ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550213.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 365 bits (184), Expect = 1e-97 Identities = 333/382 (87%), Gaps = 3/382 (0%) Strand = Plus / Plus Query: 192 acgacgaacatcacgggggtgctggccaaggccgggcagttcaacacgttcatccggctg 251 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct: 154 acgacgaacatcacgggggtgctcgccaaggccgggcagttcaacacgctcatcaggctg 213 Query: 252 ctcaagtcgacgggcgtggcggcgcagatcgacaaccagctcaacaacagcttcgggagc 311 | ||| || |||| ||||| |||||||||||||||||| |||| ||| | | | Sbjct: 214 atgcggtccaccggcgcggcggagcagatcgacaaccagctgaaca---gctcgcgcaac 270 Query: 312 ggcatgacggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctc 371 || |||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||| Sbjct: 271 gggctgacggtgttcgcgccgacggacaacgcgttcacgtcgctcccctccggcacgctc 330 Query: 372 aactcgctgtcggacagccagaagaacgcgctgatccagtaccacgtcctctccaccgcc 431 ||||||||||| ||| ||||||||| ||||| | ||||||||||| || ||||| Sbjct: 331 aactcgctgtccgaccagcagaagaactcgctggtgcagtaccacgtgctgtccacgctg 390 Query: 432 atccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagc 491 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 391 atccccatgtcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcagcaac 450 Query: 492 tcgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccacc 551 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| ||||| Sbjct: 451 tcgccggggcagtacccgctcaacgtgacggcggaggggcagcaggtgaacatctccacc 510 Query: 552 ggggtcgtcaacgccaccgtcg 573 || ||||||||||||||||||| Sbjct: 511 ggcgtcgtcaacgccaccgtcg 532 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 94 tgtccgtggcgatcgcggcgtcggcgcagggccccgcggtggcgcccgcggcgcc 148 ||||| |||| |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 38 tgtccatggccatcgcggcgtcggctcagggcccgacggcggcgccggccgcgcc 92
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 365 bits (184), Expect = 1e-97 Identities = 333/382 (87%), Gaps = 3/382 (0%) Strand = Plus / Minus Query: 192 acgacgaacatcacgggggtgctggccaaggccgggcagttcaacacgttcatccggctg 251 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct: 3097249 acgacgaacatcacgggggtgctcgccaaggccgggcagttcaacacgctcatcaggctg 3097190 Query: 252 ctcaagtcgacgggcgtggcggcgcagatcgacaaccagctcaacaacagcttcgggagc 311 | ||| || |||| ||||| |||||||||||||||||| |||| ||| | | | Sbjct: 3097189 atgcggtccaccggcgcggcggagcagatcgacaaccagctgaaca---gctcgcgcaac 3097133 Query: 312 ggcatgacggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctc 371 || |||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||| Sbjct: 3097132 gggctgacggtgttcgcgccgacggacaacgcgttcacgtcgctcccctccggcacgctc 3097073 Query: 372 aactcgctgtcggacagccagaagaacgcgctgatccagtaccacgtcctctccaccgcc 431 ||||||||||| ||| ||||||||| ||||| | ||||||||||| || ||||| Sbjct: 3097072 aactcgctgtccgaccagcagaagaactcgctggtgcagtaccacgtgctgtccacgctg 3097013 Query: 432 atccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagc 491 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 3097012 atccccatgtcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcagcaac 3096953 Query: 492 tcgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccacc 551 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| ||||| Sbjct: 3096952 tcgccggggcagtacccgctcaacgtgacggcggaggggcagcaggtgaacatctccacc 3096893 Query: 552 ggggtcgtcaacgccaccgtcg 573 || ||||||||||||||||||| Sbjct: 3096892 ggcgtcgtcaacgccaccgtcg 3096871 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 94 tgtccgtggcgatcgcggcgtcggcgcagggccccgcggtggcgcccgcggcgcc 148 ||||| |||| |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 3097365 tgtccatggccatcgcggcgtcggctcagggcccgacggcggcgccggccgcgcc 3097311 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 gtgttcgcgcccacggacaacgccttca 348 ||||||||||| || ||||||||||||| Sbjct: 27334921 gtgttcgcgcctaccgacaacgccttca 27334894
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 365 bits (184), Expect = 1e-97 Identities = 333/382 (87%), Gaps = 3/382 (0%) Strand = Plus / Minus Query: 192 acgacgaacatcacgggggtgctggccaaggccgggcagttcaacacgttcatccggctg 251 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct: 41037 acgacgaacatcacgggggtgctcgccaaggccgggcagttcaacacgctcatcaggctg 40978 Query: 252 ctcaagtcgacgggcgtggcggcgcagatcgacaaccagctcaacaacagcttcgggagc 311 | ||| || |||| ||||| |||||||||||||||||| |||| ||| | | | Sbjct: 40977 atgcggtccaccggcgcggcggagcagatcgacaaccagctgaaca---gctcgcgcaac 40921 Query: 312 ggcatgacggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctc 371 || |||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||| Sbjct: 40920 gggctgacggtgttcgcgccgacggacaacgcgttcacgtcgctcccctccggcacgctc 40861 Query: 372 aactcgctgtcggacagccagaagaacgcgctgatccagtaccacgtcctctccaccgcc 431 ||||||||||| ||| ||||||||| ||||| | ||||||||||| || ||||| Sbjct: 40860 aactcgctgtccgaccagcagaagaactcgctggtgcagtaccacgtgctgtccacgctg 40801 Query: 432 atccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagc 491 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 40800 atccccatgtcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcagcaac 40741 Query: 492 tcgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccacc 551 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| ||||| Sbjct: 40740 tcgccggggcagtacccgctcaacgtgacggcggaggggcagcaggtgaacatctccacc 40681 Query: 552 ggggtcgtcaacgccaccgtcg 573 || ||||||||||||||||||| Sbjct: 40680 ggcgtcgtcaacgccaccgtcg 40659 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 94 tgtccgtggcgatcgcggcgtcggcgcagggccccgcggtggcgcccgcggcgcc 148 ||||| |||| |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 41153 tgtccatggccatcgcggcgtcggctcagggcccgacggcggcgccggccgcgcc 41099
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 365 bits (184), Expect = 1e-97 Identities = 333/382 (87%), Gaps = 3/382 (0%) Strand = Plus / Minus Query: 192 acgacgaacatcacgggggtgctggccaaggccgggcagttcaacacgttcatccggctg 251 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct: 65289 acgacgaacatcacgggggtgctcgccaaggccgggcagttcaacacgctcatcaggctg 65230 Query: 252 ctcaagtcgacgggcgtggcggcgcagatcgacaaccagctcaacaacagcttcgggagc 311 | ||| || |||| ||||| |||||||||||||||||| |||| ||| | | | Sbjct: 65229 atgcggtccaccggcgcggcggagcagatcgacaaccagctgaaca---gctcgcgcaac 65173 Query: 312 ggcatgacggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctc 371 || |||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||| Sbjct: 65172 gggctgacggtgttcgcgccgacggacaacgcgttcacgtcgctcccctccggcacgctc 65113 Query: 372 aactcgctgtcggacagccagaagaacgcgctgatccagtaccacgtcctctccaccgcc 431 ||||||||||| ||| ||||||||| ||||| | ||||||||||| || ||||| Sbjct: 65112 aactcgctgtccgaccagcagaagaactcgctggtgcagtaccacgtgctgtccacgctg 65053 Query: 432 atccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagc 491 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 65052 atccccatgtcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcagcaac 64993 Query: 492 tcgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccacc 551 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| ||||| Sbjct: 64992 tcgccggggcagtacccgctcaacgtgacggcggaggggcagcaggtgaacatctccacc 64933 Query: 552 ggggtcgtcaacgccaccgtcg 573 || ||||||||||||||||||| Sbjct: 64932 ggcgtcgtcaacgccaccgtcg 64911 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 94 tgtccgtggcgatcgcggcgtcggcgcagggccccgcggtggcgcccgcggcgcc 148 ||||| |||| |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 65405 tgtccatggccatcgcggcgtcggctcagggcccgacggcggcgccggccgcgcc 65351
>dbj|AK108308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F08, full insert sequence Length = 746 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 316 tgacggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctcaact 375 |||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||||| Sbjct: 33 tgacggtgttcgcgccgacggacaacgcgttcacgtcgctcccctccggcacgctcaact 92 Query: 376 cgctgtcggacagccagaagaacgcgctgatccagtaccacgtcctctccaccgccatcc 435 ||||||| ||| ||||||||| ||||| | ||||||||||| || ||||| |||| Sbjct: 93 cgctgtccgaccagcagaagaactcgctggtgcagtaccacgtgctgtccacgctgatcc 152 Query: 436 ccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagctcgc 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 153 ccatgtcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcagcaactcgc 212 Query: 496 cgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccaccgggg 555 |||| ||||||||||||||||| || || ||||| |||||||| |||||| ||||||| | Sbjct: 213 cggggcagtacccgctcaacgtgacggcggaggggcagcaggtgaacatctccaccggcg 272 Query: 556 tcgtcaacgccaccgtcg 573 |||||||||||||||||| Sbjct: 273 tcgtcaacgccaccgtcg 290
>ref|XM_475645.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 433 tccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagct 492 |||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | Sbjct: 368 tccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccg 427 Query: 493 cgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccaccg 552 | | ||| ||||||||||||||||||||||||||||| | || |||||| |||||| Sbjct: 428 ccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccg 487 Query: 553 gggtcgtcaacgccaccgtcgac 575 | ||||||||||||||||||||| Sbjct: 488 gcgtcgtcaacgccaccgtcgac 510
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 433 tccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagct 492 |||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | Sbjct: 78413 tccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccg 78354 Query: 493 cgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccaccg 552 | | ||| ||||||||||||||||||||||||||||| | || |||||| |||||| Sbjct: 78353 ccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccg 78294 Query: 553 gggtcgtcaacgccaccgtcgac 575 | ||||||||||||||||||||| Sbjct: 78293 gcgtcgtcaacgccaccgtcgac 78271
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 433 tccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagct 492 |||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | Sbjct: 3656066 tccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccg 3656007 Query: 493 cgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccaccg 552 | | ||| ||||||||||||||||||||||||||||| | || |||||| |||||| Sbjct: 3656006 ccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccg 3655947 Query: 553 gggtcgtcaacgccaccgtcgac 575 | ||||||||||||||||||||| Sbjct: 3655946 gcgtcgtcaacgccaccgtcgac 3655924 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggcacgctcaactcgctgtcg 383 ||||||||||||||||||||| Sbjct: 27831814 ggcacgctcaactcgctgtcg 27831834 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 cggcatgacggtgttcgcgcccacggacaacgccttc 347 |||||| ||||||||||| ||||| ||| |||||||| Sbjct: 22442843 cggcatcacggtgttcgcccccaccgacgacgccttc 22442879 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 ccggcacgctcaactcgctgtcgg 384 |||||||||||||||| ||||||| Sbjct: 27827345 ccggcacgctcaactccctgtcgg 27827368
>dbj|AK105598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A03, full insert sequence Length = 1114 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 433 tccccatgtcgcagttcgacaccgtgagcaacccgctccggacgcaggccggcagcagct 492 |||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | Sbjct: 431 tccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccg 490 Query: 493 cgccgggccagtacccgctcaacgtcaccgccgagggccagcaggtcaacatcaccaccg 552 | | ||| ||||||||||||||||||||||||||||| | || |||||| |||||| Sbjct: 491 ccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccg 550 Query: 553 gggtcgtcaacgccaccgtcgac 575 | ||||||||||||||||||||| Sbjct: 551 gcgtcgtcaacgccaccgtcgac 573
>gb|BT016499.1| Zea mays clone Contig332 mRNA sequence Length = 1156 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 318 acggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctcaactcg 377 ||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||| Sbjct: 337 acggtgttcgcgcccaccgacaacgccttcaacaacctcaagcccggcacgctcaactcg 396 Query: 378 ctg 380 ||| Sbjct: 397 ctg 399
>gb|AY107515.1| Zea mays PCO145505 mRNA sequence Length = 883 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 318 acggtgttcgcgcccacggacaacgccttcacctcgctcgcctccggcacgctcaactcg 377 ||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||| Sbjct: 327 acggtgttcgcgcccaccgacaacgccttcaacaacctcaagcccggcacgctcaactcg 386 Query: 378 ctg 380 ||| Sbjct: 387 ctg 389
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 182 ggcggccggcacgacgaacatcacgggggtgctggccaaggccgggcagttcaacacgtt 241 |||||||| | || ||||| | |||| |||||||| ||||||||||||| || || ||| Sbjct: 188 ggcggccgccgcgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagtt 247 Query: 242 catccggctg 251 |||||||||| Sbjct: 248 catccggctg 257 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 318 acggtgttcgcgcccacggacaacgccttca 348 ||||||||||| ||||| ||||||||||||| Sbjct: 321 acggtgttcgcccccaccgacaacgccttca 351
>gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis, full insert mRNA sequence Length = 1013 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 321 gtgttcgcgcccacggacaacgccttca 348 |||||||||||||| ||||||||||||| Sbjct: 307 gtgttcgcgcccaccgacaacgccttca 334
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 cgatcgcggcgtcggcgcagggccccgcggtggcgc 138 ||||| |||||||||||| ||||| ||||||||||| Sbjct: 4562905 cgatctcggcgtcggcgccgggccgcgcggtggcgc 4562870
>gb|AC151752.1| Ornithorhynchus anatinus chromosome UNK clone OABb-503A1, complete sequence Length = 132108 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ccccggcggcgcccgctccggcg 185 ||||||||||||||||||||||| Sbjct: 57179 ccccggcggcgcccgctccggcg 57157
>ref|XM_507474.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 180 aaggccgggcactacaacaccttcgtccggctgctcaag 218
>ref|XM_506786.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 180 aaggccgggcactacaacaccttcgtccggctgctcaag 218
>ref|XM_465181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 177 aaggccgggcactacaacaccttcgtccggctgctcaag 215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 12128150 aaggccgggcactacaacaccttcgtccggctgctcaag 12128112 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ccggcggcgcccgctccggcggccg 189 |||||||||||||| |||||||||| Sbjct: 27455672 ccggcggcgcccgcgccggcggccg 27455696
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 76455 aaggccgggcactacaacaccttcgtccggctgctcaag 76417
>dbj|AK104533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D08, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 180 aaggccgggcactacaacaccttcgtccggctgctcaag 218
>dbj|AK104098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D11, full insert sequence Length = 1079 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 177 aaggccgggcactacaacaccttcgtccggctgctcaag 215
>dbj|AK060903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E01, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 219 aaggccgggcagttcaacacgttcatccggctgctcaag 257 ||||||||||| | |||||| ||| |||||||||||||| Sbjct: 180 aaggccgggcactacaacaccttcgtccggctgctcaag 218
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 gcggcgcccgctccggcggccg 189 |||||||||||||||||||||| Sbjct: 38568 gcggcgcccgctccggcggccg 38589
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 520575 ggcgcccgcggcgcccacgacg 520596
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 447756 ggcgcccgcggcgcccacgacg 447777 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acgccttcacctcgctcgcctccg 363 ||||| |||||||||||||||||| Sbjct: 1736921 acgccatcacctcgctcgcctccg 1736898
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 447756 ggcgcccgcggcgcccacgacg 447777 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acgccttcacctcgctcgcctccg 363 ||||| |||||||||||||||||| Sbjct: 1734642 acgccatcacctcgctcgcctccg 1734619
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 520575 ggcgcccgcggcgcccacgacg 520596
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 155074 ggcgcccgcggcgcccacgacg 155095
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 122556 ggcgcccgcggcgcccacgacg 122535
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ggcgcccgcggcgcccacgacg 155 |||||||||||||||||||||| Sbjct: 26197 ggcgcccgcggcgcccacgacg 26176
>gb|AY752465.1|AY752465S1 Pinus taeda isolate 27 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752463.1|AY752463S1 Pinus taeda isolate 29 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752461.1|AY752461S1 Pinus taeda isolate 1 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752459.1|AY752459S1 Pinus taeda isolate 17 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752457.1|AY752457S1 Pinus taeda isolate 8 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752455.1|AY752455S1 Pinus taeda isolate 28 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752453.1|AY752453S1 Pinus taeda isolate 19 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752451.1|AY752451S1 Pinus taeda isolate 3 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752449.1|AY752449S1 Pinus taeda isolate 2 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752447.1|AY752447S1 Pinus taeda isolate 10 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752445.1|AY752445S1 Pinus taeda isolate 14 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752443.1|AY752443S1 Pinus taeda isolate 30 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752441.1|AY752441S1 Pinus taeda isolate 13 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752439.1|AY752439S1 Pinus taeda isolate 25 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752437.1|AY752437S1 Pinus taeda isolate 7 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752435.1|AY752435S1 Pinus taeda isolate 11 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752433.1|AY752433S1 Pinus taeda isolate 24 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752431.1|AY752431S1 Pinus taeda isolate 12 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752429.1|AY752429S1 Pinus taeda isolate 20 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752427.1|AY752427S1 Pinus taeda isolate 15 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752425.1|AY752425S1 Pinus taeda isolate 5 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752423.1|AY752423S1 Pinus taeda isolate 31 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752421.1|AY752421S1 Pinus taeda isolate 21 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752419.1|AY752419S1 Pinus taeda isolate 18 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752417.1|AY752417S1 Pinus taeda isolate 32 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752415.1|AY752415S1 Pinus taeda isolate 22 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752413.1|AY752413S1 Pinus taeda isolate 23 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752411.1|AY752411S1 Pinus taeda isolate 9 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752409.1|AY752409S1 Pinus taeda isolate 26 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752407.1|AY752407S1 Pinus taeda isolate 4 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752405.1|AY752405S1 Pinus taeda isolate 6 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AY752403.1|AY752403S1 Pinus taeda isolate 16 arabinogalactan-like protein gene, exon Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 177 caaggccgggcagttcaacac 197
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggcacgctcaactcgctgtcg 383 ||||||||||||||||||||| Sbjct: 62231 ggcacgctcaactcgctgtcg 62251 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 ccggcacgctcaactcgctgtcgg 384 |||||||||||||||| ||||||| Sbjct: 57762 ccggcacgctcaactccctgtcgg 57785
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 cggcatgacggtgttcgcgcccacggacaacgccttc 347 |||||| ||||||||||| ||||| ||| |||||||| Sbjct: 32250 cggcatcacggtgttcgcccccaccgacgacgccttc 32286
>ref|XM_849749.1| PREDICTED: Canis familiaris similar to Lactosylceramide alpha-2,3-sialyltransferase (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase) (Ganglioside GM3 synthase) (ST3Gal V) (Sialyltransferase 9) (LOC612022), mRNA Length = 2082 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 catggcagccatgcagagatt 82 ||||||||||||||||||||| Sbjct: 1065 catggcagccatgcagagatt 1045
>emb|AJ585768.1| Bos taurus mRNA for alpha2,3-sialyltransferase (st3Gal-V gene) Length = 1436 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 catggcagccatgcagagatt 82 ||||||||||||||||||||| Sbjct: 1109 catggcagccatgcagagatt 1089
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gccccgcggtggcgcccgcgg 144 ||||||||||||||||||||| Sbjct: 257990 gccccgcggtggcgcccgcgg 257970
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 152 gacgcccacgaccccggcggcgccc 176 ||||||| ||||||||||||||||| Sbjct: 37598 gacgcccgcgaccccggcggcgccc 37574
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 cgggggtgctggccaaggccg 225 ||||||||||||||||||||| Sbjct: 4222134 cgggggtgctggccaaggccg 4222114
>ref|NM_205807.1| Bos taurus alpha2,3-sialyltransferase (ST3GAL-V), mRNA Length = 1436 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 catggcagccatgcagagatt 82 ||||||||||||||||||||| Sbjct: 1109 catggcagccatgcagagatt 1089
>gb|AF182515.2|AF182515 Pseudomonas putida clone mus20 outer membrane-like protein gene, partial cds Length = 8516 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gcggcgcagatcgacaaccag 290 ||||||||||||||||||||| Sbjct: 6096 gcggcgcagatcgacaaccag 6116
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ccggcggcgcccgctccggcggccg 189 |||||||||||||| |||||||||| Sbjct: 47394 ccggcggcgcccgcgccggcggccg 47418
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ccggcggcgcccgctccggcggccg 189 |||||||||||||| |||||||||| Sbjct: 284 ccggcggcgcccgcgccggcggccg 260
>dbj|AK099313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144L21, full insert sequence Length = 1147 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggcacgctcaactcgctgtcg 383 ||||||||||||||||||||| Sbjct: 377 ggcacgctcaactcgctgtcg 397
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 ctggccaaggccgggcagttc 233 ||||||||||||||||||||| Sbjct: 5028944 ctggccaaggccgggcagttc 5028964
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 cgcggtggcgcccgcggcgcccacg 152 ||||| ||||||||||||||||||| Sbjct: 1616668 cgcggcggcgcccgcggcgcccacg 1616692
>dbj|AK058836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C09, full insert sequence Length = 1102 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggcacgctcaactcgctgtcg 383 ||||||||||||||||||||| Sbjct: 383 ggcacgctcaactcgctgtcg 403
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 gcggcgcagatcgacaaccag 290 ||||||||||||||||||||| Sbjct: 929107 gcggcgcagatcgacaaccag 929087
>gb|U09556.1|PTU09556 Pinus taeda clone p14A9 arabinogalactan-like protein mRNA, complete cds Length = 1242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 caaggccgggcagttcaacac 238 ||||||||||||||||||||| Sbjct: 279 caaggccgggcagttcaacac 299
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ccggcggcgcccgctccggcggccg 189 |||||||||||||| |||||||||| Sbjct: 412 ccggcggcgcccgcgccggcggccg 388
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acgccttcacctcgctcgcctccg 363 ||||| |||||||||||||||||| Sbjct: 91928 acgccatcacctcgctcgcctccg 91905
>ref|NM_191933.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 gtgttcgcgcccacggacaacgccttca 348 ||||||||||| || ||||||||||||| Sbjct: 235 gtgttcgcgcctaccgacaacgccttca 262
>ref|NM_186090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ccgctccggcggccggcacgacga 198 ||||||||||||||| |||||||| Sbjct: 552 ccgctccggcggccgccacgacga 575
>gb|AF177423.2| Crucihimalya lasiocarpa clone 115.7.01 ribosomal RNA intergenic region and external transcribed spacer region, complete sequence Length = 4473 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 gcccacggacaacgccttcacctcgctc 356 |||||||| |||| |||||||||||||| Sbjct: 3440 gcccacggccaacaccttcacctcgctc 3413
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ccggcggcgcccgctccggcggccggca 192 ||||||||||||||||| ||| |||||| Sbjct: 2453796 ccggcggcgcccgctcccgcgcccggca 2453769
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgaccccggcggcgcccgct 179 |||||||||||||||||||| Sbjct: 1786984 cgaccccggcggcgcccgct 1787003 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cggtggcgcccgcggcgccc 149 |||||||||||||||||||| Sbjct: 820297 cggtggcgcccgcggcgccc 820316 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcgatcgcggcgtcggcgc 120 |||||||||||||||||||| Sbjct: 238164 ggcgatcgcggcgtcggcgc 238183
>gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, complete sequence Length = 209731 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ggcgcccgctccggcggccg 189 |||||||||||||||||||| Sbjct: 209058 ggcgcccgctccggcggccg 209077
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 466 cgctccggacgcaggccggcagcagctcgccg 497 |||||| | ||| ||||||||||||||||||| Sbjct: 1797058 cgctccagtcgccggccggcagcagctcgccg 1797089
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 165 ccggcggcgcccgctccggcggccggca 192 ||||||||||||||||| ||| |||||| Sbjct: 3730813 ccggcggcgcccgctcccgcgcccggca 3730840
>ref|NM_004717.2| Homo sapiens diacylglycerol kinase, iota (DGKI), mRNA Length = 4780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ggcgcccgctccggcggccg 189 |||||||||||||||||||| Sbjct: 157 ggcgcccgctccggcggccg 138
>ref|XM_754388.1| Ustilago maydis 521 hypothetical protein (UM03334.1) partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cggacaacgccttcacctcg 353 |||||||||||||||||||| Sbjct: 89 cggacaacgccttcacctcg 108
>ref|XM_381711.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01535.1) partial mRNA Length = 2226 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 acaaccagctcaacaacagcttcg 306 ||||||||| |||||||||||||| Sbjct: 647 acaaccagcgcaacaacagcttcg 670
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccccggcggcgcccgctccg 182 |||||||||||||||||||| Sbjct: 126087 ccccggcggcgcccgctccg 126068
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggcgcccacgacgcccac 160 |||||||||||||||||||| Sbjct: 63083 gcggcgcccacgacgcccac 63102
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ccggcggcgcccgctccggcggcc 188 |||||||||||||| ||||||||| Sbjct: 55779 ccggcggcgcccgcgccggcggcc 55756
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ggtgctggccaaggccgggc 228 |||||||||||||||||||| Sbjct: 131436 ggtgctggccaaggccgggc 131417
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 466 cgctccggacgcaggccggcagcagctcgccg 497 |||||| | ||| ||||||||||||||||||| Sbjct: 3131049 cgctccagtcgccggccggcagcagctcgccg 3131080
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 165 ccggcggcgcccgctccggcggccggca 192 ||||||||||||||||| ||| |||||| Sbjct: 3471132 ccggcggcgcccgctcccgcgcccggca 3471159
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 caccgccgagggccagcagg 537 |||||||||||||||||||| Sbjct: 144569 caccgccgagggccagcagg 144588
>emb|AJ507836.1|ANI507836 Arthrobacter nicotinovorans pAO1 plasmid sequence Length = 165137 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 cgccgggccagtacccgctc 512 |||||||||||||||||||| Sbjct: 50787 cgccgggccagtacccgctc 50806
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 gcgtcggcgcagggccccgcggtg 134 ||||||||||||||| |||||||| Sbjct: 5389804 gcgtcggcgcagggcgccgcggtg 5389781
>gb|AE012350.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 258 of 460 of the complete genome Length = 12191 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ggtgctggccaaggccgggc 228 |||||||||||||||||||| Sbjct: 3436 ggtgctggccaaggccgggc 3417
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 cgcccacgaccccggcggcgcccgctccggcg 185 ||||| || ||||| ||||||||||||||||| Sbjct: 3253796 cgccctcggccccgccggcgcccgctccggcg 3253827
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ggtgctggccaaggccgggc 228 |||||||||||||||||||| Sbjct: 2065453 ggtgctggccaaggccgggc 2065472
>gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e In DGCR Region, complete sequence Length = 44426 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ggccaaggccgggcagttca 234 |||||||||||||||||||| Sbjct: 8001 ggccaaggccgggcagttca 8020
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 466 cgctccggacgcaggccggcagcagctcgccg 497 |||||| | ||| ||||||||||||||||||| Sbjct: 2282904 cgctccagtcgccggccggcagcagctcgccg 2282935
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ccgctccggcggccggcacgacga 198 ||||||||||||||| |||||||| Sbjct: 28127369 ccgctccggcggccgccacgacga 28127346
>gb|AC022173.7|AC022173 Homo sapiens chromosome 7 clone RP11-29B3, complete sequence Length = 155136 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ggcgcccgctccggcggccg 189 |||||||||||||||||||| Sbjct: 123590 ggcgcccgctccggcggccg 123571
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gatcgcggcgtcggcgcagg 123 |||||||||||||||||||| Sbjct: 2835582 gatcgcggcgtcggcgcagg 2835563 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gcggcgcccgctccggcggccggc 191 ||||||||||| |||||||||||| Sbjct: 918061 gcggcgcccgcgccggcggccggc 918038
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 gtgttcgcgcccacggacaacgccttca 348 ||||||||||| || ||||||||||||| Sbjct: 17816 gtgttcgcgcctaccgacaacgccttca 17789
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 gtgttcgcgcccacggacaacgccttca 348 ||||||||||| || ||||||||||||| Sbjct: 115438 gtgttcgcgcctaccgacaacgccttca 115411
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 530 ccagcaggtcaacatcaccaccggggtc 557 |||| |||||||||||| |||||||||| Sbjct: 101626 ccagaaggtcaacatcagcaccggggtc 101653
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ccgctccggcggccggcacgacga 198 ||||||||||||||| |||||||| Sbjct: 110665 ccgctccggcggccgccacgacga 110642
>dbj|AK121066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060D18, full insert sequence Length = 3413 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acgccttcacctcgctcgcctccg 363 ||||| |||||||||||||||||| Sbjct: 218 acgccatcacctcgctcgcctccg 241
>ref|XM_321040.2| Anopheles gambiae str. PEST ENSANGP00000022463 (ENSANGG00000021069), partial mRNA Length = 13977 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gcagatcgacaaccagctca 294 |||||||||||||||||||| Sbjct: 1947 gcagatcgacaaccagctca 1966
>dbj|AK105603.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A09, full insert sequence Length = 1040 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 gtgttcgcgcccacggacaacgccttca 348 ||||||||||| || ||||||||||||| Sbjct: 288 gtgttcgcgcctaccgacaacgccttca 315
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaactcgctgtcggacagc 389 |||||||||||||||||||| Sbjct: 3218487 tcaactcgctgtcggacagc 3218468
>dbj|AK065453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D11, full insert sequence Length = 3286 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acgccttcacctcgctcgcctccg 363 ||||| |||||||||||||||||| Sbjct: 180 acgccatcacctcgctcgcctccg 203
>gb|AF061936.1|AF061936 Homo sapiens diacylglycerol kinase iota (DGKi) mRNA, complete cds Length = 5092 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ggcgcccgctccggcggccg 189 |||||||||||||||||||| Sbjct: 462 ggcgcccgctccggcggccg 443
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tacacgccatggcagccatgcaga 78 |||| ||||||||||||||||||| Sbjct: 67037 tacatgccatggcagccatgcaga 67060
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tcgacaaccagctcaacaacagct 303 ||||||||||||||||| |||||| Sbjct: 543 tcgacaaccagctcaacgacagct 566 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,194,891 Number of Sequences: 3902068 Number of extensions: 3194891 Number of successful extensions: 74761 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70751 Number of HSP's gapped (non-prelim): 3997 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
