ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart39d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLPB_TREDE (Q73K92) Chaperone clpB 32 1.6
2PEPT_VIBCH (Q9KMY6) Peptidase T (EC 3.4.11.4) (Tripeptide aminop... 31 2.7

>CLPB_TREDE (Q73K92) Chaperone clpB|
          Length = 859

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -1

Query: 550 SGDVSTRYTPPASTGSGLVRAVTASFTTDWMSILDSDAPRDIRTSHFSCPSATTADTLAV 371
           S D S    P  + G   +RA+ A+   ++   ++ DA  + R     CP  T  DT+A+
Sbjct: 292 SMDASNLLKPALARGE--LRAIGATTLNEYRKYIEKDAALERRFQQVYCPEPTVEDTIAI 349

Query: 370 V 368
           +
Sbjct: 350 L 350



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>PEPT_VIBCH (Q9KMY6) Peptidase T (EC 3.4.11.4) (Tripeptide aminopeptidase)|
           (Aminotripeptidase) (Tripeptidase)
          Length = 410

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = -1

Query: 547 GDVSTRYTPPASTGSGLVRAVTASFTTDWMSILDSDAPRDIRTSHFSCPSAT 392
           GD+S  +TP    G G      A F   W   +D     ++   +F+  +AT
Sbjct: 164 GDISIAFTPDEEIGRGANHFDVAKFAAQWAYTIDGGPIGELEYENFNAATAT 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,070,244
Number of Sequences: 219361
Number of extensions: 655801
Number of successful extensions: 2283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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