |||||||||||||||||||| Sbjct: 2839799 ggccgccacgctcgccgcgc 2839818
>ref|NM_190344.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1203 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 383 cgtcctcgacgtcgccggcc 402
>gb|BT017726.1| Zea mays clone EL01N0447F12.c mRNA sequence Length = 601 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ggccgccacgctcgccgcgcaggc 92 |||||||| ||||||||||||||| Sbjct: 471 ggccgccaagctcgccgcgcaggc 448
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggccggg 537 ||||||||||||||| |||||||| Sbjct: 1145150 cgcggctccacgggcttggccggg 1145173
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 163436 cccgcgcccagctgcggcag 163417
>ref|XM_584949.2| PREDICTED: Bos taurus similar to alpha-N-acetylglucosaminidase precursor (LOC539117), mRNA Length = 2451 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 cggctccacgggcgtggccg 535 |||||||||||||||||||| Sbjct: 234 cggctccacgggcgtggccg 253
>ref|XM_593633.2| PREDICTED: Bos taurus similar to Heat shock 70 kDa protein 12B (LOC515590), mRNA Length = 2875 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgcagcagccccacctgcct 278 |||||||||||||||||||| Sbjct: 2822 tgcagcagccccacctgcct 2841
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 925 cccgcgcccagctgcggcag 906
>gb|BC055733.1| Mus musculus alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), mRNA (cDNA clone MGC:66992 IMAGE:6411530), complete cds Length = 2478 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 231 cgcggctccacgggcgtggc 250
>ref|NM_013792.1| Mus musculus alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) (Naglu), mRNA Length = 2452 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 226 cgcggctccacgggcgtggc 245
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 geldanamycin biosynthesis gene cluster, partial sequence Length = 75920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 17998 cggcggccagccgccgccgg 17979
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 4523114 ctcctcctcctcctggccgccaccgtcgccgc 4523145
>ref|XM_845198.1| PREDICTED: Canis familiaris similar to Platelet glycoprotein Ib beta chain precursor (GP-Ib beta) (GPIbB) (GPIb-beta) (LOC608234), mRNA Length = 618 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gccgcgggctgccccgcgcc 317 |||||||||||||||||||| Sbjct: 76 gccgcgggctgccccgcgcc 95
>ref|XM_861107.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 8 (LOC479916), mRNA Length = 8826 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861094.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 7 (LOC479916), mRNA Length = 8985 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861079.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 6 (LOC479916), mRNA Length = 9000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861068.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 5 (LOC479916), mRNA Length = 9036 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861056.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 4 (LOC479916), mRNA Length = 8844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5268 gcagccccacctgcctcctc 5287
>ref|XM_861040.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 3 (LOC479916), mRNA Length = 8628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5052 gcagccccacctgcctcctc 5071
>ref|XM_537042.2| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 1 (LOC479916), mRNA Length = 10534 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5807 gcagccccacctgcctcctc 5826
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 30638 cggcggccagccgccgccgg 30619
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gcggcgtgcgcgccgacgaa 494 |||||||||||||||||||| Sbjct: 4215164 gcggcgtgcgcgccgacgaa 4215145
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cctggcgctgccggcgcagg 571 |||||||||||||||||||| Sbjct: 27898 cctggcgctgccggcgcagg 27917
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cctggcgctgccggcgcagg 571 |||||||||||||||||||| Sbjct: 163696 cctggcgctgccggcgcagg 163715
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cctggcgctgccggcgcagg 571 |||||||||||||||||||| Sbjct: 118962 cctggcgctgccggcgcagg 118943
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cggccagccgccgccggcgg 247 |||||||||||||||||||| Sbjct: 114956 cggccagccgccgccggcgg 114975
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ccgcgcccagctgcggcagc 330 |||||||||||||||||||| Sbjct: 296990 ccgcgcccagctgcggcagc 297009
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 12938 acaccaccgatgggaaccgcccgg 12961
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 89232 acaccaccgatgggaaccgcccgg 89255
>gb|DQ023265.1| Hylobates klossii HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 46648 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 5987 cgcggctccacgggcgtggc 6006
>gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 40709 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 21819 cgcggctccacgggcgtggc 21838
>gb|AF363242.1| Mus musculus N-acetyl-glucosaminidase (Naglu) and 17-beta-hydroxysteroid dehydrogenase (Hsd17b1) genes, complete cds Length = 10938 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 431 cgcggctccacgggcgtggc 450
>dbj|D14281.1|STMPSN22 Streptomyces flavovirens plasmid pSN22 DNA, complete sequence Length = 10992 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcctcctcgtcctggccgcc 75 |||||||||||||||||||| Sbjct: 7000 tcctcctcgtcctggccgcc 7019
>dbj|AK143546.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970027J08 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 2460 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 258 cgcggctccacgggcgtggc 277
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 64791 agccgccgccggcggctgac 64810
>dbj|AK158045.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930021C23 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 4205 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 239 cgcggctccacgggcgtggc 258
>dbj|AK158774.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430306J22 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 3081 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 475 cgcggctccacgggcgtggc 494
>ref|NM_000263.3| Homo sapiens N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB) (NAGLU), mRNA Length = 2798 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 572 cgcggctccacgggcgtggc 591
>dbj|AK164125.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530038H07 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 2442 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 236 cgcggctccacgggcgtggc 255
>dbj|AK170758.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630118J17 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 2365 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 240 cgcggctccacgggcgtggc 259
>dbj|AK044668.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031D14 product:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB), full insert sequence Length = 2970 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 189 cgcggctccacgggcgtggc 208
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 gcgtggccgggctcgcgggc 546 |||||||||||||||||||| Sbjct: 22992 gcgtggccgggctcgcgggc 22973
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 20578604 acaccaccgatgggaaccgcccgg 20578627
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 17867250 agccgccgccggcggctgac 17867231
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 4523229 ctcctcctcctcctggccgccaccgtcgccgc 4523260
>gb|AC069014.21|AC069014 Mus musculus 11 BAC RP23-278K23 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 181557 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 134423 cgcggctccacgggcgtggc 134442
>gb|AY860818.1| Chlamydomonas reinhardtii putative chloroplast lycopene beta cyclase precursor (LCYB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3272 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cagctgcggcagcgacaggc 337 |||||||||||||||||||| Sbjct: 1586 cagctgcggcagcgacaggc 1567
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 128406 ctcctcctcctcctggccgccaccgtcgccgc 128437
>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 259735 cagcagccccacctgcctcc 259754
>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence Length = 179146 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 141524 cgcggctccacgggcgtggc 141505
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis gene cluster, partial sequence Length = 69644 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 10214 cggcggccagccgccgccgg 10195
>gb|AF294393.1|AF294393 Rattus norvegicus glycerol-3-phosphate dehydrogenase gene, promoters A and B and exons 1a and 1b; nuclear gene for mitochondrial product Length = 13425 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ctccctctacaaaatccccttcca 167 |||||||||||||| ||||||||| Sbjct: 12351 ctccctctacaaaagccccttcca 12328
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgccacgctcgccgcgcagg 91 |||||||||||||||||||| Sbjct: 4971672 cgccacgctcgccgcgcagg 4971653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cgccgcgcaggcgtcgtcca 100 |||||||||||||||||||| Sbjct: 3937335 cgccgcgcaggcgtcgtcca 3937316 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 cctcgtcctggccgccacgctcgccgcg 87 ||||| |||||||||| ||||||||||| Sbjct: 3521122 cctcgccctggccgccgcgctcgccgcg 3521095
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 25982 cgtcctcgacgtcgccggcc 26001
>dbj|AB122090.1| Oryza sativa (japonica cultivar-group) Radc1 gene for Radc1, complete cds Length = 3000 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 1286 ctcctcctcctcctggccgccaccgtcgccgc 1317
>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete sequences Length = 165662 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 18194 cagcagccccacctgcctcc 18213
>emb|Y17270.1|SVI17270 Streptomyces viridochromogenes acnA and murA (partial) genes Length = 4020 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cccgtccaacccggtcaccg 379 |||||||||||||||||||| Sbjct: 2512 cccgtccaacccggtcaccg 2531
>dbj|AK120050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A21, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 81 ctcctcctcctcctggccgccaccgtcgccgc 112
>dbj|AK109870.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A10, full insert sequence Length = 2048 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 515 acaccaccgatgggaaccgcccgg 538
>dbj|AK102095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083E22, full insert sequence Length = 2403 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 361 cccgcgcccagctgcggcag 380
>gb|AF003255.1|AF003255 Mus musculus alpha-N-acetylglucosaminidase gene, complete cds Length = 7721 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 431 cgcggctccacgggcgtggc 450
>gb|BC053991.1| Homo sapiens N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB), mRNA (cDNA clone MGC:59849 IMAGE:6213852), complete cds Length = 2502 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 255 cgcggctccacgggcgtggc 274
>dbj|AK062232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D08, full insert sequence Length = 1742 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 92 ctcctcctcctcctggccgccaccgtcgccgc 123
>gb|AY103667.1| Zea mays PCO151039 mRNA sequence Length = 771 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ggccgccacgctcgccgcgcaggc 92 |||||||| ||||||||||||||| Sbjct: 140 ggccgccaagctcgccgcgcaggc 163
>gb|U34879.1|HSU34879 Human 17-beta-hydroxysteroid dehydrogenase (EDH17B2) gene, complete cds Length = 46610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 11181 cgcggctccacgggcgtggc 11200
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ccggcgcgtgcgccgccggg 396 |||||||||||||||||||| Sbjct: 82977 ccggcgcgtgcgccgccggg 82958
>gb|U80909.1|PVU80909 Pseudorabies virus DNA-binding protein (DBP) gene, complete cds Length = 3957 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gcgtggccgggctcgcgggc 546 |||||||||||||||||||| Sbjct: 2677 gcgtggccgggctcgcgggc 2696
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 cggcctggcgctgccggcgc 568 |||||||||||||||||||| Sbjct: 2962248 cggcctggcgctgccggcgc 2962229
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cctggcgctgccggcgcagg 571 |||||||||||||||||||| Sbjct: 2413107 cctggcgctgccggcgcagg 2413126
>gb|U43573.1|HSU43573 Human alpha-N-acetylglucosaminidase (NAGLU) mRNA, complete cds Length = 2458 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 232 cgcggctccacgggcgtggc 251
>gb|U43572.1|HSU43572 Human alpha-N-acetylglucosaminidase (NAGLU) gene, complete cds Length = 10127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 1648 cgcggctccacgggcgtggc 1667
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 17876503 agccgccgccggcggctgac 17876484
>emb|BX255926.10| Mouse DNA sequence from clone RP23-440M18 on chromosome 11, complete sequence Length = 73844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 3022 cgcggctccacgggcgtggc 3041
>gb|U85247.1|MMU85247 Mus musculus lysosomal alpha-N-acetylglucosaminidase Naglu mRNA, complete cds Length = 2452 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 226 cgcggctccacgggcgtggc 245
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 530 tggccgggctcgcgggctccggcctggcgctgccgg 565 ||||| ||| ||||||| ||||||||||| |||||| Sbjct: 229174 tggcccggcacgcgggcgccggcctggcggtgccgg 229209
>gb|L78464.1|HUMUFHS Human alpha-N-acetylglucosaminidase (ufHSD1) mRNA, complete cds Length = 2446 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 238 cgcggctccacgggcgtggc 257
>gb|U40846.1|HSU40846 Human alpha-N-acetylglucosaminidase (NAG) mRNA, complete cds Length = 2575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cgcggctccacgggcgtggc 533 |||||||||||||||||||| Sbjct: 333 cgcggctccacgggcgtggc 352
>dbj|AP000688.1| Homo sapiens genomic DNA, chromosome 21q22.2, PAC clone:P27A22, CBR1-HLCS region Length = 171703 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 74921 cagcagccccacctgcctcc 74940
>dbj|AB003151.1| Homo sapiens DNA, chromosome 21q22.2, PAC clone 25P16 complete sequence, encoding carbonyl reductase and carbonyl reductase 3 (complete cds) Length = 170529 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 9743 cagcagccccacctgcctcc 9762 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,817,806 Number of Sequences: 3902068 Number of extensions: 3817806 Number of successful extensions: 98722 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94565 Number of HSP's gapped (non-prelim): 4139 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
