ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39b08 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 295 bits (756), Expect = 5e-80 Identities = 140/159 (88%), Positives = 151/159 (94%) Frame = +3 Query: 108 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 287 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60 Query: 288 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHER 467 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHER Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120 Query: 468 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 DV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLVLVDTP Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTP 159
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 292 bits (748), Expect = 4e-79 Identities = 139/159 (87%), Positives = 150/159 (94%) Frame = +3 Query: 108 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 287 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60 Query: 288 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHER 467 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHER Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120 Query: 468 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 DV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLVLVDTP Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTP 159
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 212 bits (539), Expect = 7e-55 Identities = 94/154 (61%), Positives = 128/154 (83%) Frame = +3 Query: 123 MLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 302 + +FN DG+LEAI+RG + G+L++ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+ Sbjct: 12 LFTFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPI 71 Query: 303 HTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNEL 482 HTTTI EK T KLV E+ H+ QA EPLSTF+ +I+YG+MIDNVVL++TGTLHERD++EL Sbjct: 72 HTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISEL 131 Query: 483 LEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 ++KCHPLG+F S+A+L+V N+ +LY VL+DTP Sbjct: 132 VDKCHPLGLFKSMATLSVVHNVADLYNNVLIDTP 165
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 184 bits (467), Expect = 2e-46 Identities = 85/151 (56%), Positives = 113/151 (74%) Frame = +3 Query: 132 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 311 FNI +G+LE + RG + G+L QADY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 8 FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVS 67 Query: 312 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEK 491 I +K KLV E++HM A EPLS FL +ITYG+MIDN++L++TGTLH+R ++EL+ K Sbjct: 68 VIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPK 127 Query: 492 CHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 CHPLG F+ + ++ VA ELY VLVDTP Sbjct: 128 CHPLGSFEQMEAIHVASTPAELYNAVLVDTP 158
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 181 bits (459), Expect = 1e-45 Identities = 82/153 (53%), Positives = 117/153 (76%) Frame = +3 Query: 126 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 305 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 306 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 485 + I +K K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 486 EKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 KCHPLG F+ + ++ +AQ ELY +LVDTP Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAILVDTP 159
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 181 bits (458), Expect = 2e-45 Identities = 83/151 (54%), Positives = 113/151 (74%) Frame = +3 Query: 132 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 311 FNI G+LE + RG + G+L Q+DY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 6 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65 Query: 312 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEK 491 TI +K KLV E++H+ + EPLSTFL +ITY +MIDN++L++TGTLH+R ++EL+ K Sbjct: 66 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 125 Query: 492 CHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 CHPLG F+ + ++ VA ELY VLVDTP Sbjct: 126 CHPLGSFEQMEAIHVAATPAELYNAVLVDTP 156
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 180 bits (456), Expect = 3e-45 Identities = 81/153 (52%), Positives = 117/153 (76%) Frame = +3 Query: 126 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 305 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 306 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 485 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 486 EKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 KCHPLG F+ + ++ +AQ ELY +LVDTP Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAILVDTP 159
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 180 bits (456), Expect = 3e-45 Identities = 81/153 (52%), Positives = 117/153 (76%) Frame = +3 Query: 126 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 305 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 306 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 485 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 486 EKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 KCHPLG F+ + ++ +AQ ELY +LVDTP Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAILVDTP 159
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 180 bits (456), Expect = 3e-45 Identities = 81/153 (52%), Positives = 117/153 (76%) Frame = +3 Query: 126 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 305 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 306 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 485 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 486 EKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 KCHPLG F+ + ++ +AQ ELY +LVDTP Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAILVDTP 159
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 162 bits (409), Expect = 9e-40 Identities = 77/155 (49%), Positives = 117/155 (75%) Frame = +3 Query: 120 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 299 + LSFN + G++EA+VRG S LL Q Y+NL QCE+L+D ++ LS+T+YG +L N+ S Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60 Query: 300 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNE 479 L ++ I K T KL+DE+ + QA+E LS F+ YITY +MIDN++L++TGT++ +D ++ Sbjct: 61 LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHD 120 Query: 480 LLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 LLE+CHPLG F+++ +L VA N+ ELY +VL++TP Sbjct: 121 LLERCHPLGWFETLPALCVATNVEELYSVVLIETP 155
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 161 bits (408), Expect = 1e-39 Identities = 75/155 (48%), Positives = 109/155 (70%) Frame = +3 Query: 120 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 299 E L FN+++G++E IVRG R+ LLT +Y N+ QCE++DD+K+ L YG +L + P Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60 Query: 300 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNE 479 T+ + K T KLV E++++ A L+ F+ Y+TYG+MIDNV L++TGTLHERD E Sbjct: 61 PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRE 120 Query: 480 LLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 LLE+CHPLG F+++ L VA N+ ELY V+++TP Sbjct: 121 LLERCHPLGWFETMPVLCVATNIEELYNSVMIETP 155
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 159 bits (403), Expect = 4e-39 Identities = 74/156 (47%), Positives = 114/156 (73%), Gaps = 1/156 (0%) Frame = +3 Query: 120 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 299 E + FNI +GF+E +VRG R+GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61 Query: 300 LHTTTIVEK-CTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVN 476 TT+++++ + KL E+ ++ Q++ F+ YITYG+MIDNV L++TGT+H+RD Sbjct: 62 SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKG 121 Query: 477 ELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 E+L++CHPLG FD++ +L+VA ++ LY VLVDTP Sbjct: 122 EILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTP 157
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 131 bits (330), Expect = 1e-30 Identities = 63/152 (41%), Positives = 97/152 (63%), Gaps = 1/152 (0%) Frame = +3 Query: 132 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 311 FN G+LEA+ RG ++G+L +DY NL QCE+L+D+ + + T+YG E S + Sbjct: 5 FNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA-PSV 63 Query: 312 TIVEKCTL-KLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLE 488 ++E+C +L+ +Y ++ + EPL+TF+++I Y MIDNV L+V G + R + LL Sbjct: 64 EVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLR 123 Query: 489 KCHPLGMFDSIASLAVAQNMRELYRLVLVDTP 584 CHPLG FD + ++ VA N EL+ VL+DTP Sbjct: 124 MCHPLGEFDQLGAIEVASNSAELFDAVLIDTP 155
>VATC_DESSY (O06502) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 364 Score = 38.5 bits (88), Expect = 0.014 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 2/144 (1%) Frame = +3 Query: 159 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 338 A ++ + LLT+ +N L + TL + ++L T+Y YL + S +T VEK + Sbjct: 38 ARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEKALER 95 Query: 339 -LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MF 512 L Y+ M + F + + G + N+ +V L ++ + + LG M Sbjct: 96 ALAGTYELMFKILPKRSKGFFELLLEGWDVRNIANVVKAKLANEPASDYVVE---LGTML 152 Query: 513 DSIASLAVAQNMRELYRLVLVDTP 584 + ++A A+ + E+ ++L TP Sbjct: 153 PKVKAMAEAKTLEEIL-VILEGTP 175
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 33.5 bits (75), Expect = 0.46 Identities = 27/90 (30%), Positives = 32/90 (35%) Frame = +2 Query: 11 PHPQARTPSRICXXXXXXXXXXXXXXXSGENQDVLVGDAVVQHPRWVPGGDRAGEPLGTP 190 P P R P R G++Q V +V Q WVPGG LGTP Sbjct: 753 PRPAERQPLR---AATGTWVEAETIPDKGDSQASQVTTSVTQLSTWVPGG-----ALGTP 804 Query: 191 HPSRLQQPLPVRDPRRHQDAPLRHRVRSIP 280 PS +Q +P AP V P Sbjct: 805 TPSVPEQGIPEAREEAQVTAPTNVLVTPAP 834
>VATC_PYRKO (Q5JDR9) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 365 Score = 32.7 bits (73), Expect = 0.79 Identities = 32/142 (22%), Positives = 57/142 (40%) Frame = +3 Query: 159 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 338 A VR + LLT+ +N L + TL + L T+Y L N S I Sbjct: 39 ARVRAMEAKLLTEQRFNELAESRTLQNFVASLEDTDYKETLSN-VSSYSVEEIERALDAS 97 Query: 339 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 518 L Y+ M + F + + + N+ +V L ++ + + P M Sbjct: 98 LAKTYELMFKILPKRSRDFFRLMMEEWDVRNIANVVKAKLANEPASDYIIELGP--MLPK 155 Query: 519 IASLAVAQNMRELYRLVLVDTP 584 + ++A A+ + E+ ++L TP Sbjct: 156 VKAMAEAKTLEEIL-VILEGTP 176
>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 420 Score = 32.3 bits (72), Expect = 1.0 Identities = 23/54 (42%), Positives = 27/54 (50%) Frame = -2 Query: 191 EESRAVPPHDRLQEPIVDVERQHLPRVHLGSHRRKDLGRGEGDREAASCRSGRE 30 EE AVP H +PI DVE + +V +GS GR REAA GRE Sbjct: 271 EEQVAVPHHPDNVKPISDVEGTEINQVFIGSCTN---GRLSDLREAAKYLKGRE 321
>CHRD_MOUSE (Q9Z0E2) Chordin precursor| Length = 948 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 57 LPIPLASAEILPPVRTKMYSWEMLSFNIH 143 LP+PLA A +LPPVR++ LS + H Sbjct: 530 LPVPLAGALVLPPVRSQAAGHAWLSLDTH 558
>VATC_METJA (Q57672) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 381 Score = 32.0 bits (71), Expect = 1.3 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 3/141 (2%) Frame = +3 Query: 150 FLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKC 329 ++ A +R + L A N L + +L+++ L T+YG Y+ + L VEK Sbjct: 39 YVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEKA 98 Query: 330 -TLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG 506 + L D Y + + + L+ I N+ ++ E PLG Sbjct: 99 LDMYLADLYGLIYRISPDSAKKVLKVFAKKFDIKNIKTLIRAKFVGLSAEETYALLIPLG 158 Query: 507 MF--DSIASLAVAQNMRELYR 563 + + LA + + E+ R Sbjct: 159 NIPVEKLKELAEVKTVEEVVR 179
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 30.8 bits (68), Expect = 3.0 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 57 LPIPLASAEILPPVRTKMYSWEMLSFNIH 143 LP+PLA A +LPPV+++ LS + H Sbjct: 534 LPVPLAGALVLPPVKSQAAGHAWLSLDTH 562
>VATC_PYRAB (Q9UXU5) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.8 bits (68), Expect = 3.0 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%) Frame = +3 Query: 159 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 338 A +R + LLT ++ L + ++L + + L T+YG L + S + + L Sbjct: 40 ARIRAMEARLLTDQRFSELAESKSLQNFVVSLEDTDYGKRLTSLQS-YNIEDVERALDLS 98 Query: 339 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MFD 515 LVD + M+ + + + + + N++ +V L + + P G M Sbjct: 99 LVDVIELMVKIMPKRIKGLFEIMLEEWDVRNIINVVKAKLSNMPPQDFI---MPAGKMLQ 155 Query: 516 SIASLAVAQNMREL 557 + ++A A+ M E+ Sbjct: 156 KVKAMAEAKTMEEM 169
>VATC_PYRHO (O57726) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.0 bits (66), Expect = 5.1 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%) Frame = +3 Query: 159 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 338 A +R + LLT ++ L + +TL + + L T+Y P L + S + I L Sbjct: 40 ARIRAMEARLLTDQRFSELAESKTLQNFVVSLEDTDYSPRLASLQS-YNLYEIERALDLS 98 Query: 339 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MFD 515 LVD + M+ + + + + + N+ ++ L + + P G MF Sbjct: 99 LVDLVELMIKIMPKRIRGLFEILLEEWDVRNITNVIKAKLSNLPPQDFI---IPAGRMFP 155 Query: 516 SIASLAVAQNMREL 557 + ++ ++ M E+ Sbjct: 156 KVKAMVESKTMEEI 169
>SIM_DROME (P05709) Protein single-minded| Length = 697 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +2 Query: 170 GEPLGTPHPSRLQ-QPLPVRDPRRHQDAPLRHRVRSIPPERTFSLAHNNNRREVH 331 G+P+G P L P DP + PL+ V +PP S + NNN H Sbjct: 466 GQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSSSSSNNNNGVWH 520
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 884 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = -2 Query: 560 VKLTHILSNCKRC----------NAIKHAQWMAFLQQFIDISFMQCPSNNKDNIIDHVSI 411 +++ H++ N C N ++ Q+ +FLQ+ I+++ CP D +I++ + Sbjct: 781 MQIDHVVKNISECYKSAFKDLSINVTQNMQFHSFLQRIIEMTVSGCPITKCDPLIEY-EV 839 Query: 410 RYVL 399 R+ + Sbjct: 840 RFTI 843
>PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 775 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = +2 Query: 107 DVLVGDAVVQHPRWVPGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQ 244 D LV A + PRW+P G AGE L +PLP R P RH+ Sbjct: 565 DALVMQAAMPDPRWMP-GQAAGERL---------EPLPPR-PGRHR 599
>CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144)| Length = 246 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Frame = +2 Query: 155 GGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAP------LRHRVRSIPPE 286 GGD +P GTP PS+ + D R +AP LRHR ++ PE Sbjct: 36 GGDPLPQPSGTPTPSQPSAAMAATDSMR-GEAPGAETPSLRHRGQAAQPE 84
>COPG_SCHPO (P87140) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 905 Score = 29.3 bits (64), Expect = 8.7 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = +3 Query: 219 QCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDE-YKHMLCQANEPLSTF 395 + E L+ ++ EYGP L++ PSP+ T + +K+V +K L + +T Sbjct: 642 ETEFLNALESVSEFNEYGPVLKSSPSPIELTEQETEFVVKVVKHVFKDHLVVQFQLHNTL 701 Query: 396 LQYITYGHMIDNVVLIVTGTLHERDVNELLEKC 494 + I ++N V++ T + ++L+E+C Sbjct: 702 SEVI-----LENAVVVSTPS-----TDDLVEEC 724 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,761,833 Number of Sequences: 219361 Number of extensions: 2005749 Number of successful extensions: 6440 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 6048 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6428 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
