ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39d09 |
|---|---|
| Clone Library Name | barley_pub |
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 69.7 bits (169), Expect = 5e-12 Identities = 46/163 (28%), Positives = 74/163 (45%) Frame = +3 Query: 78 MATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL 257 MA Q +++ TE +LLQ Q +W H + SM+ +CA++LGIP +H G +L L Sbjct: 1 MALQKVDISLSTE-QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQL 59 Query: 258 VAALSLPPAKLPYLRRIMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDGVAVDGHPS 437 + ++ + K +R+MR L Y LTP S LLL + + Sbjct: 60 LQSIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLKEAPL----T 115 Query: 438 QTSLVLAATSRHCLEAAMGLSDWFKKDVAASPFQDLHGVTLFD 566 T LV +S+WF + A+ F+ +G T ++ Sbjct: 116 VTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWE 158
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 68.9 bits (167), Expect = 9e-12 Identities = 49/163 (30%), Positives = 75/163 (46%) Frame = +3 Query: 78 MATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL 257 MA Q +++ TE +LLQ QA +W H + SM+ +CA++LGIP +H +L L Sbjct: 1 MALQNMDISLSTE-QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQL 59 Query: 258 VAALSLPPAKLPYLRRIMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDGVAVDGHPS 437 + A+ + K +R+MR L Y LTP S LLL G + P Sbjct: 60 LKAIPINKEKSQSFQRLMRAL-VNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAP- 117 Query: 438 QTSLVLAATSRHCLEAAMGLSDWFKKDVAASPFQDLHGVTLFD 566 LV +S+WFK + A+ F+ +G T ++ Sbjct: 118 ---LVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWE 157
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 63.2 bits (152), Expect = 5e-10 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Frame = +3 Query: 111 TEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKL 290 T+ LL Q +LW + +M SMA + A+ L I IH GGAASL +++ + L P+++ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 291 PYLRRIMRLLXXXXXXXX----XXXXXXXXXXYRLTPLSWLLLDGVAVDGHPSQTSLVLA 458 LRR+MR+L Y LTP+S LL+ + +QT L Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIG--SQSSQLAQTPLAAM 126 Query: 459 ATSRHCLEAAMGLSDWFKKDVA-ASPFQDLHG 551 + L WF+ ++ F+ HG Sbjct: 127 VLDPTIVSPFSELGAWFQHELPDPCIFKHTHG 158
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 52.4 bits (124), Expect = 9e-07 Identities = 26/68 (38%), Positives = 44/68 (64%) Frame = +3 Query: 117 AELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPY 296 +E+ + QA L++H ++ SM+ + AV + IP IH+ G SL +LV+ L +P +K+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 297 LRRIMRLL 320 +RR+MR L Sbjct: 71 VRRLMRYL 78
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 48.5 bits (114), Expect = 1e-05 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 8/116 (6%) Frame = +3 Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305 ++ QA +W+H + ++ + V LGIP IH+ G +L LV L L + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 306 IMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDG--------VAVDGHPSQTSL 449 MR L Y LTP S LL+ G V + HP + S+ Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSV 127
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = +3 Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305 L QA LW + S+ +CAV+L + IH+ G + +L +L + L P L R Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 306 IMRLL 320 +MR L Sbjct: 68 VMRYL 72
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 37.4 bits (85), Expect = 0.030 Identities = 33/147 (22%), Positives = 61/147 (41%) Frame = +3 Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305 ++ QA +W+ + S+ +CAV+LGI I + +L DL + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 306 IMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDGVAVDGHPSQTSLVLAATSRHCLEA 485 I+R L Y L P++ LL + + S ++L T + + Sbjct: 72 ILRYL-VKMEILRVEKSDDGQKKYALEPIATLL----SRNAKRSMVPMILGMTQKDFMTP 126 Query: 486 AMGLSDWFKKDVAASPFQDLHGVTLFD 566 + D + A F+ G+T+++ Sbjct: 127 WHSMKDGLSDNGTA--FEKAMGMTIWE 151
>PUR6_YEAST (P21264) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 571 Score = 33.9 bits (76), Expect = 0.33 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +3 Query: 66 IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245 + +A + VP E ++ R S Y ++ A K GI T I GGAA Sbjct: 417 VMSAACAVLKDFGVPFEVTIVSAHRTPHRMSAYAIS------ASKRGIKTIIAGAGGAAH 470 Query: 246 LPDLVAALS-LPPAKLP 293 LP +VAA++ LP +P Sbjct: 471 LPGMVAAMTPLPVIGVP 487
>NOV_XENLA (P51609) Protein NOV homolog precursor (Xnov)| Length = 343 Score = 33.5 bits (75), Expect = 0.44 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Frame = +1 Query: 232 VAQRRCPTWSPRCPFHPPSCLTSAA----SCGC 318 VA ++CP+ +CP PPSC S CGC Sbjct: 16 VASQKCPSQCDQCPEEPPSCAPSVLLILDGCGC 48
>PUR6_CANGA (O74197) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 570 Score = 33.1 bits (74), Expect = 0.57 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +3 Query: 66 IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245 + +A +Q VP E ++ +R + Y AV GI I GGAA Sbjct: 416 VMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASE------AVSRGIKVIIAGAGGAAH 469 Query: 246 LPDLVAALSLPP 281 LP +VAA++ P Sbjct: 470 LPGMVAAMTPVP 481
>PUR6_SYNY3 (Q55498) Phosphoribosylaminoimidazole carboxylase catalytic subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 176 Score = 33.1 bits (74), Expect = 0.57 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +3 Query: 72 AAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLP 251 AA ++ AVPTE ++ R Y T A + G+ I GGAA LP Sbjct: 22 AAAIAVCEEFAVPTEVAIISAHRTPERMVEYAQT------AHQRGLRIIIAGAGGAAHLP 75 Query: 252 DLVAALS-LPPAKLP 293 +VAAL+ LP +P Sbjct: 76 GMVAALTPLPVIGVP 90
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -2 Query: 200 LDGALECHGGHVVETVAPKVRLPLQKLRLCGDGQLLSLGRHCCL 69 L G LE GG V T A LP Q+ + +L +LG CL Sbjct: 51 LQGCLEAQGGQVRVTPACNTSLPAQRWKWVSRNRLFNLGTMQCL 94
>POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3 Length = 2410 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 200 LDGALECHGGHVVETVAPKVRLPLQKLRLCGD 105 +D A CH G ++ T+A + P QK+ LCGD Sbjct: 784 IDEAFSCHAGTLLATIA--IVRPKQKVVLCGD 813
>PUR6_CANAL (Q92210) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 568 Score = 30.4 bits (67), Expect = 3.7 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +3 Query: 66 IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245 + A A +Q VP E ++ R S Y + A K G+ I GGAA Sbjct: 411 VMAVGARILKQFGVPFELTIVSAHRTPHRMSEYAIE------APKRGLKCIIAGAGGAAH 464 Query: 246 LPDLVAALS-LPPAKLP 293 LP +VAA++ LP +P Sbjct: 465 LPGMVAAMTPLPVIGVP 481
>K1C12_HUMAN (Q99456) Keratin, type I cytoskeletal 12 (Cytokeratin-12) (CK-12)| (Keratin-12) (K12) Length = 494 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = +3 Query: 75 AMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPD 254 A +Q QQL EA+LLQ +AD R ++ + + + ++L I T L G A Sbjct: 382 AQLSQVQQLISNLEAQLLQVRADAERQNVDHQRLLNVKARLELEIETYRRLLDGEAQGDG 441 Query: 255 LVAALSLPPAK 287 L +L + +K Sbjct: 442 LEESLFVTDSK 452
>ATG4A_PONPY (Q5R699) Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related| protein 4 homolog A) Length = 398 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 124 SSASVGTAS-C*AWVAIAALITLPLGSSYVRSFYGDSLKQC 5 S+ S GT++ C AW + ++ L LG + + Y D+ K+C Sbjct: 207 SNLSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKEC 247
>ATG4A_HUMAN (Q8WYN0) Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related| protein 4 homolog A) (hAPG4A) (Autophagin-2) (Autophagy-related cysteine endopeptidase 2) (AUT-like 2 cysteine endopeptidase) Length = 398 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 124 SSASVGTAS-C*AWVAIAALITLPLGSSYVRSFYGDSLKQC 5 S+ S GT++ C AW + ++ L LG + + Y D+ K+C Sbjct: 207 SNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKEC 247
>POF2_SCHPO (O74783) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) (F-box protein pof2) Length = 463 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +3 Query: 120 ELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL-VAALSLPPAKLPY 296 +L Q L Y +T + QC +K T GG L D+ V+A+ AKLPY Sbjct: 300 KLSQSLTTLHLGHCYEITDIGVQCLLKSCKNITYIDFGGCLRLSDIAVSAI----AKLPY 355 Query: 297 LRRI 308 L+R+ Sbjct: 356 LQRV 359
>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)| Length = 608 Score = 29.6 bits (65), Expect = 6.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 241 RRCPTWSPRCPFHPPSCLTSAASCGC 318 +RC + SP C FHP S TS + C Sbjct: 60 QRCASTSPSCEFHPRSSSTSRNTYSC 85
>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor| Length = 297 Score = 29.6 bits (65), Expect = 6.3 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +1 Query: 244 RCPTWSPRCPFHPPSCLTSAASC 312 RC T +P+C PP+C T +C Sbjct: 58 RCETTTPKCETTPPTCRTEPPTC 80 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +1 Query: 244 RCPTWSPRCPFHPPSCLTSAASC 312 RC T PRC PP C T+ C Sbjct: 44 RCETEPPRCETEPPRCETTTPKC 66
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = +3 Query: 216 TIHSLGG----AASLPDLVAALSLPPAKLP 293 +I LGG AASLP LV LPPA LP Sbjct: 1369 SIRPLGGLDSPAASLPSLVEPPGLPPASLP 1398 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,954,258 Number of Sequences: 219361 Number of extensions: 1293547 Number of successful extensions: 4730 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4727 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
