ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39c12 |
|---|---|
| Clone Library Name | barley_pub |
>PSD4_ARATH (P55034) 26S proteasome non-ATPase regulatory subunit 4 (26S| proteasome regulatory subunit S5A) (Multiubiquitin chain-binding protein) Length = 386 Score = 273 bits (697), Expect = 4e-73 Identities = 133/182 (73%), Positives = 152/182 (83%), Gaps = 1/182 (0%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLE+TMICIDNSEWMRNGDYSPSR QAQ +AVNL+CGAKTQSNPENTVG +TMAGKGVR Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL TPTSDLGKILACMHGL+VG KHRQNK Q+QRIIVF GSP+KY Sbjct: 61 VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDD-EKPEKLEALIAAVNSSDSSHIVHVPPGDHA 601 +KK LE +GK+LKKN+V+LD+V+FGE DD EKP+KLEAL+ AVN++D SHIVHVP G +A Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180 Query: 602 LS 607 LS Sbjct: 181 LS 182
>RPN10_SCHPO (O94444) 26S proteasome regulatory subunit rpn10| Length = 243 Score = 167 bits (423), Expect = 2e-41 Identities = 87/181 (48%), Positives = 111/181 (61%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLE+TMI IDNSEWM NGDY P+RF+AQ D V++I K NPEN G MT+ + Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ 60 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T T D GK L+ MH L V KHR+NK Q+QRI+ F+GSP+ Sbjct: 61 VLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE 120 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHAL 604 D+K L + K++KKNNVA+D++ GE +E L+ I A NSSDS H+V +PP L Sbjct: 121 DEKNLIRLAKRMKKNNVAIDIIHIGELQNE--SALQHFIDAANSSDSCHLVSIPPSPQLL 178 Query: 605 S 607 S Sbjct: 179 S 179
>PSD4_MOUSE (O35226) 26S proteasome non-ATPase regulatory subunit 4 (26S| proteasome regulatory subunit S5A) (Rpn10) (Multiubiquitin chain-binding protein) Length = 376 Score = 162 bits (409), Expect = 9e-40 Identities = 84/178 (47%), Positives = 116/178 (65%), Gaps = 2/178 (1%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLESTM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG +T+A Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 59 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T T D G+IL+ +H ++ KHRQ K + RII F+GSPV+ Sbjct: 60 VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 119 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPG 592 ++K L + K+LKK V +D+++FGE ++ EKL A + +N D SH+V VPPG Sbjct: 120 NEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPG 176
>PSD4_HUMAN (P55036) 26S proteasome non-ATPase regulatory subunit 4 (26S| proteasome regulatory subunit S5A) (Rpn10) (Multiubiquitin chain-binding protein) (Antisecretory factor 1) (AF) (ASF) Length = 377 Score = 162 bits (409), Expect = 9e-40 Identities = 84/178 (47%), Positives = 116/178 (65%), Gaps = 2/178 (1%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLESTM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG +T+A Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 59 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T T D G+IL+ +H ++ KHRQ K + RII F+GSPV+ Sbjct: 60 VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 119 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPG 592 ++K L + K+LKK V +D+++FGE ++ EKL A + +N D SH+V VPPG Sbjct: 120 NEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPG 176
>RPN10_YEAST (P38886) 26S proteasome regulatory subunit RPN10| Length = 268 Score = 153 bits (386), Expect = 4e-37 Identities = 83/182 (45%), Positives = 115/182 (63%), Gaps = 2/182 (1%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLE+T++ IDNSE+ RNGD+ +RF+AQ D+V I AK SNPENTVG ++ AG R Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR 60 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T T++ GKILA +H ++ KHRQNK Q QRI+ F+ SP+ Sbjct: 61 VLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD 120 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNS--SDSSHIVHVPPGDH 598 + L + K LKKNNVA+D+++FGE ++ E L+ IAAVN+ ++SH++ V PG Sbjct: 121 SRDELIRLAKTLKKNNVAVDIINFGEI-EQNTELLDEFIAAVNNPQEETSHLLTVTPGPR 179 Query: 599 AL 604 L Sbjct: 180 LL 181
>PSD4_DROME (P55035) 26S proteasome non-ATPase regulatory subunit 4 (26S| proteasome regulatory subunit S5A) (Multiubiquitin chain-binding protein) (54 kDa subunit of mu particle) (p54) Length = 396 Score = 144 bits (363), Expect = 2e-34 Identities = 80/178 (44%), Positives = 106/178 (59%), Gaps = 2/178 (1%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 MVLESTMIC DNS++ RNGDY P+R Q D +NL+C K +SNPEN VG MT++ V Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VE 59 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T TSD G+I + MH ++ KHRQ K + RI+VF+GSP+ + Sbjct: 60 VLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINH 119 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPG 592 ++ L K+LKK V +D+V FG+ + E L A I A+N D SH+V VP G Sbjct: 120 EEGDLVKQAKRLKKEKVNVDIVSFGDHGNNN-EILTAFINALNGKDGTGSHLVSVPRG 176
>PSD4_SCHMA (O17453) 26S proteasome non-ATPase regulatory subunit 4 (26S| proteasome regulatory subunit S5A) Length = 420 Score = 139 bits (349), Expect = 8e-33 Identities = 74/178 (41%), Positives = 108/178 (60%), Gaps = 2/178 (1%) Frame = +2 Query: 65 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGAMTMAGKGVR 244 M E+T+I +DNS++MRNGD+ P+R QAQ DAV LIC +K Q NPENT+G +++A Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLA--NTE 58 Query: 245 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 424 VL T T+D+ KI +H +E +HRQ + Q+ RI+ FIGSP+ Sbjct: 59 VLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILE 118 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPG 592 D+K L + K+LKK V +D+++FGE + + +KL I +N D SH++ V PG Sbjct: 119 DEKELTRLAKRLKKEKVNVDIINFGENETNE-QKLSEFIDTLNGKDGTGSHLISVAPG 175
>GUAA_BRUME (Q8YBL2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 507 Score = 40.0 bits (92), Expect = 0.005 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Frame = +1 Query: 82 DDLHRQLGVDAERRLLAVPLPGAGRRRQ---PHLRRQDPVEPGEYGGRHDDG----RQGR 240 D++ + DA + AV LP R R PHLR + + G++GGRHD G R Sbjct: 428 DEIRKAGLYDAIWQAFAVLLPVQDRGRDGGWPHLRIRLRLARGDFGGRHDGGFLPLRHEF 487 Query: 241 ARAC-HPHQR--PRQDPR 285 R C HPH + PR PR Sbjct: 488 PRQCGHPHHQRSPRHQPR 505
>YIBA_ECOLI (P0ADK6) Protein yibA| Length = 280 Score = 35.0 bits (79), Expect = 0.17 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 368 QNKRQQQRIIVFIGSPVKYDKKVLETIGKKLKKNNVALDVVD-FGETDDE 514 Q+K ++ RI IG + DK+VL + +LKKN V D+++ GE D+ Sbjct: 202 QDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDK 251
>YIBA_ECO57 (P0ADK7) Protein yibA| Length = 280 Score = 35.0 bits (79), Expect = 0.17 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 368 QNKRQQQRIIVFIGSPVKYDKKVLETIGKKLKKNNVALDVVD-FGETDDE 514 Q+K ++ RI IG + DK+VL + +LKKN V D+++ GE D+ Sbjct: 202 QDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDK 251
>ILVH_BUCBP (Q89AP8) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)| (Acetohydroxy-acid synthase small subunit) (ALS) Length = 159 Score = 34.3 bits (77), Expect = 0.29 Identities = 18/45 (40%), Positives = 29/45 (64%) Frame = +2 Query: 425 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSS 559 DKKV+E IGK+L K +DV+ E +DE+ K E ++ +N++ Sbjct: 54 DKKVIEQIGKQLHK---LIDVLKVTEIEDEEHFKREIMLIKINNT 95
>CARB_CAUCR (Q9A4D6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -3 Query: 204 FSGFDWVLAPQMRLTASACA--WKRDGE 127 F+G D VL P+MR T WKRDGE Sbjct: 916 FAGVDTVLGPEMRSTGEVMGLDWKRDGE 943
>LWA_ANTEL (Q16992) LWamide neuropeptides precursor [Contains: LWamide I;| Metamorphosin A (LWamide II) (MMA); LWamide III; LWamide IV; LWamide V; LWamide VI; LWamide VII; LWamide VIII; LWamide IX] Length = 514 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Frame = +1 Query: 151 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQ----RPRQDPRLYAR-AGS 306 G+R+ P L R DP +PG +G R + G G R+ P Q RQ+P L+ R AGS Sbjct: 415 GKRQNPGLWGRSADPQQPGLWGKRQNPGLWG--RSADPQQPGLWGKRQNPGLWGRSAGS 471 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Frame = +1 Query: 151 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQ----RPRQDPRLYARA 300 G+R+ P L R DP +PG +G R + G G R+ P Q RQ+P L+ R+ Sbjct: 394 GKRQNPGLWGRSADPQQPGLWGKRQNPGLWG--RSADPQQPGLWGKRQNPGLWGRS 447 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Frame = +1 Query: 151 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQ----RPRQDPRLYARA 300 G+R+ P L R DP +PG +G R + G G R+ P Q RQ+P L+ R+ Sbjct: 291 GKRQNPGLWGRSADPQQPGLWGKRQNPGLWG--RSADPQQPGLWGKRQNPGLWGRS 344 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 151 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQ----RPRQDPRLYARA 300 G+R+ P R DP +PG +G R + G G R+ P Q RQ+P L+ R+ Sbjct: 373 GKRQNPGFWGRSADPQQPGLWGKRQNPGLWG--RSADPQQPGLWGKRQNPGLWGRS 426
>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556| Length = 395 Score = 30.4 bits (67), Expect = 4.2 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Frame = +1 Query: 34 RLQRDPQRRNHGARVDDDLHRQLGVDAERRLLAV-PLPGAGRRRQPHLRRQDPVEPGEYG 210 R+ P+R HG +GV A++R LAV P+P G+ RQP R P Sbjct: 179 RVVHRPRREVHGGGQQRRQAASVGVPAQQRRLAVHPVP--GQLRQPARR-----YPRHIN 231 Query: 211 GRHDD--------GRQGRARACHPHQRPRQDP 282 G H + R R HPH RP P Sbjct: 232 GAHSERGDLLRPLQRPLHLRTRHPH-RPAPQP 262
>LWA_ANESU (Q17093) LWamide neuropeptides precursor [Contains: LWamide I;| LWamide II; Metamorphosin A (MMA); IWamide] (Fragment) Length = 126 Score = 30.0 bits (66), Expect = 5.5 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 12/65 (18%) Frame = +1 Query: 151 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQR----PRQDPRLYAR----- 297 G+R+QP L R DP + G +G R + G G R+ P Q RQ P L+ R Sbjct: 21 GKRQQPGLWGRSADPQQAGLWGKRQNPGLWG--RSADPQQAGLWGKRQHPGLWGRSADPQ 78 Query: 298 -AGSW 309 AG W Sbjct: 79 QAGLW 83
>SNUT3_XENTR (Q6DDA4) U4/U6.U5 tri-snRNP-associated protein 3| Length = 156 Score = 30.0 bits (66), Expect = 5.5 Identities = 17/65 (26%), Positives = 26/65 (40%) Frame = +1 Query: 40 QRDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLRRQDPVEPGEYGGRH 219 +R+ +R +R + R+ ERR P R R P R + PG R Sbjct: 12 RRERRRSRSASRERERRRRERSRSRERRRSRSRSPHRRRSRSPRRHRSSSISPGRLKDRR 71 Query: 220 DDGRQ 234 DD ++ Sbjct: 72 DDDKK 76
>ZC11A_PONPY (Q5REG6) Zinc finger CCCH-type domain-containing protein 11A| Length = 811 Score = 30.0 bits (66), Expect = 5.5 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = +2 Query: 416 VKYDKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLE-----ALIAAVNSSDSSHIVH 580 VKY + LE GK K NV VV + P++ A+IAAV SS ++ Sbjct: 635 VKYAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEMHPAVIAAVKPLSSSSVLQ 694 Query: 581 VPPGDHA 601 PP A Sbjct: 695 EPPAKKA 701
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = +1 Query: 43 RDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLR--RQDPVEPGEYGGR 216 R + R AR + +L +AE R A A R QP R R+D P YG R Sbjct: 190 RRAKEREESARRQAEEEARLKAEAEARRKAEE-EAAKRMPQPEARSERRDDARPAPYGAR 248 Query: 217 HDDGRQGRARACHPHQRPRQ 276 + + P RP+Q Sbjct: 249 PQQAGRPQGGRPQPAGRPQQ 268
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = +1 Query: 43 RDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLR--RQDPVEPGEYGGR 216 R + R AR + +L +AE R A A R QP R R+D P YG R Sbjct: 190 RRAKEREESARRQAEEEARLKAEAEARRKAEE-EAAKRMPQPEARSERRDDARPAPYGAR 248 Query: 217 HDDGRQGRARACHPHQRPRQ 276 + + P RP+Q Sbjct: 249 PQQAGRPQGGRPQPAGRPQQ 268
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = +1 Query: 43 RDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLR--RQDPVEPGEYGGR 216 R + R AR + +L +AE R A A R QP R R+D P YG R Sbjct: 190 RRAKEREESARRQAEEEARLKAEAEARRKAEE-EAAKRMPQPEARSERRDDARPAPYGAR 248 Query: 217 HDDGRQGRARACHPHQRPRQ 276 + + P RP+Q Sbjct: 249 PQQAGRPQGGRPQPAGRPQQ 268
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 6/78 (7%) Frame = +1 Query: 52 QRRNHGARVDDDLHRQLGVDAER-----RLLAVPLPGAGRRRQPHLRRQDPVE-PGEYGG 213 Q R+H D H G+DA R + + G R H R+ +E PG + G Sbjct: 862 QARHHDRARDPSAHAAAGLDARRPWAGSQEAELSREGPYGRESDHQAREGGLEPPGFWEG 921 Query: 214 RHDDGRQGRARACHPHQR 267 + G+ G H H++ Sbjct: 922 EAERGKAGDPHRRHAHRQ 939 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,664,994 Number of Sequences: 219361 Number of extensions: 1308372 Number of successful extensions: 5791 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5778 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
