Clone Name | bart39e01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full insert sequence Length = 1198 Score = 321 bits (162), Expect = 1e-84 Identities = 342/402 (85%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 151 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 210 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 275 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 211 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 270 Query: 276 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 335 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 271 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 330 Query: 336 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 395 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 331 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 390 Query: 396 gaagccgtggtacctcgttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||| |||||||| || || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 391 gaagccatggtacctggtgctgggaaatcatgactacaggggtgatgtgctagcacagct 450 Query: 456 tgacccagtcatgcggaagctcgatgagcgattcgtgtgcatgagatcattcgtagtcaa 515 | ||||||| |||| ||| |||| |||||||| | |||||||| || ||| | || || Sbjct: 451 tagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaa 510 Query: 516 tgcagagatcgtggagttcttcttcatcgacaccactccatt 557 ||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 511 tgcagagattgtggatttcttctttatcgacacaactccatt 552
>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full insert sequence Length = 1187 Score = 321 bits (162), Expect = 1e-84 Identities = 342/402 (85%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 140 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 199 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 275 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 200 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 259 Query: 276 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 335 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 260 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 319 Query: 336 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 395 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 320 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 379 Query: 396 gaagccgtggtacctcgttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||| |||||||| || || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 380 gaagccatggtacctggtgctgggaaatcatgactacaggggtgatgtgctagcacagct 439 Query: 456 tgacccagtcatgcggaagctcgatgagcgattcgtgtgcatgagatcattcgtagtcaa 515 | ||||||| |||| ||| |||| |||||||| | |||||||| || ||| | || || Sbjct: 440 tagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaa 499 Query: 516 tgcagagatcgtggagttcttcttcatcgacaccactccatt 557 ||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 500 tgcagagattgtggatttcttctttatcgacacaactccatt 541
>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full insert sequence Length = 1187 Score = 321 bits (162), Expect = 1e-84 Identities = 342/402 (85%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 140 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 199 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 275 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 200 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 259 Query: 276 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 335 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 260 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 319 Query: 336 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 395 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 320 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 379 Query: 396 gaagccgtggtacctcgttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||| |||||||| || || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 380 gaagccatggtacctggtgctgggaaatcatgactacaggggtgatgtgctagcacagct 439 Query: 456 tgacccagtcatgcggaagctcgatgagcgattcgtgtgcatgagatcattcgtagtcaa 515 | ||||||| |||| ||| |||| |||||||| | |||||||| || ||| | || || Sbjct: 440 tagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaa 499 Query: 516 tgcagagatcgtggagttcttcttcatcgacaccactccatt 557 ||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 500 tgcagagattgtggatttcttctttatcgacacaactccatt 541
>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full insert sequence Length = 1399 Score = 321 bits (162), Expect = 1e-84 Identities = 342/402 (85%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 165 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 224 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 275 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 225 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 284 Query: 276 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 335 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 285 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 344 Query: 336 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 395 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 345 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 404 Query: 396 gaagccgtggtacctcgttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||| |||||||| || || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 405 gaagccatggtacctggtgctgggaaatcatgactacaggggtgatgtgctagcacagct 464 Query: 456 tgacccagtcatgcggaagctcgatgagcgattcgtgtgcatgagatcattcgtagtcaa 515 | ||||||| |||| ||| |||| |||||||| | |||||||| || ||| | || || Sbjct: 465 tagcccagtcttgcgaaagatcgaccagcgattcatttgcatgaggtcgttcattgttaa 524 Query: 516 tgcagagatcgtggagttcttcttcatcgacaccactccatt 557 ||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 525 tgcagagattgtggatttcttctttatcgacacaactccatt 566
>gb|AY108047.1| Zea mays PCO103710 mRNA sequence Length = 1513 Score = 218 bits (110), Expect = 2e-53 Identities = 323/394 (81%) Strand = Plus / Plus Query: 158 tggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactggggcc 217 ||||||||||| ||| | ||| ||| ||||| |||||||||||| |||| |||||||||| Sbjct: 234 tggagcacccgcccaaggacggcggctcgctcagcctgctcgtcgtcggcgactggggcc 293 Query: 218 gcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaagc 277 | |||||| | |||||||| |||| |||||| | |||||||| | ||| |||||| ||| Sbjct: 294 gaaagggcgcgttcaaccagtccagggtcgcccatcagatgggcagggttggggagcagc 353 Query: 278 tggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacgggcg 337 | |||||||||||| | |||||||||||||||||||||||| |||| || |||||| Sbjct: 354 tcagcatcgacttcgtcatatccaccggcgacaacttctacgagaacggcctgacgggca 413 Query: 338 tccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgcaga 397 ||||| | ||||||| |||| |||||| ||||||||| || |||||| |||||| Sbjct: 414 cggatgacgaggcgttcgagcagtctttcaccgatatctacacggcgaagagcctgcaga 473 Query: 398 agccgtggtacctcgttcttggaaaccatgactaccggggtgatgcgctagcccagcttg 457 ||||||||||||| || || ||||||||||||||| ||||||| ||||| || ||||| Sbjct: 474 agccgtggtacctggtgctgggaaaccatgactacaggggtgacgcgctcgcgcagctga 533 Query: 458 acccagtcatgcggaagctcgatgagcgattcgtgtgcatgagatcattcgtagtcaatg 517 ||| ||| |||||||| |||| || ||| | ||||| | ||||||||| ||||| | Sbjct: 534 gcccggtcctgcggaagatcgacagccggttcatttgcatcaaatcattcgtcgtcaacg 593 Query: 518 cagagatcgtggagttcttcttcatcgacaccac 551 |||| |||||||||||||||||| | |||||||| Sbjct: 594 cagaaatcgtggagttcttcttcgttgacaccac 627
>dbj|AK069660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L04, full insert sequence Length = 1313 Score = 133 bits (67), Expect = 7e-28 Identities = 226/279 (81%) Strand = Plus / Plus Query: 177 cgacgggtcgctgagcctgctcgtcatcggggactggggccgcaagggcaccttcaacca 236 |||||||||||||||||| |||| | |||| |||||||| ||| ||| | | |||||| Sbjct: 191 cgacgggtcgctgagcctcctcgccgtcggcgactgggggcgccgcggcgcgtacaacca 250 Query: 237 atccatggtcgcagaccagatggggaaggtcggggagaagctggacatcgacttcgtggt 296 || |||||||| | |||||||| | || ||||||||| |||||||||||||||| | Sbjct: 251 gtcgatggtcgccgcgcagatgggaatagtaggggagaagatggacatcgacttcgtcat 310 Query: 297 ctccaccggcgacaacttctacgaggacggactcacgggcgtccatgaccggcagttcga 356 |||||||||||||||||||||| || |||| ||||| |||||| |||| | ||||| Sbjct: 311 ctccaccggcgacaacttctacaagaacggcctcaccggcgtcgatgataaggccttcga 370 Query: 357 ggagtccttcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttct 416 || |||||| || |||||||| ||||||||| | || ||||| |||||| |||||| Sbjct: 371 agaatccttctccgacatctacaccgccaagagcctccacaagccatggtacaccgttct 430 Query: 417 tggaaaccatgactaccggggtgatgcgctagcccagct 455 ||| |||||||||||| |||| || || || |||||||| Sbjct: 431 tggcaaccatgactacaggggcgacgccctcgcccagct 469
>gb|AY108108.1| Zea mays PCO072542 mRNA sequence Length = 1591 Score = 131 bits (66), Expect = 3e-27 Identities = 168/202 (83%) Strand = Plus / Plus Query: 137 gcgccgcggagctcccgctggtggagcacccggccaggaacgacgggtcgctgagcctgc 196 ||||||||||| | || | | |||||||| ||||||||| |||||| ||||||| |||| Sbjct: 359 gcgccgcggagttgccccggctggagcactcggccaggagcgacggatcgctgaagctgc 418 Query: 197 tcgtcatcggggactggggccgcaagggcaccttcaaccaatccatggtcgcagaccaga 256 ||||| ||||||||||||| |||||||| || |||||| ||| |||||| ||||||| Sbjct: 419 tcgtcgtcggggactggggacgcaaggggactcacaaccagtcccgggtcgccgaccaga 478 Query: 257 tggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaacttct 316 |||| | ||||||| ||||||| || |||||||| || | |||||||| |||||||||| Sbjct: 479 tgggaagggtcgggaagaagctcgatatcgactttgttatatccaccggggacaacttct 538 Query: 317 acgaggacggactcacgggcgt 338 || || |||| |||| |||||| Sbjct: 539 acaagaacggcctcaagggcgt 560 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 372 tatctacacagccaagagcttgcagaagccgtggtacctcgttcttggaaaccatgacta 431 |||||||||||| | ||||| |||||||| |||||| ||||| ||||| ||||| || Sbjct: 594 tatctacacagctcaaagcttacagaagccatggtactcagttctaggaaatcatgatta 653 Query: 432 ccggggtgatgcgctagcccagcttgacccagtcatgcggaagctcgatgagcgattcgt 491 | |||| ||||||| || |||||| ||||||| || ||||| |||| || |||||| | Sbjct: 654 caggggcaatgcgctcgcacagcttagcccagtcttgaggaagatcgacgaccgattcat 713 Query: 492 gtgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccac 551 ||||||||||| ||| | || || ||||| | ||||| |||||||| |||||||||| Sbjct: 714 ttgcatgagatcgttcatcgttaacgcagaacttgtggacttcttctttgtcgacaccac 773 Query: 552 tccattcc 559 ||| |||| Sbjct: 774 tccgttcc 781
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 7292289 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 7292348 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgc 248 ||| |||||||| | ||||||||||| |||||| Sbjct: 7292349 ccggaagggcacgtacaaccaatccagggtcgc 7292381 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 253 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 312 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 7293100 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 7293159 Query: 313 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 372 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 7293160 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 7293219 Query: 373 atctacacagccaagagcttgcagaagccgtggtacct 410 |||||||| || ||||||||||||||||| |||||||| Sbjct: 7293220 atctacacggcaaagagcttgcagaagccatggtacct 7293257
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 43545 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 43604 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgc 248 ||| |||||||| | ||||||||||| |||||| Sbjct: 43605 ccggaagggcacgtacaaccaatccagggtcgc 43637 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 253 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 312 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 44356 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 44415 Query: 313 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 372 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 44416 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 44475 Query: 373 atctacacagccaagagcttgcagaagccgtggtacct 410 |||||||| || ||||||||||||||||| |||||||| Sbjct: 44476 atctacacggcaaagagcttgcagaagccatggtacct 44513
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 156 ggtggagcacccggccaggaacgacgggtcgctgagcctgctcgtcatcggggactgggg 215 ||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| Sbjct: 7290184 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 7290243 Query: 216 ccgcaagggcaccttcaaccaatccatggtcgc 248 ||| |||||||| | ||||||||||| |||||| Sbjct: 7290244 ccggaagggcacgtacaaccaatccagggtcgc 7290276 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 253 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 312 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 7290995 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 7291054 Query: 313 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 372 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 7291055 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 7291114 Query: 373 atctacacagccaagagcttgcagaagccgtggtacct 410 |||||||| || ||||||||||||||||| |||||||| Sbjct: 7291115 atctacacggcaaagagcttgcagaagccatggtacct 7291152
>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid phosphatase (OSJNBa0023I19.10), mRNA Length = 1008 Score = 109 bits (55), Expect = 1e-20 Identities = 223/279 (79%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggcaccttcaaccaatccatgg 244 ||||| |||| |||||| |||| ||||||||||| |||||| || |||||| | | | Sbjct: 110 cgctgcgcctcctcgtcgtcggcgactggggccggaagggcggctacaaccagacaagag 169 Query: 245 tcgcagaccagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccg 304 | ||||| |||||||||||||| | |||| || ||| ||||||||||| || || |||| Sbjct: 170 ttgcagaacagatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccg 229 Query: 305 gcgacaacttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtcct 364 |||||||||||| ||| |||| ||| | |||||| | ||| | |||| | || |||| Sbjct: 230 gcgacaacttcttggagaacggcctcgccggcgtcgacgacatggcgttccatgactcct 289 Query: 365 tcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttcttggaaacc 424 ||| | ||||||| || |||||||||| ||||| |||||||| ||||||||||||| Sbjct: 290 tcatggatgtctacacggctcagagcttgcacaagccatggtaccttgttcttggaaacc 349 Query: 425 atgactaccggggtgatgcgctagcccagcttgacccag 463 |||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 350 atgactacaggggaaatgtgctagcacagattgacccag 388
>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full insert sequence Length = 1195 Score = 109 bits (55), Expect = 1e-20 Identities = 223/279 (79%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggcaccttcaaccaatccatgg 244 ||||| |||| |||||| |||| ||||||||||| |||||| || |||||| | | | Sbjct: 117 cgctgcgcctcctcgtcgtcggcgactggggccggaagggcggctacaaccagacaagag 176 Query: 245 tcgcagaccagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccg 304 | ||||| |||||||||||||| | |||| || ||| ||||||||||| || || |||| Sbjct: 177 ttgcagaacagatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccg 236 Query: 305 gcgacaacttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtcct 364 |||||||||||| ||| |||| ||| | |||||| | ||| | |||| | || |||| Sbjct: 237 gcgacaacttcttggagaacggcctcgccggcgtcgacgacatggcgttccatgactcct 296 Query: 365 tcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttcttggaaacc 424 ||| | ||||||| || |||||||||| ||||| |||||||| ||||||||||||| Sbjct: 297 tcatggatgtctacacggctcagagcttgcacaagccatggtaccttgttcttggaaacc 356 Query: 425 atgactaccggggtgatgcgctagcccagcttgacccag 463 |||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 357 atgactacaggggaaatgtgctagcacagattgacccag 395
>gb|AC151599.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018H03, complete sequence Length = 93081 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 268 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 327 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 59215 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 59156 Query: 328 ctcacgggcgtccatga 344 ||||| |||||| |||| Sbjct: 59155 ctcaccggcgtcgatga 59139 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 177 cgacgggtcgctgagcctgctcgtcatcggggactgggg 215 |||||||||||||||||| |||| | |||| |||||||| Sbjct: 60822 cgacgggtcgctgagcctcctcgccgtcggcgactgggg 60784 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||||| |||||||||||| |||| || || || |||||||| Sbjct: 58732 gttcttggcaaccatgactacaggggcgacgccctcgcccagct 58689
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 268 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 327 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 16734 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 16675 Query: 328 ctcacgggcgtccatga 344 ||||| |||||| |||| Sbjct: 16674 ctcaccggcgtcgatga 16658 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 177 cgacgggtcgctgagcctgctcgtcatcggggactgggg 215 |||||||||||||||||| |||| | |||| |||||||| Sbjct: 18341 cgacgggtcgctgagcctcctcgccgtcggcgactgggg 18303 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||||| |||||||||||| |||| || || || |||||||| Sbjct: 16251 gttcttggcaaccatgactacaggggcgacgccctcgcccagct 16208
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 268 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 327 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 19794273 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 19794214 Query: 328 ctcacgggcgtccatga 344 ||||| |||||| |||| Sbjct: 19794213 ctcaccggcgtcgatga 19794197 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 177 cgacgggtcgctgagcctgctcgtcatcggggactgggg 215 |||||||||||||||||| |||| | |||| |||||||| Sbjct: 19795880 cgacgggtcgctgagcctcctcgccgtcggcgactgggg 19795842 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagct 455 |||||||| |||||||||||| |||| || || || |||||||| Sbjct: 19793790 gttcttggcaaccatgactacaggggcgacgccctcgcccagct 19793747
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagcttgacccag 463 ||||||||||||||||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 1062711 gttcttggaaaccatgactacaggggaaatgtgctagcacagattgacccag 1062762 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 313 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062281 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062340 Query: 314 tct 316 ||| Sbjct: 1062341 tct 1062343 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggc 225 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062071 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062111
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagcttgacccag 463 ||||||||||||||||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 60164 gttcttggaaaccatgactacaggggaaatgtgctagcacagattgacccag 60215 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 313 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 59734 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 59793 Query: 314 tct 316 ||| Sbjct: 59794 tct 59796 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggc 225 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 59524 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 59564
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagcttgacccag 463 ||||||||||||||||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 1062711 gttcttggaaaccatgactacaggggaaatgtgctagcacagattgacccag 1062762 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 313 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062281 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062340 Query: 314 tct 316 ||| Sbjct: 1062341 tct 1062343 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggc 225 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062071 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062111
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 412 gttcttggaaaccatgactaccggggtgatgcgctagcccagcttgacccag 463 ||||||||||||||||||||| |||| ||| |||||| ||| ||||||||| Sbjct: 1062708 gttcttggaaaccatgactacaggggaaatgtgctagcacagattgacccag 1062759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 313 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062278 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062337 Query: 314 tct 316 ||| Sbjct: 1062338 tct 1062340 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 cgctgagcctgctcgtcatcggggactggggccgcaagggc 225 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062068 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062108
>dbj|AK106004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A04, full insert sequence Length = 1301 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 356 aggagtccttcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttc 415 ||||||||||||||| |||||||| || | ||| | |||||||| |||||| | |||| Sbjct: 390 aggagtccttcaccaacatctacaccgctgatagcctccagaagccttggtacattgttc 449 Query: 416 ttggaaaccatgactac 432 | || |||||||||||| Sbjct: 450 tcggcaaccatgactac 466
>dbj|AK061321.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F02, full insert sequence Length = 1322 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 356 aggagtccttcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttc 415 ||||||||||||||| |||||||| || | ||| | |||||||| |||||| | |||| Sbjct: 398 aggagtccttcaccaacatctacaccgctgatagcctccagaagccttggtacattgttc 457 Query: 416 ttggaaaccatgactac 432 | || |||||||||||| Sbjct: 458 tcggcaaccatgactac 474
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 94 gcggccgtggcgctcgccgtcctg 117 |||||||||||||||||||||||| Sbjct: 2440511 gcggccgtggcgctcgccgtcctg 2440488
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 105 gctcgccgtcctggccgtggccgcgctc 132 ||||||||| |||||||||||||||||| Sbjct: 3171506 gctcgccgtgctggccgtggccgcgctc 3171533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ccggcgcgtccgcggccgtg 102 |||||||||||||||||||| Sbjct: 3899870 ccggcgcgtccgcggccgtg 3899889
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 gaagctggacatcgacttcgtgg 295 ||||||||||||||||||||||| Sbjct: 1122325 gaagctggacatcgacttcgtgg 1122303 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ggagcggcgccggcgcgtccgcggc 98 ||||| ||||||||||||||||||| Sbjct: 448123 ggagctgcgccggcgcgtccgcggc 448147
>emb|AJ617676.1| Lupinus luteus mRNA for putative acid phosphatase (acPase3 gene) Length = 1328 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 252 ccagatggggaaggtcggggagaagctggacatcgactt 290 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 210 ccagatgggaaaggttggggagaagcttgacatagactt 248
>ref|NM_101339.3| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT1G14700 mRNA, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 493 tgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccact 552 ||||||||||| ||| | || ||||| |||||||| || || |||||| ||||||| ||| Sbjct: 526 tgcatgagatctttcattgtaaatgctgagatcgtcgatttgttcttcgtcgacacaact 585 Query: 553 cc 554 || Sbjct: 586 cc 587
>gb|AY686599.1| Arabidopsis thaliana putative purple acid phosphatase (PAP3) mRNA, complete cds Length = 1101 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 493 tgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccact 552 ||||||||||| ||| | || ||||| |||||||| || || |||||| ||||||| ||| Sbjct: 526 tgcatgagatctttcattgtaaatgctgagatcgtcgatttgttcttcgtcgacacaact 585 Query: 553 cc 554 || Sbjct: 586 cc 587
>ref|XM_478795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 catggcgaggaggagcggcgccggcg 88 |||||||||||||||||||| ||||| Sbjct: 240 catggcgaggaggagcggcggcggcg 265
>gb|BT000877.1| Arabidopsis thaliana clone C105017 putative purple acid phosphatase (At1g14700) mRNA, complete cds Length = 1132 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 493 tgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccact 552 ||||||||||| ||| | || ||||| |||||||| || || |||||| ||||||| ||| Sbjct: 526 tgcatgagatctttcattgtaaatgctgagatcgtcgatttgttcttcgtcgacacaact 585 Query: 553 cc 554 || Sbjct: 586 cc 587
>gb|AY070051.1| Arabidopsis thaliana putative purple acid phosphatase (At1g14700) mRNA, partial cds Length = 1145 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 493 tgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccact 552 ||||||||||| ||| | || ||||| |||||||| || || |||||| ||||||| ||| Sbjct: 486 tgcatgagatctttcattgtaaatgctgagatcgtcgatttgttcttcgtcgacacaact 545 Query: 553 cc 554 || Sbjct: 546 cc 547
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 cgcggccgtggcgctcgccgtc 114 |||||||||||||||||||||| Sbjct: 569457 cgcggccgtggcgctcgccgtc 569436
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 catggcgaggaggagcggcgccggcg 88 |||||||||||||||||||| ||||| Sbjct: 23103272 catggcgaggaggagcggcggcggcg 23103297 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 23900457 ggcgaggaggagcggcgccg 23900476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 6028474 ggcgaggaggagcggcgccg 6028455
>emb|BX814857.1|CNS0ABF4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 493 tgcatgagatcattcgtagtcaatgcagagatcgtggagttcttcttcatcgacaccact 552 ||||||||||| ||| | || ||||| |||||||| || || |||||| ||||||| ||| Sbjct: 558 tgcatgagatctttcattgtaaatgctgagatcgtcgatttgttcttcgtcgacacaact 617 Query: 553 cc 554 || Sbjct: 618 cc 619
>dbj|AK120026.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C10, full insert sequence Length = 2219 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 catggcgaggaggagcggcgccggcg 88 |||||||||||||||||||| ||||| Sbjct: 1729 catggcgaggaggagcggcggcggcg 1754
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 catggcgaggaggagcggcgccggcg 88 |||||||||||||||||||| ||||| Sbjct: 47456 catggcgaggaggagcggcggcggcg 47481
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 276 gctggacatcgacttcgtggtctccaccggcgac 309 ||||||||||||| ||| ||||||| |||||||| Sbjct: 3618089 gctggacatcgacgtcgcggtctccgccggcgac 3618122
>ref|XM_493906.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2118 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gcggcgccggcgcgtccgcgg 97 ||||||||||||||||||||| Sbjct: 211 gcggcgccggcgcgtccgcgg 191
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcgc 89 ||||||||||||||||||||| Sbjct: 35 gaggaggagcggcgccggcgc 55
>gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome 3, complete sequence Length = 207726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 caagagcttgcagaagccgtg 404 ||||||||||||||||||||| Sbjct: 127814 caagagcttgcagaagccgtg 127834
>gb|AF308878.1| Lilium longiflorum acid phosphatase mRNA, partial cds Length = 334 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 352 ttcgaggagtccttcaccagtatctacacagccaagagcttgcagaagc 400 ||||||| |||||||| | ||| ||||| || |||||||||||||||| Sbjct: 280 ttcgaggcatccttcacaaatatatacactgcaaagagcttgcagaagc 328
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 cgcggccgtggcgctcgccgtcctg 117 ||||||||||||||| ||||||||| Sbjct: 3179236 cgcggccgtggcgcttgccgtcctg 3179212
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 gctcgccgtcctggccgtggccgcg 129 |||||||||||||||||| |||||| Sbjct: 203015 gctcgccgtcctggccgtcgccgcg 203039
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcgc 89 ||||||||||||||||||||| Sbjct: 8458604 gaggaggagcggcgccggcgc 8458624
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gcggcgccggcgcgtccgcgg 97 ||||||||||||||||||||| Sbjct: 989908 gcggcgccggcgcgtccgcgg 989888
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcgc 89 ||||||||||||||||||||| Sbjct: 74321 gaggaggagcggcgccggcgc 74341
>ref|XM_313009.2| Anopheles gambiae str. PEST ENSANGP00000020356 (ENSANGG00000017867), mRNA Length = 1156 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcgccgtcctggccgtggccg 127 ||||||||||||||||||||| Sbjct: 198 tcgccgtcctggccgtggccg 218
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 gccgcgctccggtgcgccgcg 144 ||||||||||||||||||||| Sbjct: 3794955 gccgcgctccggtgcgccgcg 3794975
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gcggcgccggcgcgtccgcgg 97 ||||||||||||||||||||| Sbjct: 80305 gcggcgccggcgcgtccgcgg 80285
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcg 88 |||||||||||||||||||| Sbjct: 153458 gaggaggagcggcgccggcg 153477
>ref|XM_518707.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA A630077B13 gene; RIKEN cDNA 2810048G17 (LOC462959), mRNA Length = 1191 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 608 tgcgccgcggagctgccgctggtg 631
>ref|XM_478936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 633 ggcgaggaggagcggcgccg 652
>ref|XM_477125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 813 ggcgaggaggagcggcgccg 794
>ref|XM_867270.1| PREDICTED: Bos taurus similar to neuron navigator 1 (LOC615460), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggggaaggtcggggagaagc 277 |||||||||||||||||||| Sbjct: 972 ggggaaggtcggggagaagc 991
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cgcggccgtggcgctcgccg 112 |||||||||||||||||||| Sbjct: 1829192 cgcggccgtggcgctcgccg 1829173
>gb|DQ097235.1| Toxoplasma gondii ATP-binding cassette sub-family B member 4 (ABC.B4) gene, complete cds Length = 9120 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tggcgaggaggagcggcgcc 84 |||||||||||||||||||| Sbjct: 1272 tggcgaggaggagcggcgcc 1253
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gccgcgctccggtgcgccgcggag 147 ||||||||||| |||||||||||| Sbjct: 72470 gccgcgctccgttgcgccgcggag 72493
>emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene) Length = 1345 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tggcgctcgccgtcctggcc 120 |||||||||||||||||||| Sbjct: 61 tggcgctcgccgtcctggcc 80
>gb|AC159964.5| Mus musculus chromosome 1, clone RP24-321N12, complete sequence Length = 179413 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcg 88 |||||||||||||||||||| Sbjct: 58468 gaggaggagcggcgccggcg 58487
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctgagcctgctcgtcatcgg 206 |||||||||||||||||||| Sbjct: 2664130 ctgagcctgctcgtcatcgg 2664111
>ref|XM_993832.1| PREDICTED: Mus musculus hypothetical protein LOC676894 (LOC676894), mRNA Length = 651 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaggaggagcggcgccggcg 88 |||||||||||||||||||| Sbjct: 540 gaggaggagcggcgccggcg 559
>ref|XM_536851.2| PREDICTED: Canis familiaris similar to C56E6.6 (LOC479725), mRNA Length = 2331 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccatggcgaggaggagcggc 81 |||||||||||||||||||| Sbjct: 271 ccatggcgaggaggagcggc 252
>emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on chromosome 6q21 Contains the 3' end of a novel gene, the SART2 gene for squamous cell carcinoma antigen recognised by T cell, a chromobox homolog 3 (HP1 gamma homolog, Drosophila) (CBX3) pseudogene, a keratin 18 (KRT18) pseudogene, a novel gene, part of a novel gene and two CpG islands, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 128336 tgcgccgcggagctgccgctggtg 128359
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtggtctccaccggcgacaa 311 |||||||||||||||||||| Sbjct: 948208 gtggtctccaccggcgacaa 948227
>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence Length = 171421 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacctttgttaaacaaacca 20 |||||||||||||||||||| Sbjct: 126672 cacctttgttaaacaaacca 126691
>emb|X05167.1|HVLEU Barley gene for thiol protease aleurain Length = 5372 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tggcgctcgccgtcctggcc 120 |||||||||||||||||||| Sbjct: 1483 tggcgctcgccgtcctggcc 1502
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agctggacatcgacttcgtg 294 |||||||||||||||||||| Sbjct: 5653928 agctggacatcgacttcgtg 5653947
>dbj|AK147591.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1085H19 product:signal-induced proliferation-associated 1 like 1, full insert sequence Length = 8207 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gccgcgctccggtgcgccgcggag 147 ||||||||||| |||||||||||| Sbjct: 440 gccgcgctccgttgcgccgcggag 417
>dbj|AK044664.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031B08 product:similar to CENTROSOME-ASSOCIATED PROTEIN 350 [Homo sapiens], full insert sequence Length = 1568 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaggaggagcggcgccggcg 88 |||||||||||||||||||| Sbjct: 67 gaggaggagcggcgccggcg 48
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccggcgc 89 ||||||||||||||| |||||||| Sbjct: 28341089 ggcgaggaggagcggagccggcgc 28341112
>ref|NM_001010919.1| Homo sapiens hypothetical protein LOC441168 (LOC441168), mRNA Length = 1109 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 531 tgcgccgcggagctgccgctggtg 554
>ref|XM_341136.2| PREDICTED: Rattus norvegicus centrosome-associated protein 350 (Cap350), mRNA Length = 7943 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaggaggagcggcgccggcg 88 |||||||||||||||||||| Sbjct: 66 gaggaggagcggcgccggcg 47
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cgccggcgcgtccgcggccg 100 |||||||||||||||||||| Sbjct: 3917478 cgccggcgcgtccgcggccg 3917497
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 55384 ggcgaggaggagcggcgccg 55403
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 83644 ggcgaggaggagcggcgccg 83625
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccg 85 |||||||||||||||||||| Sbjct: 88957 ggcgaggaggagcggcgccg 88976
>emb|AJ339001.1|HSA339001 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GM8R Length = 718 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ340532.1|HSA340532 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XI21R Length = 712 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ340095.1|HSA340095 Homo sapiens genomic sequence surrounding NotI site, clone NL6-BO10R Length = 674 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ323676.1|HSA323676 Homo sapiens genomic sequence surrounding NotI site, clone NR1-085C Length = 585 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tgcgccgcggagctcccgctggtg 159 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>gb|AF126490.1|AF126490 Rhodobacter sphaeroides f. sp. denitrificans Nor operon, partial sequence Length = 4297 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 atggcgaggaggagcggcgccggc 87 |||||||||||||||| ||||||| Sbjct: 843 atggcgaggaggagcgccgccggc 866
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 agctggacatcgacttcgtg 294 |||||||||||||||||||| Sbjct: 1204941 agctggacatcgacttcgtg 1204922
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccgcgctccggtgcgccgcg 144 |||||||||||||||||||| Sbjct: 1123574 ccgcgctccggtgcgccgcg 1123593
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggcgaggaggagcggcgccggcgc 89 ||||||||||||||| |||||||| Sbjct: 133397 ggcgaggaggagcggagccggcgc 133420
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacctttgttaaacaaacca 20 |||||||||||||||||||| Sbjct: 1140140 cacctttgttaaacaaacca 1140159 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,599,548 Number of Sequences: 3902068 Number of extensions: 3599548 Number of successful extensions: 75108 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72916 Number of HSP's gapped (non-prelim): 2188 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)