>PSMF1_ARATH (Q9M330) Probable proteasome inhibitor|
          Length = 302

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
 Frame = +3

Query: 162 FRGAHDGVXXXXXXXXXXXGYSLCAVGPAALTDPL--PAVDDEVGIDGWNSMDNCYAFLY 335
           FR  HD V           GY L A G  A  D     +  ++VGI+GWN  +  YAF+Y
Sbjct: 18  FRNNHDKVAFAIHSSFVASGYILTATGRPAFADEALSSSSQNDVGIEGWNEFEGEYAFVY 77

Query: 336 SKEEEGKKKRILVKCXXXXXXXXXXXXXXEAQHKEPCNVQINVKDFFSEEQPKNYKDMYK 515
           +  ++G KK ILVKC                   EP +++I V D+  E    +Y   +K
Sbjct: 78  ANPKKGSKK-ILVKCLAMDDKLLVDAIADGG--AEPAHLEIKVGDYAEESNEGDYSAQFK 134

Query: 516 NFAGFINTLKLSLLVELDGKDAAAAQK 596
           N    +  L+  ++ +LDGK    A +
Sbjct: 135 NLDKLVTDLQSEIIDKLDGKPKPVASR 161

>YTZ4_AGRVI (P70796) Hypothetical 31.6 kDa protein in TAR-I ttuC' 3'region|
           (ORFZ4)
          Length = 280

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 266 QGVGKRGRTNGAERVSSGEERGVCGKRDAIVGAAEDGARGLHDRQRGR 123
           +G  + G      R ++GEER  CG+R  + G+A  G     DR+ GR
Sbjct: 152 RGERRSGNCQQQGRHATGEERAECGRRQRLSGSALAGHLVAIDRRHGR 199

>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
           (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 536 INEARKILVHILVILGLFFREEILH 462
           IN  R ++V  LVILGLFF   ILH
Sbjct: 272 INPYRMLIVLRLVILGLFFHYRILH 296

>CTPA_MYCLE (P46839) Cation-transporting P-type ATPase A (EC 3.6.3.-)|
          Length = 780

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 293 NSHLIVNCGQGVGKRGRTNGAERVSSGEERGVCGKRDAIVGAAEDGARGLHDR 135
           NS  +V   +    RG T     +  GE+ GV    DA+  +A D    LHDR
Sbjct: 518 NSTTLVTARRNAELRGETAVFVEID-GEQCGVIAVADAVKASAADAVAALHDR 569

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 536 INEARKILVHILVILGLFFREEILH 462
           IN  R ++V  LVILGLFF   ILH
Sbjct: 260 INPYRMLIVLRLVILGLFFHYRILH 284

>RL17B_YEAST (P46990) 60S ribosomal protein L17-B (YL17-B)|
          Length = 183

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -3

Query: 290 SHLIVNCGQGVGKR-----GRTNGAERVSSGEERGVCGKRDAIVGAAEDGARGLHDRQRG 126
           SH+ VN      +R     GR N  E   S  E  V  K +A+  AAE     L  RQRG
Sbjct: 114 SHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQRG 173

Query: 125 RVS 117
           R++
Sbjct: 174 RIA 176

>RL17A_YEAST (P05740) 60S ribosomal protein L17-A (YL17-A)|
          Length = 183

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -3

Query: 290 SHLIVNCGQGVGKR-----GRTNGAERVSSGEERGVCGKRDAIVGAAEDGARGLHDRQRG 126
           SH+ VN      +R     GR N  E   S  E  V  K +A+  AAE     L  RQRG
Sbjct: 114 SHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQRG 173

Query: 125 RVS 117
           R++
Sbjct: 174 RIA 176

>SPR2B_MOUSE (O70554) Small proline-rich protein 2B|
          Length = 98

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 366 CASSCPPPPWSTKRHSNYPYCSTHQFPP 283
           C   CPP PW        P C   QFPP
Sbjct: 68  CCEPCPPQPWQ-------PKCPPVQFPP 88

>RY44_DROME (Q24498) Ryanodine receptor 44F|
          Length = 5127

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 309 MDNCYAFLYSKEEEGKKKRILVKC 380
           MD+C  F  S+EEE K  R++ KC
Sbjct: 385 MDDCLDFSRSQEEESKTARVIRKC 408

>FAS1_CANAL (P34731) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:|
           3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
           (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase
           [NADH] (EC 1.3.1.9); [Acyl-carrier-protein]
           acetyltransferase (EC 2.
          Length = 2037

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 471 FFSEEQPKNYKDMYKNFAGFINTLKLSLLVELDGKD 578
           F  +++P +  ++Y  F GFI+  +   +VEL  KD
Sbjct: 46  FAGDDEPSSPAELYGKFIGFISNAQFPQIVELSLKD 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,562,703
Number of Sequences: 219361
Number of extensions: 1297076
Number of successful extensions: 4360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4350
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)