ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39c04 |
|---|---|
| Clone Library Name | barley_pub |
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 77.0 bits (188), Expect = 3e-14 Identities = 35/67 (52%), Positives = 47/67 (70%) Frame = +3 Query: 123 PQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTL 302 P F CPIS+ELM+DPV VSTG TY+R IE+W G TCP T Q++++ LTPN+ L Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIAS-GHHTCPTTQQKMSTSALTPNYVL 332 Query: 303 KRVIASW 323 + +I+ W Sbjct: 333 RSLISQW 339
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 75.9 bits (185), Expect = 7e-14 Identities = 35/67 (52%), Positives = 46/67 (68%) Frame = +3 Query: 123 PQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTL 302 P+ F CPIS+ELM+DPV VSTG TY+R SI++W G TCP + + + LTPN+ L Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKW-LDAGHKTCPKSQETLLHAGLTPNYVL 307 Query: 303 KRVIASW 323 K +IA W Sbjct: 308 KSLIALW 314
>STUB1_MOUSE (Q9WUD1) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) (Carboxy terminus of Hsp70-interacting protein) (E3 ubiquitin protein ligase CHIP) Length = 304 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 132 FLC-PISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKR 308 +LC IS ELM +P +G+TYDR+ IE + G P T + L PN +K Sbjct: 231 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAMKE 289 Query: 309 VI 314 VI Sbjct: 290 VI 291
>STUB1_HUMAN (Q9UNE7) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) (Carboxy terminus of Hsp70-interacting protein) (E3 ubiquitin protein ligase CHIP) (CLL-associated antigen KW-8) (Antigen NY-C Length = 303 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 132 FLC-PISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKR 308 +LC IS ELM +P +G+TYDR+ IE + G P T + L PN +K Sbjct: 230 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAMKE 288 Query: 309 VI 314 VI Sbjct: 289 VI 290
>STUB1_CHICK (Q5ZHY5) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) Length = 314 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 132 FLC-PISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKR 308 +LC IS ELM +P +G+TYDR+ IE + G P T + L PN +K Sbjct: 241 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLAMKE 299 Query: 309 VI 314 VI Sbjct: 300 VI 301
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 37.4 bits (85), Expect = 0.028 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = +3 Query: 135 LCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVI 314 LC + + D VT+ G + R + R + TCP R + DL NHTL ++ Sbjct: 20 LCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPADLRTNHTLNNLV 79
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 37.0 bits (84), Expect = 0.037 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +3 Query: 114 EESPQLFLCPISMELMEDPVTVSTGVTYDRRSIER-WFFKYGKTTCPATMQRVASLDLTP 290 E+ + CPI ++ +DPV++ G + R + R W G CP A L P Sbjct: 4 EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRP 63 Query: 291 NHTLKRVIASWQDR 332 N L R+ Q R Sbjct: 64 NWALARLTEKTQRR 77
>UBE4_CAEEL (Q09349) Probable ubiquitin conjugation factor E4| Length = 980 Score = 35.4 bits (80), Expect = 0.11 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Frame = +3 Query: 96 EAMATMEES----PQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQ 263 EA A +EE P+ F PI +M DPV + +G DR IER P Sbjct: 894 EAKAELEEEYDDVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIERHLLSTPNN--PFNRA 951 Query: 264 RVASLDLTPNHTLKRVIASW 323 ++ +L+P+ LK I W Sbjct: 952 PLSHNELSPDSELKAKIQEW 971
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVIA 317 CP+ +EL +DPV V+ G + R I++ + CP + + +T+ RV+A Sbjct: 145 CPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESITD----RKYTINRVLA 200 Query: 318 SWQDRA 335 + +A Sbjct: 201 NLAKKA 206
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVIA 317 CP+ +EL +DPV V+ G + R I++ + CP + + +T+ RV+A Sbjct: 146 CPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESITD----RKYTINRVLA 201 Query: 318 SWQDRA 335 + +A Sbjct: 202 NLAKKA 207
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 34.3 bits (77), Expect = 0.24 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSI-----ERWFFKYGKTTCPATMQRVASLDLTPNHTL 302 CPI +EL+ +P+++ G ++ + I E G+++CP R +L PN L Sbjct: 15 CPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPNRHL 74 Query: 303 KRVI 314 ++ Sbjct: 75 ANIV 78
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 34.3 bits (77), Expect = 0.24 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +3 Query: 108 TMEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLT 287 TM + + FLCPI M++++D + G ++ I K+ CP + + +L Sbjct: 37 TMSDLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHL--RNKSDCPCCGHYLTNSNLF 94 Query: 288 PNHTLKRVIASWQDR 332 PN L +++ DR Sbjct: 95 PNFLLDKLLKKTSDR 109
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 33.5 bits (75), Expect = 0.41 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +3 Query: 135 LCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVI 314 LC + + D VT+ G + RR + + +CP +R +L NHTL ++ Sbjct: 20 LCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKERAVPGELRTNHTLNNLV 79
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVI 314 CPI ++ +PV++ G ++ + I + K G + CP QR +L PN L ++ Sbjct: 16 CPICLDPFVEPVSIECGHSFCQECISQ-VGKGGGSVCPVCRQRFLLKNLRPNRQLANMV 73
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 32.3 bits (72), Expect = 0.90 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRR---SIERWFFKYGKTTCPATMQRVASLDLTPNHTLKR 308 CP+ +E+ ++P+ + G +Y + S+ R + CP Q V S PN +L R Sbjct: 16 CPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDS--ELRCPVCRQEVDSSSSPPNVSLAR 73 Query: 309 VIASWQ 326 VI + Q Sbjct: 74 VIEALQ 79
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 32.3 bits (72), Expect = 0.90 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIER-WFFKYGKTTCPATMQRVASLDLTPNHTLKRV 311 C I ++ DPV G + R I R W G CP + A +L PN L ++ Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSAQRNLRPNRPLAKM 74
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = +3 Query: 108 TMEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKY-GKTTCPATMQRVASLDL 284 T+ E CPI +E+ ++P+ + G +Y + ++ + CP Q V Sbjct: 6 TVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSS 65 Query: 285 TPNHTLKRVI 314 PN +L RVI Sbjct: 66 PPNVSLARVI 75
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 32.0 bits (71), Expect = 1.2 Identities = 33/141 (23%), Positives = 46/141 (32%), Gaps = 12/141 (8%) Frame = +3 Query: 96 EAMATMEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTT---------- 245 EA+A E C I +E +PV+V G ++ R I R + + G T Sbjct: 15 EALALAAELQGEATCSICLEFFREPVSVECGHSFCRACIMRCWERPGAGTGTATRTLPCP 74 Query: 246 --CPATMQRVASLDLTPNHTLKRVIASWQDRAXXXXXXXXXXDALKPMARERLPSVLAGI 419 CP + L PN L V++ + R LP G Sbjct: 75 LPCPQCREPARPSQLRPNRQLAAVVSL--------------------LRRFSLPPTAPGE 114 Query: 420 EGTPFKVTALKGLRLCMAGDQ 482 GTP R G+Q Sbjct: 115 RGTPAVPARAAAARCSQHGEQ 135
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = +3 Query: 108 TMEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKY-GKTTCPATMQRVASLDL 284 T+ E CPI +E+ ++P+ + G +Y + ++ + CP Q V Sbjct: 6 TVPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSSS 65 Query: 285 TPNHTLKRVI 314 PN +L RVI Sbjct: 66 PPNVSLARVI 75
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 31.2 bits (69), Expect = 2.0 Identities = 34/144 (23%), Positives = 51/144 (35%), Gaps = 14/144 (9%) Frame = +3 Query: 96 EAMATMEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTT---------- 245 EA+A E C I +EL +PV+V G ++ R I R + + G + Sbjct: 15 EALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPF 74 Query: 246 ---CPATMQRVASLDLTPNHTLKRVIASWQDRAXXXXXXXXXXDALKPMARERLPSVLAG 416 CP + L PN L V + + A R + G Sbjct: 75 PLPCPQCREPARPSQLRPNRQLAAVATLLR---RFSLPAAAPGEHGSQAAAARAAAARCG 131 Query: 417 IEGTPFKVTAL-KGLRLCMAGDQA 485 G PFK+ G +C+ D+A Sbjct: 132 QHGEPFKLYCQDDGRAICVVCDRA 155
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIER-WFFKYGKTTCPATMQRVASLDLTPNHTLKRV 311 C I ++ DPV G + R I R W G CP + +L PN L ++ Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQRNLRPNRPLAKM 74
>PUR9_LISIN (Q92AP3) Bifunctional purine biosynthesis protein purH [Includes:| Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] Length = 509 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 13/54 (24%) Frame = -1 Query: 542 RHDAAEHLDAVVGHEVVPRRLV-------------PGHAEPEALERGDLEGRAL 420 R D AEH++A+ H++ P LV PG EA+E D+ G ++ Sbjct: 76 RRDTAEHMEAIAAHDIKPIDLVIVNLYPFQETIQKPGVTLEEAIENIDIGGPSM 129
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 30.4 bits (67), Expect = 3.4 Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 10/102 (9%) Frame = +3 Query: 132 FLCPISMELMEDPVTV---------STGVTYDRRSIERWFFKYGKTTCPATMQRVA-SLD 281 F CPI +E + +PVT+ G + R G CP + L Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQEPFPDGLQ 66 Query: 282 LTPNHTLKRVIASWQDRAXXXXXXXXXXDALKPMARERLPSV 407 L NHTL ++ Q A +P A LPSV Sbjct: 67 LRKNHTLSELLQLRQGSGPGSGPGPAPALAPEPSAPSALPSV 108
>CYP4_CAEEL (P52012) Peptidyl-prolyl cis-trans isomerase 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-4) (Cyclophilin mog-6) (Masculinisation of germline protein 6) Length = 523 Score = 30.0 bits (66), Expect = 4.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTC 248 C +S+ EDPV +G +D +I + K+GK C Sbjct: 45 CSLSLLPFEDPVCARSGEIFDLTAIVPYLKKHGKNPC 81
>RNF37_HUMAN (O94941) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (U-box domain-containing protein 5) Length = 541 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/36 (30%), Positives = 25/36 (69%) Frame = +3 Query: 111 MEESPQLFLCPISMELMEDPVTVSTGVTYDRRSIER 218 +++ P+ FL PI++E+M P+ + +G D+ ++E+ Sbjct: 256 IQDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEK 291
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/45 (24%), Positives = 23/45 (51%) Frame = +3 Query: 132 FLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQR 266 F C +++ +P T++ G ++ R + W+ KT CP ++ Sbjct: 32 FSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKT-TCPATMQRVASLDLTPNHTLKRVI 314 C + +E +++PV + G + + I RW+ + CP + L PN L ++ Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMV 88
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKY-GKTTCPATMQRVASLDLTPNHTLKRVI 314 CPI +E+ ++P+ + G +Y + + + CP Q V PN +L RVI Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLPNVSLARVI 75
>CH19_DROVI (P24516) Chorion protein S19| Length = 198 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 167 PRHGVYRRYLRPPEHRAVVLQVR 235 P YRRY PPE+ VVL VR Sbjct: 148 PGQNSYRRYASPPEYTKVVLPVR 170
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/45 (24%), Positives = 22/45 (48%) Frame = +3 Query: 132 FLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQR 266 F C + + +P T++ G ++ R + W+ KT CP ++ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/45 (24%), Positives = 22/45 (48%) Frame = +3 Query: 132 FLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQR 266 F C + + +P T++ G ++ R + W+ KT CP ++ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKT-TCPATMQRVASLDLTPNHTLKRVI 314 C + +E +++PV + G + + I RW+ + CP + L PN L ++ Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMV 88
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +3 Query: 138 CPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKT-TCPATMQRVASLDLTPNHTLKRVI 314 C + +E +++PV + G + + I RW+ + CP + L PN L ++ Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMV 88
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +3 Query: 135 LCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKTTCPATMQRVASLDLTPNHTLKRVI 314 LCPI M++++D + G ++ I K+ CP Q + + L PN L +++ Sbjct: 51 LCPICMQIIKDAFLTACGHSFCYMCIITHL--RNKSDCPCCSQHLTNNQLYPNFLLDKLL 108
>YAV3_XANCV (P14729) Hypothetical 65 kDa avirulence protein in avrBs3 region| Length = 591 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Frame = -1 Query: 461 PEALERGD----LEGRALNAGEHRRQPLPRHRLERVRRA 357 P A GD L G+A+ +HR+QPL HRL+R+ A Sbjct: 31 PAAAIAGDGHHLLRGQAMGLAQHRQQPL--HRLQRLLAA 67
>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog| Length = 492 Score = 28.9 bits (63), Expect = 10.0 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +3 Query: 132 FLCPISMELMEDPVTVS-TGVTYDRRSIERWFFKYG 236 F+C IS EL EDPV +G +DRR I ++ + G Sbjct: 3 FVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENG 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,651,183 Number of Sequences: 219361 Number of extensions: 991350 Number of successful extensions: 3283 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3272 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
