ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart39e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 184 1e-46
2EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 169 7e-42
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 52 1e-06
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 46 7e-05
5PCHA_PSEAE (Q51508) Salicylate biosynthesis isochorismate syntha... 33 0.62
6SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 33 0.81
7F13B_HUMAN (P05160) Coagulation factor XIII B chain precursor (P... 33 0.81
8OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 32 1.8
9GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge... 31 2.3
10COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor 31 2.3
11Y200_ANASP (Q8Z098) UPF0272 protein All0200 31 2.3
12FCA_ARATH (O04425) Flowering time control protein FCA 31 2.3
13GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase p... 31 3.1
14CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alph... 31 3.1
15PURQ_CORGL (Q8NMI4) Phosphoribosylformylglycinamidine synthase I... 31 3.1
16CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel al... 31 3.1
17CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel al... 31 3.1
18BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein) 30 4.0
19NR2F1_BRARE (Q06725) Nuclear receptor Nr2f1 (Steroid receptor ho... 30 4.0
20CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor 30 5.2
21FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear fa... 30 5.2
22EMAP_STRPU (Q26613) 77 kDa echinoderm microtubule-associated pro... 30 5.2
23CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al... 30 5.2
24WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei... 30 6.8
25HDAC6_HUMAN (Q9UBN7) Histone deacetylase 6 (HD6) 30 6.8
26BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot... 30 6.8
27CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor 30 6.8
28COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor 29 8.9
29ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disinteg... 29 8.9
30WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei... 29 8.9
31CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor 29 8.9
32CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta... 29 8.9
33MRAW_BUCAI (P57319) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 29 8.9
34ZN553_HUMAN (Q96MX3) Zinc finger protein 553 29 8.9
35CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor 29 8.9

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score =  184 bits (468), Expect = 1e-46
 Identities = 95/156 (60%), Positives = 114/156 (73%)
 Frame = +3

Query: 123 CGFPAIFNFGDSSSDTGAFPALFPAVQPPYGQTFFGMPAGRQSDGRLVIDFMAQNLGLRY 302
           C FPAIFNFGDS+SDTG   A F    PP+G +FFG PAGR  DGRLVIDF+A++LGL Y
Sbjct: 26  CHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPY 85

Query: 303 LNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQLWQFQQFINRSRFVY 482
           L+A+LDS+GSNF+ GANFA+A   IR +N +L  SG+SP SLDVQ  QF  F NRS+ V 
Sbjct: 86  LSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVR 145

Query: 483 NNIGGVYREILPNPEHLVSKALYTFKIGANDLAMGY 590
           +  GGVY+ +LP  +   SKALYTF IG NDL  GY
Sbjct: 146 SR-GGVYKTMLPESDSF-SKALYTFDIGQNDLTAGY 179



to top

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score =  169 bits (427), Expect = 7e-42
 Identities = 91/179 (50%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
 Frame = +3

Query: 57  NKLITFVVLLVVLEMVRSEDSPCGFPAIFNFGDSSSDTGAFPALFPAVQPPYGQTFFGMP 236
           N +IT   LL +L +  + ++ C FPAIFNFGDS+SDTG   A F  + PPYG+TFF   
Sbjct: 9   NPIITLSFLLCMLSLAYASET-CDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRS 67

Query: 237 AGRQSDGRLVIDFMAQNLGLRYLNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWT-SGY 413
            GR SDGRL+IDF+A++  L YL+ YL SLGSNF  GA+FA+A  TI+     +    G+
Sbjct: 68  TGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGF 127

Query: 414 SPISLDVQLWQFQQFINRSRFVYNNIGGVYREILPNPEHLVSKALYTFKIGANDLAMGY 590
           SP  LDVQ  QF+QFI RS+F+    GG++ E++P  E+   KALYTF IG NDL  G+
Sbjct: 128 SPFYLDVQYSQFRQFIPRSQFI-RETGGIFAELVPE-EYYFEKALYTFDIGQNDLTEGF 184



to top

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
 Frame = +3

Query: 132 PAIFNFGDSSSDTGAFPALFPAVQP---PYGQTF-FGMPAGRQSDGRLVIDFMAQNLGLR 299
           PA+F FGDS  DTG    L   ++    PYG  F F +  GR S+G +  D++A+ +G++
Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262

Query: 300 -YLNAYLDS--LGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDV--------QLWQ 446
             + AYLD     ++   G +FAS              +GY+P + +         QL  
Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGG------------AGYNPTTSEAANAIPMLDQLTY 310

Query: 447 FQQFINR-SRFVYNNIGGVYREILPNPEHLVSKALYTFKIGANDLAMGY 590
           FQ +I + +R V           L     L+SK +     G+NDL + Y
Sbjct: 311 FQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITY 359



to top

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
 Frame = +3

Query: 132 PAIFNFGDSSSDTGAFPALFPAVQ---PPYGQTF-FGMPAGRQSDGRLVIDFMAQNLGLR 299
           PA+F FGDS  DTG    L   ++    PYG  F  G+  GR S+GR+  D++++ LG++
Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183

Query: 300 -YLNAYLDS--------LGSNFTQGANFAS-AAGTIRRVNGSLWTSGYSPISLDVQLWQF 449
             + AY+D           S+   G +FAS  AG + + + S     +   ++  QL  F
Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSES-----WKVTTMLDQLTYF 238

Query: 450 QQFINRSRFVYNNIGGVYREILPNPEHLVSKALYTFKIGANDLAMGY 590
           Q +  R + +               + +VSK       G+NDL   Y
Sbjct: 239 QDYKKRMKKLVGK---------KKTKKIVSKGAAIVVAGSNDLIYTY 276



to top

>PCHA_PSEAE (Q51508) Salicylate biosynthesis isochorismate synthase (EC|
           5.4.4.2) (Isochorismate mutase)
          Length = 476

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 21/49 (42%), Positives = 23/49 (46%)
 Frame = +2

Query: 425 PGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGALHLQNRRQ 571
           PG  ALA+ A H    LRL+Q  R  P  P      G QG    Q RRQ
Sbjct: 158 PGEDALALAAYHCSALLRLRQPARRRPSGP----TAGAQGDASAQERRQ 202



to top

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
            receptor expressed by endothelial cells 2 protein)
            (SREC-II) (SRECRP-1)
          Length = 866

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +2

Query: 215  PDLLRHAGRAAERRPPRHRLHGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGERE 394
            P L   A   A   PPR R  G  PG   P    G  R    A S               
Sbjct: 724  PGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASML------------- 770

Query: 395  PVDLRVQPHFPGRAALAIPAVHQQE-PLRLQQHRRSLPGDPAEP-RAP 532
              +LR +    GRA +A+ A   +E P   Q+ +RS+P  PA P RAP
Sbjct: 771  AAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVP--PASPARAP 816



to top

>F13B_HUMAN (P05160) Coagulation factor XIII B chain precursor|
           (Protein-glutamine gamma-glutamyltransferase B chain)
           (Transglutaminase B chain) (Fibrin-stabilizing factor B
           subunit)
          Length = 661

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +3

Query: 60  KLITFVVLLVVLEMVRSEDSPCGFPAIFN 146
           K +TF+++L++   + +E+ PCGFP + N
Sbjct: 4   KNLTFIIILIISGELYAEEKPCGFPHVEN 32



to top

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 29/104 (27%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
 Frame = +2

Query: 257  PPRHRLHGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQ--PHFPG 430
            PP+   HG  P   LP+  PG   +  +A      +    Q G+  P  +  Q  P  PG
Sbjct: 1656 PPQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVGQQVGQGPPGGMMSQKPPPMPG 1715

Query: 431  RAALAIPAVHQQEPLRLQQHRRSLPGD------PAEPRAPGLQG 544
            +A    P + QQ P     H    P        P    APG  G
Sbjct: 1716 QAMQQQP-LQQQPPSHQHPHPHQHPQHQHPHQMPPNQTAPGGYG 1758



to top

>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 29/70 (41%), Positives = 32/70 (45%)
 Frame = +2

Query: 380 TGEREPVDLRVQPHFPGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGALHLQ 559
           TGE  PV L VQP     A  A PAV    PL LQQ +   P     P+AP  Q A   Q
Sbjct: 561 TGEAAPV-LTVQP-----APQAPPAVSTPLPLGLQQPQAQQP-----PQAPTPQAAAPPQ 609

Query: 560 NRRQRPRHGL 589
               +P  GL
Sbjct: 610 ATTPQPSPGL 619



to top

>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
 Frame = +2

Query: 359 ERRRNHQTGEREPVDL------RVQPHFPGRAALAIPAVHQQEPLRLQQHRRSLPGDPAE 520
           ER  N + GE  PV L      +  P  PG A L++      +     Q  R  PG+  E
Sbjct: 112 ERGLNGEKGEAGPVGLPGARGPQGPPGIPGPAGLSVLGKPGPQGPPGAQGPRGPPGEKGE 171

Query: 521 PRAPGLQG 544
           P  PG+ G
Sbjct: 172 PGVPGING 179



to top

>Y200_ANASP (Q8Z098) UPF0272 protein All0200|
          Length = 426

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +3

Query: 264 VIDFMAQNLGLRYLNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQLW 443
           ++D +   LGL +L    D+ G      + F +  GT+R  +G +      P+   ++LW
Sbjct: 136 IVDIVGTCLGLDWLGIASDNAGFPLLYCSAFPTGGGTVRAAHGQMAV----PVPAVLKLW 191

Query: 444 QFQQFINRSRFVYNNIGGVYREIL 515
           +      R   VY+N  G+ RE++
Sbjct: 192 EM-----RGCPVYSN--GIDRELV 208



to top

>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +2

Query: 287 PGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQPHFPGRAALAIPAVHQQ 466
           PGA  P   P     QL       ++  +  T  + P+++ ++P     A +  P   QQ
Sbjct: 435 PGAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ 494

Query: 467 EPLRLQQH 490
           +PL+  QH
Sbjct: 495 QPLQKMQH 502



to top

>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC|
           2.3.1.43) (Glycerophospholipid-cholesterol
           acyltransferase) (GCAT)
          Length = 335

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
 Frame = +3

Query: 72  FVVLLVVLEM-VRSEDSPCGFPAIFNFGDSSSDTGAFPAL---FPAVQPPYGQTFFGMPA 239
           FV LL ++ + V++ DS   F  I  FGDS SDTG   +    +    PPY +       
Sbjct: 5   FVCLLGLVALTVQAADSRPAFSRIVMFGDSLSDTGKMYSKMRGYLPSSPPYYE------- 57

Query: 240 GRQSDGRLVIDFMAQNLGLRYLNAYLDSLGSNF--TQGANFASAAGTIRRVNGSLWTSGY 413
           GR S+G +                +L+ L + F     AN A    T    N   W   Y
Sbjct: 58  GRFSNGPV----------------WLEQLTNEFPGLTIANEAEGGPTAVAYNKISWNPKY 101

Query: 414 SPI-SLDVQLWQFQQ 455
             I +LD ++ QF Q
Sbjct: 102 QVINNLDYEVTQFLQ 116



to top

>CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2359

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -2

Query: 134 REAARGIFGAHHF*YHQQHHERDEFVGGHGG 42
           R A R     HH  YH  HH    +   HGG
Sbjct: 506 RRAGRRTASVHHLVYHHHHHHHHHYHFSHGG 536



to top

>PURQ_CORGL (Q8NMI4) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)|
           (FGAM synthase I)
          Length = 223

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
 Frame = +3

Query: 132 PAIFNFGDSSSDTGAFPALFPAVQPPYGQTFFGMPA-----GRQ--SDGRLVIDFMAQNL 290
           P  F++GD    TGA  AL P +Q    Q   GMP      G Q  ++ RL+   + +N 
Sbjct: 49  PGGFSYGDYLR-TGAISALAPVMQSVIEQAGKGMPVLGICNGFQILTEARLLPGALTRNK 107

Query: 291 GLRY--LNAYLDSLGSNFTQGANFASAAGTI----RRVNGSLWTSGYSPISLDVQLWQFQ 452
           GL +  ++A+L  + +N T   N       I    +   G       +   L+ +     
Sbjct: 108 GLHFHCVDAHL-VVENNTTAWTNTLEKGQQILIPAKHGEGRFQADAETIAQLEGEGRVVF 166

Query: 453 QFINRSRFVYNNIGGVYRE------ILPNPEHLVSK 542
           ++ +      N+I G+  E      ++P+PEH V K
Sbjct: 167 RYTDNFNGSVNDIAGITNETGRIVGLMPHPEHAVEK 202



to top

>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2365

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -2

Query: 134 REAARGIFGAHHF*YHQQHHERDEFVGGHGG 42
           R A R     HH  YH  HH    +   HGG
Sbjct: 506 RRAGRRTASVHHLVYHHHHHHHHHYHFSHGG 536



to top

>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2327

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
 Frame = +2

Query: 242  AAERRPPRHRLH-----GSKPGATLPECVPGFTREQLHAGSQF--RERRRNHQTGEREPV 400
            A ER P RHR H      SK G T P  VP   R   H G +   RE   N +   R   
Sbjct: 919  ATEREPRRHRAHRHAQDSSKEG-TAPVLVPKGERRARHRGPRTGPREAENNEEPTRRHRA 977

Query: 401  DLRVQPHF--PGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGALHL 556
              +V P    P R A    +   +     + H+   P    E  A    G LH+
Sbjct: 978  RHKVPPTLQPPEREAAEKESNAVEGDKETRNHQPKEPHCDLEAIAVTGVGPLHM 1031



to top

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 104 HHF*YHQQHHERDEFVGGHGGATAS*NH 21
           HH  +HQ HH  +   GG  G T+  +H
Sbjct: 110 HHHHHHQSHHNNNNHSGGSSGGTSPTHH 137



to top

>NR2F1_BRARE (Q06725) Nuclear receptor Nr2f1 (Steroid receptor homolog SVP 44)|
          Length = 411

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = +2

Query: 443 AIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGALHLQNRRQRPRH 583
           A PA  QQ+      H    P  P  P  PG  G    QN  Q  +H
Sbjct: 27  AQPAREQQQAASAAPHTPQTPSQPGPPSTPGTAGDKGSQNSGQSQQH 73



to top

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 25/128 (19%)
 Frame = +2

Query: 236  GRAAERRPPRHRLHGSKPGAT----------------------LP--ECVPGFTREQLHA 343
            G   ER PP  R    +PGAT                      LP  +  PGF   +   
Sbjct: 827  GLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPP 886

Query: 344  GSQFRERRRNHQTGEREPVDLRVQPHFPGRAALAIPAVHQQEPLRL-QQHRRSLPGDPAE 520
            G Q ++ R  H  G+R  +  + Q   PG A +  P     E   L ++     PG P E
Sbjct: 887  GHQGKDGRPGHP-GQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGE 945

Query: 521  PRAPGLQG 544
               PGL+G
Sbjct: 946  QGLPGLEG 953



to top

>FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear factor) (MNF)|
          Length = 617

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
 Frame = +2

Query: 380 TGEREPVDLRVQPHFP----GRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGA 547
           +G R  + LR  P  P      AA A PA     P +        PG PA P  PG  GA
Sbjct: 8   SGARALLALRSAPCSPVLCAAAAAAAFPATTSPPPAQPP------PGPPALPAEPGPGGA 61

Query: 548 L---HLQNRRQRP 577
           L   H  + R RP
Sbjct: 62  LHRRHCHHHRARP 74



to top

>EMAP_STRPU (Q26613) 77 kDa echinoderm microtubule-associated protein|
          Length = 686

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 259 RPSLCRPAGMPKKVWP*GGCTAGKRAGKAPV--SEEESPKLKMAGKP 125
           RPS  RP     +  P GG   GKR  K P   +EE   ++ + G+P
Sbjct: 23  RPSSARPGSGRTRASPRGGSAGGKRFSKEPQHNAEEGYVRIYLRGRP 69



to top

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = +2

Query: 242  AAERRPPRHRL--HGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGER 391
            AAER P RHR   HG  PG   P            A     ERR  H+TG R
Sbjct: 932  AAEREPRRHRAHRHGPDPGKEGP------------ASGTRGERRARHRTGPR 971



to top

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 215 PDLLRHAGRAAERRPPRHRLHGSKP 289
           P ++R+  R A   PP +R+HGS+P
Sbjct: 329 PPMIRNGARDAPPPPPPYRMHGSEP 353



to top

>HDAC6_HUMAN (Q9UBN7) Histone deacetylase 6 (HD6)|
          Length = 1215

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 287 VLSHEVDDEAAVALPPGRHAEEGLA 213
           VLS EV + AAV  PPG HAE+  A
Sbjct: 593 VLSGEVLNGAAVVRPPGHHAEQDAA 617



to top

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 392 EPVDLRVQPHFPGRAALAIPAVHQ---QEPLRLQQHRRSLPGDPAEPRA 529
           +P +    PH    A ++ PA+H    Q+P R      +LP  PA P A
Sbjct: 841 QPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPA 889



to top

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 29/104 (27%), Positives = 35/104 (33%)
 Frame = +2

Query: 236 GRAAERRPPRHRLHGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQ 415
           GR  ER  P        PG   P  +PGF   + H G       RN + GE     L+ +
Sbjct: 237 GRPGERGLP------GPPGIKGPAGIPGFPGMKGHRGFD----GRNGEKGETGAPGLKGE 286

Query: 416 PHFPGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGA 547
              PG      P              R  PG+   P  PG  GA
Sbjct: 287 NGLPGENGAPGP-----------MGPRGAPGERGRPGLPGAAGA 319



to top

>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor|
          Length = 680

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 416 PHFPGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQG 544
           P  PG A +++P    Q+ L      R  PG+     APG+ G
Sbjct: 144 PGIPGPAGISVPGKPGQQGLTGAPGPRGFPGEKGAQGAPGVNG 186



to top

>ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase domain 19) (Meltrin beta)
            (Metalloprotease and disintegrin dentritic antigen
            marker) (MADDAM)
          Length = 956

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 27/104 (25%), Positives = 39/104 (37%)
 Frame = +2

Query: 215  PDLLRHAGRAAERRPPRHRLHGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGERE 394
            P++LR   +   R PP + L G  P A LP  +    R     GSQ            R 
Sbjct: 781  PEILRKPSQPPPRPPPDY-LRGGSPPAPLPAHLSRAARNSPGPGSQIERTE-----SSRR 834

Query: 395  PVDLRVQPHFPGRAALAIPAVHQQEPLRLQQHRRSLPGDPAEPR 526
            P   R  P  P         +  Q+  R +  +++LP +P   R
Sbjct: 835  PPPSRPIPPAPN-------CIVSQDFSRPRPPQKALPANPVPGR 871



to top

>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 215 PDLLRHAGRAAERRPPRHRLHGSKP 289
           P ++R+  R A   PP +R+HGS+P
Sbjct: 329 PPVIRNGARDAPPPPPPYRMHGSEP 353



to top

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +2

Query: 287 PGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQPHFPGRAALAIPAVHQQ 466
           PG   P   PG    + + G  F+  +     GE+    L+  P  PG+ +       Q+
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPK-----GEKGEQGLQGPPGPPGQIS------EQK 248

Query: 467 EPL--RLQQHRRSLPGDPAEPRAPGLQG 544
            P+    Q+  + LPGD   P  PG++G
Sbjct: 249 RPIDVEFQKGDQGLPGDRGPPGPPGIRG 276



to top

>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
 Frame = +2

Query: 284 KPGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQPH---FPGRAALAIP- 451
           +PG   P+  PG   E+   G+    R      G   P   R  P    FPG+  LA P 
Sbjct: 403 EPGPAGPQGAPGPAGEEGKRGA----RGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 458

Query: 452 -AVHQQEPLRLQQHRRSLPGDPAEPRAPGLQGALHLQNR 565
            A  ++ P  L   + +  GDP  P  PGL GA  L  R
Sbjct: 459 GAPGERGPSGLAGPKGA-NGDPGRPGEPGLPGARGLTGR 496



to top

>MRAW_BUCAI (P57319) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 312

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 23/104 (22%), Positives = 48/104 (46%)
 Frame = +3

Query: 270 DFMAQNLGLRYLNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQLWQF 449
           D +A ++G    ++    +  NF++  +FA     I +VNG ++  G S I +D      
Sbjct: 57  DPIAFSIGSEIKDSRFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDY---- 112

Query: 450 QQFINRSRFVYNNIGGVYREILPNPEHLVSKALYTFKIGANDLA 581
                R  F + N G +  ++  NP + +S + + F+    +++
Sbjct: 113 -----RRGFSFKNDGPL--DMRMNPNYGISASEWLFESNVKEIS 149



to top

>ZN553_HUMAN (Q96MX3) Zinc finger protein 553|
          Length = 618

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
 Frame = +2

Query: 266 HRLHGSKPGATLPECVPGFTREQLHAGSQFRERRRNHQTGER---EPVDLRVQPHFPGRA 436
           HR+H  +     PEC  GF      A S  R +      GER    P    ++PH P   
Sbjct: 470 HRVHTGEKPYLCPECGKGF------ADSSARVKHLRTHRGERARPPPPSTLLRPHNPPGP 523

Query: 437 ALAIPAVHQQEPLRLQQHRRSLPGDPAEPRAPGLQG 544
                      P+  +   R+ P  P++P   G  G
Sbjct: 524 V----------PMAPRPRVRAQPSGPSQPHVCGFCG 549



to top

>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +2

Query: 287 PGATLPECVPGFTREQLHAGSQFRERRRNHQTGEREPVDLRVQPHFPGRAALAIPAVHQQ 466
           PG   P   PG    + + G  F+  +     GE+    L+  P  PG+ +       Q+
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPK-----GEKGEQGLQGPPGPPGQIS------EQK 248

Query: 467 EPL--RLQQHRRSLPGDPAEPRAPGLQG 544
            P+    Q+  + LPGD   P  PG++G
Sbjct: 249 RPIDVEFQKGDQGLPGDRGPPGPPGIRG 276


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,137,579
Number of Sequences: 219361
Number of extensions: 1751716
Number of successful extensions: 7565
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7516
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top