ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart39b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHOSP_NDVB (P24698) Phosphoprotein (Protein P) 30 3.6
2YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4 i... 30 6.1
3C81D1_ARATH (Q9FG65) Cytochrome P450 81D1 (EC 1.14.-.-) 30 6.1
4Y147_HAEIN (P44543) Putative TRAP transporter permease protein H... 29 7.9

>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)|
          Length = 395

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 314 AWTNHGQQEPPAQQN-PRYFTRNNDQPSPPRSS 219
           AW  HG  +PPA Q+ P    R++ QPS P  +
Sbjct: 50  AWEKHGSIQPPASQDTPDRQDRSDKQPSTPEQA 82



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>YKU2_YEAST (P36042) Hypothetical 21.2 kDa protein in TOR2-MNN4 intergenic|
           region
          Length = 193

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +3

Query: 6   PPPIGWLPLLSRVSKLQLP----LHHHSASQSLP 95
           PPP  + PLL   S L LP    LH HS+  SLP
Sbjct: 42  PPPASFFPLLRSSSFLPLPASSFLHLHSSCFSLP 75



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>C81D1_ARATH (Q9FG65) Cytochrome P450 81D1 (EC 1.14.-.-)|
          Length = 502

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 6   PPPIGWLPLLSRVSKLQLPLHHHSASQSLPLD 101
           P P GWLP++  +  L+ P+H    S S  LD
Sbjct: 35  PSPPGWLPIIGHLRLLKPPIHRTLRSFSETLD 66



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>Y147_HAEIN (P44543) Putative TRAP transporter permease protein HI0147|
          Length = 633

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 266 WGFAALEVLAGHGLSRHAEAQSLSFMKIATHLRRCCFLQSFSVVFLYYFY 415
           W FAAL V+A   + R  +AQ+L+F    ++L    F+ S  ++F   F+
Sbjct: 140 WIFAALPVVAILMMFRFIQAQTLNFKTGKSYLPATFFIISAVILFAILFF 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,343,565
Number of Sequences: 219361
Number of extensions: 1017694
Number of successful extensions: 2934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2930
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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